Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:37 (2303915): wrapper (7.7.26015): starting
00:05:37 (2303915): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:05:37] Arguments: --nthreads 12
[2025-10-13 00:05:37] Threads: 12
[2025-10-13 00:05:37] Checking for CVMFS
[2025-10-13 00:05:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:05:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:05:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:05:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:05:38] 2.13.2.0 1602499 124746 164896 151647 1 609 24465150 40960000 27556 16776704 0 306843686 99.735 202968838 35267 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:05:38] CVMFS is ok
[2025-10-13 00:05:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:05:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:05:38] Further information can be found at the LHC@home message board.
[2025-10-13 00:05:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:05:38] Checking for apptainer binary...
[2025-10-13 00:05:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:05:38] Running /usr/bin/apptainer --version
[2025-10-13 00:05:38] apptainer version 1.4.3-1.el9
[2025-10-13 00:05:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:05:38] c-212-17.aglt2.org
[2025-10-13 00:05:38] apptainer works
[2025-10-13 00:05:38] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:05:38] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:05:39] Starting ATLAS job with PandaID=6841124687
[2025-10-13 00:05:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:59:53]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:59:53] 2025-10-13 09:59:01,926 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:59:53] 2025-10-13 09:59:01,994 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:59:53] 2025-10-13 09:59:01,996 | INFO     | sum of square deviations: 12955730650.466785
[2025-10-13 05:59:53] 2025-10-13 09:59:02,006 | INFO     | sum of deviations: 365826813547.41
[2025-10-13 05:59:53] 2025-10-13 09:59:02,006 | INFO     | mean x: 1760338967.224784
[2025-10-13 05:59:53] 2025-10-13 09:59:02,006 | INFO     | mean y: 2537783.78962536
[2025-10-13 05:59:53] 2025-10-13 09:59:02,006 | INFO     | -- intersect: -49703589374.69519
[2025-10-13 05:59:53] 2025-10-13 09:59:02,006 | INFO     | intersect: -49703589374.69519
[2025-10-13 05:59:53] 2025-10-13 09:59:02,007 | INFO     | chi2: 7.1419412144750885
[2025-10-13 05:59:53] 2025-10-13 09:59:02,007 | INFO     | sum of square deviations: 12403734787.710594
[2025-10-13 05:59:53] 2025-10-13 09:59:02,009 | INFO     | sum of deviations: 409123658107.0877
[2025-10-13 05:59:53] 2025-10-13 09:59:02,010 | INFO     | mean x: 1760338814.7280703
[2025-10-13 05:59:53] 2025-10-13 09:59:02,010 | INFO     | mean y: 2549624.0116959065
[2025-10-13 05:59:53] 2025-10-13 09:59:02,010 | INFO     | -- intersect: -58060305452.751236
[2025-10-13 05:59:53] 2025-10-13 09:59:02,010 | INFO     | intersect: -58060305452.751236
[2025-10-13 05:59:53] 2025-10-13 09:59:02,010 | INFO     | chi2: 5.509186078821226
[2025-10-13 05:59:53] 2025-10-13 09:59:02,010 | INFO     | current chi2=5.509186078821226 (change=22.861503429132686 %)
[2025-10-13 05:59:53] 2025-10-13 09:59:02,010 | INFO     | right removable region: 341
[2025-10-13 05:59:53] 2025-10-13 09:59:02,011 | INFO     | sum of square deviations: 12403687207.710594
[2025-10-13 05:59:53] 2025-10-13 09:59:02,013 | INFO     | sum of deviations: 257529968313.17554
[2025-10-13 05:59:53] 2025-10-13 09:59:02,013 | INFO     | mean x: 1760339119.7280703
[2025-10-13 05:59:53] 2025-10-13 09:59:02,014 | INFO     | mean y: 2567672.6900584796
[2025-10-13 05:59:53] 2025-10-13 09:59:02,014 | INFO     | -- intersect: -36546248024.80675
[2025-10-13 05:59:53] 2025-10-13 09:59:02,014 | INFO     | intersect: -36546248024.80675
[2025-10-13 05:59:53] 2025-10-13 09:59:02,014 | INFO     | chi2: 3.849261882573126
[2025-10-13 05:59:53] 2025-10-13 09:59:02,014 | INFO     | current chi2=3.849261882573126 (change=46.103422487270706 %)
[2025-10-13 05:59:53] 2025-10-13 09:59:02,015 | INFO     | sum of square deviations: 11867551039.946577
[2025-10-13 05:59:53] 2025-10-13 09:59:02,017 | INFO     | sum of deviations: 193719041642.75665
[2025-10-13 05:59:53] 2025-10-13 09:59:02,017 | INFO     | mean x: 1760339272.231454
[2025-10-13 05:59:53] 2025-10-13 09:59:02,018 | INFO     | mean y: 2585782.721068249
[2025-10-13 05:59:53] 2025-10-13 09:59:02,018 | INFO     | -- intersect: -28732174711.24518
[2025-10-13 05:59:53] 2025-10-13 09:59:02,018 | INFO     | intersect: -28732174711.24518
[2025-10-13 05:59:53] 2025-10-13 09:59:02,018 | INFO     | chi2: 2.782991627899407
[2025-10-13 05:59:53] 2025-10-13 09:59:02,018 | INFO     | current chi2=2.782991627899407 (change=27.70064202441187 %)
[2025-10-13 05:59:53] 2025-10-13 09:59:02,023 | INFO     | sum of square deviations: 11347089584.674706
[2025-10-13 05:59:53] 2025-10-13 09:59:02,025 | INFO     | sum of deviations: 154343657356.02414
[2025-10-13 05:59:53] 2025-10-13 09:59:02,025 | INFO     | mean x: 1760339424.7349398
[2025-10-13 05:59:53] 2025-10-13 09:59:02,025 | INFO     | mean y: 2597310.204819277
[2025-10-13 05:59:53] 2025-10-13 09:59:02,026 | INFO     | -- intersect: -23941624066.926323
[2025-10-13 05:59:53] 2025-10-13 09:59:02,026 | INFO     | intersect: -23941624066.926323
[2025-10-13 05:59:53] 2025-10-13 09:59:02,026 | INFO     | chi2: 2.464590258325563
[2025-10-13 05:59:53] 2025-10-13 09:59:02,026 | INFO     | current chi2=2.464590258325563 (change=11.440974754716471 %)
[2025-10-13 05:59:53] 2025-10-13 09:59:02,026 | INFO     | left removable region: 30
[2025-10-13 05:59:53] 2025-10-13 09:59:02,041 | INFO     | monitor loop #1312: job 0:6841124687 is in state 'finished'
[2025-10-13 05:59:53] 2025-10-13 09:59:02,041 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:59:53] 2025-10-13 09:59:02,042 | INFO     | sum of square deviations: 9327207866.39233
[2025-10-13 05:59:53] 2025-10-13 09:59:02,044 | INFO     | sum of deviations: 124886546786.68182
[2025-10-13 05:59:53] 2025-10-13 09:59:02,044 | INFO     | mean x: 1760339699.2379422
[2025-10-13 05:59:53] 2025-10-13 09:59:02,044 | INFO     | mean y: 2633947.31511254
[2025-10-13 05:59:53] 2025-10-13 09:59:02,045 | INFO     | -- intersect: -23567415027.519802
[2025-10-13 05:59:53] 2025-10-13 09:59:02,045 | INFO     | intersect: -23567415027.519802
[2025-10-13 05:59:53] 2025-10-13 09:59:02,046 | INFO     | chi2: 0.487905534242296
[2025-10-13 05:59:53] 2025-10-13 09:59:02,046 | INFO     | -- intersect: -23567415027.519802
[2025-10-13 05:59:53] 2025-10-13 09:59:02,046 | INFO     | current memory leak: 13.39 B/s (using 311 data points, chi2=0.49)
[2025-10-13 05:59:53] 2025-10-13 09:59:02,047 | INFO     | could have reported an average CPU frequency of 3110 MHz (15 samples)
[2025-10-13 05:59:53] 2025-10-13 09:59:02,047 | INFO     | ..............................
[2025-10-13 05:59:53] 2025-10-13 09:59:02,047 | INFO     | . Timing measurements:
[2025-10-13 05:59:53] 2025-10-13 09:59:02,047 | INFO     | . get job = 0 s
[2025-10-13 05:59:53] 2025-10-13 09:59:02,047 | INFO     | . initial setup = 3 s
[2025-10-13 05:59:53] 2025-10-13 09:59:02,047 | INFO     | . payload setup = 9 s
[2025-10-13 05:59:53] 2025-10-13 09:59:02,048 | INFO     | . stage-in = 0 s
[2025-10-13 05:59:53] 2025-10-13 09:59:02,048 | INFO     | . payload execution = 21120 s
[2025-10-13 05:59:53] 2025-10-13 09:59:02,048 | INFO     | . stage-out = 4 s
[2025-10-13 05:59:53] 2025-10-13 09:59:02,048 | INFO     | . log creation = 0 s
[2025-10-13 05:59:53] 2025-10-13 09:59:02,048 | INFO     | ..............................
[2025-10-13 05:59:53] 2025-10-13 09:59:02,239 | INFO     | 
[2025-10-13 05:59:53] 2025-10-13 09:59:02,241 | INFO     | job summary report
[2025-10-13 05:59:53] 2025-10-13 09:59:02,241 | INFO     | --------------------------------------------------
[2025-10-13 05:59:53] 2025-10-13 09:59:02,241 | INFO     | PanDA job id: 6841124687
[2025-10-13 05:59:53] 2025-10-13 09:59:02,241 | INFO     | task id: 46676269
[2025-10-13 05:59:53] 2025-10-13 09:59:02,241 | INFO     | errors: (none)
[2025-10-13 05:59:53] 2025-10-13 09:59:02,241 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:59:53] 2025-10-13 09:59:02,242 | INFO     | pilot state: finished 
[2025-10-13 05:59:53] 2025-10-13 09:59:02,242 | INFO     | transexitcode: 0
[2025-10-13 05:59:53] 2025-10-13 09:59:02,242 | INFO     | exeerrorcode: 0
[2025-10-13 05:59:53] 2025-10-13 09:59:02,242 | INFO     | exeerrordiag: 
[2025-10-13 05:59:53] 2025-10-13 09:59:02,242 | INFO     | exitcode: 0
[2025-10-13 05:59:53] 2025-10-13 09:59:02,242 | INFO     | exitmsg: OK
[2025-10-13 05:59:53] 2025-10-13 09:59:02,242 | INFO     | cpuconsumptiontime: 37809 s
[2025-10-13 05:59:53] 2025-10-13 09:59:02,242 | INFO     | nevents: 400
[2025-10-13 05:59:53] 2025-10-13 09:59:02,242 | INFO     | neventsw: 0
[2025-10-13 05:59:53] 2025-10-13 09:59:02,242 | INFO     | pid: 2330063
[2025-10-13 05:59:53] 2025-10-13 09:59:02,242 | INFO     | pgrp: 2330063
[2025-10-13 05:59:53] 2025-10-13 09:59:02,242 | INFO     | corecount: 12
[2025-10-13 05:59:53] 2025-10-13 09:59:02,261 | INFO     | event service: False
[2025-10-13 05:59:53] 2025-10-13 09:59:02,261 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348885, 11: 2349175, 12: 2349203, 21134: 2383114, 21135: 2383241, 21140: 2392351, 21148: 2392489}
[2025-10-13 05:59:53] 2025-10-13 09:59:02,261 | INFO     | --------------------------------------------------
[2025-10-13 05:59:53] 2025-10-13 09:59:02,261 | INFO     | 
[2025-10-13 05:59:53] 2025-10-13 09:59:02,261 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-10-13 05:59:53] 2025-10-13 09:59:02,306 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:59:53] 2025-10-13 09:59:02,307 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:59:53] 2025-10-13 09:59:02,307 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:59:53] 2025-10-13 09:59:02,307 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:59:53] 2025-10-13 09:59:02,307 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:59:53] 2025-10-13 09:59:02,307 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:59:53] 2025-10-13 09:59:02,307 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:59:53] 2025-10-13 09:59:02,307 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:59:53] 2025-10-13 09:59:02,307 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:59:53] 2025-10-13 09:59:02,308 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:59:53] 2025-10-13 09:59:02,308 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:59:53] 2025-10-13 09:59:02,308 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:59:53] 2025-10-13 09:59:02,308 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:59:53] 2025-10-13 09:59:02,308 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:59:53] 2025-10-13 09:59:02,308 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:59:53] 2025-10-13 09:59:02,308 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:59:53] 2025-10-13 09:59:02,308 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:59:53] 2025-10-13 09:59:02,309 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:59:53] 2025-10-13 09:59:02,309 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:59:53] 2025-10-13 09:59:02,309 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:59:53] 2025-10-13 09:59:02,309 | INFO     | job 6841124687 has completed (purged errors)
[2025-10-13 05:59:53] 2025-10-13 09:59:02,309 | INFO     | overall cleanup function is called
[2025-10-13 05:59:53] 2025-10-13 09:59:03,319 | INFO     | --- collectZombieJob: --- 10, [2330063]
[2025-10-13 05:59:53] 2025-10-13 09:59:03,319 | INFO     | zombie collector waiting for pid 2330063
[2025-10-13 05:59:53] 2025-10-13 09:59:03,319 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:59:53] 2025-10-13 09:59:03,319 | INFO     | collected zombie processes
[2025-10-13 05:59:53] 2025-10-13 09:59:03,325 | INFO     | will attempt to kill all subprocesses of pid=2330063
[2025-10-13 05:59:53] 2025-10-13 09:59:03,988 | INFO     | process IDs to be killed: [2330063] (in reverse order)
[2025-10-13 05:59:53] 2025-10-13 09:59:04,134 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:59:53] 2025-10-13 09:59:04,135 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:59:53] 2025-10-13 09:59:04,157 | INFO     | did not find any defunct processes belonging to 2330063
[2025-10-13 05:59:53] 2025-10-13 09:59:04,215 | INFO     | did not find any defunct processes belonging to 2330063
[2025-10-13 05:59:53] 2025-10-13 09:59:04,215 | INFO     | ready for new job
[2025-10-13 05:59:53] 2025-10-13 09:59:04,216 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:59:53] 2025-10-13 09:59:04,219 | INFO     | ***************************************
[2025-10-13 05:59:53] 2025-10-13 09:59:04,220 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:59:53] 2025-10-13 09:59:04,220 | INFO     | ***************************************
[2025-10-13 05:59:53] 2025-10-13 09:59:04,220 | INFO     | 
[2025-10-13 05:59:53] 2025-10-13 09:59:04,287 | INFO     | architecture information:
[2025-10-13 05:59:53] 2025-10-13 09:59:04,291 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:59:53] 2025-10-13 09:59:04,392 | INFO     | cat /etc/os-release:
[2025-10-13 05:59:53] NAME="CentOS Linux"
[2025-10-13 05:59:53] VERSION="7 (Core)"
[2025-10-13 05:59:53] ID="centos"
[2025-10-13 05:59:53] ID_LIKE="rhel fedora"
[2025-10-13 05:59:53] VERSION_ID="7"
[2025-10-13 05:59:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:59:53] ANSI_COLOR="0;31"
[2025-10-13 05:59:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:59:53] HOME_URL="https://www.centos.org/"
[2025-10-13 05:59:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:59:53] 
[2025-10-13 05:59:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:59:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:59:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:59:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:59:53] 
[2025-10-13 05:59:53] 2025-10-13 09:59:04,392 | INFO     | ***************************************
[2025-10-13 05:59:53] 2025-10-13 09:59:04,896 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-10-13 05:59:53] 2025-10-13 09:59:05,007 | INFO     | sufficient remaining disk space (128191561728 B)
[2025-10-13 05:59:53] 2025-10-13 09:59:05,008 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:59:53] 2025-10-13 09:59:05,008 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:59:53] 2025-10-13 09:59:05,008 | INFO     | update_server=False
[2025-10-13 05:59:53] 2025-10-13 09:59:05,008 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:59:53] 2025-10-13 09:59:05,009 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:59:53] 2025-10-13 09:59:05,033 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:59:53] 2025-10-13 09:59:05,246 | INFO     | all payload control threads have been joined
[2025-10-13 05:59:53] 2025-10-13 09:59:05,342 | INFO     | all job control threads have been joined
[2025-10-13 05:59:53] 2025-10-13 09:59:05,552 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:59:53] 2025-10-13 09:59:05,552 | INFO     | aborting loop
[2025-10-13 05:59:53] 2025-10-13 09:59:05,744 | INFO     | all data control threads have been joined
[2025-10-13 05:59:53] 2025-10-13 09:59:06,013 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:59:53] 2025-10-13 09:59:06,252 | INFO     | [payload] control thread has finished
[2025-10-13 05:59:53] 2025-10-13 09:59:06,274 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:59:53] 2025-10-13 09:59:06,296 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:59:53] 2025-10-13 09:59:06,332 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:59:53] 2025-10-13 09:59:06,348 | INFO     | [job] control thread has finished
[2025-10-13 05:59:53] 2025-10-13 09:59:06,560 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:59:53] 2025-10-13 09:59:06,751 | INFO     | [data] control thread has finished
[2025-10-13 05:59:53] 2025-10-13 09:59:06,965 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:59:53] 2025-10-13 09:59:07,004 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:59:53] 2025-10-13 09:59:07,013 | INFO     | [job] validate thread has finished
[2025-10-13 05:59:53] 2025-10-13 09:59:07,014 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:59:53] 2025-10-13 09:59:07,023 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:59:53] 2025-10-13 09:59:07,273 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:59:53] 2025-10-13 09:59:07,278 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:59:53] 2025-10-13 09:59:08,279 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:59:53] 2025-10-13 09:59:09,049 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:59:53] 2025-10-13 09:59:34,086 | INFO     | PID=2311161 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:59:53] 2025-10-13 09:59:34,086 | INFO     | .. there are 21 such processes running
[2025-10-13 05:59:53] 2025-10-13 09:59:34,087 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:59:53] 2025-10-13 09:59:34,087 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:59:53] 2025-10-13 09:59:34,087 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:59:53] 2025-10-13 09:59:47,611 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:59:53] 2025-10-13 09:59:48,000 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140365629466432)>', '<ExcThread(monitor, started 140365285807872)>']
[2025-10-13 05:59:53] 2025-10-13 09:59:48,171 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:59:53] 2025-10-13 09:59:48,172 | INFO     | [monitor] control thread has ended
[2025-10-13 05:59:53] 2025-10-13 09:59:53,027 | INFO     | all workflow threads have been joined
[2025-10-13 05:59:53] 2025-10-13 09:59:53,027 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:59:53] 2025-10-13 09:59:53,027 | INFO     | traces error code: 0
[2025-10-13 05:59:53] 2025-10-13 09:59:53,027 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:59:53] 2025-10-13 09:59:53,268 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:59:53] 2025-10-13 09:59:53,277 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:59:53] 2025-10-13 09:59:53,281 [wrapper] pilotpid: 2311161
[2025-10-13 05:59:53] 2025-10-13 09:59:53,284 [wrapper] Pilot exit status: 0
[2025-10-13 05:59:53] 2025-10-13 09:59:53,298 [wrapper] pandaids: 6841124687
[2025-10-13 05:59:53] 2025-10-13 09:59:53,399 [wrapper] cleanup supervisor_pilot 3381926 2311162
[2025-10-13 05:59:53] 2025-10-13 09:59:53,403 [wrapper] Test setup, not cleaning
[2025-10-13 05:59:53] 2025-10-13 09:59:53,411 [wrapper] apfmon messages muted
[2025-10-13 05:59:53] 2025-10-13 09:59:53,419 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:59:53] 2025-10-13 09:59:53,427 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:59:53]  *** Error codes and diagnostics ***
[2025-10-13 05:59:53]     "exeErrorCode": 0,
[2025-10-13 05:59:53]     "exeErrorDiag": "",
[2025-10-13 05:59:53]     "pilotErrorCode": 0,
[2025-10-13 05:59:53]     "pilotErrorDiag": "",
[2025-10-13 05:59:53]  *** Listing of results directory ***
[2025-10-13 05:59:53] total 415048
[2025-10-13 05:59:53] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 22:00 pilot3.tar.gz
[2025-10-13 05:59:53] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 22:05 queuedata.json
[2025-10-13 05:59:53] -rwx------. 1 boincer umatlas     36292 Oct 12 22:05 runpilot2-wrapper.sh
[2025-10-13 05:59:53] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:59:53] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:05 run_atlas
[2025-10-13 05:59:53] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:05 job.xml
[2025-10-13 05:59:53] -rw-r--r--. 2 boincer umatlas 219661171 Oct 13 00:05 EVNT.46676267._004377.pool.root.1
[2025-10-13 05:59:53] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:05 start_atlas.sh
[2025-10-13 05:59:53] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:05 shared
[2025-10-13 05:59:53] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 00:05 input.tar.gz
[2025-10-13 05:59:53] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:05 boinc_lockfile
[2025-10-13 05:59:53] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:05 pandaJob.out
[2025-10-13 05:59:53] -rw-------. 1 boincer umatlas    974373 Oct 13 00:06 agis_schedconf.cvmfs.json
[2025-10-13 05:59:53] drwx------. 5 boincer umatlas      4096 Oct 13 00:06 pilot3
[2025-10-13 05:59:53] -rw-r--r--. 1 boincer umatlas      6948 Oct 13 05:54 init_data.xml
[2025-10-13 05:59:53] -rw-------. 1 boincer umatlas 194771829 Oct 13 05:57 HITS.46676269._094554.pool.root.1
[2025-10-13 05:59:53] -rw-r--r--. 1 boincer umatlas       531 Oct 13 05:57 boinc_task_state.xml
[2025-10-13 05:59:53] -rw-------. 1 boincer umatlas      1049 Oct 13 05:58 memory_monitor_summary.json
[2025-10-13 05:59:53] -rw-------. 1 boincer umatlas        95 Oct 13 05:58 pilot_heartbeat.json
[2025-10-13 05:59:53] -rw-------. 1 boincer umatlas   1560580 Oct 13 05:58 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:59:53] -rw-------. 1 boincer umatlas    622077 Oct 13 05:58 log.46676269._094554.job.log.tgz.1
[2025-10-13 05:59:53] -rw-------. 1 boincer umatlas      7805 Oct 13 05:59 heartbeat.json
[2025-10-13 05:59:53] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 05:59 boinc_mmap_file
[2025-10-13 05:59:53] -rw-r--r--. 1 boincer umatlas        28 Oct 13 05:59 wrapper_checkpoint.txt
[2025-10-13 05:59:53] -rw-------. 1 boincer umatlas      4825 Oct 13 05:59 pilotlog.txt
[2025-10-13 05:59:53] -rw-------. 1 boincer umatlas   2713635 Oct 13 05:59 log.46676269._094554.job.log.1
[2025-10-13 05:59:53] -rw-------. 1 boincer umatlas       357 Oct 13 05:59 output.list
[2025-10-13 05:59:53] -rw-r--r--. 1 boincer umatlas       620 Oct 13 05:59 runtime_log
[2025-10-13 05:59:53] -rw-------. 1 boincer umatlas   3358720 Oct 13 05:59 result.tar.gz
[2025-10-13 05:59:53] -rw-------. 1 boincer umatlas       661 Oct 13 05:59 wjUMDmi7MS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmMSmNDmWBpiEn.diag
[2025-10-13 05:59:53] -rw-r--r--. 1 boincer umatlas      8706 Oct 13 05:59 runtime_log.err
[2025-10-13 05:59:53] -rw-r--r--. 1 boincer umatlas     21063 Oct 13 05:59 stderr.txt
[2025-10-13 05:59:53] HITS file was successfully produced:
[2025-10-13 05:59:53] -rw-------. 1 boincer umatlas 194771829 Oct 13 05:57 shared/HITS.pool.root.1
[2025-10-13 05:59:53]  *** Contents of shared directory: ***
[2025-10-13 05:59:53] total 408588
[2025-10-13 05:59:53] -rw-r--r--. 2 boincer umatlas 219661171 Oct 13 00:05 ATLAS.root_0
[2025-10-13 05:59:53] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:05 start_atlas.sh
[2025-10-13 05:59:53] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 00:05 input.tar.gz
[2025-10-13 05:59:53] -rw-------. 1 boincer umatlas 194771829 Oct 13 05:57 HITS.pool.root.1
[2025-10-13 05:59:53] -rw-------. 1 boincer umatlas   3358720 Oct 13 05:59 result.tar.gz
05:59:56 (2303915): run_atlas exited; CPU time 38449.448296
05:59:56 (2303915): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN