Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:21:31 (2775323): wrapper (7.7.26015): starting
22:21:31 (2775323): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 22:21:31] Arguments: --nthreads 12
[2025-10-13 22:21:31] Threads: 12
[2025-10-13 22:21:31] Checking for CVMFS
[2025-10-13 22:21:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 22:21:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 22:21:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 22:21:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 22:21:31] 2.13.1.0 2584362 13804 85396 151672 2 56 2942791 4097025 0 130560 0 24570919 99.996 474784 4194 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-10-13 22:21:31] CVMFS is ok
[2025-10-13 22:21:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 22:21:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 22:21:31] Further information can be found at the LHC@home message board.
[2025-10-13 22:21:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 22:21:31] Checking for apptainer binary...
[2025-10-13 22:21:31] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-10-13 22:21:31] apptainer is not installed, using version from CVMFS
[2025-10-13 22:21:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 22:21:31] pckelar1.cern.ch
[2025-10-13 22:21:31] apptainer works
[2025-10-13 22:21:31] Set ATHENA_PROC_NUMBER=12
[2025-10-13 22:21:31] Set ATHENA_CORE_NUMBER=12
[2025-10-13 22:21:31] Starting ATLAS job with PandaID=6840750108
[2025-10-13 22:21:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 23:07:47]  *** The last 200 lines of the pilot log: ***
[2025-10-13 23:07:47] 2025-10-13 21:06:33,001 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 23:07:47] 2025-10-13 21:06:33,001 | INFO     | summary of transferred files:
[2025-10-13 23:07:47] 2025-10-13 21:06:33,001 | INFO     |  -- lfn=log.46676269._089487.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 23:07:47] 2025-10-13 21:06:33,001 | INFO     | stage-out finished correctly
[2025-10-13 23:07:47] 2025-10-13 21:06:33,404 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 23:07:47] 2025-10-13 21:06:33,519 | INFO     | time since job start (2695s) is within the limit (172800.0s)
[2025-10-13 23:07:47] 2025-10-13 21:06:35,521 | INFO     | time since job start (2697s) is within the limit (172800.0s)
[2025-10-13 23:07:47] 2025-10-13 21:06:36,221 | INFO     | job 6840750108 has state=finished
[2025-10-13 23:07:47] 2025-10-13 21:06:36,221 | INFO     | preparing for final server update for job 6840750108 in state='finished'
[2025-10-13 23:07:47] 2025-10-13 21:06:36,222 | INFO     | this job has now completed (state=finished)
[2025-10-13 23:07:47] 2025-10-13 21:06:36,222 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 23:07:47] 2025-10-13 21:06:36,222 | INFO     | log transfer has been attempted: DONE
[2025-10-13 23:07:47] 2025-10-13 21:06:36,222 | INFO     | job 6840750108 has finished - writing final server update
[2025-10-13 23:07:47] 2025-10-13 21:06:36,222 | INFO     | total number of processed events: 400 (read)
[2025-10-13 23:07:47] 2025-10-13 21:06:36,223 | INFO     | executing command: lscpu
[2025-10-13 23:07:47] 2025-10-13 21:06:36,244 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 23:07:47] 2025-10-13 21:06:36,951 [wrapper] supervise_pilot (15 min periods counter: 4)
[2025-10-13 23:07:47] 2025-10-13 21:06:37,527 | INFO     | time since job start (2699s) is within the limit (172800.0s)
[2025-10-13 23:07:47] 2025-10-13 21:06:38,660 | WARNING  | process 2786628 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 23:07:47] 2025-10-13 21:06:38,660 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6840750108/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 23:07:47] 2025-10-13 21:06:38,660 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6840750108/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 23:07:47] 2025-10-13 21:06:38,661 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-13 23:07:47] 2025-10-13 21:06:38,661 | WARNING  | maxPSS not found in memory monitor output
[2025-10-13 23:07:47] 2025-10-13 21:06:38,661 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4359989 B
[2025-10-13 23:07:47] 2025-10-13 21:06:38,661 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15870 B
[2025-10-13 23:07:47] 2025-10-13 21:06:38,661 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-13 23:07:47] 2025-10-13 21:06:39,532 | INFO     | time since job start (2701s) is within the limit (172800.0s)
[2025-10-13 23:07:47] 2025-10-13 21:06:40,629 | INFO     | PID=2779168 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 23:07:47] 2025-10-13 21:06:40,768 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 23:07:47] 2025-10-13 21:06:40,773 | INFO     | found 20 cores (10 cores per socket, 2 sockets) , CPU MHz: 2413.0621
[2025-10-13 23:07:47] 2025-10-13 21:06:40,776 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6840750108/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 23:07:47] 2025-10-13 21:06:40,777 | INFO     | extracted standard info from prmon json
[2025-10-13 23:07:47] 2025-10-13 21:06:40,777 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 23:07:47] 2025-10-13 21:06:40,777 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 23:07:47] 2025-10-13 21:06:40,778 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 23:07:47] 2025-10-13 21:06:40,778 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 23:07:47] 2025-10-13 21:06:40,779 | INFO     | fitting pss+swap vs Time
[2025-10-13 23:07:47] 2025-10-13 21:06:40,779 | INFO     | sum of square deviations: 15695178.0
[2025-10-13 23:07:47] 2025-10-13 21:06:40,779 | INFO     | sum of deviations: 347725498.0
[2025-10-13 23:07:47] 2025-10-13 21:06:40,779 | INFO     | mean x: 1760388326.0
[2025-10-13 23:07:47] 2025-10-13 21:06:40,779 | INFO     | mean y: 3164799.5945945946
[2025-10-13 23:07:47] 2025-10-13 21:06:40,779 | INFO     | -- intersect: -38998107268.28105
[2025-10-13 23:07:47] 2025-10-13 21:06:40,779 | INFO     | intersect: -38998107268.28105
[2025-10-13 23:07:47] 2025-10-13 21:06:40,779 | INFO     | chi2: 0.0005689697251477953
[2025-10-13 23:07:47] 2025-10-13 21:06:40,779 | INFO     | -- intersect: -38998107268.28105
[2025-10-13 23:07:47] 2025-10-13 21:06:40,780 | INFO     | current memory leak: 22.15 B/s (using 37 data points, chi2=0.00)
[2025-10-13 23:07:47] 2025-10-13 21:06:40,780 | INFO     | sufficient remaining disk space (828191539200 B)
[2025-10-13 23:07:47] 2025-10-13 21:06:40,780 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-13 23:07:47] 2025-10-13 21:06:40,780 | INFO     | could have reported an average CPU frequency of 2504 MHz (5 samples)
[2025-10-13 23:07:47] 2025-10-13 21:06:40,781 | INFO     | ..............................
[2025-10-13 23:07:47] 2025-10-13 21:06:40,781 | INFO     | . Timing measurements:
[2025-10-13 23:07:47] 2025-10-13 21:06:40,781 | INFO     | . get job = 0 s
[2025-10-13 23:07:47] 2025-10-13 21:06:40,781 | INFO     | . initial setup = 1 s
[2025-10-13 23:07:47] 2025-10-13 21:06:40,781 | INFO     | . payload setup = 6 s
[2025-10-13 23:07:47] 2025-10-13 21:06:40,781 | INFO     | . stage-in = 0 s
[2025-10-13 23:07:47] 2025-10-13 21:06:40,781 | INFO     | . payload execution = 2670 s
[2025-10-13 23:07:47] 2025-10-13 21:06:40,781 | INFO     | . stage-out = 0 s
[2025-10-13 23:07:47] 2025-10-13 21:06:40,781 | INFO     | . log creation = 0 s
[2025-10-13 23:07:47] 2025-10-13 21:06:40,781 | INFO     | ..............................
[2025-10-13 23:07:47] 2025-10-13 21:06:40,832 | INFO     | 
[2025-10-13 23:07:47] 2025-10-13 21:06:40,832 | INFO     | size of work directory /var/lib/boinc/slots/0/PanDA_Pilot-6840750108: 4644182 B (within 2537553920 B limit)
[2025-10-13 23:07:47] 2025-10-13 21:06:40,832 | INFO     | job summary report
[2025-10-13 23:07:47] 2025-10-13 21:06:40,832 | INFO     | --------------------------------------------------
[2025-10-13 23:07:47] 2025-10-13 21:06:40,832 | INFO     | pfn file=/var/lib/boinc/slots/0/PanDA_Pilot-6840750108/HITS.46676269._089487.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-13 23:07:47] 2025-10-13 21:06:40,832 | INFO     | PanDA job id: 6840750108
[2025-10-13 23:07:47] 2025-10-13 21:06:40,832 | INFO     | total size of present files: 0 B (workdir size: 4644182 B)
[2025-10-13 23:07:47] 2025-10-13 21:06:40,832 | INFO     | task id: 46676269
[2025-10-13 23:07:47] 2025-10-13 21:06:40,832 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/0/PanDA_Pilot-6840750108/HITS.46676269._089487.pool.root.1 since it does not exist
[2025-10-13 23:07:47] 2025-10-13 21:06:40,832 | INFO     | errors: (none)
[2025-10-13 23:07:47] 2025-10-13 21:06:40,833 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 23:07:47] 2025-10-13 21:06:40,833 | INFO     | pilot state: finished 
[2025-10-13 23:07:47] 2025-10-13 21:06:40,833 | INFO     | transexitcode: 0
[2025-10-13 23:07:47] 2025-10-13 21:06:40,833 | INFO     | exeerrorcode: 0
[2025-10-13 23:07:47] 2025-10-13 21:06:40,833 | INFO     | exeerrordiag: 
[2025-10-13 23:07:47] 2025-10-13 21:06:40,833 | INFO     | exitcode: 0
[2025-10-13 23:07:47] 2025-10-13 21:06:40,833 | INFO     | exitmsg: OK
[2025-10-13 23:07:47] 2025-10-13 21:06:40,833 | INFO     | cpuconsumptiontime: 28963 s
[2025-10-13 23:07:47] 2025-10-13 21:06:40,833 | INFO     | nevents: 400
[2025-10-13 23:07:47] 2025-10-13 21:06:40,833 | INFO     | neventsw: 0
[2025-10-13 23:07:47] 2025-10-13 21:06:40,833 | INFO     | pid: 2786628
[2025-10-13 23:07:47] 2025-10-13 21:06:40,833 | INFO     | pgrp: 2786628
[2025-10-13 23:07:47] 2025-10-13 21:06:40,833 | INFO     | corecount: 12
[2025-10-13 23:07:47] 2025-10-13 21:06:40,833 | INFO     | event service: False
[2025-10-13 23:07:47] 2025-10-13 21:06:40,833 | INFO     | sizes: {0: 2348856, 3: 2349118, 10: 2349146, 2679: 2374413, 2680: 2383467, 2688: 2383637}
[2025-10-13 23:07:47] 2025-10-13 21:06:40,833 | INFO     | --------------------------------------------------
[2025-10-13 23:07:47] 2025-10-13 21:06:40,833 | INFO     | 
[2025-10-13 23:07:47] 2025-10-13 21:06:40,834 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-13 23:07:47] 2025-10-13 21:06:40,847 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 23:07:47] 2025-10-13 21:06:40,847 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 23:07:47] 2025-10-13 21:06:40,847 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 23:07:47] 2025-10-13 21:06:40,847 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 23:07:47] 2025-10-13 21:06:40,847 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 23:07:47] 2025-10-13 21:06:40,848 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 23:07:47] 2025-10-13 21:06:40,848 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 23:07:47] 2025-10-13 21:06:40,848 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 23:07:47] 2025-10-13 21:06:40,848 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 23:07:47] 2025-10-13 21:06:40,848 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 23:07:47] 2025-10-13 21:06:40,848 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 23:07:47] 2025-10-13 21:06:40,848 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 23:07:47] 2025-10-13 21:06:40,848 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 23:07:47] 2025-10-13 21:06:40,848 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 23:07:47] 2025-10-13 21:06:40,848 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 23:07:47] 2025-10-13 21:06:40,848 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 23:07:47] 2025-10-13 21:06:40,848 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 23:07:47] 2025-10-13 21:06:40,849 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 23:07:47] 2025-10-13 21:06:40,849 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 23:07:47] 2025-10-13 21:06:40,849 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 23:07:47] 2025-10-13 21:06:40,849 | INFO     | job 6840750108 has completed (purged errors)
[2025-10-13 23:07:47] 2025-10-13 21:06:40,849 | INFO     | overall cleanup function is called
[2025-10-13 23:07:47] 2025-10-13 21:06:40,904 | INFO     | number of running child processes to parent process 2786628: 1
[2025-10-13 23:07:47] 2025-10-13 21:06:40,904 | INFO     | maximum number of monitored processes: 6
[2025-10-13 23:07:47] 2025-10-13 21:06:40,904 | INFO     | aborting job monitoring since job object (job id=6840750108) has expired
[2025-10-13 23:07:47] 2025-10-13 21:06:41,856 | INFO     | --- collectZombieJob: --- 10, [2786628]
[2025-10-13 23:07:47] 2025-10-13 21:06:41,857 | INFO     | zombie collector waiting for pid 2786628
[2025-10-13 23:07:47] 2025-10-13 21:06:41,857 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 23:07:47] 2025-10-13 21:06:41,857 | INFO     | collected zombie processes
[2025-10-13 23:07:47] 2025-10-13 21:06:41,857 | INFO     | will attempt to kill all subprocesses of pid=2786628
[2025-10-13 23:07:47] 2025-10-13 21:06:41,929 | INFO     | process IDs to be killed: [2786628] (in reverse order)
[2025-10-13 23:07:47] 2025-10-13 21:06:41,959 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 23:07:47] 2025-10-13 21:06:41,959 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 23:07:47] 2025-10-13 21:06:41,961 | INFO     | did not find any defunct processes belonging to 2786628
[2025-10-13 23:07:47] 2025-10-13 21:06:41,962 | INFO     | did not find any defunct processes belonging to 2786628
[2025-10-13 23:07:47] 2025-10-13 21:06:41,962 | INFO     | ready for new job
[2025-10-13 23:07:47] 2025-10-13 21:06:41,963 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 23:07:47] 2025-10-13 21:06:41,964 | INFO     | ***************************************
[2025-10-13 23:07:47] 2025-10-13 21:06:41,964 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 23:07:47] 2025-10-13 21:06:41,964 | INFO     | ***************************************
[2025-10-13 23:07:47] 2025-10-13 21:06:41,964 | INFO     | 
[2025-10-13 23:07:47] 2025-10-13 21:06:41,965 | INFO     | architecture information:
[2025-10-13 23:07:47] 2025-10-13 21:06:41,965 | INFO     | executing command: cat /etc/os-release
[2025-10-13 23:07:47] 2025-10-13 21:06:41,974 | INFO     | cat /etc/os-release:
[2025-10-13 23:07:47] NAME="CentOS Linux"
[2025-10-13 23:07:47] VERSION="7 (Core)"
[2025-10-13 23:07:47] ID="centos"
[2025-10-13 23:07:47] ID_LIKE="rhel fedora"
[2025-10-13 23:07:47] VERSION_ID="7"
[2025-10-13 23:07:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 23:07:47] ANSI_COLOR="0;31"
[2025-10-13 23:07:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 23:07:47] HOME_URL="https://www.centos.org/"
[2025-10-13 23:07:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 23:07:47] 
[2025-10-13 23:07:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 23:07:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 23:07:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 23:07:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 23:07:47] 
[2025-10-13 23:07:47] 2025-10-13 21:06:41,974 | INFO     | ***************************************
[2025-10-13 23:07:47] 2025-10-13 21:06:42,477 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-13 23:07:47] 2025-10-13 21:06:42,490 | INFO     | sufficient remaining disk space (828196782080 B)
[2025-10-13 23:07:47] 2025-10-13 21:06:42,490 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 23:07:47] 2025-10-13 21:06:42,490 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 23:07:47] 2025-10-13 21:06:42,490 | INFO     | update_server=False
[2025-10-13 23:07:47] 2025-10-13 21:06:42,490 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 23:07:47] 2025-10-13 21:06:42,491 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 23:07:47] 2025-10-13 21:06:42,491 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 23:07:47] 2025-10-13 21:06:42,491 | INFO     | aborting loop
[2025-10-13 23:07:47] 2025-10-13 21:06:42,855 | INFO     | all data control threads have been joined
[2025-10-13 23:07:47] 2025-10-13 21:06:43,494 | INFO     | [job] job monitor thread has finished
[2025-10-13 23:07:47] 2025-10-13 21:06:43,495 | INFO     | [job] queue monitor thread has finished
[2025-10-13 23:07:47] 2025-10-13 21:06:43,496 | INFO     | [job] retrieve thread has finished
[2025-10-13 23:07:47] 2025-10-13 21:06:43,558 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 23:07:47] 2025-10-13 21:06:43,631 | INFO     | all job control threads have been joined
[2025-10-13 23:07:47] 2025-10-13 21:06:43,731 | INFO     | [data] copytool_in thread has finished
[2025-10-13 23:07:47] 2025-10-13 21:06:43,860 | INFO     | [data] control thread has finished
[2025-10-13 23:07:47] 2025-10-13 21:06:43,959 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 23:07:47] 2025-10-13 21:06:43,980 | INFO     | all payload control threads have been joined
[2025-10-13 23:07:47] 2025-10-13 21:06:44,037 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 23:07:47] 2025-10-13 21:06:44,332 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 23:07:47] 2025-10-13 21:06:44,499 | INFO     | [job] validate thread has finished
[2025-10-13 23:07:47] 2025-10-13 21:06:44,559 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 23:07:47] 2025-10-13 21:06:44,633 | INFO     | [job] control thread has finished
[2025-10-13 23:07:47] 2025-10-13 21:06:44,661 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 23:07:47] 2025-10-13 21:06:44,772 | INFO     | [payload] validate_post thread has finished
[2025-10-13 23:07:47] 2025-10-13 21:06:44,940 | INFO     | [payload] failed_post thread has finished
[2025-10-13 23:07:47] 2025-10-13 21:06:44,985 | INFO     | [payload] control thread has finished
[2025-10-13 23:07:47] 2025-10-13 21:06:45,564 | INFO     | [data] copytool_out thread has finished
[2025-10-13 23:07:47] 2025-10-13 21:06:47,965 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 23:07:47] 2025-10-13 21:07:12,806 | INFO     | PID=2779168 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 23:07:47] 2025-10-13 21:07:12,807 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 23:07:47] 2025-10-13 21:07:12,807 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 23:07:47] 2025-10-13 21:07:12,807 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 23:07:47] 2025-10-13 21:07:42,111 | INFO     | [monitor] cgroup control has ended
[2025-10-13 23:07:47] 2025-10-13 21:07:42,188 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140408238393152)>', '<ExcThread(monitor, started 140407547606784)>']
[2025-10-13 23:07:47] 2025-10-13 21:07:42,956 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 23:07:47] 2025-10-13 21:07:42,956 | INFO     | [monitor] control thread has ended
[2025-10-13 23:07:47] 2025-10-13 21:07:47,213 | INFO     | all workflow threads have been joined
[2025-10-13 23:07:47] 2025-10-13 21:07:47,213 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 23:07:47] 2025-10-13 21:07:47,214 | INFO     | traces error code: 0
[2025-10-13 23:07:47] 2025-10-13 21:07:47,214 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 23:07:47] 2025-10-13 21:07:47,288 [wrapper] ==== pilot stdout END ====
[2025-10-13 23:07:47] 2025-10-13 21:07:47,291 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 23:07:47] 2025-10-13 21:07:47,293 [wrapper] pilotpid: 2779168
[2025-10-13 23:07:47] 2025-10-13 21:07:47,295 [wrapper] Pilot exit status: 0
[2025-10-13 23:07:47] 2025-10-13 21:07:47,304 [wrapper] pandaids: 6840750108
[2025-10-13 23:07:47] 2025-10-13 21:07:47,329 [wrapper] cleanup supervisor_pilot 2800055 2779169
[2025-10-13 23:07:47] 2025-10-13 21:07:47,331 [wrapper] Test setup, not cleaning
[2025-10-13 23:07:47] 2025-10-13 21:07:47,334 [wrapper] apfmon messages muted
[2025-10-13 23:07:47] 2025-10-13 21:07:47,336 [wrapper] ==== wrapper stdout END ====
[2025-10-13 23:07:47] 2025-10-13 21:07:47,338 [wrapper] ==== wrapper stderr END ====
[2025-10-13 23:07:47]  *** Error codes and diagnostics ***
[2025-10-13 23:07:47]     "exeErrorCode": 0,
[2025-10-13 23:07:47]     "exeErrorDiag": "",
[2025-10-13 23:07:47]     "pilotErrorCode": 0,
[2025-10-13 23:07:47]     "pilotErrorDiag": "",
[2025-10-13 23:07:47]  *** Listing of results directory ***
[2025-10-13 23:07:47] total 416592
[2025-10-13 23:07:47] -rw-r--r-- 1 boinc boinc    557409 Oct 12 22:55 pilot3.tar.gz
[2025-10-13 23:07:47] -rw-r--r-- 1 boinc boinc      5112 Oct 12 23:07 queuedata.json
[2025-10-13 23:07:47] -rwx------ 1 boinc boinc     36292 Oct 12 23:07 runpilot2-wrapper.sh
[2025-10-13 23:07:47] -rw-r--r-- 1 boinc boinc       100 Oct 13 22:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 23:07:47] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 22:21 run_atlas
[2025-10-13 23:07:47] -rw-r--r-- 1 boinc boinc       105 Oct 13 22:21 job.xml
[2025-10-13 23:07:47] -rw-r--r-- 2 boinc boinc     15120 Oct 13 22:21 start_atlas.sh
[2025-10-13 23:07:47] drwxrwx--x 2 boinc boinc        68 Oct 13 22:21 shared
[2025-10-13 23:07:47] -rw-r--r-- 2 boinc boinc    569676 Oct 13 22:21 input.tar.gz
[2025-10-13 23:07:47] -rw-r--r-- 1 boinc boinc      6532 Oct 13 22:21 init_data.xml
[2025-10-13 23:07:47] -rw-r--r-- 2 boinc boinc 223034393 Oct 13 22:21 EVNT.46676267._004769.pool.root.1
[2025-10-13 23:07:47] -rw-r--r-- 1 boinc boinc         0 Oct 13 22:21 boinc_lockfile
[2025-10-13 23:07:47] -rw-r--r-- 1 boinc boinc      2549 Oct 13 22:21 pandaJob.out
[2025-10-13 23:07:47] -rw------- 1 boinc boinc    972799 Oct 13 22:21 agis_schedconf.cvmfs.json
[2025-10-13 23:07:47] -rw------- 1 boinc boinc   1560580 Oct 13 22:21 agis_ddmendpoints.agis.ALL.json
[2025-10-13 23:07:47] drwx------ 5 boinc boinc      4096 Oct 13 22:21 pilot3
[2025-10-13 23:07:47] -rw------- 1 boinc boinc 198108910 Oct 13 23:06 HITS.46676269._089487.pool.root.1
[2025-10-13 23:07:47] -rw-r--r-- 1 boinc boinc       529 Oct 13 23:06 boinc_task_state.xml
[2025-10-13 23:07:47] -rw------- 1 boinc boinc      1020 Oct 13 23:06 memory_monitor_summary.json
[2025-10-13 23:07:47] -rw------- 1 boinc boinc    361715 Oct 13 23:06 log.46676269._089487.job.log.tgz.1
[2025-10-13 23:07:47] -rw------- 1 boinc boinc      7798 Oct 13 23:06 heartbeat.json
[2025-10-13 23:07:47] -rw------- 1 boinc boinc        95 Oct 13 23:07 pilot_heartbeat.json
[2025-10-13 23:07:47] -rw-r--r-- 1 boinc boinc      8192 Oct 13 23:07 boinc_mmap_file
[2025-10-13 23:07:47] -rw-r--r-- 1 boinc boinc        27 Oct 13 23:07 wrapper_checkpoint.txt
[2025-10-13 23:07:47] -rw------- 1 boinc boinc      4749 Oct 13 23:07 pilotlog.txt
[2025-10-13 23:07:47] -rw------- 1 boinc boinc    417968 Oct 13 23:07 log.46676269._089487.job.log.1
[2025-10-13 23:07:47] -rw------- 1 boinc boinc       357 Oct 13 23:07 output.list
[2025-10-13 23:07:47] -rw-r--r-- 1 boinc boinc       620 Oct 13 23:07 runtime_log
[2025-10-13 23:07:47] -rw------- 1 boinc boinc    798720 Oct 13 23:07 result.tar.gz
[2025-10-13 23:07:47] -rw-r--r-- 1 boinc boinc      8727 Oct 13 23:07 runtime_log.err
[2025-10-13 23:07:47] -rw------- 1 boinc boinc       653 Oct 13 23:07 95BLDmrSIS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmr3UMDmTRZlMn.diag
[2025-10-13 23:07:47] -rw-r--r-- 1 boinc boinc     22608 Oct 13 23:07 stderr.txt
[2025-10-13 23:07:47] HITS file was successfully produced:
[2025-10-13 23:07:47] -rw------- 1 boinc boinc 198108910 Oct 13 23:06 shared/HITS.pool.root.1
[2025-10-13 23:07:47]  *** Contents of shared directory: ***
[2025-10-13 23:07:47] total 412632
[2025-10-13 23:07:47] -rw-r--r-- 2 boinc boinc     15120 Oct 13 22:21 start_atlas.sh
[2025-10-13 23:07:47] -rw-r--r-- 2 boinc boinc    569676 Oct 13 22:21 input.tar.gz
[2025-10-13 23:07:47] -rw-r--r-- 2 boinc boinc 223034393 Oct 13 22:21 ATLAS.root_0
[2025-10-13 23:07:47] -rw------- 1 boinc boinc 198108910 Oct 13 23:06 HITS.pool.root.1
[2025-10-13 23:07:47] -rw------- 1 boinc boinc    798720 Oct 13 23:07 result.tar.gz
23:07:48 (2775323): run_atlas exited; CPU time 28973.346487
23:07:48 (2775323): called boinc_finish(0)

</stderr_txt>
]]>

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