Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
10:36:56 (2913966): wrapper (7.7.26015): starting
10:36:56 (2913966): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 10:36:56] Arguments: --nthreads 4
[2025-10-13 10:36:56] Threads: 4
[2025-10-13 10:36:56] Checking for CVMFS
[2025-10-13 10:36:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 10:36:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 10:36:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 10:36:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 10:36:56] 2.13.2.0 428253 5564 51428 151654 1 57 2291589 4096001 1844 130560 0 18090538 99.997 317048 2345 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 10:36:56] CVMFS is ok
[2025-10-13 10:36:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 10:36:56] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 10:36:56] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 10:36:56] Further information can be found at the LHC@home message board.
[2025-10-13 10:36:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 10:36:56] Checking for apptainer binary...
[2025-10-13 10:36:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 10:36:56] Running /usr/bin/apptainer --version
[2025-10-13 10:36:56] apptainer version 1.4.2
[2025-10-13 10:36:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 10:36:56] Ryzen-9-7950X3D-Zen4-Ubu24
[2025-10-13 10:36:56] apptainer works
[2025-10-13 10:36:56] Set ATHENA_PROC_NUMBER=4
[2025-10-13 10:36:56] Set ATHENA_CORE_NUMBER=4
[2025-10-13 10:36:56] Starting ATLAS job with PandaID=6840969165
[2025-10-13 10:36:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 11:59:12]  *** The last 200 lines of the pilot log: ***
[2025-10-13 11:59:12] 2025-10-13 09:55:32,746 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 11:59:12] 2025-10-13 09:55:32,746 | INFO     | summary of transferred files:
[2025-10-13 11:59:12] 2025-10-13 09:55:32,746 | INFO     |  -- lfn=log.46676269._092166.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 11:59:12] 2025-10-13 09:55:32,746 | INFO     | stage-out finished correctly
[2025-10-13 11:59:12] 2025-10-13 09:55:34,114 | WARNING  | process 2926545 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 11:59:12] 2025-10-13 09:55:34,114 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6840969165/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 11:59:12] 2025-10-13 09:55:34,184 | INFO     | number of running child processes to parent process 2926545: 1
[2025-10-13 11:59:12] 2025-10-13 09:55:34,184 | INFO     | maximum number of monitored processes: 6
[2025-10-13 11:59:12] 2025-10-13 09:55:34,197 | INFO     | time since job start (4710s) is within the limit (172800.0s)
[2025-10-13 11:59:12] 2025-10-13 09:55:36,010 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 11:59:12] 2025-10-13 09:55:36,205 | INFO     | time since job start (4712s) is within the limit (172800.0s)
[2025-10-13 11:59:12] 2025-10-13 09:55:36,205 | INFO     | 4713s have passed since pilot start - server update state is 'RUNNING'
[2025-10-13 11:59:12] 2025-10-13 09:55:36,686 | INFO     | monitor loop #361: job 0:6840969165 is in state 'finished'
[2025-10-13 11:59:12] 2025-10-13 09:55:36,686 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:59:12] 2025-10-13 09:55:36,814 | INFO     | job 6840969165 has state=finished
[2025-10-13 11:59:12] 2025-10-13 09:55:36,815 | INFO     | preparing for final server update for job 6840969165 in state='finished'
[2025-10-13 11:59:12] 2025-10-13 09:55:36,815 | INFO     | this job has now completed (state=finished)
[2025-10-13 11:59:12] 2025-10-13 09:55:36,815 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 11:59:12] 2025-10-13 09:55:36,815 | INFO     | log transfer has been attempted: DONE
[2025-10-13 11:59:12] 2025-10-13 09:55:36,815 | INFO     | job 6840969165 has finished - writing final server update
[2025-10-13 11:59:12] 2025-10-13 09:55:36,815 | INFO     | total number of processed events: 400 (read)
[2025-10-13 11:59:12] 2025-10-13 09:55:36,833 | INFO     | executing command: lscpu
[2025-10-13 11:59:12] 2025-10-13 09:55:36,868 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 11:59:12] 2025-10-13 09:55:38,211 | INFO     | time since job start (4714s) is within the limit (172800.0s)
[2025-10-13 11:59:12] 2025-10-13 09:55:39,188 | INFO     | monitor loop #362: job 0:6840969165 is in state 'finished'
[2025-10-13 11:59:12] 2025-10-13 09:55:39,188 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:59:12] 2025-10-13 09:55:40,216 | INFO     | time since job start (4716s) is within the limit (172800.0s)
[2025-10-13 11:59:12] 2025-10-13 09:55:41,314 | INFO     | PID=2917810 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 11:59:12] 2025-10-13 09:55:41,314 | INFO     | .. there are 4 such processes running
[2025-10-13 11:59:12] 2025-10-13 09:55:41,691 | INFO     | monitor loop #363: job 0:6840969165 is in state 'finished'
[2025-10-13 11:59:12] 2025-10-13 09:55:41,691 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:59:12] 2025-10-13 09:55:42,314 | INFO     | time since job start (4718s) is within the limit (172800.0s)
[2025-10-13 11:59:12] 2025-10-13 09:55:44,193 | INFO     | monitor loop #364: job 0:6840969165 is in state 'finished'
[2025-10-13 11:59:12] 2025-10-13 09:55:44,193 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 11:59:12] 2025-10-13 09:55:44,323 | INFO     | time since job start (4720s) is within the limit (172800.0s)
[2025-10-13 11:59:12] 2025-10-13 09:55:46,283 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 11:59:12] 2025-10-13 09:55:46,285 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4179.780687500001
[2025-10-13 11:59:12] 2025-10-13 09:55:46,288 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6840969165/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 11:59:12] 2025-10-13 09:55:46,288 | INFO     | extracted standard info from prmon json
[2025-10-13 11:59:12] 2025-10-13 09:55:46,288 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 11:59:12] 2025-10-13 09:55:46,288 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 11:59:12] 2025-10-13 09:55:46,288 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 11:59:12] 2025-10-13 09:55:46,288 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 11:59:12] 2025-10-13 09:55:46,289 | INFO     | fitting pss+swap vs Time
[2025-10-13 11:59:12] 2025-10-13 09:55:46,289 | INFO     | sum of square deviations: 106336877.5
[2025-10-13 11:59:12] 2025-10-13 09:55:46,289 | INFO     | sum of deviations: -6587023725.5
[2025-10-13 11:59:12] 2025-10-13 09:55:46,289 | INFO     | mean x: 1760347054.5
[2025-10-13 11:59:12] 2025-10-13 09:55:46,289 | INFO     | mean y: 2398330.242857143
[2025-10-13 11:59:12] 2025-10-13 09:55:46,289 | INFO     | -- intersect: 109046862355.48698
[2025-10-13 11:59:12] 2025-10-13 09:55:46,290 | INFO     | intersect: 109046862355.48698
[2025-10-13 11:59:12] 2025-10-13 09:55:46,290 | INFO     | chi2: 0.018877304716720857
[2025-10-13 11:59:12] 2025-10-13 09:55:46,290 | INFO     | -- intersect: 109046862355.48698
[2025-10-13 11:59:12] 2025-10-13 09:55:46,290 | INFO     | current memory leak: -61.94 B/s (using 70 data points, chi2=0.02)
[2025-10-13 11:59:12] 2025-10-13 09:55:46,290 | INFO     | could have reported an average CPU frequency of 4539 MHz (6 samples)
[2025-10-13 11:59:12] 2025-10-13 09:55:46,290 | INFO     | ..............................
[2025-10-13 11:59:12] 2025-10-13 09:55:46,290 | INFO     | . Timing measurements:
[2025-10-13 11:59:12] 2025-10-13 09:55:46,290 | INFO     | . get job = 0 s
[2025-10-13 11:59:12] 2025-10-13 09:55:46,290 | INFO     | . initial setup = 1 s
[2025-10-13 11:59:12] 2025-10-13 09:55:46,290 | INFO     | . payload setup = 4 s
[2025-10-13 11:59:12] 2025-10-13 09:55:46,290 | INFO     | . stage-in = 0 s
[2025-10-13 11:59:12] 2025-10-13 09:55:46,290 | INFO     | . payload execution = 4685 s
[2025-10-13 11:59:12] 2025-10-13 09:55:46,290 | INFO     | . stage-out = 0 s
[2025-10-13 11:59:12] 2025-10-13 09:55:46,290 | INFO     | . log creation = 0 s
[2025-10-13 11:59:12] 2025-10-13 09:55:46,290 | INFO     | ..............................
[2025-10-13 11:59:12] 2025-10-13 09:55:46,333 | INFO     | time since job start (4722s) is within the limit (172800.0s)
[2025-10-13 11:59:12] 2025-10-13 09:55:46,343 | INFO     | 
[2025-10-13 11:59:12] 2025-10-13 09:55:46,343 | INFO     | job summary report
[2025-10-13 11:59:12] 2025-10-13 09:55:46,343 | INFO     | --------------------------------------------------
[2025-10-13 11:59:12] 2025-10-13 09:55:46,343 | INFO     | PanDA job id: 6840969165
[2025-10-13 11:59:12] 2025-10-13 09:55:46,343 | INFO     | task id: 46676269
[2025-10-13 11:59:12] 2025-10-13 09:55:46,343 | INFO     | errors: (none)
[2025-10-13 11:59:12] 2025-10-13 09:55:46,343 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 11:59:12] 2025-10-13 09:55:46,343 | INFO     | pilot state: finished 
[2025-10-13 11:59:12] 2025-10-13 09:55:46,343 | INFO     | transexitcode: 0
[2025-10-13 11:59:12] 2025-10-13 09:55:46,343 | INFO     | exeerrorcode: 0
[2025-10-13 11:59:12] 2025-10-13 09:55:46,344 | INFO     | exeerrordiag: 
[2025-10-13 11:59:12] 2025-10-13 09:55:46,344 | INFO     | exitcode: 0
[2025-10-13 11:59:12] 2025-10-13 09:55:46,344 | INFO     | exitmsg: OK
[2025-10-13 11:59:12] 2025-10-13 09:55:46,344 | INFO     | cpuconsumptiontime: 18047 s
[2025-10-13 11:59:12] 2025-10-13 09:55:46,344 | INFO     | nevents: 400
[2025-10-13 11:59:12] 2025-10-13 09:55:46,344 | INFO     | neventsw: 0
[2025-10-13 11:59:12] 2025-10-13 09:55:46,344 | INFO     | pid: 2926545
[2025-10-13 11:59:12] 2025-10-13 09:55:46,344 | INFO     | pgrp: 2926545
[2025-10-13 11:59:12] 2025-10-13 09:55:46,344 | INFO     | corecount: 4
[2025-10-13 11:59:12] 2025-10-13 09:55:46,344 | INFO     | event service: False
[2025-10-13 11:59:12] 2025-10-13 09:55:46,344 | INFO     | sizes: {0: 2348864, 3: 2349126, 11: 2349154, 4693: 2375505, 4694: 2375504, 4696: 2384572, 4699: 2384756, 4709: 2384950}
[2025-10-13 11:59:12] 2025-10-13 09:55:46,344 | INFO     | --------------------------------------------------
[2025-10-13 11:59:12] 2025-10-13 09:55:46,344 | INFO     | 
[2025-10-13 11:59:12] 2025-10-13 09:55:46,344 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2025-10-13 11:59:12] 2025-10-13 09:55:46,389 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 11:59:12] 2025-10-13 09:55:46,389 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 11:59:12] 2025-10-13 09:55:46,389 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 11:59:12] 2025-10-13 09:55:46,389 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 11:59:12] 2025-10-13 09:55:46,389 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 11:59:12] 2025-10-13 09:55:46,389 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 11:59:12] 2025-10-13 09:55:46,389 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 11:59:12] 2025-10-13 09:55:46,389 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 11:59:12] 2025-10-13 09:55:46,389 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 11:59:12] 2025-10-13 09:55:46,389 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 11:59:12] 2025-10-13 09:55:46,389 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 11:59:12] 2025-10-13 09:55:46,389 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 11:59:12] 2025-10-13 09:55:46,390 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 11:59:12] 2025-10-13 09:55:46,390 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 11:59:12] 2025-10-13 09:55:46,390 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 11:59:12] 2025-10-13 09:55:46,390 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 11:59:12] 2025-10-13 09:55:46,390 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 11:59:12] 2025-10-13 09:55:46,390 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 11:59:12] 2025-10-13 09:55:46,390 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 11:59:12] 2025-10-13 09:55:46,390 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 11:59:12] 2025-10-13 09:55:46,390 | INFO     | job 6840969165 has completed (purged errors)
[2025-10-13 11:59:12] 2025-10-13 09:55:46,390 | INFO     | overall cleanup function is called
[2025-10-13 11:59:12] 2025-10-13 09:55:47,396 | INFO     | --- collectZombieJob: --- 10, [2926545]
[2025-10-13 11:59:12] 2025-10-13 09:55:47,396 | INFO     | zombie collector waiting for pid 2926545
[2025-10-13 11:59:12] 2025-10-13 09:55:47,396 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 11:59:12] 2025-10-13 09:55:47,397 | INFO     | collected zombie processes
[2025-10-13 11:59:12] 2025-10-13 09:55:47,397 | INFO     | will attempt to kill all subprocesses of pid=2926545
[2025-10-13 11:59:12] 2025-10-13 09:55:47,473 | INFO     | process IDs to be killed: [2926545] (in reverse order)
[2025-10-13 11:59:12] 2025-10-13 09:55:47,552 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 11:59:12] 2025-10-13 09:55:47,553 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 11:59:12] 2025-10-13 09:55:47,555 | INFO     | did not find any defunct processes belonging to 2926545
[2025-10-13 11:59:12] 2025-10-13 09:55:47,557 | INFO     | did not find any defunct processes belonging to 2926545
[2025-10-13 11:59:12] 2025-10-13 09:55:47,557 | INFO     | ready for new job
[2025-10-13 11:59:12] 2025-10-13 09:55:47,557 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 11:59:12] 2025-10-13 09:55:47,558 | INFO     | ***************************************
[2025-10-13 11:59:12] 2025-10-13 09:55:47,558 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 11:59:12] 2025-10-13 09:55:47,558 | INFO     | ***************************************
[2025-10-13 11:59:12] 2025-10-13 09:55:47,559 | INFO     | 
[2025-10-13 11:59:12] 2025-10-13 09:55:47,559 | INFO     | architecture information:
[2025-10-13 11:59:12] 2025-10-13 09:55:47,566 | INFO     | executing command: cat /etc/os-release
[2025-10-13 11:59:12] 2025-10-13 09:55:47,586 | INFO     | cat /etc/os-release:
[2025-10-13 11:59:12] NAME="CentOS Linux"
[2025-10-13 11:59:12] VERSION="7 (Core)"
[2025-10-13 11:59:12] ID="centos"
[2025-10-13 11:59:12] ID_LIKE="rhel fedora"
[2025-10-13 11:59:12] VERSION_ID="7"
[2025-10-13 11:59:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 11:59:12] ANSI_COLOR="0;31"
[2025-10-13 11:59:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 11:59:12] HOME_URL="https://www.centos.org/"
[2025-10-13 11:59:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 11:59:12] 
[2025-10-13 11:59:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 11:59:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 11:59:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 11:59:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 11:59:12] 
[2025-10-13 11:59:12] 2025-10-13 09:55:47,586 | INFO     | ***************************************
[2025-10-13 11:59:12] 2025-10-13 09:55:48,088 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2025-10-13 11:59:12] 2025-10-13 09:55:48,132 | INFO     | sufficient remaining disk space (1765960318976 B)
[2025-10-13 11:59:12] 2025-10-13 09:55:48,132 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 11:59:12] 2025-10-13 09:55:48,133 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 11:59:12] 2025-10-13 09:55:48,133 | INFO     | update_server=False
[2025-10-13 11:59:12] 2025-10-13 09:55:48,133 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 11:59:12] 2025-10-13 09:55:48,133 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 11:59:12] 2025-10-13 09:55:48,133 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 11:59:12] 2025-10-13 09:55:48,133 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 11:59:12] 2025-10-13 09:55:48,133 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 11:59:12] 2025-10-13 09:55:48,133 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:59:12] 2025-10-13 09:55:48,133 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 11:59:12] 2025-10-13 09:55:48,133 | INFO     | aborting loop
[2025-10-13 11:59:12] 2025-10-13 09:55:48,298 | INFO     | all job control threads have been joined
[2025-10-13 11:59:12] 2025-10-13 09:55:48,303 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 11:59:12] 2025-10-13 09:55:48,699 | INFO     | all data control threads have been joined
[2025-10-13 11:59:12] 2025-10-13 09:55:48,816 | INFO     | all payload control threads have been joined
[2025-10-13 11:59:12] 2025-10-13 09:55:49,138 | INFO     | [job] queue monitor thread has finished
[2025-10-13 11:59:12] 2025-10-13 09:55:49,139 | INFO     | [job] job monitor thread has finished
[2025-10-13 11:59:12] 2025-10-13 09:55:49,140 | INFO     | [job] retrieve thread has finished
[2025-10-13 11:59:12] 2025-10-13 09:55:49,303 | INFO     | [job] control thread has finished
[2025-10-13 11:59:12] 2025-10-13 09:55:49,416 | INFO     | [payload] failed_post thread has finished
[2025-10-13 11:59:12] 2025-10-13 09:55:49,558 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 11:59:12] 2025-10-13 09:55:49,704 | INFO     | [data] control thread has finished
[2025-10-13 11:59:12] 2025-10-13 09:55:49,801 | INFO     | [payload] validate_post thread has finished
[2025-10-13 11:59:12] 2025-10-13 09:55:49,821 | INFO     | [payload] control thread has finished
[2025-10-13 11:59:12] 2025-10-13 09:55:49,861 | INFO     | [data] copytool_in thread has finished
[2025-10-13 11:59:12] 2025-10-13 09:55:49,917 | INFO     | [job] validate thread has finished
[2025-10-13 11:59:12] 2025-10-13 09:55:50,110 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 11:59:12] 2025-10-13 09:55:50,143 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 11:59:12] 2025-10-13 09:55:50,308 | INFO     | [data] copytool_out thread has finished
[2025-10-13 11:59:12] 2025-10-13 09:55:51,056 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 11:59:12] 2025-10-13 09:55:55,061 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 11:59:12] 2025-10-13 09:55:58,682 | INFO     | job.realtimelogging is not enabled
[2025-10-13 11:59:12] 2025-10-13 09:55:59,687 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 11:59:12] 2025-10-13 09:56:11,407 | INFO     | [monitor] cgroup control has ended
[2025-10-13 11:59:12] 2025-10-13 09:56:12,439 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137383765174080)>', '<ExcThread(monitor, started 137383420868352)>']
[2025-10-13 11:59:12] 2025-10-13 09:56:13,258 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 11:59:12] 2025-10-13 09:56:13,258 | INFO     | [monitor] control thread has ended
[2025-10-13 11:59:12] 2025-10-13 09:56:17,464 | INFO     | all workflow threads have been joined
[2025-10-13 11:59:12] 2025-10-13 09:56:17,464 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 11:59:12] 2025-10-13 09:56:17,465 | INFO     | traces error code: 0
[2025-10-13 11:59:12] 2025-10-13 09:56:17,465 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 11:59:12] 2025-10-13 09:56:17,560 [wrapper] ==== pilot stdout END ====
[2025-10-13 11:59:12] 2025-10-13 09:56:17,572 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 11:59:12] 2025-10-13 09:56:17,577 [wrapper] pilotpid: 2917810
[2025-10-13 11:59:12] 2025-10-13 09:56:17,580 [wrapper] Pilot exit status: 0
[2025-10-13 11:59:12] 2025-10-13 09:56:17,634 [wrapper] pandaids: 6840969165
[2025-10-13 11:59:12] 2025-10-13 09:56:17,672 [wrapper] cleanup supervisor_pilot 3005843 2917811
[2025-10-13 11:59:12] 2025-10-13 09:56:17,676 [wrapper] Test setup, not cleaning
[2025-10-13 11:59:12] 2025-10-13 09:56:17,680 [wrapper] apfmon messages muted
[2025-10-13 11:59:12] 2025-10-13 09:56:17,685 [wrapper] ==== wrapper stdout END ====
[2025-10-13 11:59:12] 2025-10-13 09:56:17,702 [wrapper] ==== wrapper stderr END ====
[2025-10-13 11:59:12]  *** Error codes and diagnostics ***
[2025-10-13 11:59:12]     "exeErrorCode": 0,
[2025-10-13 11:59:12]     "exeErrorDiag": "",
[2025-10-13 11:59:12]     "pilotErrorCode": 0,
[2025-10-13 11:59:12]     "pilotErrorDiag": "",
[2025-10-13 11:59:12]  *** Listing of results directory ***
[2025-10-13 11:59:12] total 403968
[2025-10-13 11:59:12] -rw-r--r-- 1 boinc boinc    557409 Oct 13 01:11 pilot3.tar.gz
[2025-10-13 11:59:12] -rw-r--r-- 1 boinc boinc      5112 Oct 13 01:23 queuedata.json
[2025-10-13 11:59:12] -rwx------ 1 boinc boinc     36292 Oct 13 01:24 runpilot2-wrapper.sh
[2025-10-13 11:59:12] -rw-r--r-- 1 boinc boinc       100 Oct 13 10:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 11:59:12] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 10:36 run_atlas
[2025-10-13 11:59:12] -rw-r--r-- 1 boinc boinc       105 Oct 13 10:36 job.xml
[2025-10-13 11:59:12] -rw-r--r-- 2 boinc boinc 219202342 Oct 13 10:36 EVNT.46676267._004655.pool.root.1
[2025-10-13 11:59:12] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:36 start_atlas.sh
[2025-10-13 11:59:12] drwxrwx--x 2 boinc boinc      4096 Oct 13 10:36 shared
[2025-10-13 11:59:12] -rw-r--r-- 2 boinc boinc    569683 Oct 13 10:36 input.tar.gz
[2025-10-13 11:59:12] -rw-r--r-- 1 boinc boinc         0 Oct 13 10:36 boinc_lockfile
[2025-10-13 11:59:12] -rw-r--r-- 1 boinc boinc      2550 Oct 13 10:36 pandaJob.out
[2025-10-13 11:59:12] -rw------- 1 boinc boinc    972857 Oct 13 10:37 agis_schedconf.cvmfs.json
[2025-10-13 11:59:12] -rw------- 1 boinc boinc   1560580 Oct 13 10:37 agis_ddmendpoints.agis.ALL.json
[2025-10-13 11:59:12] drwx------ 5 boinc boinc      4096 Oct 13 10:37 pilot3
[2025-10-13 11:59:12] -rw-r--r-- 1 boinc boinc      9560 Oct 13 11:52 init_data.xml
[2025-10-13 11:59:12] -rw------- 1 boinc boinc 188559490 Oct 13 11:55 HITS.46676269._092166.pool.root.1
[2025-10-13 11:59:12] -rw-r--r-- 1 boinc boinc       529 Oct 13 11:55 boinc_task_state.xml
[2025-10-13 11:59:12] -rw------- 1 boinc boinc      1039 Oct 13 11:55 memory_monitor_summary.json
[2025-10-13 11:59:12] -rw------- 1 boinc boinc    281011 Oct 13 11:55 log.46676269._092166.job.log.tgz.1
[2025-10-13 11:59:12] -rw------- 1 boinc boinc        95 Oct 13 11:55 pilot_heartbeat.json
[2025-10-13 11:59:12] -rw------- 1 boinc boinc      7786 Oct 13 11:55 heartbeat.json
[2025-10-13 11:59:12] -rw------- 1 boinc boinc      4633 Oct 13 11:56 pilotlog.txt
[2025-10-13 11:59:12] -rw------- 1 boinc boinc    715996 Oct 13 11:56 log.46676269._092166.job.log.1
[2025-10-13 11:59:12] -rw------- 1 boinc boinc       357 Oct 13 11:56 output.list
[2025-10-13 11:59:12] -rw-r--r-- 1 boinc boinc       620 Oct 13 11:56 runtime_log
[2025-10-13 11:59:12] -rw------- 1 boinc boinc   1013760 Oct 13 11:56 result.tar.gz
[2025-10-13 11:59:12] -rw------- 1 boinc boinc       657 Oct 13 11:56 yEuMDm0bKS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmu2lNDm3xIsXn.diag
[2025-10-13 11:59:12] -rw-r--r-- 1 boinc boinc      8841 Oct 13 11:56 runtime_log.err
[2025-10-13 11:59:12] -rw-r--r-- 1 boinc boinc      8192 Oct 13 11:59 boinc_mmap_file
[2025-10-13 11:59:12] -rw-r--r-- 1 boinc boinc        27 Oct 13 11:59 wrapper_checkpoint.txt
[2025-10-13 11:59:12] -rw-r--r-- 1 boinc boinc     22303 Oct 13 11:59 stderr.txt
[2025-10-13 11:59:12] HITS file was successfully produced:
[2025-10-13 11:59:12] -rw------- 1 boinc boinc 188559490 Oct 13 11:55 shared/HITS.pool.root.1
[2025-10-13 11:59:12]  *** Contents of shared directory: ***
[2025-10-13 11:59:12] total 399788
[2025-10-13 11:59:12] -rw-r--r-- 2 boinc boinc 219202342 Oct 13 10:36 ATLAS.root_0
[2025-10-13 11:59:12] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:36 start_atlas.sh
[2025-10-13 11:59:12] -rw-r--r-- 2 boinc boinc    569683 Oct 13 10:36 input.tar.gz
[2025-10-13 11:59:12] -rw------- 1 boinc boinc 188559490 Oct 13 11:55 HITS.pool.root.1
[2025-10-13 11:59:12] -rw------- 1 boinc boinc   1013760 Oct 13 11:56 result.tar.gz
11:59:14 (2913966): run_atlas exited; CPU time 18062.837817
11:59:14 (2913966): called boinc_finish(0)

</stderr_txt>
]]>

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