Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:34 (1420246): wrapper (7.7.26015): starting
00:05:34 (1420246): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:05:34] Arguments: --nthreads 12
[2025-10-13 00:05:34] Threads: 12
[2025-10-13 00:05:34] Checking for CVMFS
[2025-10-13 00:05:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:05:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:05:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:05:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:05:36] 2.13.2.0 842134 130182 269592 151647 2 310 26908400 32935937 16548 16776704 0 170543656 99.560 196525775 30440 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:05:36] CVMFS is ok
[2025-10-13 00:05:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:05:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:05:36] Further information can be found at the LHC@home message board.
[2025-10-13 00:05:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:05:36] Checking for apptainer binary...
[2025-10-13 00:05:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:05:36] Running /usr/bin/apptainer --version
[2025-10-13 00:05:37] apptainer version 1.4.3-1.el9
[2025-10-13 00:05:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:05:38] c6-5-37-2.aglt2.org
[2025-10-13 00:05:38] apptainer works
[2025-10-13 00:05:38] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:05:38] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:05:38] Starting ATLAS job with PandaID=6841124745
[2025-10-13 00:05:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:12:21]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:12:21] 2025-10-13 12:42:51,697 | INFO     | intersect: -18045599123.552837
[2025-10-13 09:12:21] 2025-10-13 12:42:51,697 | INFO     | chi2: 6.219327960573146
[2025-10-13 09:12:21] 2025-10-13 12:42:51,698 | INFO     | sum of square deviations: 38528255784.92192
[2025-10-13 09:12:21] 2025-10-13 12:42:51,714 | INFO     | sum of deviations: 433956161908.23096
[2025-10-13 09:12:21] 2025-10-13 12:42:51,714 | INFO     | mean x: 1760343788.6252506
[2025-10-13 09:12:21] 2025-10-13 12:42:51,714 | INFO     | mean y: 2406723.1563126254
[2025-10-13 09:12:21] 2025-10-13 12:42:51,714 | INFO     | -- intersect: -19824912697.043495
[2025-10-13 09:12:21] 2025-10-13 12:42:51,714 | INFO     | intersect: -19824912697.043495
[2025-10-13 09:12:21] 2025-10-13 12:42:51,715 | INFO     | chi2: 5.521383043524047
[2025-10-13 09:12:21] 2025-10-13 12:42:51,716 | INFO     | current chi2=5.521383043524047 (change=11.222191874647175 %)
[2025-10-13 09:12:21] 2025-10-13 12:42:51,716 | INFO     | right removable region: 498
[2025-10-13 09:12:21] 2025-10-13 12:42:51,717 | INFO     | sum of square deviations: 38528125366.41266
[2025-10-13 09:12:21] 2025-10-13 12:42:51,736 | INFO     | sum of deviations: 255067662306.39706
[2025-10-13 09:12:21] 2025-10-13 12:42:51,736 | INFO     | mean x: 1760344093.6292586
[2025-10-13 09:12:21] 2025-10-13 12:42:51,736 | INFO     | mean y: 2423034.3426853707
[2025-10-13 09:12:21] 2025-10-13 12:42:51,736 | INFO     | -- intersect: -11651579036.786247
[2025-10-13 09:12:21] 2025-10-13 12:42:51,736 | INFO     | intersect: -11651579036.786247
[2025-10-13 09:12:21] 2025-10-13 12:42:51,745 | INFO     | chi2: 2.6678155166898154
[2025-10-13 09:12:21] 2025-10-13 12:42:51,746 | INFO     | current chi2=2.6678155166898154 (change=57.10444064692866 %)
[2025-10-13 09:12:21] 2025-10-13 12:42:51,746 | INFO     | sum of square deviations: 37381492474.44754
[2025-10-13 09:12:21] 2025-10-13 12:42:51,773 | INFO     | sum of deviations: 165590484392.26324
[2025-10-13 09:12:21] 2025-10-13 12:42:51,773 | INFO     | mean x: 1760344246.131579
[2025-10-13 09:12:21] 2025-10-13 12:42:51,774 | INFO     | mean y: 2434920.072874494
[2025-10-13 09:12:21] 2025-10-13 12:42:51,774 | INFO     | -- intersect: -7795441438.483878
[2025-10-13 09:12:21] 2025-10-13 12:42:51,774 | INFO     | intersect: -7795441438.483878
[2025-10-13 09:12:21] 2025-10-13 12:42:51,775 | INFO     | chi2: 1.4503397053040192
[2025-10-13 09:12:21] 2025-10-13 12:42:51,779 | INFO     | current chi2=1.4503397053040192 (change=45.63568221900221 %)
[2025-10-13 09:12:21] 2025-10-13 12:42:51,780 | INFO     | sum of square deviations: 36257836635.47638
[2025-10-13 09:12:21] 2025-10-13 12:42:51,799 | INFO     | sum of deviations: 110649419002.13492
[2025-10-13 09:12:21] 2025-10-13 12:42:51,799 | INFO     | mean x: 1760344398.633947
[2025-10-13 09:12:21] 2025-10-13 12:42:51,799 | INFO     | mean y: 2442373.8834355827
[2025-10-13 09:12:21] 2025-10-13 12:42:51,800 | INFO     | -- intersect: -5369667576.050141
[2025-10-13 09:12:21] 2025-10-13 12:42:51,800 | INFO     | intersect: -5369667576.050141
[2025-10-13 09:12:21] 2025-10-13 12:42:51,801 | INFO     | chi2: 1.0427598326675782
[2025-10-13 09:12:21] 2025-10-13 12:42:51,801 | INFO     | current chi2=1.0427598326675782 (change=28.102372923108 %)
[2025-10-13 09:12:21] 2025-10-13 12:42:51,814 | INFO     | sum of square deviations: 35156954994.27058
[2025-10-13 09:12:21] 2025-10-13 12:42:51,837 | INFO     | sum of deviations: 73964978699.26862
[2025-10-13 09:12:21] 2025-10-13 12:42:51,837 | INFO     | mean x: 1760344551.1342976
[2025-10-13 09:12:21] 2025-10-13 12:42:51,838 | INFO     | mean y: 2447456.995867769
[2025-10-13 09:12:21] 2025-10-13 12:42:51,838 | INFO     | -- intersect: -3701054374.9813566
[2025-10-13 09:12:21] 2025-10-13 12:42:51,838 | INFO     | intersect: -3701054374.9813566
[2025-10-13 09:12:21] 2025-10-13 12:42:51,839 | INFO     | chi2: 0.864966179651589
[2025-10-13 09:12:21] 2025-10-13 12:42:51,839 | INFO     | current chi2=0.864966179651589 (change=17.0502974362907 %)
[2025-10-13 09:12:21] 2025-10-13 12:42:51,839 | INFO     | left removable region: 40
[2025-10-13 09:12:21] 2025-10-13 12:42:51,840 | INFO     | sum of square deviations: 29790622222.57857
[2025-10-13 09:12:21] 2025-10-13 12:42:51,862 | INFO     | sum of deviations: 66272451116.17902
[2025-10-13 09:12:21] 2025-10-13 12:42:51,862 | INFO     | mean x: 1760344978.0982533
[2025-10-13 09:12:21] 2025-10-13 12:42:51,863 | INFO     | mean y: 2456938.9737991267
[2025-10-13 09:12:21] 2025-10-13 12:42:51,863 | INFO     | -- intersect: -3913620262.670156
[2025-10-13 09:12:21] 2025-10-13 12:42:51,863 | INFO     | intersect: -3913620262.670156
[2025-10-13 09:12:21] 2025-10-13 12:42:51,864 | INFO     | chi2: 0.03243054136018574
[2025-10-13 09:12:21] 2025-10-13 12:42:51,864 | INFO     | -- intersect: -3913620262.670156
[2025-10-13 09:12:21] 2025-10-13 12:42:51,864 | INFO     | current memory leak: 2.22 B/s (using 458 data points, chi2=0.03)
[2025-10-13 09:12:21] 2025-10-13 12:42:51,873 | INFO     | could have reported an average CPU frequency of 2592 MHz (20 samples)
[2025-10-13 09:12:21] 2025-10-13 12:42:51,874 | INFO     | ..............................
[2025-10-13 09:12:21] 2025-10-13 12:42:51,874 | INFO     | . Timing measurements:
[2025-10-13 09:12:21] 2025-10-13 12:42:51,874 | INFO     | . get job = 0 s
[2025-10-13 09:12:21] 2025-10-13 12:42:51,874 | INFO     | . initial setup = 5 s
[2025-10-13 09:12:21] 2025-10-13 12:42:51,874 | INFO     | . payload setup = 65 s
[2025-10-13 09:12:21] 2025-10-13 12:42:51,875 | INFO     | . stage-in = 0 s
[2025-10-13 09:12:21] 2025-10-13 12:42:51,875 | INFO     | . payload execution = 30760 s
[2025-10-13 09:12:21] 2025-10-13 12:42:51,875 | INFO     | . stage-out = 5 s
[2025-10-13 09:12:21] 2025-10-13 12:42:51,875 | INFO     | . log creation = 1 s
[2025-10-13 09:12:21] 2025-10-13 12:42:51,875 | INFO     | ..............................
[2025-10-13 09:12:21] 2025-10-13 12:42:52,042 | INFO     | 
[2025-10-13 09:12:21] 2025-10-13 12:42:52,043 | INFO     | job summary report
[2025-10-13 09:12:21] 2025-10-13 12:42:52,043 | INFO     | --------------------------------------------------
[2025-10-13 09:12:21] 2025-10-13 12:42:52,043 | INFO     | PanDA job id: 6841124745
[2025-10-13 09:12:21] 2025-10-13 12:42:52,043 | INFO     | task id: 46676269
[2025-10-13 09:12:21] 2025-10-13 12:42:52,043 | INFO     | errors: (none)
[2025-10-13 09:12:21] 2025-10-13 12:42:52,043 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:12:21] 2025-10-13 12:42:52,043 | INFO     | pilot state: finished 
[2025-10-13 09:12:21] 2025-10-13 12:42:52,043 | INFO     | transexitcode: 0
[2025-10-13 09:12:21] 2025-10-13 12:42:52,043 | INFO     | exeerrorcode: 0
[2025-10-13 09:12:21] 2025-10-13 12:42:52,043 | INFO     | exeerrordiag: 
[2025-10-13 09:12:21] 2025-10-13 12:42:52,043 | INFO     | exitcode: 0
[2025-10-13 09:12:21] 2025-10-13 12:42:52,043 | INFO     | exitmsg: OK
[2025-10-13 09:12:21] 2025-10-13 12:42:52,043 | INFO     | cpuconsumptiontime: 46473 s
[2025-10-13 09:12:21] 2025-10-13 12:42:52,043 | INFO     | nevents: 400
[2025-10-13 09:12:21] 2025-10-13 12:42:52,044 | INFO     | neventsw: 0
[2025-10-13 09:12:21] 2025-10-13 12:42:52,044 | INFO     | pid: 1449811
[2025-10-13 09:12:21] 2025-10-13 12:42:52,044 | INFO     | pgrp: 1449811
[2025-10-13 09:12:21] 2025-10-13 12:42:52,044 | INFO     | corecount: 12
[2025-10-13 09:12:21] 2025-10-13 12:42:52,044 | INFO     | event service: False
[2025-10-13 09:12:21] 2025-10-13 12:42:52,044 | INFO     | sizes: {0: 2348633, 1: 2348661, 2: 2348832, 12: 2348860, 23: 2348888, 33: 2349178, 34: 2349362, 30830: 2387523, 30831: 2387522, 30836: 2396576, 30837: 2396632, 308
[2025-10-13 09:12:21] 2025-10-13 12:42:52,044 | INFO     | --------------------------------------------------
[2025-10-13 09:12:21] 2025-10-13 12:42:52,044 | INFO     | 
[2025-10-13 09:12:21] 2025-10-13 12:42:52,044 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 09:12:21] 2025-10-13 12:42:52,587 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:12:21] 2025-10-13 12:42:52,588 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:12:21] 2025-10-13 12:42:52,588 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:12:21] 2025-10-13 12:42:52,588 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:12:21] 2025-10-13 12:42:52,588 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:12:21] 2025-10-13 12:42:52,588 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:12:21] 2025-10-13 12:42:52,588 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:12:21] 2025-10-13 12:42:52,588 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:12:21] 2025-10-13 12:42:52,588 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:12:21] 2025-10-13 12:42:52,588 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:12:21] 2025-10-13 12:42:52,588 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:12:21] 2025-10-13 12:42:52,588 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:12:21] 2025-10-13 12:42:52,588 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:12:21] 2025-10-13 12:42:52,589 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:12:21] 2025-10-13 12:42:52,589 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:12:21] 2025-10-13 12:42:52,589 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:12:21] 2025-10-13 12:42:52,589 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:12:21] 2025-10-13 12:42:52,589 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:12:21] 2025-10-13 12:42:52,589 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:12:21] 2025-10-13 12:42:52,589 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:12:21] 2025-10-13 12:42:52,589 | INFO     | job 6841124745 has completed (purged errors)
[2025-10-13 09:12:21] 2025-10-13 12:42:52,589 | INFO     | overall cleanup function is called
[2025-10-13 09:12:21] 2025-10-13 12:42:53,602 | INFO     | --- collectZombieJob: --- 10, [1449811]
[2025-10-13 09:12:21] 2025-10-13 12:42:53,602 | INFO     | zombie collector waiting for pid 1449811
[2025-10-13 09:12:21] 2025-10-13 12:42:53,602 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:12:21] 2025-10-13 12:42:53,603 | INFO     | collected zombie processes
[2025-10-13 09:12:21] 2025-10-13 12:42:53,603 | INFO     | will attempt to kill all subprocesses of pid=1449811
[2025-10-13 09:12:21] 2025-10-13 12:42:54,992 | INFO     | process IDs to be killed: [1449811] (in reverse order)
[2025-10-13 09:12:21] 2025-10-13 12:42:55,186 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:12:21] 2025-10-13 12:42:55,187 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:12:21] 2025-10-13 12:42:55,201 | INFO     | did not find any defunct processes belonging to 1449811
[2025-10-13 09:12:21] 2025-10-13 12:42:55,213 | INFO     | did not find any defunct processes belonging to 1449811
[2025-10-13 09:12:21] 2025-10-13 12:42:55,214 | INFO     | ready for new job
[2025-10-13 09:12:21] 2025-10-13 12:42:55,214 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:12:21] 2025-10-13 12:42:55,218 | INFO     | ***************************************
[2025-10-13 09:12:21] 2025-10-13 12:42:55,218 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:12:21] 2025-10-13 12:42:55,218 | INFO     | ***************************************
[2025-10-13 09:12:21] 2025-10-13 12:42:55,218 | INFO     | 
[2025-10-13 09:12:21] 2025-10-13 12:42:55,235 | INFO     | architecture information:
[2025-10-13 09:12:21] 2025-10-13 12:42:55,243 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:12:21] 2025-10-13 12:42:55,392 | INFO     | cat /etc/os-release:
[2025-10-13 09:12:21] NAME="CentOS Linux"
[2025-10-13 09:12:21] VERSION="7 (Core)"
[2025-10-13 09:12:21] ID="centos"
[2025-10-13 09:12:21] ID_LIKE="rhel fedora"
[2025-10-13 09:12:21] VERSION_ID="7"
[2025-10-13 09:12:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:12:21] ANSI_COLOR="0;31"
[2025-10-13 09:12:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:12:21] HOME_URL="https://www.centos.org/"
[2025-10-13 09:12:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:12:21] 
[2025-10-13 09:12:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:12:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:12:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:12:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:12:21] 
[2025-10-13 09:12:21] 2025-10-13 12:42:55,392 | INFO     | ***************************************
[2025-10-13 09:12:21] 2025-10-13 12:42:55,895 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 09:12:21] 2025-10-13 12:42:56,001 | INFO     | sufficient remaining disk space (75454480384 B)
[2025-10-13 09:12:21] 2025-10-13 12:42:56,001 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:12:21] 2025-10-13 12:42:56,001 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:12:21] 2025-10-13 12:42:56,001 | INFO     | update_server=False
[2025-10-13 09:12:21] 2025-10-13 12:42:56,001 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:12:21] 2025-10-13 12:42:56,002 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:12:21] 2025-10-13 12:42:56,002 | INFO     | aborting loop
[2025-10-13 09:12:21] 2025-10-13 12:42:56,002 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:12:21] 2025-10-13 12:42:56,210 | INFO     | all payload control threads have been joined
[2025-10-13 09:12:21] 2025-10-13 12:42:57,007 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:12:21] 2025-10-13 12:42:57,024 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:12:21] 2025-10-13 12:42:57,046 | INFO     | all data control threads have been joined
[2025-10-13 09:12:21] 2025-10-13 12:42:57,086 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:12:21] 2025-10-13 12:42:57,234 | INFO     | [payload] control thread has finished
[2025-10-13 09:12:21] 2025-10-13 12:42:57,391 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:12:21] 2025-10-13 12:42:57,503 | INFO     | all job control threads have been joined
[2025-10-13 09:12:21] 2025-10-13 12:42:57,761 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:12:21] 2025-10-13 12:42:57,762 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:12:21] 2025-10-13 12:42:57,774 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:12:21] 2025-10-13 12:42:57,858 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:12:21] 2025-10-13 12:42:58,034 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:12:21] 2025-10-13 12:42:58,059 | INFO     | [data] control thread has finished
[2025-10-13 09:12:21] 2025-10-13 12:42:58,093 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:12:21] 2025-10-13 12:42:58,397 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:12:21] 2025-10-13 12:42:58,398 | INFO     | [job] validate thread has finished
[2025-10-13 09:12:21] 2025-10-13 12:42:58,509 | INFO     | [job] control thread has finished
[2025-10-13 09:12:21] 2025-10-13 12:42:58,841 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:12:21] 2025-10-13 12:43:02,849 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:12:21] 2025-10-13 12:43:06,827 | INFO     | job.realtimelogging is not enabled
[2025-10-13 09:12:21] 2025-10-13 12:43:07,833 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:12:21] 2025-10-13 12:43:24,697 | INFO     | PID=1428450 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 09:12:21] 2025-10-13 12:43:24,697 | INFO     | .. there are 16 such processes running
[2025-10-13 09:12:21] 2025-10-13 12:43:24,698 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:12:21] 2025-10-13 12:43:24,699 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:12:21] 2025-10-13 12:43:24,699 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:12:21] 2025-10-13 12:43:55,588 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:12:21] 2025-10-13 12:43:57,258 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140597857302336)>', '<ExcThread(monitor, started 140597222434560)>']
[2025-10-13 09:12:21] 2025-10-13 12:43:57,967 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:12:21] 2025-10-13 12:43:57,967 | INFO     | [monitor] control thread has ended
[2025-10-13 09:12:21] 2025-10-13 12:44:02,283 | INFO     | all workflow threads have been joined
[2025-10-13 09:12:21] 2025-10-13 12:44:02,283 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:12:21] 2025-10-13 12:44:02,284 | INFO     | traces error code: 0
[2025-10-13 09:12:21] 2025-10-13 12:44:02,284 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:12:21] 2025-10-13 12:44:03,367 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:12:21] 2025-10-13 12:44:03,386 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:12:21] 2025-10-13 12:44:03,423 [wrapper] pilotpid: 1428450
[2025-10-13 09:12:21] 2025-10-13 12:44:03,474 [wrapper] Pilot exit status: 0
[2025-10-13 09:12:21] 2025-10-13 12:44:03,594 [wrapper] pandaids: 6841124745
[2025-10-13 09:12:21] 2025-10-13 12:44:03,710 [wrapper] cleanup supervisor_pilot 2681976 1428451
[2025-10-13 09:12:21] 2025-10-13 12:44:03,715 [wrapper] Test setup, not cleaning
[2025-10-13 09:12:21] 2025-10-13 12:44:03,736 [wrapper] apfmon messages muted
[2025-10-13 09:12:21] 2025-10-13 12:44:03,750 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:12:21] 2025-10-13 12:44:03,784 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:12:21]  *** Error codes and diagnostics ***
[2025-10-13 09:12:21]     "exeErrorCode": 0,
[2025-10-13 09:12:21]     "exeErrorDiag": "",
[2025-10-13 09:12:21]     "pilotErrorCode": 0,
[2025-10-13 09:12:21]     "pilotErrorDiag": "",
[2025-10-13 09:12:21]  *** Listing of results directory ***
[2025-10-13 09:12:21] total 411540
[2025-10-13 09:12:21] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 22:00 pilot3.tar.gz
[2025-10-13 09:12:21] -rwx------. 1 boincer umatlas     36292 Oct 12 22:07 runpilot2-wrapper.sh
[2025-10-13 09:12:21] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 22:07 queuedata.json
[2025-10-13 09:12:21] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:12:21] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:05 run_atlas
[2025-10-13 09:12:21] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:05 job.xml
[2025-10-13 09:12:21] -rw-r--r--. 2 boincer umatlas 219947072 Oct 13 00:05 EVNT.46676267._004851.pool.root.1
[2025-10-13 09:12:21] -rw-r--r--. 2 boincer umatlas    569671 Oct 13 00:05 input.tar.gz
[2025-10-13 09:12:21] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:05 start_atlas.sh
[2025-10-13 09:12:21] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:05 shared
[2025-10-13 09:12:21] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:05 boinc_lockfile
[2025-10-13 09:12:21] -rw-r--r--. 1 boincer umatlas      2548 Oct 13 00:05 pandaJob.out
[2025-10-13 09:12:21] -rw-------. 1 boincer umatlas    974373 Oct 13 00:06 agis_schedconf.cvmfs.json
[2025-10-13 09:12:21] drwx------. 5 boincer umatlas      4096 Oct 13 00:07 pilot3
[2025-10-13 09:12:21] -rw-------. 1 boincer umatlas 188452832 Oct 13 08:40 HITS.46676269._094612.pool.root.1
[2025-10-13 09:12:21] -rw-r--r--. 1 boincer umatlas       531 Oct 13 08:40 boinc_task_state.xml
[2025-10-13 09:12:21] -rw-------. 1 boincer umatlas      1041 Oct 13 08:41 memory_monitor_summary.json
[2025-10-13 09:12:21] -rw-------. 1 boincer umatlas   1560580 Oct 13 08:42 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:12:21] -rw-------. 1 boincer umatlas    723549 Oct 13 08:42 log.46676269._094612.job.log.tgz.1
[2025-10-13 09:12:21] -rw-------. 1 boincer umatlas      7825 Oct 13 08:42 heartbeat.json
[2025-10-13 09:12:21] -rw-------. 1 boincer umatlas        95 Oct 13 08:43 pilot_heartbeat.json
[2025-10-13 09:12:21] -rw-------. 1 boincer umatlas      4896 Oct 13 08:44 pilotlog.txt
[2025-10-13 09:12:21] -rw-------. 1 boincer umatlas   3830486 Oct 13 08:44 log.46676269._094612.job.log.1
[2025-10-13 09:12:21] -rw-------. 1 boincer umatlas       357 Oct 13 08:44 output.list
[2025-10-13 09:12:21] -rw-r--r--. 1 boincer umatlas       620 Oct 13 08:44 runtime_log
[2025-10-13 09:12:21] -rw-------. 1 boincer umatlas   4577280 Oct 13 08:44 result.tar.gz
[2025-10-13 09:12:21] -rw-r--r--. 1 boincer umatlas      8711 Oct 13 08:44 runtime_log.err
[2025-10-13 09:12:21] -rw-------. 1 boincer umatlas       660 Oct 13 08:44 KhjLDm88MS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmcUVMDmMZXCXo.diag
[2025-10-13 09:12:21] -rw-r--r--. 1 boincer umatlas      6844 Oct 13 09:11 init_data.xml
[2025-10-13 09:12:21] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 09:12 boinc_mmap_file
[2025-10-13 09:12:21] -rw-r--r--. 1 boincer umatlas        28 Oct 13 09:12 wrapper_checkpoint.txt
[2025-10-13 09:12:21] -rw-r--r--. 1 boincer umatlas     21038 Oct 13 09:12 stderr.txt
[2025-10-13 09:12:22] HITS file was successfully produced:
[2025-10-13 09:12:22] -rw-------. 1 boincer umatlas 188452832 Oct 13 08:40 shared/HITS.pool.root.1
[2025-10-13 09:12:22]  *** Contents of shared directory: ***
[2025-10-13 09:12:22] total 403888
[2025-10-13 09:12:22] -rw-r--r--. 2 boincer umatlas 219947072 Oct 13 00:05 ATLAS.root_0
[2025-10-13 09:12:22] -rw-r--r--. 2 boincer umatlas    569671 Oct 13 00:05 input.tar.gz
[2025-10-13 09:12:22] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:05 start_atlas.sh
[2025-10-13 09:12:22] -rw-------. 1 boincer umatlas 188452832 Oct 13 08:40 HITS.pool.root.1
[2025-10-13 09:12:22] -rw-------. 1 boincer umatlas   4577280 Oct 13 08:44 result.tar.gz
09:12:23 (1420246): run_atlas exited; CPU time 47359.869295
09:12:23 (1420246): called boinc_finish(0)

</stderr_txt>
]]>

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