Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:40:22 (15324): wrapper (7.7.26015): starting
14:40:22 (15324): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 14:40:22] Arguments: --nthreads 8
[2025-10-13 14:40:22] Threads: 8
[2025-10-13 14:40:22] Checking for CVMFS
[2025-10-13 14:40:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 14:40:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 14:40:24] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 14:40:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 14:40:25] 2.11.2.0 26199 221856 138996 151661 0 60 16674831 25165824 4632 130560 0 123535934 99.884 65001380 3147 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 14:40:25] CVMFS is ok
[2025-10-13 14:40:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 14:40:25] Checking for apptainer binary...
[2025-10-13 14:40:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 14:40:25] Running /usr/bin/apptainer --version
[2025-10-13 14:40:25] apptainer version 1.3.2-1.el7
[2025-10-13 14:40:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 14:40:36] cg-vwn248.simple-grid.lan
[2025-10-13 14:40:36] apptainer works
[2025-10-13 14:40:36] Set ATHENA_PROC_NUMBER=8
[2025-10-13 14:40:36] Set ATHENA_CORE_NUMBER=8
[2025-10-13 14:40:36] Starting ATLAS job with PandaID=6840969776
[2025-10-13 14:40:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 18:59:32]  *** The last 200 lines of the pilot log: ***
[2025-10-13 18:59:32] 2025-10-13 16:58:24,462 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 18:59:32] 2025-10-13 16:58:24,462 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 18:59:32] 2025-10-13 16:58:24,468 | INFO     | fitting pss+swap vs Time
[2025-10-13 18:59:32] 2025-10-13 16:58:24,468 | INFO     | sum of square deviations: 4787066500.0
[2025-10-13 18:59:32] 2025-10-13 16:58:24,471 | INFO     | sum of deviations: -9022384889.0
[2025-10-13 18:59:32] 2025-10-13 16:58:24,471 | INFO     | mean x: 1760366989.0
[2025-10-13 18:59:32] 2025-10-13 16:58:24,471 | INFO     | mean y: 2494768.3212851407
[2025-10-13 18:59:32] 2025-10-13 16:58:24,471 | INFO     | -- intersect: 3320332220.6834006
[2025-10-13 18:59:32] 2025-10-13 16:58:24,471 | INFO     | intersect: 3320332220.6834006
[2025-10-13 18:59:32] 2025-10-13 16:58:24,472 | INFO     | chi2: 2.3767227757168965
[2025-10-13 18:59:32] 2025-10-13 16:58:24,472 | INFO     | sum of square deviations: 4504437945.0
[2025-10-13 18:59:32] 2025-10-13 16:58:24,474 | INFO     | sum of deviations: 7594183867.499991
[2025-10-13 18:59:32] 2025-10-13 16:58:24,475 | INFO     | mean x: 1760366836.5
[2025-10-13 18:59:32] 2025-10-13 16:58:24,475 | INFO     | mean y: 2503589.331967213
[2025-10-13 18:59:32] 2025-10-13 16:58:24,475 | INFO     | -- intersect: -2965358238.01757
[2025-10-13 18:59:32] 2025-10-13 16:58:24,475 | INFO     | intersect: -2965358238.01757
[2025-10-13 18:59:32] 2025-10-13 16:58:24,475 | INFO     | chi2: 1.6057121305065594
[2025-10-13 18:59:32] 2025-10-13 16:58:24,476 | INFO     | current chi2=1.6057121305065594 (change=32.44007475704757 %)
[2025-10-13 18:59:32] 2025-10-13 16:58:24,484 | INFO     | sum of square deviations: 4233158440.0
[2025-10-13 18:59:32] 2025-10-13 16:58:24,487 | INFO     | sum of deviations: 7426109744.000002
[2025-10-13 18:59:32] 2025-10-13 16:58:24,487 | INFO     | mean x: 1760366684.0
[2025-10-13 18:59:32] 2025-10-13 16:58:24,487 | INFO     | mean y: 2503494.8368200837
[2025-10-13 18:59:32] 2025-10-13 16:58:24,487 | INFO     | -- intersect: -3085657832.067205
[2025-10-13 18:59:32] 2025-10-13 16:58:24,487 | INFO     | intersect: -3085657832.067205
[2025-10-13 18:59:32] 2025-10-13 16:58:24,488 | INFO     | chi2: 1.6060722429176635
[2025-10-13 18:59:32] 2025-10-13 16:58:24,488 | INFO     | current chi2=1.6060722429176635 (change=-0.022426959618877192 %)
[2025-10-13 18:59:32] 2025-10-13 16:58:24,488 | INFO     | right removable region: 238
[2025-10-13 18:59:32] 2025-10-13 16:58:24,488 | INFO     | sum of square deviations: 4504437945.0
[2025-10-13 18:59:32] 2025-10-13 16:58:24,491 | INFO     | sum of deviations: -46018614445.50001
[2025-10-13 18:59:32] 2025-10-13 16:58:24,491 | INFO     | mean x: 1760367141.5
[2025-10-13 18:59:32] 2025-10-13 16:58:24,491 | INFO     | mean y: 2514539.651639344
[2025-10-13 18:59:32] 2025-10-13 16:58:24,491 | INFO     | -- intersect: 17986924083.385612
[2025-10-13 18:59:32] 2025-10-13 16:58:24,491 | INFO     | intersect: 17986924083.385612
[2025-10-13 18:59:32] 2025-10-13 16:58:24,492 | INFO     | chi2: 0.9498524385093519
[2025-10-13 18:59:32] 2025-10-13 16:58:24,492 | INFO     | current chi2=0.9498524385093519 (change=60.03520275002011 %)
[2025-10-13 18:59:32] 2025-10-13 16:58:24,492 | INFO     | sum of square deviations: 4233158440.0
[2025-10-13 18:59:32] 2025-10-13 16:58:24,495 | INFO     | sum of deviations: -41945762449.99999
[2025-10-13 18:59:32] 2025-10-13 16:58:24,495 | INFO     | mean x: 1760367294.0
[2025-10-13 18:59:32] 2025-10-13 16:58:24,495 | INFO     | mean y: 2512226.3138075313
[2025-10-13 18:59:32] 2025-10-13 16:58:24,495 | INFO     | -- intersect: 17445740346.750824
[2025-10-13 18:59:32] 2025-10-13 16:58:24,495 | INFO     | intersect: 17445740346.750824
[2025-10-13 18:59:32] 2025-10-13 16:58:24,496 | INFO     | chi2: 0.9388346121321911
[2025-10-13 18:59:32] 2025-10-13 16:58:24,496 | INFO     | current chi2=0.9388346121321911 (change=1.15995137038881 %)
[2025-10-13 18:59:32] 2025-10-13 16:58:24,496 | INFO     | left removable region: 20
[2025-10-13 18:59:32] 2025-10-13 16:58:24,496 | INFO     | sum of square deviations: 3212467674.5
[2025-10-13 18:59:32] 2025-10-13 16:58:24,498 | INFO     | sum of deviations: -9356396031.499998
[2025-10-13 18:59:32] 2025-10-13 16:58:24,498 | INFO     | mean x: 1760367263.5
[2025-10-13 18:59:32] 2025-10-13 16:58:24,498 | INFO     | mean y: 2511980.353211009
[2025-10-13 18:59:32] 2025-10-13 16:58:24,499 | INFO     | -- intersect: 5129627626.974456
[2025-10-13 18:59:32] 2025-10-13 16:58:24,499 | INFO     | intersect: 5129627626.974456
[2025-10-13 18:59:32] 2025-10-13 16:58:24,507 | INFO     | chi2: 0.09190647538247815
[2025-10-13 18:59:32] 2025-10-13 16:58:24,508 | INFO     | -- intersect: 5129627626.974456
[2025-10-13 18:59:32] 2025-10-13 16:58:24,508 | INFO     | current memory leak: -2.91 B/s (using 218 data points, chi2=0.09)
[2025-10-13 18:59:32] 2025-10-13 16:58:24,508 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 18:59:32] 2025-10-13 16:58:24,509 | INFO     | ..............................
[2025-10-13 18:59:32] 2025-10-13 16:58:24,509 | INFO     | . Timing measurements:
[2025-10-13 18:59:32] 2025-10-13 16:58:24,509 | INFO     | . get job = 0 s
[2025-10-13 18:59:32] 2025-10-13 16:58:24,509 | INFO     | . initial setup = 2 s
[2025-10-13 18:59:32] 2025-10-13 16:58:24,509 | INFO     | . payload setup = 9 s
[2025-10-13 18:59:32] 2025-10-13 16:58:24,509 | INFO     | . stage-in = 0 s
[2025-10-13 18:59:32] 2025-10-13 16:58:24,509 | INFO     | . payload execution = 15195 s
[2025-10-13 18:59:32] 2025-10-13 16:58:24,509 | INFO     | . stage-out = 4 s
[2025-10-13 18:59:32] 2025-10-13 16:58:24,509 | INFO     | . log creation = 1 s
[2025-10-13 18:59:32] 2025-10-13 16:58:24,510 | INFO     | ..............................
[2025-10-13 18:59:32] 2025-10-13 16:58:24,847 | INFO     | 
[2025-10-13 18:59:32] 2025-10-13 16:58:24,847 | INFO     | job summary report
[2025-10-13 18:59:32] 2025-10-13 16:58:24,847 | INFO     | --------------------------------------------------
[2025-10-13 18:59:32] 2025-10-13 16:58:24,848 | INFO     | PanDA job id: 6840969776
[2025-10-13 18:59:32] 2025-10-13 16:58:24,848 | INFO     | task id: 46676269
[2025-10-13 18:59:32] 2025-10-13 16:58:24,848 | INFO     | errors: (none)
[2025-10-13 18:59:32] 2025-10-13 16:58:24,848 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 18:59:32] 2025-10-13 16:58:24,848 | INFO     | pilot state: finished 
[2025-10-13 18:59:32] 2025-10-13 16:58:24,848 | INFO     | transexitcode: 0
[2025-10-13 18:59:32] 2025-10-13 16:58:24,848 | INFO     | exeerrorcode: 0
[2025-10-13 18:59:32] 2025-10-13 16:58:24,848 | INFO     | exeerrordiag: 
[2025-10-13 18:59:32] 2025-10-13 16:58:24,848 | INFO     | exitcode: 0
[2025-10-13 18:59:32] 2025-10-13 16:58:24,848 | INFO     | exitmsg: OK
[2025-10-13 18:59:32] 2025-10-13 16:58:24,849 | INFO     | cpuconsumptiontime: 57910 s
[2025-10-13 18:59:32] 2025-10-13 16:58:24,849 | INFO     | nevents: 400
[2025-10-13 18:59:32] 2025-10-13 16:58:24,849 | INFO     | neventsw: 0
[2025-10-13 18:59:32] 2025-10-13 16:58:24,849 | INFO     | pid: 25680
[2025-10-13 18:59:32] 2025-10-13 16:58:24,849 | INFO     | pgrp: 25680
[2025-10-13 18:59:32] 2025-10-13 16:58:24,849 | INFO     | corecount: 8
[2025-10-13 18:59:32] 2025-10-13 16:58:24,849 | INFO     | event service: False
[2025-10-13 18:59:32] 2025-10-13 16:58:24,849 | INFO     | sizes: {0: 2348858, 10: 2349120, 11: 2349148, 15209: 2379561, 15214: 2388617, 15311: 2388755}
[2025-10-13 18:59:32] 2025-10-13 16:58:24,849 | INFO     | --------------------------------------------------
[2025-10-13 18:59:32] 2025-10-13 16:58:24,849 | INFO     | 
[2025-10-13 18:59:32] 2025-10-13 16:58:24,850 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-10-13 18:59:32] 2025-10-13 16:58:25,140 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 18:59:32] 2025-10-13 16:58:25,140 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 18:59:32] 2025-10-13 16:58:25,140 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 18:59:32] 2025-10-13 16:58:25,140 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 18:59:32] 2025-10-13 16:58:25,140 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 18:59:32] 2025-10-13 16:58:25,140 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 18:59:32] 2025-10-13 16:58:25,140 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 18:59:32] 2025-10-13 16:58:25,141 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 18:59:32] 2025-10-13 16:58:25,141 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 18:59:32] 2025-10-13 16:58:25,141 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 18:59:32] 2025-10-13 16:58:25,141 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 18:59:32] 2025-10-13 16:58:25,141 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 18:59:32] 2025-10-13 16:58:25,141 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 18:59:32] 2025-10-13 16:58:25,141 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 18:59:32] 2025-10-13 16:58:25,141 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 18:59:32] 2025-10-13 16:58:25,141 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 18:59:32] 2025-10-13 16:58:25,141 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 18:59:32] 2025-10-13 16:58:25,142 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 18:59:32] 2025-10-13 16:58:25,142 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 18:59:32] 2025-10-13 16:58:25,142 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 18:59:32] 2025-10-13 16:58:25,142 | INFO     | job 6840969776 has completed (purged errors)
[2025-10-13 18:59:32] 2025-10-13 16:58:25,142 | INFO     | overall cleanup function is called
[2025-10-13 18:59:32] 2025-10-13 16:58:26,151 | INFO     | --- collectZombieJob: --- 10, [25680]
[2025-10-13 18:59:32] 2025-10-13 16:58:26,151 | INFO     | zombie collector waiting for pid 25680
[2025-10-13 18:59:32] 2025-10-13 16:58:26,152 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 18:59:32] 2025-10-13 16:58:26,152 | INFO     | collected zombie processes
[2025-10-13 18:59:32] 2025-10-13 16:58:26,152 | INFO     | will attempt to kill all subprocesses of pid=25680
[2025-10-13 18:59:32] 2025-10-13 16:58:26,262 | INFO     | process IDs to be killed: [25680] (in reverse order)
[2025-10-13 18:59:32] 2025-10-13 16:58:26,988 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 18:59:32] 2025-10-13 16:58:26,988 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 18:59:32] 2025-10-13 16:58:26,992 | INFO     | did not find any defunct processes belonging to 25680
[2025-10-13 18:59:32] 2025-10-13 16:58:26,995 | INFO     | did not find any defunct processes belonging to 25680
[2025-10-13 18:59:32] 2025-10-13 16:58:26,995 | INFO     | ready for new job
[2025-10-13 18:59:32] 2025-10-13 16:58:26,995 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 18:59:32] 2025-10-13 16:58:26,998 | INFO     | ***************************************
[2025-10-13 18:59:32] 2025-10-13 16:58:26,998 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 18:59:32] 2025-10-13 16:58:26,998 | INFO     | ***************************************
[2025-10-13 18:59:32] 2025-10-13 16:58:26,998 | INFO     | 
[2025-10-13 18:59:32] 2025-10-13 16:58:26,999 | INFO     | pilot is running in a VM
[2025-10-13 18:59:32] 2025-10-13 16:58:26,999 | INFO     | architecture information:
[2025-10-13 18:59:32] 2025-10-13 16:58:26,999 | INFO     | executing command: cat /etc/os-release
[2025-10-13 18:59:32] 2025-10-13 16:58:27,146 | INFO     | cat /etc/os-release:
[2025-10-13 18:59:32] NAME="CentOS Linux"
[2025-10-13 18:59:32] VERSION="7 (Core)"
[2025-10-13 18:59:32] ID="centos"
[2025-10-13 18:59:32] ID_LIKE="rhel fedora"
[2025-10-13 18:59:32] VERSION_ID="7"
[2025-10-13 18:59:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 18:59:32] ANSI_COLOR="0;31"
[2025-10-13 18:59:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 18:59:32] HOME_URL="https://www.centos.org/"
[2025-10-13 18:59:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 18:59:32] 
[2025-10-13 18:59:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 18:59:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 18:59:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 18:59:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 18:59:32] 
[2025-10-13 18:59:32] 2025-10-13 16:58:27,146 | INFO     | ***************************************
[2025-10-13 18:59:32] 2025-10-13 16:58:27,649 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-10-13 18:59:32] 2025-10-13 16:58:27,914 | INFO     | sufficient remaining disk space (496569942016 B)
[2025-10-13 18:59:32] 2025-10-13 16:58:27,914 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 18:59:32] 2025-10-13 16:58:27,914 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 18:59:32] 2025-10-13 16:58:27,914 | INFO     | update_server=False
[2025-10-13 18:59:32] 2025-10-13 16:58:27,915 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 18:59:32] 2025-10-13 16:58:28,081 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:59:32] 2025-10-13 16:58:28,082 | INFO     | aborting loop
[2025-10-13 18:59:32] 2025-10-13 16:58:28,096 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 18:59:32] 2025-10-13 16:58:28,183 | INFO     | all data control threads have been joined
[2025-10-13 18:59:32] 2025-10-13 16:58:28,198 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 18:59:32] 2025-10-13 16:58:28,229 | INFO     | all job control threads have been joined
[2025-10-13 18:59:32] 2025-10-13 16:58:28,919 | INFO     | [job] retrieve thread has finished
[2025-10-13 18:59:32] 2025-10-13 16:58:29,004 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 18:59:32] 2025-10-13 16:58:29,087 | INFO     | [job] job monitor thread has finished
[2025-10-13 18:59:32] 2025-10-13 16:58:29,189 | INFO     | [data] control thread has finished
[2025-10-13 18:59:32] 2025-10-13 16:58:29,235 | INFO     | all payload control threads have been joined
[2025-10-13 18:59:32] 2025-10-13 16:58:29,239 | INFO     | [job] control thread has finished
[2025-10-13 18:59:32] 2025-10-13 16:58:29,597 | INFO     | [payload] validate_post thread has finished
[2025-10-13 18:59:32] 2025-10-13 16:58:29,636 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 18:59:32] 2025-10-13 16:58:29,681 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 18:59:32] 2025-10-13 16:58:29,855 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 18:59:32] 2025-10-13 16:58:30,103 | INFO     | [data] copytool_out thread has finished
[2025-10-13 18:59:32] 2025-10-13 16:58:30,120 | INFO     | [data] copytool_in thread has finished
[2025-10-13 18:59:32] 2025-10-13 16:58:30,149 | INFO     | [payload] failed_post thread has finished
[2025-10-13 18:59:32] 2025-10-13 16:58:30,241 | INFO     | [payload] control thread has finished
[2025-10-13 18:59:32] 2025-10-13 16:58:30,335 | INFO     | [job] validate thread has finished
[2025-10-13 18:59:32] 2025-10-13 16:58:30,336 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 18:59:32] 2025-10-13 16:58:30,687 | INFO     | [job] queue monitor thread has finished
[2025-10-13 18:59:32] 2025-10-13 16:58:32,207 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 18:59:32] 2025-10-13 16:58:56,375 | INFO     | PID=19160 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 18:59:32] 2025-10-13 16:58:56,375 | INFO     | .. there are 9 such processes running
[2025-10-13 18:59:32] 2025-10-13 16:58:56,375 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 18:59:32] 2025-10-13 16:58:56,375 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 18:59:32] 2025-10-13 16:58:56,375 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 18:59:32] 2025-10-13 16:59:21,277 | INFO     | [monitor] cgroup control has ended
[2025-10-13 18:59:32] 2025-10-13 16:59:21,842 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140579354601280)>', '<ExcThread(monitor, started 140578759104256)>']
[2025-10-13 18:59:32] 2025-10-13 16:59:22,537 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 18:59:32] 2025-10-13 16:59:22,537 | INFO     | [monitor] control thread has ended
[2025-10-13 18:59:32] 2025-10-13 16:59:26,868 | INFO     | all workflow threads have been joined
[2025-10-13 18:59:32] 2025-10-13 16:59:26,868 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 18:59:32] 2025-10-13 16:59:26,869 | INFO     | traces error code: 0
[2025-10-13 18:59:32] 2025-10-13 16:59:26,869 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 18:59:32] 2025-10-13 16:59:27,350 [wrapper] ==== pilot stdout END ====
[2025-10-13 18:59:32] 2025-10-13 16:59:27,451 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 18:59:32] 2025-10-13 16:59:27,546 [wrapper] pilotpid: 19160
[2025-10-13 18:59:32] 2025-10-13 16:59:27,655 [wrapper] Pilot exit status: 0
[2025-10-13 18:59:32] 2025-10-13 16:59:28,066 [wrapper] pandaids: 6840969776
[2025-10-13 18:59:32] 2025-10-13 16:59:29,047 [wrapper] cleanup supervisor_pilot 20634 19161
[2025-10-13 18:59:32] 2025-10-13 16:59:29,133 [wrapper] Test setup, not cleaning
[2025-10-13 18:59:32] 2025-10-13 16:59:29,204 [wrapper] apfmon messages muted
[2025-10-13 18:59:32] 2025-10-13 16:59:29,313 [wrapper] ==== wrapper stdout END ====
[2025-10-13 18:59:32] 2025-10-13 16:59:29,415 [wrapper] ==== wrapper stderr END ====
[2025-10-13 18:59:32]  *** Error codes and diagnostics ***
[2025-10-13 18:59:32]     "exeErrorCode": 0,
[2025-10-13 18:59:32]     "exeErrorDiag": "",
[2025-10-13 18:59:32]     "pilotErrorCode": 0,
[2025-10-13 18:59:32]     "pilotErrorDiag": "",
[2025-10-13 18:59:32]  *** Listing of results directory ***
[2025-10-13 18:59:32] total 414968
[2025-10-13 18:59:32] -rw-r--r--. 1 boinc boinc    557409 Oct 13 01:11 pilot3.tar.gz
[2025-10-13 18:59:32] -rw-r--r--. 1 boinc boinc      5112 Oct 13 01:45 queuedata.json
[2025-10-13 18:59:32] -rwx------. 1 boinc boinc     36292 Oct 13 01:45 runpilot2-wrapper.sh
[2025-10-13 18:59:32] -rw-r--r--. 1 boinc boinc       100 Oct 13 14:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 18:59:32] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 14:40 run_atlas
[2025-10-13 18:59:32] -rw-r--r--. 1 boinc boinc       105 Oct 13 14:40 job.xml
[2025-10-13 18:59:32] -rw-r--r--. 1 boinc boinc      6391 Oct 13 14:40 init_data.xml
[2025-10-13 18:59:32] -rw-r--r--. 2 boinc boinc 217743070 Oct 13 14:40 EVNT.46676267._004667.pool.root.1
[2025-10-13 18:59:32] -rw-r--r--. 2 boinc boinc     15120 Oct 13 14:40 start_atlas.sh
[2025-10-13 18:59:32] drwxrwx--x. 2 boinc boinc        68 Oct 13 14:40 shared
[2025-10-13 18:59:32] -rw-r--r--. 2 boinc boinc    569680 Oct 13 14:40 input.tar.gz
[2025-10-13 18:59:32] -rw-r--r--. 1 boinc boinc         0 Oct 13 14:40 boinc_lockfile
[2025-10-13 18:59:32] -rw-r--r--. 1 boinc boinc      2550 Oct 13 14:40 pandaJob.out
[2025-10-13 18:59:32] -rw-------. 1 boinc boinc    972497 Oct 13 14:42 agis_schedconf.cvmfs.json
[2025-10-13 18:59:32] drwx------. 5 boinc boinc      4096 Oct 13 14:42 pilot3
[2025-10-13 18:59:32] -rw-------. 1 boinc boinc 198214680 Oct 13 18:55 HITS.46676269._092460.pool.root.1
[2025-10-13 18:59:32] -rw-r--r--. 1 boinc boinc       530 Oct 13 18:55 boinc_task_state.xml
[2025-10-13 18:59:32] -rw-------. 1 boinc boinc      1017 Oct 13 18:56 memory_monitor_summary.json
[2025-10-13 18:59:32] -rw-------. 1 boinc boinc   1560580 Oct 13 18:56 agis_ddmendpoints.agis.ALL.json
[2025-10-13 18:59:32] -rw-------. 1 boinc boinc    476024 Oct 13 18:56 log.46676269._092460.job.log.tgz.1
[2025-10-13 18:59:32] -rw-------. 1 boinc boinc        95 Oct 13 18:58 pilot_heartbeat.json
[2025-10-13 18:59:32] -rw-------. 1 boinc boinc      7781 Oct 13 18:58 heartbeat.json
[2025-10-13 18:59:32] -rw-r--r--. 1 boinc boinc        28 Oct 13 18:59 wrapper_checkpoint.txt
[2025-10-13 18:59:32] -rw-r--r--. 1 boinc boinc      8192 Oct 13 18:59 boinc_mmap_file
[2025-10-13 18:59:32] -rw-------. 1 boinc boinc      4885 Oct 13 18:59 pilotlog.txt
[2025-10-13 18:59:32] -rw-------. 1 boinc boinc   2064686 Oct 13 18:59 log.46676269._092460.job.log.1
[2025-10-13 18:59:32] -rw-------. 1 boinc boinc       357 Oct 13 18:59 output.list
[2025-10-13 18:59:32] -rw-r--r--. 1 boinc boinc       620 Oct 13 18:59 runtime_log
[2025-10-13 18:59:32] -rw-------. 1 boinc boinc   2560000 Oct 13 18:59 result.tar.gz
[2025-10-13 18:59:32] -rw-------. 1 boinc boinc       656 Oct 13 18:59 ssQKDm6vKS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmP5lNDm0Itqan.diag
[2025-10-13 18:59:32] -rw-r--r--. 1 boinc boinc      8717 Oct 13 18:59 runtime_log.err
[2025-10-13 18:59:32] -rw-r--r--. 1 boinc boinc     20487 Oct 13 18:59 stderr.txt
[2025-10-13 18:59:32] HITS file was successfully produced:
[2025-10-13 18:59:32] -rw-------. 1 boinc boinc 198214680 Oct 13 18:55 shared/HITS.pool.root.1
[2025-10-13 18:59:32]  *** Contents of shared directory: ***
[2025-10-13 18:59:32] total 409288
[2025-10-13 18:59:32] -rw-r--r--. 2 boinc boinc 217743070 Oct 13 14:40 ATLAS.root_0
[2025-10-13 18:59:32] -rw-r--r--. 2 boinc boinc     15120 Oct 13 14:40 start_atlas.sh
[2025-10-13 18:59:32] -rw-r--r--. 2 boinc boinc    569680 Oct 13 14:40 input.tar.gz
[2025-10-13 18:59:32] -rw-------. 1 boinc boinc 198214680 Oct 13 18:55 HITS.pool.root.1
[2025-10-13 18:59:32] -rw-------. 1 boinc boinc   2560000 Oct 13 18:59 result.tar.gz
18:59:33 (15324): run_atlas exited; CPU time 58104.582898
18:59:33 (15324): called boinc_finish(0)

</stderr_txt>
]]>

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