Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:09:41 (938811): wrapper (7.7.26015): starting
00:09:41 (938811): wrapper: running run_atlas (--nthreads 11)
[2025-10-13 00:09:41] Arguments: --nthreads 11
[2025-10-13 00:09:41] Threads: 11
[2025-10-13 00:09:41] Checking for CVMFS
[2025-10-13 00:09:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:09:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:09:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:09:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:09:44] 2.13.2.0 130251 118518 449000 151647 1 441 25840784 40960000 14585 16776704 0 106715097 99.567 122573438 31194 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:09:44] CVMFS is ok
[2025-10-13 00:09:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:09:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:09:44] Further information can be found at the LHC@home message board.
[2025-10-13 00:09:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:09:44] Checking for apptainer binary...
[2025-10-13 00:09:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:09:44] Running /usr/bin/apptainer --version
[2025-10-13 00:09:44] apptainer version 1.4.3-1.el9
[2025-10-13 00:09:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:09:46] c-210-8.aglt2.org
[2025-10-13 00:09:46] apptainer works
[2025-10-13 00:09:46] Set ATHENA_PROC_NUMBER=11
[2025-10-13 00:09:46] Set ATHENA_CORE_NUMBER=11
[2025-10-13 00:09:46] Starting ATLAS job with PandaID=6840969190
[2025-10-13 00:09:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:54:47]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:54:48] 2025-10-13 11:24:09,598 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 12:54:48] 2025-10-13 11:24:09,976 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 12:54:48] 2025-10-13 11:24:10,119 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2454.7889375
[2025-10-13 12:54:48] 2025-10-13 11:24:10,175 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6840969190/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 12:54:48] 2025-10-13 11:24:10,176 | INFO     | extracted standard info from prmon json
[2025-10-13 12:54:48] 2025-10-13 11:24:10,176 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 12:54:48] 2025-10-13 11:24:10,176 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 12:54:48] 2025-10-13 11:24:10,176 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 12:54:48] 2025-10-13 11:24:10,177 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 12:54:48] 2025-10-13 11:24:10,270 | INFO     | fitting pss+swap vs Time
[2025-10-13 12:54:48] 2025-10-13 11:24:10,271 | INFO     | sum of square deviations: 23308597825.5
[2025-10-13 12:54:48] 2025-10-13 11:24:10,369 | INFO     | sum of deviations: -27319530251.0
[2025-10-13 12:54:48] 2025-10-13 11:24:10,370 | INFO     | mean x: 1760341714.5
[2025-10-13 12:54:48] 2025-10-13 11:24:10,370 | INFO     | mean y: 2645805.1753554503
[2025-10-13 12:54:48] 2025-10-13 11:24:10,370 | INFO     | -- intersect: 2065906284.4808424
[2025-10-13 12:54:48] 2025-10-13 11:24:10,370 | INFO     | intersect: 2065906284.4808424
[2025-10-13 12:54:48] 2025-10-13 11:24:10,371 | INFO     | chi2: 3.1873245046378287
[2025-10-13 12:54:48] 2025-10-13 11:24:10,372 | INFO     | sum of square deviations: 22490319311.760273
[2025-10-13 12:54:48] 2025-10-13 11:24:10,382 | INFO     | sum of deviations: -205807096.2350079
[2025-10-13 12:54:48] 2025-10-13 11:24:10,383 | INFO     | mean x: 1760341562.0239809
[2025-10-13 12:54:48] 2025-10-13 11:24:10,383 | INFO     | mean y: 2650808.623501199
[2025-10-13 12:54:48] 2025-10-13 11:24:10,383 | INFO     | -- intersect: 18759552.133981746
[2025-10-13 12:54:48] 2025-10-13 11:24:10,383 | INFO     | intersect: 18759552.133981746
[2025-10-13 12:54:48] 2025-10-13 11:24:10,384 | INFO     | chi2: 2.4919585081317406
[2025-10-13 12:54:48] 2025-10-13 11:24:10,384 | INFO     | current chi2=2.4919585081317406 (change=21.816604976815864 %)
[2025-10-13 12:54:48] 2025-10-13 11:24:10,384 | INFO     | right removable region: 416
[2025-10-13 12:54:48] 2025-10-13 11:24:10,385 | INFO     | sum of square deviations: 22489675372.460373
[2025-10-13 12:54:48] 2025-10-13 11:24:10,390 | INFO     | sum of deviations: -123137154490.53963
[2025-10-13 12:54:48] 2025-10-13 11:24:10,390 | INFO     | mean x: 1760341867.0359712
[2025-10-13 12:54:48] 2025-10-13 11:24:10,390 | INFO     | mean y: 2663588.035971223
[2025-10-13 12:54:48] 2025-10-13 11:24:10,390 | INFO     | -- intersect: 9641019182.212757
[2025-10-13 12:54:48] 2025-10-13 11:24:10,390 | INFO     | intersect: 9641019182.212757
[2025-10-13 12:54:48] 2025-10-13 11:24:10,391 | INFO     | chi2: 1.0482563976907948
[2025-10-13 12:54:48] 2025-10-13 11:24:10,391 | INFO     | current chi2=1.0482563976907948 (change=67.11171403584754 %)
[2025-10-13 12:54:48] 2025-10-13 11:24:10,392 | INFO     | sum of square deviations: 21690148630.81566
[2025-10-13 12:54:48] 2025-10-13 11:24:10,404 | INFO     | sum of deviations: -135398262976.03873
[2025-10-13 12:54:48] 2025-10-13 11:24:10,404 | INFO     | mean x: 1760342019.5728154
[2025-10-13 12:54:48] 2025-10-13 11:24:10,404 | INFO     | mean y: 2665915.067961165
[2025-10-13 12:54:48] 2025-10-13 11:24:10,404 | INFO     | -- intersect: 10991398899.37154
[2025-10-13 12:54:48] 2025-10-13 11:24:10,405 | INFO     | intersect: 10991398899.37154
[2025-10-13 12:54:48] 2025-10-13 11:24:10,405 | INFO     | chi2: 0.9816319770335593
[2025-10-13 12:54:48] 2025-10-13 11:24:10,405 | INFO     | current chi2=0.9816319770335593 (change=6.35573708913225 %)
[2025-10-13 12:54:48] 2025-10-13 11:24:10,406 | INFO     | left removable region: 20
[2025-10-13 12:54:48] 2025-10-13 11:24:10,406 | INFO     | sum of square deviations: 19260146722.977215
[2025-10-13 12:54:48] 2025-10-13 11:24:10,451 | INFO     | sum of deviations: -84204993465.3562
[2025-10-13 12:54:48] 2025-10-13 11:24:10,451 | INFO     | mean x: 1760342141.6742425
[2025-10-13 12:54:48] 2025-10-13 11:24:10,452 | INFO     | mean y: 2666518.8964646463
[2025-10-13 12:54:48] 2025-10-13 11:24:10,452 | INFO     | -- intersect: 7698848727.084623
[2025-10-13 12:54:48] 2025-10-13 11:24:10,452 | INFO     | intersect: 7698848727.084623
[2025-10-13 12:54:48] 2025-10-13 11:24:10,461 | INFO     | chi2: 0.24635247346431055
[2025-10-13 12:54:48] 2025-10-13 11:24:10,461 | INFO     | -- intersect: 7698848727.084623
[2025-10-13 12:54:48] 2025-10-13 11:24:10,461 | INFO     | current memory leak: -4.37 B/s (using 396 data points, chi2=0.25)
[2025-10-13 12:54:48] 2025-10-13 11:24:10,462 | INFO     | could have reported an average CPU frequency of 2474 MHz (17 samples)
[2025-10-13 12:54:48] 2025-10-13 11:24:10,462 | INFO     | ..............................
[2025-10-13 12:54:48] 2025-10-13 11:24:10,462 | INFO     | . Timing measurements:
[2025-10-13 12:54:48] 2025-10-13 11:24:10,462 | INFO     | . get job = 4 s
[2025-10-13 12:54:48] 2025-10-13 11:24:10,463 | INFO     | . initial setup = 9 s
[2025-10-13 12:54:48] 2025-10-13 11:24:10,463 | INFO     | . payload setup = 52 s
[2025-10-13 12:54:48] 2025-10-13 11:24:10,463 | INFO     | . stage-in = 0 s
[2025-10-13 12:54:48] 2025-10-13 11:24:10,463 | INFO     | . payload execution = 25753 s
[2025-10-13 12:54:48] 2025-10-13 11:24:10,463 | INFO     | . stage-out = 7 s
[2025-10-13 12:54:48] 2025-10-13 11:24:10,463 | INFO     | . log creation = 0 s
[2025-10-13 12:54:48] 2025-10-13 11:24:10,463 | INFO     | ..............................
[2025-10-13 12:54:48] 2025-10-13 11:24:11,124 | INFO     | 
[2025-10-13 12:54:48] 2025-10-13 11:24:11,125 | INFO     | job summary report
[2025-10-13 12:54:48] 2025-10-13 11:24:11,125 | INFO     | --------------------------------------------------
[2025-10-13 12:54:48] 2025-10-13 11:24:11,125 | INFO     | PanDA job id: 6840969190
[2025-10-13 12:54:48] 2025-10-13 11:24:11,125 | INFO     | task id: 46676269
[2025-10-13 12:54:48] 2025-10-13 11:24:11,125 | INFO     | errors: (none)
[2025-10-13 12:54:48] 2025-10-13 11:24:11,125 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 12:54:48] 2025-10-13 11:24:11,125 | INFO     | pilot state: finished 
[2025-10-13 12:54:48] 2025-10-13 11:24:11,125 | INFO     | transexitcode: 0
[2025-10-13 12:54:48] 2025-10-13 11:24:11,126 | INFO     | exeerrorcode: 0
[2025-10-13 12:54:48] 2025-10-13 11:24:11,126 | INFO     | exeerrordiag: 
[2025-10-13 12:54:48] 2025-10-13 11:24:11,126 | INFO     | exitcode: 0
[2025-10-13 12:54:48] 2025-10-13 11:24:11,126 | INFO     | exitmsg: OK
[2025-10-13 12:54:48] 2025-10-13 11:24:11,126 | INFO     | cpuconsumptiontime: 63707 s
[2025-10-13 12:54:48] 2025-10-13 11:24:11,126 | INFO     | nevents: 400
[2025-10-13 12:54:48] 2025-10-13 11:24:11,126 | INFO     | neventsw: 0
[2025-10-13 12:54:48] 2025-10-13 11:24:11,126 | INFO     | pid: 965160
[2025-10-13 12:54:48] 2025-10-13 11:24:11,127 | INFO     | pgrp: 965160
[2025-10-13 12:54:48] 2025-10-13 11:24:11,127 | INFO     | corecount: 11
[2025-10-13 12:54:48] 2025-10-13 11:24:11,127 | INFO     | event service: False
[2025-10-13 12:54:48] 2025-10-13 11:24:11,127 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348714, 3: 2348941, 4: 2348941, 16: 2348969, 27: 2349125, 38: 2349153, 49: 2349471, 61: 2349471, 25812: 2384856, 25813: 2385135
[2025-10-13 12:54:48] 2025-10-13 11:24:11,127 | INFO     | --------------------------------------------------
[2025-10-13 12:54:48] 2025-10-13 11:24:11,127 | INFO     | 
[2025-10-13 12:54:48] 2025-10-13 11:24:11,127 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 12:54:48] 2025-10-13 11:24:11,301 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 12:54:48] 2025-10-13 11:24:11,301 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 12:54:48] 2025-10-13 11:24:11,301 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 12:54:48] 2025-10-13 11:24:11,302 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 12:54:48] 2025-10-13 11:24:11,302 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 12:54:48] 2025-10-13 11:24:11,302 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 12:54:48] 2025-10-13 11:24:11,302 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 12:54:48] 2025-10-13 11:24:11,302 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 12:54:48] 2025-10-13 11:24:11,302 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 12:54:48] 2025-10-13 11:24:11,302 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 12:54:48] 2025-10-13 11:24:11,303 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 12:54:48] 2025-10-13 11:24:11,303 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 12:54:48] 2025-10-13 11:24:11,303 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 12:54:48] 2025-10-13 11:24:11,303 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 12:54:48] 2025-10-13 11:24:11,303 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 12:54:48] 2025-10-13 11:24:11,303 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 12:54:48] 2025-10-13 11:24:11,303 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 12:54:48] 2025-10-13 11:24:11,304 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 12:54:48] 2025-10-13 11:24:11,304 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 12:54:48] 2025-10-13 11:24:11,304 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 12:54:48] 2025-10-13 11:24:11,328 | INFO     | job 6840969190 has completed (purged errors)
[2025-10-13 12:54:48] 2025-10-13 11:24:11,329 | INFO     | overall cleanup function is called
[2025-10-13 12:54:48] 2025-10-13 11:24:12,344 | INFO     | --- collectZombieJob: --- 10, [965160]
[2025-10-13 12:54:48] 2025-10-13 11:24:12,345 | INFO     | zombie collector waiting for pid 965160
[2025-10-13 12:54:48] 2025-10-13 11:24:12,345 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 12:54:48] 2025-10-13 11:24:12,345 | INFO     | collected zombie processes
[2025-10-13 12:54:48] 2025-10-13 11:24:12,345 | INFO     | will attempt to kill all subprocesses of pid=965160
[2025-10-13 12:54:48] 2025-10-13 11:24:13,266 | INFO     | process IDs to be killed: [965160] (in reverse order)
[2025-10-13 12:54:48] 2025-10-13 11:24:13,468 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 12:54:48] 2025-10-13 11:24:13,469 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 12:54:48] 2025-10-13 11:24:13,490 | INFO     | did not find any defunct processes belonging to 965160
[2025-10-13 12:54:48] 2025-10-13 11:24:13,551 | INFO     | did not find any defunct processes belonging to 965160
[2025-10-13 12:54:48] 2025-10-13 11:24:13,551 | INFO     | ready for new job
[2025-10-13 12:54:48] 2025-10-13 11:24:13,552 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 12:54:48] 2025-10-13 11:24:13,580 | INFO     | ***************************************
[2025-10-13 12:54:48] 2025-10-13 11:24:13,580 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 12:54:48] 2025-10-13 11:24:13,580 | INFO     | ***************************************
[2025-10-13 12:54:48] 2025-10-13 11:24:13,581 | INFO     | 
[2025-10-13 12:54:48] 2025-10-13 11:24:13,596 | INFO     | architecture information:
[2025-10-13 12:54:48] 2025-10-13 11:24:13,615 | INFO     | executing command: cat /etc/os-release
[2025-10-13 12:54:48] 2025-10-13 11:24:13,780 | INFO     | cat /etc/os-release:
[2025-10-13 12:54:48] NAME="CentOS Linux"
[2025-10-13 12:54:48] VERSION="7 (Core)"
[2025-10-13 12:54:48] ID="centos"
[2025-10-13 12:54:48] ID_LIKE="rhel fedora"
[2025-10-13 12:54:48] VERSION_ID="7"
[2025-10-13 12:54:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 12:54:48] ANSI_COLOR="0;31"
[2025-10-13 12:54:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 12:54:48] HOME_URL="https://www.centos.org/"
[2025-10-13 12:54:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 12:54:48] 
[2025-10-13 12:54:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 12:54:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 12:54:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 12:54:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 12:54:48] 
[2025-10-13 12:54:48] 2025-10-13 11:24:13,780 | INFO     | ***************************************
[2025-10-13 12:54:48] 2025-10-13 11:24:14,283 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 12:54:48] 2025-10-13 11:24:14,478 | INFO     | sufficient remaining disk space (62701699072 B)
[2025-10-13 12:54:48] 2025-10-13 11:24:14,511 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 12:54:48] 2025-10-13 11:24:14,511 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 12:54:48] 2025-10-13 11:24:14,511 | INFO     | update_server=False
[2025-10-13 12:54:48] 2025-10-13 11:24:14,511 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 12:54:48] 2025-10-13 11:24:14,581 | INFO     | all job control threads have been joined
[2025-10-13 12:54:48] 2025-10-13 11:24:14,627 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 12:54:48] 2025-10-13 11:24:14,628 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 12:54:48] 2025-10-13 11:24:14,628 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:54:48] 2025-10-13 11:24:14,628 | INFO     | will abort loop
[2025-10-13 12:54:48] 2025-10-13 11:24:15,091 | INFO     | all payload control threads have been joined
[2025-10-13 12:54:48] 2025-10-13 11:24:15,389 | INFO     | all data control threads have been joined
[2025-10-13 12:54:48] 2025-10-13 11:24:15,516 | INFO     | [job] retrieve thread has finished
[2025-10-13 12:54:48] 2025-10-13 11:24:15,587 | INFO     | [job] control thread has finished
[2025-10-13 12:54:48] 2025-10-13 11:24:15,614 | INFO     | [job] validate thread has finished
[2025-10-13 12:54:48] 2025-10-13 11:24:15,618 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 12:54:48] 2025-10-13 11:24:15,633 | INFO     | [job] job monitor thread has finished
[2025-10-13 12:54:48] 2025-10-13 11:24:15,684 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 12:54:48] 2025-10-13 11:24:15,691 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 12:54:48] 2025-10-13 11:24:15,830 | INFO     | [payload] failed_post thread has finished
[2025-10-13 12:54:48] 2025-10-13 11:24:15,958 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 12:54:48] 2025-10-13 11:24:16,097 | INFO     | [payload] control thread has finished
[2025-10-13 12:54:48] 2025-10-13 11:24:16,183 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:54:48] 2025-10-13 11:24:16,395 | INFO     | [data] control thread has finished
[2025-10-13 12:54:48] 2025-10-13 11:24:16,402 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 12:54:48] 2025-10-13 11:24:16,711 | INFO     | [data] copytool_in thread has finished
[2025-10-13 12:54:48] 2025-10-13 11:24:16,968 | INFO     | [payload] validate_post thread has finished
[2025-10-13 12:54:48] 2025-10-13 11:24:17,044 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:54:48] 2025-10-13 11:24:17,189 | INFO     | [job] queue monitor thread has finished
[2025-10-13 12:54:48] 2025-10-13 11:24:17,965 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:54:48] 2025-10-13 11:24:21,053 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:54:48] 2025-10-13 11:24:43,738 | INFO     | PID=951548 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 12:54:48] 2025-10-13 11:24:43,738 | INFO     | .. there are 17 such processes running
[2025-10-13 12:54:48] 2025-10-13 11:24:43,738 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:54:48] 2025-10-13 11:24:43,739 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:54:48] 2025-10-13 11:24:43,739 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:54:48] 2025-10-13 11:25:03,868 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:54:48] 2025-10-13 11:25:04,405 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140597524805440)>', '<ExcThread(monitor, started 140596878497536)>']
[2025-10-13 12:54:48] 2025-10-13 11:25:04,863 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:54:48] 2025-10-13 11:25:04,864 | INFO     | [monitor] control thread has ended
[2025-10-13 12:54:48] 2025-10-13 11:25:09,431 | INFO     | all workflow threads have been joined
[2025-10-13 12:54:48] 2025-10-13 11:25:09,431 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:54:48] 2025-10-13 11:25:09,432 | INFO     | traces error code: 0
[2025-10-13 12:54:48] 2025-10-13 11:25:09,432 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:54:48] 2025-10-13 11:25:11,039 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:54:48] 2025-10-13 11:25:11,076 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:54:48] 2025-10-13 11:25:11,131 [wrapper] pilotpid: 951548
[2025-10-13 12:54:48] 2025-10-13 11:25:11,183 [wrapper] Pilot exit status: 0
[2025-10-13 12:54:48] 2025-10-13 11:25:11,540 [wrapper] pandaids: 6840969190
[2025-10-13 12:54:48] 2025-10-13 11:25:12,733 [wrapper] cleanup supervisor_pilot 1710182 951549
[2025-10-13 12:54:48] 2025-10-13 11:25:12,754 [wrapper] Test setup, not cleaning
[2025-10-13 12:54:48] 2025-10-13 11:25:12,813 [wrapper] apfmon messages muted
[2025-10-13 12:54:48] 2025-10-13 11:25:12,853 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:54:48] 2025-10-13 11:25:12,968 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:54:48]  *** Error codes and diagnostics ***
[2025-10-13 12:54:48]     "exeErrorCode": 0,
[2025-10-13 12:54:48]     "exeErrorDiag": "",
[2025-10-13 12:54:48]     "pilotErrorCode": 0,
[2025-10-13 12:54:48]     "pilotErrorDiag": "",
[2025-10-13 12:54:48]  *** Listing of results directory ***
[2025-10-13 12:54:48] total 418684
[2025-10-13 12:54:48] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 19:11 pilot3.tar.gz
[2025-10-13 12:54:48] -rwx------. 1 boincer umatlas     36292 Oct 12 19:26 runpilot2-wrapper.sh
[2025-10-13 12:54:48] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:26 queuedata.json
[2025-10-13 12:54:48] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:54:48] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:09 run_atlas
[2025-10-13 12:54:48] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:09 job.xml
[2025-10-13 12:54:48] -rw-r--r--. 2 boincer umatlas 221411305 Oct 13 00:09 EVNT.46676267._004656.pool.root.1
[2025-10-13 12:54:48] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:09 start_atlas.sh
[2025-10-13 12:54:48] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:09 shared
[2025-10-13 12:54:48] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 00:09 input.tar.gz
[2025-10-13 12:54:48] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:09 boinc_lockfile
[2025-10-13 12:54:48] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:09 pandaJob.out
[2025-10-13 12:54:48] -rw-------. 1 boincer umatlas    974373 Oct 13 00:11 agis_schedconf.cvmfs.json
[2025-10-13 12:54:48] drwx------. 5 boincer umatlas      4096 Oct 13 00:11 pilot3
[2025-10-13 12:54:48] -rw-------. 1 boincer umatlas 196250949 Oct 13 07:21 HITS.46676269._092191.pool.root.1
[2025-10-13 12:54:48] -rw-r--r--. 1 boincer umatlas       530 Oct 13 07:22 boinc_task_state.xml
[2025-10-13 12:54:48] -rw-------. 1 boincer umatlas      1043 Oct 13 07:23 memory_monitor_summary.json
[2025-10-13 12:54:48] -rw-------. 1 boincer umatlas   1560580 Oct 13 07:23 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:54:48] -rw-------. 1 boincer umatlas    637081 Oct 13 07:23 log.46676269._092191.job.log.tgz.1
[2025-10-13 12:54:48] -rw-------. 1 boincer umatlas        95 Oct 13 07:23 pilot_heartbeat.json
[2025-10-13 12:54:48] -rw-------. 1 boincer umatlas      7826 Oct 13 07:24 heartbeat.json
[2025-10-13 12:54:48] -rw-------. 1 boincer umatlas      5009 Oct 13 07:25 pilotlog.txt
[2025-10-13 12:54:48] -rw-------. 1 boincer umatlas   2950354 Oct 13 07:25 log.46676269._092191.job.log.1
[2025-10-13 12:54:48] -rw-------. 1 boincer umatlas       357 Oct 13 07:25 output.list
[2025-10-13 12:54:48] -rw-r--r--. 1 boincer umatlas       620 Oct 13 07:25 runtime_log
[2025-10-13 12:54:48] -rw-------. 1 boincer umatlas   3604480 Oct 13 07:25 result.tar.gz
[2025-10-13 12:54:48] -rw-r--r--. 1 boincer umatlas      8701 Oct 13 07:25 runtime_log.err
[2025-10-13 12:54:48] -rw-------. 1 boincer umatlas       657 Oct 13 07:25 HkaNDmhdKS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm92lNDmYK93sm.diag
[2025-10-13 12:54:48] -rw-r--r--. 1 boincer umatlas      6612 Oct 13 12:50 init_data.xml
[2025-10-13 12:54:48] -rw-r--r--. 1 boincer umatlas        27 Oct 13 12:54 wrapper_checkpoint.txt
[2025-10-13 12:54:48] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 12:54 boinc_mmap_file
[2025-10-13 12:54:48] -rw-r--r--. 1 boincer umatlas     21218 Oct 13 12:54 stderr.txt
[2025-10-13 12:54:48] HITS file was successfully produced:
[2025-10-13 12:54:48] -rw-------. 1 boincer umatlas 196250949 Oct 13 07:21 shared/HITS.pool.root.1
[2025-10-13 12:54:48]  *** Contents of shared directory: ***
[2025-10-13 12:54:48] total 411976
[2025-10-13 12:54:48] -rw-r--r--. 2 boincer umatlas 221411305 Oct 13 00:09 ATLAS.root_0
[2025-10-13 12:54:48] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:09 start_atlas.sh
[2025-10-13 12:54:48] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 00:09 input.tar.gz
[2025-10-13 12:54:48] -rw-------. 1 boincer umatlas 196250949 Oct 13 07:21 HITS.pool.root.1
[2025-10-13 12:54:48] -rw-------. 1 boincer umatlas   3604480 Oct 13 07:25 result.tar.gz
12:54:50 (938811): run_atlas exited; CPU time 64529.357495
12:54:50 (938811): called boinc_finish(0)

</stderr_txt>
]]>

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