Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:19:01 (2488): wrapper (7.7.26015): starting
00:19:01 (2488): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 00:19:01] Arguments: --nthreads 8
[2025-10-13 00:19:01] Threads: 8
[2025-10-13 00:19:01] Checking for CVMFS
[2025-10-13 00:19:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:19:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:19:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:19:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:19:01] 2.11.2.0 25047 53700 113180 151649 1 57 15745075 20275200 917 130560 0 64763782 99.980 2425585 24097 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:19:01] CVMFS is ok
[2025-10-13 00:19:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:19:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:19:01] Further information can be found at the LHC@home message board.
[2025-10-13 00:19:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:19:01] Checking for apptainer binary...
[2025-10-13 00:19:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:19:01] Running /usr/bin/apptainer --version
[2025-10-13 00:19:01] apptainer version 1.3.2-1.el7
[2025-10-13 00:19:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:19:02] c-205-37.aglt2.org
[2025-10-13 00:19:02] apptainer works
[2025-10-13 00:19:02] Set ATHENA_PROC_NUMBER=8
[2025-10-13 00:19:02] Set ATHENA_CORE_NUMBER=8
[2025-10-13 00:19:02] Starting ATLAS job with PandaID=6840969196
[2025-10-13 00:19:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:22:26]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:22:26]  protocol_id=None
[2025-10-13 01:22:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 01:22:26]  replicas=None
[2025-10-13 01:22:26]  scope=mc23_13p6TeV
[2025-10-13 01:22:26]  status=None
[2025-10-13 01:22:26]  status_code=0
[2025-10-13 01:22:26]  storage_token=
[2025-10-13 01:22:26]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840969196/log.46676269._092197.job.log.tgz.1
[2025-10-13 01:22:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4f/8a/log.46676269._092197.job.log.tgz.1
[2025-10-13 01:22:26]  workdir=None
[2025-10-13 01:22:26] ]
[2025-10-13 01:22:26] 2025-10-13 05:21:34,038 | INFO     | transferring file log.46676269._092197.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840969196/log.46676269._092197.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 01:22:26] 2025-10-13 05:21:34,038 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840969196/log.46676269._092197.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._092197.job
[2025-10-13 01:22:26] 2025-10-13 05:21:34,060 | INFO     | adding to output.list: log.46676269._092197.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4f/8a/log.46676269._092197.job.log.tg
[2025-10-13 01:22:26] 2025-10-13 05:21:34,061 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 01:22:26] 2025-10-13 05:21:34,061 | INFO     | summary of transferred files:
[2025-10-13 01:22:26] 2025-10-13 05:21:34,061 | INFO     |  -- lfn=log.46676269._092197.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 01:22:26] 2025-10-13 05:21:34,062 | INFO     | stage-out finished correctly
[2025-10-13 01:22:26] 2025-10-13 05:21:34,131 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 01:22:26] 2025-10-13 05:21:34,176 | INFO     | monitor loop #282: job 0:6840969196 is in state 'finished'
[2025-10-13 01:22:26] 2025-10-13 05:21:34,181 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:22:26] 2025-10-13 05:21:34,214 | INFO     | job 6840969196 has state=finished
[2025-10-13 01:22:26] 2025-10-13 05:21:34,215 | INFO     | preparing for final server update for job 6840969196 in state='finished'
[2025-10-13 01:22:26] 2025-10-13 05:21:34,215 | INFO     | this job has now completed (state=finished)
[2025-10-13 01:22:26] 2025-10-13 05:21:34,215 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 01:22:26] 2025-10-13 05:21:34,215 | INFO     | log transfer has been attempted: DONE
[2025-10-13 01:22:26] 2025-10-13 05:21:34,216 | INFO     | job 6840969196 has finished - writing final server update
[2025-10-13 01:22:26] 2025-10-13 05:21:34,216 | INFO     | total number of processed events: 400 (read)
[2025-10-13 01:22:26] 2025-10-13 05:21:34,217 | INFO     | executing command: lscpu
[2025-10-13 01:22:26] 2025-10-13 05:21:34,250 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 01:22:26] 2025-10-13 05:21:34,569 | INFO     | time since job start (3740s) is within the limit (172800.0s)
[2025-10-13 01:22:26] 2025-10-13 05:21:36,575 | INFO     | time since job start (3742s) is within the limit (172800.0s)
[2025-10-13 01:22:26] 2025-10-13 05:21:36,695 | INFO     | monitor loop #283: job 0:6840969196 is in state 'finished'
[2025-10-13 01:22:26] 2025-10-13 05:21:36,695 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:22:26] 2025-10-13 05:21:37,718 | INFO     | PID=6320 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 01:22:26] 2025-10-13 05:21:37,718 | INFO     | .. there are 2 such processes running
[2025-10-13 01:22:26] 2025-10-13 05:21:38,521 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 01:22:26] 2025-10-13 05:21:38,525 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2043.813625
[2025-10-13 01:22:26] 2025-10-13 05:21:38,528 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840969196/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 01:22:26] 2025-10-13 05:21:38,529 | INFO     | extracted standard info from prmon json
[2025-10-13 01:22:26] 2025-10-13 05:21:38,530 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 01:22:26] 2025-10-13 05:21:38,530 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 01:22:26] 2025-10-13 05:21:38,530 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:22:26] 2025-10-13 05:21:38,530 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:22:26] 2025-10-13 05:21:38,532 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:22:26] 2025-10-13 05:21:38,532 | INFO     | sum of square deviations: 48810217.5
[2025-10-13 01:22:26] 2025-10-13 05:21:38,533 | INFO     | sum of deviations: -3555332113.0
[2025-10-13 01:22:26] 2025-10-13 05:21:38,533 | INFO     | mean x: 1760331100.5
[2025-10-13 01:22:26] 2025-10-13 05:21:38,533 | INFO     | mean y: 2723439.1481481483
[2025-10-13 01:22:26] 2025-10-13 05:21:38,533 | INFO     | -- intersect: 128225091862.7324
[2025-10-13 01:22:26] 2025-10-13 05:21:38,533 | INFO     | intersect: 128225091862.7324
[2025-10-13 01:22:26] 2025-10-13 05:21:38,534 | INFO     | chi2: 0.014868540155208387
[2025-10-13 01:22:26] 2025-10-13 05:21:38,534 | INFO     | -- intersect: 128225091862.7324
[2025-10-13 01:22:26] 2025-10-13 05:21:38,534 | INFO     | current memory leak: -72.84 B/s (using 54 data points, chi2=0.01)
[2025-10-13 01:22:26] 2025-10-13 05:21:38,534 | INFO     | could have reported an average CPU frequency of 2135 MHz (6 samples)
[2025-10-13 01:22:26] 2025-10-13 05:21:38,535 | INFO     | ..............................
[2025-10-13 01:22:26] 2025-10-13 05:21:38,535 | INFO     | . Timing measurements:
[2025-10-13 01:22:26] 2025-10-13 05:21:38,535 | INFO     | . get job = 0 s
[2025-10-13 01:22:26] 2025-10-13 05:21:38,535 | INFO     | . initial setup = 2 s
[2025-10-13 01:22:26] 2025-10-13 05:21:38,535 | INFO     | . payload setup = 5 s
[2025-10-13 01:22:26] 2025-10-13 05:21:38,535 | INFO     | . stage-in = 0 s
[2025-10-13 01:22:26] 2025-10-13 05:21:38,535 | INFO     | . payload execution = 3713 s
[2025-10-13 01:22:26] 2025-10-13 05:21:38,535 | INFO     | . stage-out = 0 s
[2025-10-13 01:22:26] 2025-10-13 05:21:38,536 | INFO     | . log creation = 0 s
[2025-10-13 01:22:26] 2025-10-13 05:21:38,536 | INFO     | ..............................
[2025-10-13 01:22:26] 2025-10-13 05:21:38,617 | INFO     | 
[2025-10-13 01:22:26] 2025-10-13 05:21:38,617 | INFO     | job summary report
[2025-10-13 01:22:26] 2025-10-13 05:21:38,617 | INFO     | --------------------------------------------------
[2025-10-13 01:22:26] 2025-10-13 05:21:38,617 | INFO     | PanDA job id: 6840969196
[2025-10-13 01:22:26] 2025-10-13 05:21:38,617 | INFO     | task id: 46676269
[2025-10-13 01:22:26] 2025-10-13 05:21:38,617 | INFO     | errors: (none)
[2025-10-13 01:22:26] 2025-10-13 05:21:38,618 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:22:26] 2025-10-13 05:21:38,618 | INFO     | pilot state: finished 
[2025-10-13 01:22:26] 2025-10-13 05:21:38,618 | INFO     | transexitcode: 0
[2025-10-13 01:22:26] 2025-10-13 05:21:38,618 | INFO     | exeerrorcode: 0
[2025-10-13 01:22:26] 2025-10-13 05:21:38,618 | INFO     | exeerrordiag: 
[2025-10-13 01:22:26] 2025-10-13 05:21:38,618 | INFO     | exitcode: 0
[2025-10-13 01:22:26] 2025-10-13 05:21:38,618 | INFO     | exitmsg: OK
[2025-10-13 01:22:26] 2025-10-13 05:21:38,618 | INFO     | cpuconsumptiontime: 27696 s
[2025-10-13 01:22:26] 2025-10-13 05:21:38,619 | INFO     | nevents: 400
[2025-10-13 01:22:26] 2025-10-13 05:21:38,619 | INFO     | neventsw: 0
[2025-10-13 01:22:26] 2025-10-13 05:21:38,619 | INFO     | pid: 12684
[2025-10-13 01:22:26] 2025-10-13 05:21:38,619 | INFO     | pgrp: 12684
[2025-10-13 01:22:26] 2025-10-13 05:21:38,619 | INFO     | corecount: 8
[2025-10-13 01:22:26] 2025-10-13 05:21:38,619 | INFO     | event service: False
[2025-10-13 01:22:26] 2025-10-13 05:21:38,619 | INFO     | sizes: {0: 2348686, 1: 2348885, 5: 2349147, 11: 2349203, 3723: 2375069, 3725: 2384251, 3729: 2384389}
[2025-10-13 01:22:26] 2025-10-13 05:21:38,619 | INFO     | --------------------------------------------------
[2025-10-13 01:22:26] 2025-10-13 05:21:38,619 | INFO     | 
[2025-10-13 01:22:26] 2025-10-13 05:21:38,620 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 01:22:26] 2025-10-13 05:21:38,644 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:22:26] 2025-10-13 05:21:38,644 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:22:26] 2025-10-13 05:21:38,645 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:22:26] 2025-10-13 05:21:38,645 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:22:26] 2025-10-13 05:21:38,645 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:22:26] 2025-10-13 05:21:38,645 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:22:26] 2025-10-13 05:21:38,645 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:22:26] 2025-10-13 05:21:38,645 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:22:26] 2025-10-13 05:21:38,645 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:22:26] 2025-10-13 05:21:38,646 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:22:26] 2025-10-13 05:21:38,646 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:22:26] 2025-10-13 05:21:38,646 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:22:26] 2025-10-13 05:21:38,646 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:22:26] 2025-10-13 05:21:38,646 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:22:26] 2025-10-13 05:21:38,646 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:22:26] 2025-10-13 05:21:38,646 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:22:26] 2025-10-13 05:21:38,646 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:22:26] 2025-10-13 05:21:38,646 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:22:26] 2025-10-13 05:21:38,647 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:22:26] 2025-10-13 05:21:38,647 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:22:26] 2025-10-13 05:21:38,647 | INFO     | job 6840969196 has completed (purged errors)
[2025-10-13 01:22:26] 2025-10-13 05:21:38,647 | INFO     | overall cleanup function is called
[2025-10-13 01:22:26] 2025-10-13 05:21:39,655 | INFO     | --- collectZombieJob: --- 10, [12684]
[2025-10-13 01:22:26] 2025-10-13 05:21:39,655 | INFO     | zombie collector waiting for pid 12684
[2025-10-13 01:22:26] 2025-10-13 05:21:39,656 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:22:26] 2025-10-13 05:21:39,656 | INFO     | collected zombie processes
[2025-10-13 01:22:26] 2025-10-13 05:21:39,656 | INFO     | will attempt to kill all subprocesses of pid=12684
[2025-10-13 01:22:26] 2025-10-13 05:21:39,772 | INFO     | process IDs to be killed: [12684] (in reverse order)
[2025-10-13 01:22:26] 2025-10-13 05:21:39,830 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:22:26] 2025-10-13 05:21:39,831 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:22:26] 2025-10-13 05:21:39,835 | INFO     | did not find any defunct processes belonging to 12684
[2025-10-13 01:22:26] 2025-10-13 05:21:39,838 | INFO     | did not find any defunct processes belonging to 12684
[2025-10-13 01:22:26] 2025-10-13 05:21:39,839 | INFO     | ready for new job
[2025-10-13 01:22:26] 2025-10-13 05:21:39,839 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:22:26] 2025-10-13 05:21:39,841 | INFO     | ***************************************
[2025-10-13 01:22:26] 2025-10-13 05:21:39,841 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:22:26] 2025-10-13 05:21:39,841 | INFO     | ***************************************
[2025-10-13 01:22:26] 2025-10-13 05:21:39,841 | INFO     | 
[2025-10-13 01:22:26] 2025-10-13 05:21:39,842 | INFO     | architecture information:
[2025-10-13 01:22:26] 2025-10-13 05:21:39,843 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:22:26] 2025-10-13 05:21:39,859 | INFO     | cat /etc/os-release:
[2025-10-13 01:22:26] NAME="CentOS Linux"
[2025-10-13 01:22:26] VERSION="7 (Core)"
[2025-10-13 01:22:26] ID="centos"
[2025-10-13 01:22:26] ID_LIKE="rhel fedora"
[2025-10-13 01:22:26] VERSION_ID="7"
[2025-10-13 01:22:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:22:26] ANSI_COLOR="0;31"
[2025-10-13 01:22:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:22:26] HOME_URL="https://www.centos.org/"
[2025-10-13 01:22:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:22:26] 
[2025-10-13 01:22:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:22:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:22:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:22:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:22:26] 
[2025-10-13 01:22:26] 2025-10-13 05:21:39,860 | INFO     | ***************************************
[2025-10-13 01:22:26] 2025-10-13 05:21:40,363 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 01:22:26] 2025-10-13 05:21:40,382 | INFO     | sufficient remaining disk space (32874954752 B)
[2025-10-13 01:22:26] 2025-10-13 05:21:40,382 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:22:26] 2025-10-13 05:21:40,382 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:22:26] 2025-10-13 05:21:40,382 | INFO     | update_server=False
[2025-10-13 01:22:26] 2025-10-13 05:21:40,383 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:22:26] 2025-10-13 05:21:40,383 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:22:26] 2025-10-13 05:21:40,383 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:22:26] 2025-10-13 05:21:40,383 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:22:26] 2025-10-13 05:21:40,384 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:22:26] 2025-10-13 05:21:40,385 | INFO     | aborting loop
[2025-10-13 01:22:26] 2025-10-13 05:21:41,088 | INFO     | all data control threads have been joined
[2025-10-13 01:22:26] 2025-10-13 05:21:41,284 | INFO     | all job control threads have been joined
[2025-10-13 01:22:26] 2025-10-13 05:21:41,385 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:22:26] 2025-10-13 05:21:41,388 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:22:26] 2025-10-13 05:21:41,388 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:22:26] 2025-10-13 05:21:41,424 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:22:26] 2025-10-13 05:21:41,540 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:22:26] 2025-10-13 05:21:41,781 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:22:26] 2025-10-13 05:21:41,815 | INFO     | all payload control threads have been joined
[2025-10-13 01:22:26] 2025-10-13 05:21:42,094 | INFO     | [data] control thread has finished
[2025-10-13 01:22:26] 2025-10-13 05:21:42,254 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:22:26] 2025-10-13 05:21:42,290 | INFO     | [job] control thread has finished
[2025-10-13 01:22:26] 2025-10-13 05:21:42,330 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:22:26] 2025-10-13 05:21:42,389 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:22:26] 2025-10-13 05:21:42,703 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:22:26] 2025-10-13 05:21:42,704 | INFO     | [job] validate thread has finished
[2025-10-13 01:22:26] 2025-10-13 05:21:42,710 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:22:26] 2025-10-13 05:21:42,821 | INFO     | [payload] control thread has finished
[2025-10-13 01:22:26] 2025-10-13 05:21:44,390 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:22:26] 2025-10-13 05:22:09,945 | INFO     | PID=6320 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 01:22:26] 2025-10-13 05:22:09,945 | INFO     | .. there are 2 such processes running
[2025-10-13 01:22:26] 2025-10-13 05:22:09,945 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:22:26] 2025-10-13 05:22:09,945 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:22:26] 2025-10-13 05:22:09,945 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:22:26] 2025-10-13 05:22:19,735 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:22:26] 2025-10-13 05:22:20,936 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140527481022272)>', '<ExcThread(monitor, started 140527185925888)>']
[2025-10-13 01:22:26] 2025-10-13 05:22:21,001 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:22:26] 2025-10-13 05:22:21,002 | INFO     | [monitor] control thread has ended
[2025-10-13 01:22:26] 2025-10-13 05:22:25,962 | INFO     | all workflow threads have been joined
[2025-10-13 01:22:26] 2025-10-13 05:22:25,962 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:22:26] 2025-10-13 05:22:25,962 | INFO     | traces error code: 0
[2025-10-13 01:22:26] 2025-10-13 05:22:25,963 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:22:26] 2025-10-13 05:22:26,065 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:22:26] 2025-10-13 05:22:26,069 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:22:26] 2025-10-13 05:22:26,072 [wrapper] pilotpid: 6320
[2025-10-13 01:22:26] 2025-10-13 05:22:26,076 [wrapper] Pilot exit status: 0
[2025-10-13 01:22:26] 2025-10-13 05:22:26,088 [wrapper] pandaids: 6840969196
[2025-10-13 01:22:26] 2025-10-13 05:22:26,117 [wrapper] cleanup supervisor_pilot 29444 6321
[2025-10-13 01:22:26] 2025-10-13 05:22:26,120 [wrapper] Test setup, not cleaning
[2025-10-13 01:22:26] 2025-10-13 05:22:26,124 [wrapper] apfmon messages muted
[2025-10-13 01:22:26] 2025-10-13 05:22:26,127 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:22:26] 2025-10-13 05:22:26,130 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:22:26]  *** Error codes and diagnostics ***
[2025-10-13 01:22:26]     "exeErrorCode": 0,
[2025-10-13 01:22:26]     "exeErrorDiag": "",
[2025-10-13 01:22:26]     "pilotErrorCode": 0,
[2025-10-13 01:22:26]     "pilotErrorDiag": "",
[2025-10-13 01:22:26]  *** Listing of results directory ***
[2025-10-13 01:22:26] total 406528
[2025-10-13 01:22:26] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 19:11 pilot3.tar.gz
[2025-10-13 01:22:26] -rwx------ 1 boincer umatlas     36292 Oct 12 19:29 runpilot2-wrapper.sh
[2025-10-13 01:22:26] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 19:29 queuedata.json
[2025-10-13 01:22:26] -rw-r--r-- 1 boincer umatlas       100 Oct 13 00:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:22:26] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 00:19 run_atlas
[2025-10-13 01:22:26] -rw-r--r-- 1 boincer umatlas       105 Oct 13 00:19 job.xml
[2025-10-13 01:22:26] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 00:19 start_atlas.sh
[2025-10-13 01:22:26] drwxrwx--x 2 boincer umatlas      4096 Oct 13 00:19 shared
[2025-10-13 01:22:26] -rw-r--r-- 2 boincer umatlas    569675 Oct 13 00:19 input.tar.gz
[2025-10-13 01:22:26] -rw-r--r-- 2 boincer umatlas 222656356 Oct 13 00:19 EVNT.46676267._004657.pool.root.1
[2025-10-13 01:22:26] -rw-r--r-- 1 boincer umatlas         0 Oct 13 00:19 boinc_lockfile
[2025-10-13 01:22:26] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 00:19 pandaJob.out
[2025-10-13 01:22:26] -rw------- 1 boincer umatlas    974365 Oct 13 00:19 agis_schedconf.cvmfs.json
[2025-10-13 01:22:26] -rw------- 1 boincer umatlas   1560580 Oct 13 00:19 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:22:26] drwx------ 5 boincer umatlas      4096 Oct 13 00:19 pilot3
[2025-10-13 01:22:26] -rw-r--r-- 1 boincer umatlas      6135 Oct 13 01:19 init_data.xml
[2025-10-13 01:22:26] -rw------- 1 boincer umatlas 187984361 Oct 13 01:21 HITS.46676269._092197.pool.root.1
[2025-10-13 01:22:26] -rw-r--r-- 1 boincer umatlas       529 Oct 13 01:21 boinc_task_state.xml
[2025-10-13 01:22:26] -rw------- 1 boincer umatlas      1046 Oct 13 01:21 memory_monitor_summary.json
[2025-10-13 01:22:26] -rw------- 1 boincer umatlas    304023 Oct 13 01:21 log.46676269._092197.job.log.tgz.1
[2025-10-13 01:22:26] -rw------- 1 boincer umatlas      7841 Oct 13 01:21 heartbeat.json
[2025-10-13 01:22:26] -rw-r--r-- 1 boincer umatlas        27 Oct 13 01:22 wrapper_checkpoint.txt
[2025-10-13 01:22:26] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 01:22 boinc_mmap_file
[2025-10-13 01:22:26] -rw------- 1 boincer umatlas        95 Oct 13 01:22 pilot_heartbeat.json
[2025-10-13 01:22:26] -rw------- 1 boincer umatlas      4820 Oct 13 01:22 pilotlog.txt
[2025-10-13 01:22:26] -rw------- 1 boincer umatlas    567413 Oct 13 01:22 log.46676269._092197.job.log.1
[2025-10-13 01:22:26] -rw------- 1 boincer umatlas       357 Oct 13 01:22 output.list
[2025-10-13 01:22:26] -rw-r--r-- 1 boincer umatlas       620 Oct 13 01:22 runtime_log
[2025-10-13 01:22:26] -rw------- 1 boincer umatlas    890880 Oct 13 01:22 result.tar.gz
[2025-10-13 01:22:26] -rw-r--r-- 1 boincer umatlas      8703 Oct 13 01:22 runtime_log.err
[2025-10-13 01:22:26] -rw------- 1 boincer umatlas       658 Oct 13 01:22 Aj1LDmngKS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmk3lNDmkEgvpm.diag
[2025-10-13 01:22:26] -rw-r--r-- 1 boincer umatlas     21813 Oct 13 01:22 stderr.txt
[2025-10-13 01:22:26] HITS file was successfully produced:
[2025-10-13 01:22:26] -rw------- 1 boincer umatlas 187984361 Oct 13 01:21 shared/HITS.pool.root.1
[2025-10-13 01:22:26]  *** Contents of shared directory: ***
[2025-10-13 01:22:26] total 402472
[2025-10-13 01:22:26] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 00:19 start_atlas.sh
[2025-10-13 01:22:26] -rw-r--r-- 2 boincer umatlas    569675 Oct 13 00:19 input.tar.gz
[2025-10-13 01:22:26] -rw-r--r-- 2 boincer umatlas 222656356 Oct 13 00:19 ATLAS.root_0
[2025-10-13 01:22:26] -rw------- 1 boincer umatlas 187984361 Oct 13 01:21 HITS.pool.root.1
[2025-10-13 01:22:26] -rw------- 1 boincer umatlas    890880 Oct 13 01:22 result.tar.gz
01:22:27 (2488): run_atlas exited; CPU time 27694.648338
01:22:27 (2488): called boinc_finish(0)

</stderr_txt>
]]>

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