Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:14 (2302086): wrapper (7.7.26015): starting
00:05:14 (2302086): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:05:14] Arguments: --nthreads 12
[2025-10-13 00:05:14] Threads: 12
[2025-10-13 00:05:14] Checking for CVMFS
[2025-10-13 00:05:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:05:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:05:15] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:05:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:05:16] 2.13.2.0 1602499 124745 164896 151647 1 609 24465150 40960000 27530 16776704 0 306838718 99.735 202968838 35267 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:05:16] CVMFS is ok
[2025-10-13 00:05:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:05:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:05:16] Further information can be found at the LHC@home message board.
[2025-10-13 00:05:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:05:16] Checking for apptainer binary...
[2025-10-13 00:05:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:05:16] Running /usr/bin/apptainer --version
[2025-10-13 00:05:16] apptainer version 1.4.3-1.el9
[2025-10-13 00:05:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:05:17] c-212-17.aglt2.org
[2025-10-13 00:05:17] apptainer works
[2025-10-13 00:05:17] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:05:17] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:05:17] Starting ATLAS job with PandaID=6841124689
[2025-10-13 00:05:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:50:37]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:50:37] 2025-10-13 08:49:27,279 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 04:50:37] 2025-10-13 08:49:27,301 | INFO     | fitting pss+swap vs Time
[2025-10-13 04:50:37] 2025-10-13 08:49:27,301 | INFO     | sum of square deviations: 6662261188.118697
[2025-10-13 04:50:37] 2025-10-13 08:49:27,303 | INFO     | sum of deviations: 187789685588.37418
[2025-10-13 04:50:37] 2025-10-13 08:49:27,303 | INFO     | mean x: 1760336863.8021584
[2025-10-13 04:50:37] 2025-10-13 08:49:27,304 | INFO     | mean y: 2547754.0431654677
[2025-10-13 04:50:37] 2025-10-13 08:49:27,304 | INFO     | -- intersect: -49616207327.57498
[2025-10-13 04:50:37] 2025-10-13 08:49:27,304 | INFO     | intersect: -49616207327.57498
[2025-10-13 04:50:37] 2025-10-13 08:49:27,304 | INFO     | chi2: 6.984909798510762
[2025-10-13 04:50:37] 2025-10-13 08:49:27,304 | INFO     | sum of square deviations: 6309230793.765594
[2025-10-13 04:50:37] 2025-10-13 08:49:27,306 | INFO     | sum of deviations: 223428279205.28955
[2025-10-13 04:50:37] 2025-10-13 08:49:27,306 | INFO     | mean x: 1760336711.3040292
[2025-10-13 04:50:37] 2025-10-13 08:49:27,306 | INFO     | mean y: 2562960.827838828
[2025-10-13 04:50:37] 2025-10-13 08:49:27,306 | INFO     | -- intersect: -62336098452.09787
[2025-10-13 04:50:37] 2025-10-13 08:49:27,306 | INFO     | intersect: -62336098452.09787
[2025-10-13 04:50:37] 2025-10-13 08:49:27,307 | INFO     | chi2: 5.396375340848935
[2025-10-13 04:50:37] 2025-10-13 08:49:27,307 | INFO     | current chi2=5.396375340848935 (change=22.74237611487146 %)
[2025-10-13 04:50:37] 2025-10-13 08:49:27,307 | INFO     | right removable region: 272
[2025-10-13 04:50:37] 2025-10-13 08:49:27,307 | INFO     | sum of square deviations: 6309196390.153847
[2025-10-13 04:50:37] 2025-10-13 08:49:27,309 | INFO     | sum of deviations: 99945770869.92302
[2025-10-13 04:50:37] 2025-10-13 08:49:27,309 | INFO     | mean x: 1760337016.3076923
[2025-10-13 04:50:37] 2025-10-13 08:49:27,309 | INFO     | mean y: 2585655.8937728936
[2025-10-13 04:50:37] 2025-10-13 08:49:27,309 | INFO     | -- intersect: -27883412687.778393
[2025-10-13 04:50:37] 2025-10-13 08:49:27,309 | INFO     | intersect: -27883412687.778393
[2025-10-13 04:50:37] 2025-10-13 08:49:27,310 | INFO     | chi2: 3.4989676391852416
[2025-10-13 04:50:37] 2025-10-13 08:49:27,310 | INFO     | current chi2=3.4989676391852416 (change=49.90675985635134 %)
[2025-10-13 04:50:37] 2025-10-13 08:49:27,310 | INFO     | sum of square deviations: 5968829504.671636
[2025-10-13 04:50:37] 2025-10-13 08:49:27,312 | INFO     | sum of deviations: 47798133561.91789
[2025-10-13 04:50:37] 2025-10-13 08:49:27,312 | INFO     | mean x: 1760337168.813433
[2025-10-13 04:50:37] 2025-10-13 08:49:27,312 | INFO     | mean y: 2608959.0783582088
[2025-10-13 04:50:37] 2025-10-13 08:49:27,312 | INFO     | -- intersect: -14094096440.715387
[2025-10-13 04:50:37] 2025-10-13 08:49:27,312 | INFO     | intersect: -14094096440.715387
[2025-10-13 04:50:37] 2025-10-13 08:49:27,312 | INFO     | chi2: 2.3039443202041414
[2025-10-13 04:50:37] 2025-10-13 08:49:27,312 | INFO     | current chi2=2.3039443202041414 (change=34.15359735248564 %)
[2025-10-13 04:50:37] 2025-10-13 08:49:27,313 | INFO     | sum of square deviations: 5640927969.171115
[2025-10-13 04:50:37] 2025-10-13 08:49:27,314 | INFO     | sum of deviations: 15550304132.01141
[2025-10-13 04:50:37] 2025-10-13 08:49:27,314 | INFO     | mean x: 1760337321.3193917
[2025-10-13 04:50:37] 2025-10-13 08:49:27,314 | INFO     | mean y: 2623941.8212927757
[2025-10-13 04:50:37] 2025-10-13 08:49:27,314 | INFO     | -- intersect: -4850084844.933375
[2025-10-13 04:50:37] 2025-10-13 08:49:27,314 | INFO     | intersect: -4850084844.933375
[2025-10-13 04:50:37] 2025-10-13 08:49:27,315 | INFO     | chi2: 1.8887792235753431
[2025-10-13 04:50:37] 2025-10-13 08:49:27,315 | INFO     | current chi2=1.8887792235753431 (change=18.019753905858824 %)
[2025-10-13 04:50:37] 2025-10-13 08:49:27,315 | INFO     | left removable region: 30
[2025-10-13 04:50:37] 2025-10-13 08:49:27,315 | INFO     | sum of square deviations: 4394708243.359512
[2025-10-13 04:50:37] 2025-10-13 08:49:27,316 | INFO     | sum of deviations: 19351134640.904957
[2025-10-13 04:50:37] 2025-10-13 08:49:27,317 | INFO     | mean x: 1760337595.822314
[2025-10-13 04:50:37] 2025-10-13 08:49:27,317 | INFO     | mean y: 2658149.276859504
[2025-10-13 04:50:37] 2025-10-13 08:49:27,317 | INFO     | -- intersect: -7748602672.571026
[2025-10-13 04:50:37] 2025-10-13 08:49:27,317 | INFO     | intersect: -7748602672.571026
[2025-10-13 04:50:37] 2025-10-13 08:49:27,317 | INFO     | chi2: 0.0022717856624749027
[2025-10-13 04:50:37] 2025-10-13 08:49:27,317 | INFO     | -- intersect: -7748602672.571026
[2025-10-13 04:50:37] 2025-10-13 08:49:27,317 | INFO     | current memory leak: 4.40 B/s (using 242 data points, chi2=0.00)
[2025-10-13 04:50:37] 2025-10-13 08:49:27,318 | INFO     | could have reported an average CPU frequency of 3122 MHz (13 samples)
[2025-10-13 04:50:37] 2025-10-13 08:49:27,318 | INFO     | ..............................
[2025-10-13 04:50:37] 2025-10-13 08:49:27,318 | INFO     | . Timing measurements:
[2025-10-13 04:50:37] 2025-10-13 08:49:27,318 | INFO     | . get job = 0 s
[2025-10-13 04:50:37] 2025-10-13 08:49:27,318 | INFO     | . initial setup = 4 s
[2025-10-13 04:50:37] 2025-10-13 08:49:27,318 | INFO     | . payload setup = 9 s
[2025-10-13 04:50:37] 2025-10-13 08:49:27,318 | INFO     | . stage-in = 0 s
[2025-10-13 04:50:37] 2025-10-13 08:49:27,318 | INFO     | . payload execution = 16936 s
[2025-10-13 04:50:37] 2025-10-13 08:49:27,318 | INFO     | . stage-out = 4 s
[2025-10-13 04:50:37] 2025-10-13 08:49:27,318 | INFO     | . log creation = 0 s
[2025-10-13 04:50:37] 2025-10-13 08:49:27,318 | INFO     | ..............................
[2025-10-13 04:50:37] 2025-10-13 08:49:27,487 | INFO     | 
[2025-10-13 04:50:37] 2025-10-13 08:49:27,488 | INFO     | job summary report
[2025-10-13 04:50:37] 2025-10-13 08:49:27,488 | INFO     | --------------------------------------------------
[2025-10-13 04:50:37] 2025-10-13 08:49:27,488 | INFO     | PanDA job id: 6841124689
[2025-10-13 04:50:37] 2025-10-13 08:49:27,488 | INFO     | task id: 46676269
[2025-10-13 04:50:37] 2025-10-13 08:49:27,488 | INFO     | errors: (none)
[2025-10-13 04:50:37] 2025-10-13 08:49:27,488 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 04:50:37] 2025-10-13 08:49:27,488 | INFO     | pilot state: finished 
[2025-10-13 04:50:37] 2025-10-13 08:49:27,488 | INFO     | transexitcode: 0
[2025-10-13 04:50:37] 2025-10-13 08:49:27,488 | INFO     | exeerrorcode: 0
[2025-10-13 04:50:37] 2025-10-13 08:49:27,488 | INFO     | exeerrordiag: 
[2025-10-13 04:50:37] 2025-10-13 08:49:27,488 | INFO     | exitcode: 0
[2025-10-13 04:50:37] 2025-10-13 08:49:27,488 | INFO     | exitmsg: OK
[2025-10-13 04:50:37] 2025-10-13 08:49:27,488 | INFO     | cpuconsumptiontime: 35856 s
[2025-10-13 04:50:37] 2025-10-13 08:49:27,489 | INFO     | nevents: 400
[2025-10-13 04:50:37] 2025-10-13 08:49:27,489 | INFO     | neventsw: 0
[2025-10-13 04:50:37] 2025-10-13 08:49:27,489 | INFO     | pid: 2330064
[2025-10-13 04:50:37] 2025-10-13 08:49:27,489 | INFO     | pgrp: 2330064
[2025-10-13 04:50:37] 2025-10-13 08:49:27,489 | INFO     | corecount: 12
[2025-10-13 04:50:37] 2025-10-13 08:49:27,489 | INFO     | event service: False
[2025-10-13 04:50:37] 2025-10-13 08:49:27,489 | INFO     | sizes: {0: 2348630, 1: 2348885, 12: 2348885, 14: 2349175, 23: 2349203, 16951: 2381333, 16956: 2390331, 16957: 2390387, 16973: 2390581}
[2025-10-13 04:50:37] 2025-10-13 08:49:27,489 | INFO     | --------------------------------------------------
[2025-10-13 04:50:37] 2025-10-13 08:49:27,489 | INFO     | 
[2025-10-13 04:50:37] 2025-10-13 08:49:27,489 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-13 04:50:37] 2025-10-13 08:49:27,546 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 04:50:37] 2025-10-13 08:49:27,546 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 04:50:37] 2025-10-13 08:49:27,546 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 04:50:37] 2025-10-13 08:49:27,546 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 04:50:37] 2025-10-13 08:49:27,546 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 04:50:37] 2025-10-13 08:49:27,546 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 04:50:37] 2025-10-13 08:49:27,546 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 04:50:37] 2025-10-13 08:49:27,546 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 04:50:37] 2025-10-13 08:49:27,547 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 04:50:37] 2025-10-13 08:49:27,547 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 04:50:37] 2025-10-13 08:49:27,547 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 04:50:37] 2025-10-13 08:49:27,547 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 04:50:37] 2025-10-13 08:49:27,547 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 04:50:37] 2025-10-13 08:49:27,547 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 04:50:37] 2025-10-13 08:49:27,547 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 04:50:37] 2025-10-13 08:49:27,547 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 04:50:37] 2025-10-13 08:49:27,547 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 04:50:37] 2025-10-13 08:49:27,547 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 04:50:37] 2025-10-13 08:49:27,547 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 04:50:37] 2025-10-13 08:49:27,547 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 04:50:37] 2025-10-13 08:49:27,548 | INFO     | job 6841124689 has completed (purged errors)
[2025-10-13 04:50:37] 2025-10-13 08:49:27,548 | INFO     | overall cleanup function is called
[2025-10-13 04:50:37] 2025-10-13 08:49:28,574 | INFO     | --- collectZombieJob: --- 10, [2330064]
[2025-10-13 04:50:37] 2025-10-13 08:49:28,575 | INFO     | zombie collector waiting for pid 2330064
[2025-10-13 04:50:37] 2025-10-13 08:49:28,575 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 04:50:37] 2025-10-13 08:49:28,575 | INFO     | collected zombie processes
[2025-10-13 04:50:37] 2025-10-13 08:49:28,575 | INFO     | will attempt to kill all subprocesses of pid=2330064
[2025-10-13 04:50:37] 2025-10-13 08:49:29,152 | INFO     | process IDs to be killed: [2330064] (in reverse order)
[2025-10-13 04:50:37] 2025-10-13 08:49:29,287 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:50:37] 2025-10-13 08:49:29,288 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:50:37] 2025-10-13 08:49:29,306 | INFO     | did not find any defunct processes belonging to 2330064
[2025-10-13 04:50:37] 2025-10-13 08:49:29,324 | INFO     | did not find any defunct processes belonging to 2330064
[2025-10-13 04:50:37] 2025-10-13 08:49:29,324 | INFO     | ready for new job
[2025-10-13 04:50:37] 2025-10-13 08:49:29,324 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:50:37] 2025-10-13 08:49:29,327 | INFO     | ***************************************
[2025-10-13 04:50:37] 2025-10-13 08:49:29,327 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:50:37] 2025-10-13 08:49:29,327 | INFO     | ***************************************
[2025-10-13 04:50:37] 2025-10-13 08:49:29,327 | INFO     | 
[2025-10-13 04:50:37] 2025-10-13 08:49:29,355 | INFO     | architecture information:
[2025-10-13 04:50:37] 2025-10-13 08:49:29,376 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:50:37] 2025-10-13 08:49:29,432 | INFO     | cat /etc/os-release:
[2025-10-13 04:50:37] NAME="CentOS Linux"
[2025-10-13 04:50:37] VERSION="7 (Core)"
[2025-10-13 04:50:37] ID="centos"
[2025-10-13 04:50:37] ID_LIKE="rhel fedora"
[2025-10-13 04:50:37] VERSION_ID="7"
[2025-10-13 04:50:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:50:37] ANSI_COLOR="0;31"
[2025-10-13 04:50:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:50:37] HOME_URL="https://www.centos.org/"
[2025-10-13 04:50:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:50:37] 
[2025-10-13 04:50:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:50:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:50:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:50:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:50:37] 
[2025-10-13 04:50:37] 2025-10-13 08:49:29,432 | INFO     | ***************************************
[2025-10-13 04:50:37] 2025-10-13 08:49:29,936 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-13 04:50:37] 2025-10-13 08:49:30,368 | INFO     | sufficient remaining disk space (127376818176 B)
[2025-10-13 04:50:37] 2025-10-13 08:49:30,368 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:50:37] 2025-10-13 08:49:30,369 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:50:37] 2025-10-13 08:49:30,369 | INFO     | update_server=False
[2025-10-13 04:50:37] 2025-10-13 08:49:30,369 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:50:37] 2025-10-13 08:49:30,422 | INFO     | all payload control threads have been joined
[2025-10-13 04:50:37] 2025-10-13 08:49:30,426 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 04:50:37] 2025-10-13 08:49:30,427 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 04:50:37] 2025-10-13 08:49:30,427 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:50:37] 2025-10-13 08:49:30,427 | INFO     | will abort loop
[2025-10-13 04:50:37] 2025-10-13 08:49:30,486 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:50:37] 2025-10-13 08:49:30,519 | INFO     | all data control threads have been joined
[2025-10-13 04:50:37] 2025-10-13 08:49:30,524 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:50:37] 2025-10-13 08:49:30,776 | INFO     | all job control threads have been joined
[2025-10-13 04:50:37] 2025-10-13 08:49:31,375 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:50:37] 2025-10-13 08:49:31,425 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:50:37] 2025-10-13 08:49:31,433 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:50:37] 2025-10-13 08:49:31,444 | INFO     | [payload] control thread has finished
[2025-10-13 04:50:37] 2025-10-13 08:49:31,507 | INFO     | [job] validate thread has finished
[2025-10-13 04:50:37] 2025-10-13 08:49:31,523 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:50:37] 2025-10-13 08:49:31,526 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:50:37] 2025-10-13 08:49:31,526 | INFO     | [data] control thread has finished
[2025-10-13 04:50:37] 2025-10-13 08:49:31,783 | INFO     | [job] control thread has finished
[2025-10-13 04:50:37] 2025-10-13 08:49:31,834 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:50:37] 2025-10-13 08:49:32,389 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:50:37] 2025-10-13 08:49:32,501 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:50:37] 2025-10-13 08:49:32,514 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:50:37] 2025-10-13 08:49:32,514 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:50:37] 2025-10-13 08:49:32,532 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:50:37] 2025-10-13 08:49:33,508 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:50:37] 2025-10-13 08:49:34,498 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:50:37] 2025-10-13 08:50:00,836 | INFO     | PID=2308276 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 04:50:37] 2025-10-13 08:50:00,837 | INFO     | .. there are 24 such processes running
[2025-10-13 04:50:37] 2025-10-13 08:50:00,837 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:50:37] 2025-10-13 08:50:00,837 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:50:37] 2025-10-13 08:50:00,838 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:50:37] 2025-10-13 08:50:30,428 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:50:37] 2025-10-13 08:50:32,004 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140104013190976)>', '<ExcThread(monitor, started 140103309588224)>']
[2025-10-13 04:50:37] 2025-10-13 08:50:32,032 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:50:37] 2025-10-13 08:50:32,033 | INFO     | [monitor] control thread has ended
[2025-10-13 04:50:37] 2025-10-13 08:50:37,029 | INFO     | all workflow threads have been joined
[2025-10-13 04:50:37] 2025-10-13 08:50:37,029 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:50:37] 2025-10-13 08:50:37,029 | INFO     | traces error code: 0
[2025-10-13 04:50:37] 2025-10-13 08:50:37,029 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:50:37] 2025-10-13 08:50:37,150 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:50:37] 2025-10-13 08:50:37,153 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:50:37] 2025-10-13 08:50:37,155 [wrapper] pilotpid: 2308276
[2025-10-13 04:50:37] 2025-10-13 08:50:37,157 [wrapper] Pilot exit status: 0
[2025-10-13 04:50:37] 2025-10-13 08:50:37,212 [wrapper] pandaids: 6841124689
[2025-10-13 04:50:37] 2025-10-13 08:50:37,323 [wrapper] cleanup supervisor_pilot 3098542 2308277
[2025-10-13 04:50:37] 2025-10-13 08:50:37,327 [wrapper] Test setup, not cleaning
[2025-10-13 04:50:37] 2025-10-13 08:50:37,330 [wrapper] apfmon messages muted
[2025-10-13 04:50:37] 2025-10-13 08:50:37,332 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:50:37] 2025-10-13 08:50:37,334 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:50:37]  *** Error codes and diagnostics ***
[2025-10-13 04:50:37]     "exeErrorCode": 0,
[2025-10-13 04:50:37]     "exeErrorDiag": "",
[2025-10-13 04:50:37]     "pilotErrorCode": 0,
[2025-10-13 04:50:37]     "pilotErrorDiag": "",
[2025-10-13 04:50:37]  *** Listing of results directory ***
[2025-10-13 04:50:37] total 410644
[2025-10-13 04:50:37] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 22:00 pilot3.tar.gz
[2025-10-13 04:50:37] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 22:05 queuedata.json
[2025-10-13 04:50:37] -rwx------. 1 boincer umatlas     36292 Oct 12 22:05 runpilot2-wrapper.sh
[2025-10-13 04:50:37] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:50:37] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:05 run_atlas
[2025-10-13 04:50:37] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:05 job.xml
[2025-10-13 04:50:37] -rw-r--r--. 2 boincer umatlas 219661171 Oct 13 00:05 EVNT.46676267._004377.pool.root.1
[2025-10-13 04:50:37] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:05 start_atlas.sh
[2025-10-13 04:50:37] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:05 shared
[2025-10-13 04:50:37] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 00:05 input.tar.gz
[2025-10-13 04:50:37] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:05 boinc_lockfile
[2025-10-13 04:50:37] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:05 pandaJob.out
[2025-10-13 04:50:37] -rw-------. 1 boincer umatlas    974373 Oct 13 00:05 agis_schedconf.cvmfs.json
[2025-10-13 04:50:37] drwx------. 5 boincer umatlas      4096 Oct 13 00:06 pilot3
[2025-10-13 04:50:37] -rw-------. 1 boincer umatlas 191402599 Oct 13 04:46 HITS.46676269._094556.pool.root.1
[2025-10-13 04:50:37] -rw-r--r--. 1 boincer umatlas       530 Oct 13 04:46 boinc_task_state.xml
[2025-10-13 04:50:37] -rw-r--r--. 1 boincer umatlas      6948 Oct 13 04:47 init_data.xml
[2025-10-13 04:50:37] -rw-------. 1 boincer umatlas      1049 Oct 13 04:49 memory_monitor_summary.json
[2025-10-13 04:50:37] -rw-------. 1 boincer umatlas   1560580 Oct 13 04:49 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:50:37] -rw-------. 1 boincer umatlas    570379 Oct 13 04:49 log.46676269._094556.job.log.tgz.1
[2025-10-13 04:50:37] -rw-------. 1 boincer umatlas      7808 Oct 13 04:49 heartbeat.json
[2025-10-13 04:50:37] -rw-------. 1 boincer umatlas        95 Oct 13 04:50 pilot_heartbeat.json
[2025-10-13 04:50:37] -rw-r--r--. 1 boincer umatlas        28 Oct 13 04:50 wrapper_checkpoint.txt
[2025-10-13 04:50:37] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 04:50 boinc_mmap_file
[2025-10-13 04:50:37] -rw-------. 1 boincer umatlas      5011 Oct 13 04:50 pilotlog.txt
[2025-10-13 04:50:37] -rw-------. 1 boincer umatlas   2192075 Oct 13 04:50 log.46676269._094556.job.log.1
[2025-10-13 04:50:37] -rw-------. 1 boincer umatlas       357 Oct 13 04:50 output.list
[2025-10-13 04:50:37] -rw-r--r--. 1 boincer umatlas       620 Oct 13 04:50 runtime_log
[2025-10-13 04:50:37] -rw-------. 1 boincer umatlas   2785280 Oct 13 04:50 result.tar.gz
[2025-10-13 04:50:37] -rw-r--r--. 1 boincer umatlas      8706 Oct 13 04:50 runtime_log.err
[2025-10-13 04:50:37] -rw-------. 1 boincer umatlas       660 Oct 13 04:50 bBXMDmi7MS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOSmNDmf77rvn.diag
[2025-10-13 04:50:37] -rw-r--r--. 1 boincer umatlas     21040 Oct 13 04:50 stderr.txt
[2025-10-13 04:50:37] HITS file was successfully produced:
[2025-10-13 04:50:37] -rw-------. 1 boincer umatlas 191402599 Oct 13 04:46 shared/HITS.pool.root.1
[2025-10-13 04:50:37]  *** Contents of shared directory: ***
[2025-10-13 04:50:37] total 404740
[2025-10-13 04:50:37] -rw-r--r--. 2 boincer umatlas 219661171 Oct 13 00:05 ATLAS.root_0
[2025-10-13 04:50:37] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:05 start_atlas.sh
[2025-10-13 04:50:37] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 00:05 input.tar.gz
[2025-10-13 04:50:37] -rw-------. 1 boincer umatlas 191402599 Oct 13 04:46 HITS.pool.root.1
[2025-10-13 04:50:37] -rw-------. 1 boincer umatlas   2785280 Oct 13 04:50 result.tar.gz
04:50:38 (2302086): run_atlas exited; CPU time 36323.902915
04:50:38 (2302086): called boinc_finish(0)

</stderr_txt>
]]>

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