Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:27:21 (1003954): wrapper (7.7.26015): starting
14:27:21 (1003954): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 14:27:21] Arguments: --nthreads 9
[2025-10-13 14:27:21] Threads: 9
[2025-10-13 14:27:21] Checking for CVMFS
[2025-10-13 14:27:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 14:27:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 14:27:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 14:27:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 14:27:22] 2.13.2.0 2209255 131061 286276 151670 1 341 26943827 32935936 16677 16776704 0 108218342 99.677 96852069 30181 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 14:27:22] CVMFS is ok
[2025-10-13 14:27:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 14:27:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 14:27:22] Further information can be found at the LHC@home message board.
[2025-10-13 14:27:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 14:27:22] Checking for apptainer binary...
[2025-10-13 14:27:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 14:27:22] Running /usr/bin/apptainer --version
[2025-10-13 14:27:22] apptainer version 1.4.3-1.el9
[2025-10-13 14:27:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 14:27:23] c-5-6.aglt2.org
[2025-10-13 14:27:23] apptainer works
[2025-10-13 14:27:23] Set ATHENA_PROC_NUMBER=9
[2025-10-13 14:27:23] Set ATHENA_CORE_NUMBER=9
[2025-10-13 14:27:23] Starting ATLAS job with PandaID=6840969504
[2025-10-13 14:27:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 20:16:58]  *** The last 200 lines of the pilot log: ***
[2025-10-13 20:16:58] 2025-10-14 00:16:23,968 | INFO     | mean x: 1760390873.4939394
[2025-10-13 20:16:58] 2025-10-14 00:16:23,968 | INFO     | mean y: 2355890.309090909
[2025-10-13 20:16:58] 2025-10-14 00:16:23,968 | INFO     | -- intersect: -22049946527.982143
[2025-10-13 20:16:58] 2025-10-14 00:16:23,968 | INFO     | intersect: -22049946527.982143
[2025-10-13 20:16:58] 2025-10-14 00:16:23,969 | INFO     | chi2: 0.9597213781173816
[2025-10-13 20:16:58] 2025-10-14 00:16:23,969 | INFO     | current chi2=0.9597213781173816 (change=49.87175424331428 %)
[2025-10-13 20:16:58] 2025-10-14 00:16:23,969 | INFO     | sum of square deviations: 10645413159.987698
[2025-10-13 20:16:58] 2025-10-14 00:16:23,972 | INFO     | sum of deviations: 106915557822.17842
[2025-10-13 20:16:58] 2025-10-14 00:16:23,972 | INFO     | mean x: 1760391026.0061538
[2025-10-13 20:16:58] 2025-10-14 00:16:23,972 | INFO     | mean y: 2365871.9107692307
[2025-10-13 20:16:58] 2025-10-14 00:16:23,973 | INFO     | -- intersect: -17677848667.62735
[2025-10-13 20:16:58] 2025-10-14 00:16:23,973 | INFO     | intersect: -17677848667.62735
[2025-10-13 20:16:58] 2025-10-14 00:16:23,973 | INFO     | chi2: 0.6486251614025489
[2025-10-13 20:16:58] 2025-10-14 00:16:23,973 | INFO     | current chi2=0.6486251614025489 (change=32.41526382637098 %)
[2025-10-13 20:16:58] 2025-10-14 00:16:23,974 | INFO     | sum of square deviations: 10161606173.950031
[2025-10-13 20:16:58] 2025-10-14 00:16:23,976 | INFO     | sum of deviations: 78943056283.06248
[2025-10-13 20:16:58] 2025-10-14 00:16:23,977 | INFO     | mean x: 1760391178.5125
[2025-10-13 20:16:58] 2025-10-14 00:16:23,977 | INFO     | mean y: 2374686.359375
[2025-10-13 20:16:58] 2025-10-14 00:16:23,977 | INFO     | -- intersect: -13673677849.68357
[2025-10-13 20:16:58] 2025-10-14 00:16:23,977 | INFO     | intersect: -13673677849.68357
[2025-10-13 20:16:58] 2025-10-14 00:16:23,978 | INFO     | chi2: 0.4193342923495919
[2025-10-13 20:16:58] 2025-10-14 00:16:23,978 | INFO     | current chi2=0.4193342923495919 (change=35.35028899544259 %)
[2025-10-13 20:16:58] 2025-10-14 00:16:23,978 | INFO     | sum of square deviations: 9692663302.844435
[2025-10-13 20:16:58] 2025-10-14 00:16:23,981 | INFO     | sum of deviations: 56117079251.55554
[2025-10-13 20:16:58] 2025-10-14 00:16:23,981 | INFO     | mean x: 1760391331.0222223
[2025-10-13 20:16:58] 2025-10-14 00:16:23,982 | INFO     | mean y: 2382105.0634920634
[2025-10-13 20:16:58] 2025-10-14 00:16:23,982 | INFO     | -- intersect: -10189658694.263025
[2025-10-13 20:16:58] 2025-10-14 00:16:23,982 | INFO     | intersect: -10189658694.263025
[2025-10-13 20:16:58] 2025-10-14 00:16:23,982 | INFO     | chi2: 0.2611935529576403
[2025-10-13 20:16:58] 2025-10-14 00:16:23,982 | INFO     | current chi2=0.2611935529576403 (change=37.71233173081689 %)
[2025-10-13 20:16:58] 2025-10-14 00:16:23,983 | INFO     | sum of square deviations: 9238371257.177383
[2025-10-13 20:16:58] 2025-10-14 00:16:23,986 | INFO     | sum of deviations: 45705372389.43548
[2025-10-13 20:16:58] 2025-10-14 00:16:23,986 | INFO     | mean x: 1760391483.532258
[2025-10-13 20:16:58] 2025-10-14 00:16:23,986 | INFO     | mean y: 2385585.706451613
[2025-10-13 20:16:58] 2025-10-14 00:16:23,986 | INFO     | -- intersect: -8706871280.70525
[2025-10-13 20:16:58] 2025-10-14 00:16:23,986 | INFO     | intersect: -8706871280.70525
[2025-10-13 20:16:58] 2025-10-14 00:16:23,987 | INFO     | chi2: 0.2242879368379677
[2025-10-13 20:16:58] 2025-10-14 00:16:23,987 | INFO     | current chi2=0.2242879368379677 (change=14.129604541065325 %)
[2025-10-13 20:16:58] 2025-10-14 00:16:23,987 | INFO     | left removable region: 60
[2025-10-13 20:16:58] 2025-10-14 00:16:23,987 | INFO     | sum of square deviations: 6379248037.839406
[2025-10-13 20:16:58] 2025-10-14 00:16:23,990 | INFO     | sum of deviations: 16536793021.481756
[2025-10-13 20:16:58] 2025-10-14 00:16:23,990 | INFO     | mean x: 1760392215.59854
[2025-10-13 20:16:58] 2025-10-14 00:16:23,990 | INFO     | mean y: 2403293.704379562
[2025-10-13 20:16:58] 2025-10-14 00:16:23,990 | INFO     | -- intersect: -4561025112.481321
[2025-10-13 20:16:58] 2025-10-14 00:16:23,990 | INFO     | intersect: -4561025112.481321
[2025-10-13 20:16:58] 2025-10-14 00:16:23,991 | INFO     | chi2: 0.06366350328516693
[2025-10-13 20:16:58] 2025-10-14 00:16:23,991 | INFO     | -- intersect: -4561025112.481321
[2025-10-13 20:16:58] 2025-10-14 00:16:23,991 | INFO     | current memory leak: 2.59 B/s (using 274 data points, chi2=0.06)
[2025-10-13 20:16:58] 2025-10-14 00:16:23,992 | INFO     | could have reported an average CPU frequency of 2601 MHz (15 samples)
[2025-10-13 20:16:58] 2025-10-14 00:16:23,992 | INFO     | ..............................
[2025-10-13 20:16:58] 2025-10-14 00:16:23,992 | INFO     | . Timing measurements:
[2025-10-13 20:16:58] 2025-10-14 00:16:23,992 | INFO     | . get job = 0 s
[2025-10-13 20:16:58] 2025-10-14 00:16:23,992 | INFO     | . initial setup = 5 s
[2025-10-13 20:16:58] 2025-10-14 00:16:23,992 | INFO     | . payload setup = 47 s
[2025-10-13 20:16:58] 2025-10-14 00:16:23,992 | INFO     | . stage-in = 0 s
[2025-10-13 20:16:58] 2025-10-14 00:16:23,992 | INFO     | . payload execution = 20763 s
[2025-10-13 20:16:58] 2025-10-14 00:16:23,993 | INFO     | . stage-out = 2 s
[2025-10-13 20:16:58] 2025-10-14 00:16:23,993 | INFO     | . log creation = 0 s
[2025-10-13 20:16:58] 2025-10-14 00:16:23,993 | INFO     | ..............................
[2025-10-13 20:16:58] 2025-10-14 00:16:24,146 | INFO     | 
[2025-10-13 20:16:58] 2025-10-14 00:16:24,150 | INFO     | job summary report
[2025-10-13 20:16:58] 2025-10-14 00:16:24,150 | INFO     | --------------------------------------------------
[2025-10-13 20:16:58] 2025-10-14 00:16:24,150 | INFO     | PanDA job id: 6840969504
[2025-10-13 20:16:58] 2025-10-14 00:16:24,150 | INFO     | task id: 46676269
[2025-10-13 20:16:58] 2025-10-14 00:16:24,150 | INFO     | errors: (none)
[2025-10-13 20:16:58] 2025-10-14 00:16:24,150 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 20:16:58] 2025-10-14 00:16:24,150 | INFO     | pilot state: finished 
[2025-10-13 20:16:58] 2025-10-14 00:16:24,151 | INFO     | transexitcode: 0
[2025-10-13 20:16:58] 2025-10-14 00:16:24,151 | INFO     | exeerrorcode: 0
[2025-10-13 20:16:58] 2025-10-14 00:16:24,151 | INFO     | exeerrordiag: 
[2025-10-13 20:16:58] 2025-10-14 00:16:24,151 | INFO     | exitcode: 0
[2025-10-13 20:16:58] 2025-10-14 00:16:24,151 | INFO     | exitmsg: OK
[2025-10-13 20:16:58] 2025-10-14 00:16:24,151 | INFO     | cpuconsumptiontime: 49983 s
[2025-10-13 20:16:58] 2025-10-14 00:16:24,151 | INFO     | nevents: 400
[2025-10-13 20:16:58] 2025-10-14 00:16:24,151 | INFO     | neventsw: 0
[2025-10-13 20:16:58] 2025-10-14 00:16:24,151 | INFO     | pid: 1017023
[2025-10-13 20:16:58] 2025-10-14 00:16:24,151 | INFO     | pgrp: 1017023
[2025-10-13 20:16:58] 2025-10-14 00:16:24,151 | INFO     | corecount: 9
[2025-10-13 20:16:58] 2025-10-14 00:16:24,152 | INFO     | event service: False
[2025-10-13 20:16:58] 2025-10-14 00:16:24,152 | INFO     | sizes: {0: 2348630, 1: 2348714, 2: 2348913, 13: 2348913, 24: 2348969, 33: 2349259, 35: 2349443, 20815: 2383000, 20819: 2392026, 20821: 2392082, 20835: 2392276}
[2025-10-13 20:16:58] 2025-10-14 00:16:24,152 | INFO     | --------------------------------------------------
[2025-10-13 20:16:58] 2025-10-14 00:16:24,152 | INFO     | 
[2025-10-13 20:16:58] 2025-10-14 00:16:24,152 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 20:16:58] 2025-10-14 00:16:24,189 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 20:16:58] 2025-10-14 00:16:24,189 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 20:16:58] 2025-10-14 00:16:24,189 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 20:16:58] 2025-10-14 00:16:24,189 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 20:16:58] 2025-10-14 00:16:24,190 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 20:16:58] 2025-10-14 00:16:24,190 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 20:16:58] 2025-10-14 00:16:24,190 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 20:16:58] 2025-10-14 00:16:24,190 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 20:16:58] 2025-10-14 00:16:24,190 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 20:16:58] 2025-10-14 00:16:24,190 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 20:16:58] 2025-10-14 00:16:24,190 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 20:16:58] 2025-10-14 00:16:24,190 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 20:16:58] 2025-10-14 00:16:24,190 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 20:16:58] 2025-10-14 00:16:24,190 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 20:16:58] 2025-10-14 00:16:24,191 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 20:16:58] 2025-10-14 00:16:24,191 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 20:16:58] 2025-10-14 00:16:24,191 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 20:16:58] 2025-10-14 00:16:24,191 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 20:16:58] 2025-10-14 00:16:24,191 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 20:16:58] 2025-10-14 00:16:24,191 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 20:16:58] 2025-10-14 00:16:24,191 | INFO     | job 6840969504 has completed (purged errors)
[2025-10-13 20:16:58] 2025-10-14 00:16:24,191 | INFO     | overall cleanup function is called
[2025-10-13 20:16:58] 2025-10-14 00:16:24,559 | INFO     | PID=1007952 has CPU usage=11.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 20:16:58] 2025-10-14 00:16:24,559 | INFO     | .. there are 24 such processes running
[2025-10-13 20:16:58] 2025-10-14 00:16:25,201 | INFO     | --- collectZombieJob: --- 10, [1017023]
[2025-10-13 20:16:58] 2025-10-14 00:16:25,201 | INFO     | zombie collector waiting for pid 1017023
[2025-10-13 20:16:58] 2025-10-14 00:16:25,201 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 20:16:58] 2025-10-14 00:16:25,201 | INFO     | collected zombie processes
[2025-10-13 20:16:58] 2025-10-14 00:16:25,202 | INFO     | will attempt to kill all subprocesses of pid=1017023
[2025-10-13 20:16:58] 2025-10-14 00:16:25,545 | INFO     | process IDs to be killed: [1017023] (in reverse order)
[2025-10-13 20:16:58] 2025-10-14 00:16:25,654 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 20:16:58] 2025-10-14 00:16:25,654 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 20:16:58] 2025-10-14 00:16:25,666 | INFO     | did not find any defunct processes belonging to 1017023
[2025-10-13 20:16:58] 2025-10-14 00:16:25,678 | INFO     | did not find any defunct processes belonging to 1017023
[2025-10-13 20:16:58] 2025-10-14 00:16:25,678 | INFO     | ready for new job
[2025-10-13 20:16:58] 2025-10-14 00:16:25,679 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 20:16:58] 2025-10-14 00:16:25,681 | INFO     | ***************************************
[2025-10-13 20:16:58] 2025-10-14 00:16:25,681 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 20:16:58] 2025-10-14 00:16:25,681 | INFO     | ***************************************
[2025-10-13 20:16:58] 2025-10-14 00:16:25,681 | INFO     | 
[2025-10-13 20:16:58] 2025-10-14 00:16:25,696 | INFO     | architecture information:
[2025-10-13 20:16:58] 2025-10-14 00:16:25,696 | INFO     | executing command: cat /etc/os-release
[2025-10-13 20:16:58] 2025-10-14 00:16:25,712 | INFO     | cat /etc/os-release:
[2025-10-13 20:16:58] NAME="CentOS Linux"
[2025-10-13 20:16:58] VERSION="7 (Core)"
[2025-10-13 20:16:58] ID="centos"
[2025-10-13 20:16:58] ID_LIKE="rhel fedora"
[2025-10-13 20:16:58] VERSION_ID="7"
[2025-10-13 20:16:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 20:16:58] ANSI_COLOR="0;31"
[2025-10-13 20:16:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 20:16:58] HOME_URL="https://www.centos.org/"
[2025-10-13 20:16:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 20:16:58] 
[2025-10-13 20:16:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 20:16:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 20:16:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 20:16:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 20:16:58] 
[2025-10-13 20:16:58] 2025-10-14 00:16:25,713 | INFO     | ***************************************
[2025-10-13 20:16:58] 2025-10-14 00:16:26,215 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 20:16:58] 2025-10-14 00:16:26,234 | INFO     | sufficient remaining disk space (76534513664 B)
[2025-10-13 20:16:58] 2025-10-14 00:16:26,235 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 20:16:58] 2025-10-14 00:16:26,235 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 20:16:58] 2025-10-14 00:16:26,235 | INFO     | update_server=False
[2025-10-13 20:16:58] 2025-10-14 00:16:26,235 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 20:16:58] 2025-10-14 00:16:26,235 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 20:16:58] 2025-10-14 00:16:26,269 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 20:16:58] 2025-10-14 00:16:26,386 | INFO     | all data control threads have been joined
[2025-10-13 20:16:58] 2025-10-14 00:16:26,438 | INFO     | all payload control threads have been joined
[2025-10-13 20:16:58] 2025-10-14 00:16:26,455 | INFO     | all job control threads have been joined
[2025-10-13 20:16:58] 2025-10-14 00:16:26,469 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 20:16:58] 2025-10-14 00:16:26,469 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 20:16:58] 2025-10-14 00:16:26,469 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 20:16:58] 2025-10-14 00:16:26,469 | INFO     | will abort loop
[2025-10-13 20:16:58] 2025-10-14 00:16:27,241 | INFO     | [job] retrieve thread has finished
[2025-10-13 20:16:58] 2025-10-14 00:16:27,392 | INFO     | [data] control thread has finished
[2025-10-13 20:16:58] 2025-10-14 00:16:27,443 | INFO     | [payload] control thread has finished
[2025-10-13 20:16:58] 2025-10-14 00:16:27,460 | INFO     | [job] control thread has finished
[2025-10-13 20:16:58] 2025-10-14 00:16:27,474 | INFO     | [job] job monitor thread has finished
[2025-10-13 20:16:58] 2025-10-14 00:16:27,649 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 20:16:58] 2025-10-14 00:16:27,650 | INFO     | [data] copytool_in thread has finished
[2025-10-13 20:16:58] 2025-10-14 00:16:27,692 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 20:16:58] 2025-10-14 00:16:27,782 | INFO     | [payload] validate_post thread has finished
[2025-10-13 20:16:58] 2025-10-14 00:16:28,007 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 20:16:58] 2025-10-14 00:16:28,276 | INFO     | [data] copytool_out thread has finished
[2025-10-13 20:16:58] 2025-10-14 00:16:28,656 | INFO     | [job] validate thread has finished
[2025-10-13 20:16:58] 2025-10-14 00:16:28,795 | INFO     | [payload] failed_post thread has finished
[2025-10-13 20:16:58] 2025-10-14 00:16:29,167 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 20:16:58] 2025-10-14 00:16:30,173 | INFO     | [job] queue monitor thread has finished
[2025-10-13 20:16:58] 2025-10-14 00:16:30,243 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 20:16:58] 2025-10-14 00:16:35,063 | INFO     | [monitor] cgroup control has ended
[2025-10-13 20:16:58] 2025-10-14 00:16:36,875 | INFO     | job.realtimelogging is not enabled
[2025-10-13 20:16:58] 2025-10-14 00:16:37,881 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 20:16:58] 2025-10-14 00:16:38,363 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140218255673152)>', '<ExcThread(monitor, started 140217436587776)>']
[2025-10-13 20:16:58] 2025-10-14 00:16:43,388 | INFO     | all workflow threads have been joined
[2025-10-13 20:16:58] 2025-10-14 00:16:43,390 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 20:16:58] 2025-10-14 00:16:43,390 | INFO     | traces error code: 0
[2025-10-13 20:16:58] 2025-10-14 00:16:43,390 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 20:16:58] 2025-10-14 00:16:57,181 | INFO     | PID=1007952 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 20:16:58] 2025-10-14 00:16:57,181 | INFO     | .. there are 24 such processes running
[2025-10-13 20:16:58] 2025-10-14 00:16:57,181 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 20:16:58] 2025-10-14 00:16:57,181 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 20:16:58] 2025-10-14 00:16:57,182 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 20:16:58] 2025-10-14 00:16:57,182 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 20:16:58] 2025-10-14 00:16:57,182 | CRITICAL | thread 'MainThread' is not alive
[2025-10-13 20:16:58] 2025-10-14 00:16:57,182 | INFO     | [monitor] control thread has ended
[2025-10-13 20:16:58] 2025-10-14 00:16:57,367 [wrapper] ==== pilot stdout END ====
[2025-10-13 20:16:58] 2025-10-14 00:16:57,370 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 20:16:58] 2025-10-14 00:16:57,372 [wrapper] pilotpid: 1007952
[2025-10-13 20:16:58] 2025-10-14 00:16:57,375 [wrapper] Pilot exit status: 0
[2025-10-13 20:16:58] 2025-10-14 00:16:57,389 [wrapper] pandaids: 6840969504
[2025-10-13 20:16:58] 2025-10-14 00:16:57,651 [wrapper] cleanup supervisor_pilot 1872693 1007953
[2025-10-13 20:16:58] 2025-10-14 00:16:57,686 [wrapper] Test setup, not cleaning
[2025-10-13 20:16:58] 2025-10-14 00:16:57,729 [wrapper] apfmon messages muted
[2025-10-13 20:16:58] 2025-10-14 00:16:57,751 [wrapper] ==== wrapper stdout END ====
[2025-10-13 20:16:58] 2025-10-14 00:16:57,782 [wrapper] ==== wrapper stderr END ====
[2025-10-13 20:16:58]  *** Error codes and diagnostics ***
[2025-10-13 20:16:58]     "exeErrorCode": 0,
[2025-10-13 20:16:58]     "exeErrorDiag": "",
[2025-10-13 20:16:58]     "pilotErrorCode": 0,
[2025-10-13 20:16:58]     "pilotErrorDiag": "",
[2025-10-13 20:16:58]  *** Listing of results directory ***
[2025-10-13 20:16:58] total 417276
[2025-10-13 20:16:58] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 19:11 pilot3.tar.gz
[2025-10-13 20:16:58] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:41 queuedata.json
[2025-10-13 20:16:58] -rwx------. 1 boincer umatlas     36292 Oct 12 19:41 runpilot2-wrapper.sh
[2025-10-13 20:16:58] -rw-r--r--. 1 boincer umatlas       100 Oct 13 14:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 20:16:58] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 14:27 run_atlas
[2025-10-13 20:16:58] -rw-r--r--. 1 boincer umatlas       105 Oct 13 14:27 job.xml
[2025-10-13 20:16:58] -rw-r--r--. 2 boincer umatlas 222045623 Oct 13 14:27 EVNT.46676267._004663.pool.root.1
[2025-10-13 20:16:58] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 14:27 shared
[2025-10-13 20:16:58] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 14:27 input.tar.gz
[2025-10-13 20:16:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 14:27 start_atlas.sh
[2025-10-13 20:16:58] -rw-r--r--. 1 boincer umatlas         0 Oct 13 14:27 boinc_lockfile
[2025-10-13 20:16:58] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 14:27 pandaJob.out
[2025-10-13 20:16:58] -rw-------. 1 boincer umatlas    972799 Oct 13 14:27 agis_schedconf.cvmfs.json
[2025-10-13 20:16:58] drwx------. 5 boincer umatlas      4096 Oct 13 14:27 pilot3
[2025-10-13 20:16:58] -rw-r--r--. 1 boincer umatlas      6656 Oct 13 20:09 init_data.xml
[2025-10-13 20:16:58] -rw-------. 1 boincer umatlas 194875031 Oct 13 20:15 HITS.46676269._092350.pool.root.1
[2025-10-13 20:16:58] -rw-r--r--. 1 boincer umatlas       531 Oct 13 20:15 boinc_task_state.xml
[2025-10-13 20:16:58] -rw-------. 1 boincer umatlas      1052 Oct 13 20:16 memory_monitor_summary.json
[2025-10-13 20:16:58] -rw-------. 1 boincer umatlas   1560580 Oct 13 20:16 agis_ddmendpoints.agis.ALL.json
[2025-10-13 20:16:58] -rw-------. 1 boincer umatlas    560075 Oct 13 20:16 log.46676269._092350.job.log.tgz.1
[2025-10-13 20:16:58] -rw-------. 1 boincer umatlas        95 Oct 13 20:16 pilot_heartbeat.json
[2025-10-13 20:16:58] -rw-------. 1 boincer umatlas      7822 Oct 13 20:16 heartbeat.json
[2025-10-13 20:16:58] -rw-r--r--. 1 boincer umatlas        28 Oct 13 20:16 wrapper_checkpoint.txt
[2025-10-13 20:16:58] -rw-------. 1 boincer umatlas       893 Oct 13 20:16 pilotlog.txt
[2025-10-13 20:16:58] -rw-------. 1 boincer umatlas   2678837 Oct 13 20:16 log.46676269._092350.job.log.1
[2025-10-13 20:16:58] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 20:16 boinc_mmap_file
[2025-10-13 20:16:58] -rw-------. 1 boincer umatlas       357 Oct 13 20:16 output.list
[2025-10-13 20:16:58] -rw-r--r--. 1 boincer umatlas       620 Oct 13 20:16 runtime_log
[2025-10-13 20:16:58] -rw-------. 1 boincer umatlas   3256320 Oct 13 20:16 result.tar.gz
[2025-10-13 20:16:58] -rw-------. 1 boincer umatlas       655 Oct 13 20:16 uVuLDmCsKS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmVIVMDmCfIXdm.diag
[2025-10-13 20:16:58] -rw-r--r--. 1 boincer umatlas      8689 Oct 13 20:16 runtime_log.err
[2025-10-13 20:16:58] -rw-r--r--. 1 boincer umatlas     21202 Oct 13 20:16 stderr.txt
[2025-10-13 20:16:58] HITS file was successfully produced:
[2025-10-13 20:16:58] -rw-------. 1 boincer umatlas 194875031 Oct 13 20:15 shared/HITS.pool.root.1
[2025-10-13 20:16:58]  *** Contents of shared directory: ***
[2025-10-13 20:16:58] total 410912
[2025-10-13 20:16:58] -rw-r--r--. 2 boincer umatlas 222045623 Oct 13 14:27 ATLAS.root_0
[2025-10-13 20:16:58] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 14:27 input.tar.gz
[2025-10-13 20:16:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 14:27 start_atlas.sh
[2025-10-13 20:16:58] -rw-------. 1 boincer umatlas 194875031 Oct 13 20:15 HITS.pool.root.1
[2025-10-13 20:16:58] -rw-------. 1 boincer umatlas   3256320 Oct 13 20:16 result.tar.gz
20:16:59 (1003954): run_atlas exited; CPU time 50715.699049
20:16:59 (1003954): called boinc_finish(0)

</stderr_txt>
]]>

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