Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:47 (2331656): wrapper (7.7.26015): starting
00:05:47 (2331656): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 00:05:47] Arguments: --nthreads 8
[2025-10-13 00:05:47] Threads: 8
[2025-10-13 00:05:47] Checking for CVMFS
[2025-10-13 00:05:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:05:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:05:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:05:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:05:49] 2.13.2.0 97685 139052 284104 151647 1 684 29157557 32935936 25679 16776704 0 221624661 99.619 229651355 29403 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:05:49] CVMFS is ok
[2025-10-13 00:05:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:05:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:05:50] Further information can be found at the LHC@home message board.
[2025-10-13 00:05:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:05:50] Checking for apptainer binary...
[2025-10-13 00:05:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:05:50] Running /usr/bin/apptainer --version
[2025-10-13 00:05:50] apptainer version 1.4.3-1.el9
[2025-10-13 00:05:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:05:50] c6-4-5-1.aglt2.org
[2025-10-13 00:05:50] apptainer works
[2025-10-13 00:05:50] Set ATHENA_PROC_NUMBER=8
[2025-10-13 00:05:50] Set ATHENA_CORE_NUMBER=8
[2025-10-13 00:05:50] Starting ATLAS job with PandaID=6841124679
[2025-10-13 00:05:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:29:12]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:29:12] 2025-10-13 13:28:03,844 | INFO     | intersect: -11192201232.617332
[2025-10-13 09:29:12] 2025-10-13 13:28:03,845 | INFO     | chi2: 5.071102503016406
[2025-10-13 09:29:12] 2025-10-13 13:28:03,846 | INFO     | sum of square deviations: 50195831104.25678
[2025-10-13 09:29:12] 2025-10-13 13:28:03,852 | INFO     | sum of deviations: 350650333417.7249
[2025-10-13 09:29:12] 2025-10-13 13:28:03,853 | INFO     | mean x: 1760345165.146789
[2025-10-13 09:29:12] 2025-10-13 13:28:03,853 | INFO     | mean y: 2106740.928440367
[2025-10-13 09:29:12] 2025-10-13 13:28:03,853 | INFO     | -- intersect: -12295042355.117811
[2025-10-13 09:29:12] 2025-10-13 13:28:03,853 | INFO     | intersect: -12295042355.117811
[2025-10-13 09:29:12] 2025-10-13 13:28:03,854 | INFO     | chi2: 4.421109739096632
[2025-10-13 09:29:12] 2025-10-13 13:28:03,854 | INFO     | current chi2=4.421109739096632 (change=12.817582833972367 %)
[2025-10-13 09:29:12] 2025-10-13 13:28:03,854 | INFO     | right removable region: 544
[2025-10-13 09:29:12] 2025-10-13 13:28:03,854 | INFO     | sum of square deviations: 50195782304.25681
[2025-10-13 09:29:12] 2025-10-13 13:28:03,860 | INFO     | sum of deviations: 198237772202.28455
[2025-10-13 09:29:12] 2025-10-13 13:28:03,861 | INFO     | mean x: 1760345470.146789
[2025-10-13 09:29:12] 2025-10-13 13:28:03,861 | INFO     | mean y: 2118482.1339449543
[2025-10-13 09:29:12] 2025-10-13 13:28:03,861 | INFO     | -- intersect: -6949998773.316995
[2025-10-13 09:29:12] 2025-10-13 13:28:03,861 | INFO     | intersect: -6949998773.316995
[2025-10-13 09:29:12] 2025-10-13 13:28:03,862 | INFO     | chi2: 2.209646444574932
[2025-10-13 09:29:12] 2025-10-13 13:28:03,862 | INFO     | current chi2=2.209646444574932 (change=56.426705173863375 %)
[2025-10-13 09:29:12] 2025-10-13 13:28:03,862 | INFO     | sum of square deviations: 48826857819.14813
[2025-10-13 09:29:12] 2025-10-13 13:28:03,868 | INFO     | sum of deviations: 126195321857.59279
[2025-10-13 09:29:12] 2025-10-13 13:28:03,868 | INFO     | mean x: 1760345622.648148
[2025-10-13 09:29:12] 2025-10-13 13:28:03,869 | INFO     | mean y: 2126506.7925925925
[2025-10-13 09:29:12] 2025-10-13 13:28:03,869 | INFO     | -- intersect: -4547569958.491098
[2025-10-13 09:29:12] 2025-10-13 13:28:03,869 | INFO     | intersect: -4547569958.491098
[2025-10-13 09:29:12] 2025-10-13 13:28:03,869 | INFO     | chi2: 1.408755842818515
[2025-10-13 09:29:12] 2025-10-13 13:28:03,869 | INFO     | current chi2=1.408755842818515 (change=36.24519224434042 %)
[2025-10-13 09:29:12] 2025-10-13 13:28:03,870 | INFO     | sum of square deviations: 47483050084.03752
[2025-10-13 09:29:12] 2025-10-13 13:28:03,876 | INFO     | sum of deviations: 74958087465.28976
[2025-10-13 09:29:12] 2025-10-13 13:28:03,876 | INFO     | mean x: 1760345775.1495328
[2025-10-13 09:29:12] 2025-10-13 13:28:03,876 | INFO     | mean y: 2132313.3588785045
[2025-10-13 09:29:12] 2025-10-13 13:28:03,876 | INFO     | -- intersect: -2776799375.9339843
[2025-10-13 09:29:12] 2025-10-13 13:28:03,876 | INFO     | intersect: -2776799375.9339843
[2025-10-13 09:29:12] 2025-10-13 13:28:03,877 | INFO     | chi2: 0.9790594663429453
[2025-10-13 09:29:12] 2025-10-13 13:28:03,877 | INFO     | current chi2=0.9790594663429453 (change=30.50183455607687 %)
[2025-10-13 09:29:12] 2025-10-13 13:28:03,878 | INFO     | sum of square deviations: 46164126536.42473
[2025-10-13 09:29:12] 2025-10-13 13:28:03,883 | INFO     | sum of deviations: 48759659440.745285
[2025-10-13 09:29:12] 2025-10-13 13:28:03,883 | INFO     | mean x: 1760345927.6509433
[2025-10-13 09:29:12] 2025-10-13 13:28:03,884 | INFO     | mean y: 2135336.0094339624
[2025-10-13 09:29:12] 2025-10-13 13:28:03,884 | INFO     | -- intersect: -1857184321.2668197
[2025-10-13 09:29:12] 2025-10-13 13:28:03,884 | INFO     | intersect: -1857184321.2668197
[2025-10-13 09:29:12] 2025-10-13 13:28:03,884 | INFO     | chi2: 0.85393636376712
[2025-10-13 09:29:12] 2025-10-13 13:28:03,884 | INFO     | current chi2=0.85393636376712 (change=12.779928786470371 %)
[2025-10-13 09:29:12] 2025-10-13 13:28:03,885 | INFO     | left removable region: 40
[2025-10-13 09:29:12] 2025-10-13 13:28:03,885 | INFO     | sum of square deviations: 39697981933.9287
[2025-10-13 09:29:12] 2025-10-13 13:28:03,890 | INFO     | sum of deviations: 59817273338.66668
[2025-10-13 09:29:12] 2025-10-13 13:28:03,890 | INFO     | mean x: 1760346354.6547618
[2025-10-13 09:29:12] 2025-10-13 13:28:03,891 | INFO     | mean y: 2139484.388888889
[2025-10-13 09:29:12] 2025-10-13 13:28:03,891 | INFO     | -- intersect: -2650366107.51661
[2025-10-13 09:29:12] 2025-10-13 13:28:03,892 | INFO     | intersect: -2650366107.51661
[2025-10-13 09:29:12] 2025-10-13 13:28:03,892 | INFO     | chi2: 0.1818564977996257
[2025-10-13 09:29:12] 2025-10-13 13:28:03,893 | INFO     | -- intersect: -2650366107.51661
[2025-10-13 09:29:12] 2025-10-13 13:28:03,893 | INFO     | current memory leak: 1.51 B/s (using 504 data points, chi2=0.18)
[2025-10-13 09:29:12] 2025-10-13 13:28:03,893 | INFO     | could have reported an average CPU frequency of 2891 MHz (22 samples)
[2025-10-13 09:29:12] 2025-10-13 13:28:03,894 | INFO     | ..............................
[2025-10-13 09:29:12] 2025-10-13 13:28:03,894 | INFO     | . Timing measurements:
[2025-10-13 09:29:12] 2025-10-13 13:28:03,894 | INFO     | . get job = 0 s
[2025-10-13 09:29:12] 2025-10-13 13:28:03,894 | INFO     | . initial setup = 5 s
[2025-10-13 09:29:12] 2025-10-13 13:28:03,894 | INFO     | . payload setup = 41 s
[2025-10-13 09:29:12] 2025-10-13 13:28:03,894 | INFO     | . stage-in = 0 s
[2025-10-13 09:29:12] 2025-10-13 13:28:03,894 | INFO     | . payload execution = 33530 s
[2025-10-13 09:29:12] 2025-10-13 13:28:03,894 | INFO     | . stage-out = 2 s
[2025-10-13 09:29:12] 2025-10-13 13:28:03,894 | INFO     | . log creation = 0 s
[2025-10-13 09:29:12] 2025-10-13 13:28:03,894 | INFO     | ..............................
[2025-10-13 09:29:12] 2025-10-13 13:28:03,988 | INFO     | 
[2025-10-13 09:29:12] 2025-10-13 13:28:03,988 | INFO     | job summary report
[2025-10-13 09:29:12] 2025-10-13 13:28:03,988 | INFO     | --------------------------------------------------
[2025-10-13 09:29:12] 2025-10-13 13:28:03,988 | INFO     | PanDA job id: 6841124679
[2025-10-13 09:29:12] 2025-10-13 13:28:03,988 | INFO     | task id: 46676269
[2025-10-13 09:29:12] 2025-10-13 13:28:03,988 | INFO     | errors: (none)
[2025-10-13 09:29:12] 2025-10-13 13:28:03,988 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:29:12] 2025-10-13 13:28:03,988 | INFO     | pilot state: finished 
[2025-10-13 09:29:12] 2025-10-13 13:28:03,988 | INFO     | transexitcode: 0
[2025-10-13 09:29:12] 2025-10-13 13:28:03,988 | INFO     | exeerrorcode: 0
[2025-10-13 09:29:12] 2025-10-13 13:28:03,988 | INFO     | exeerrordiag: 
[2025-10-13 09:29:12] 2025-10-13 13:28:03,988 | INFO     | exitcode: 0
[2025-10-13 09:29:12] 2025-10-13 13:28:03,989 | INFO     | exitmsg: OK
[2025-10-13 09:29:12] 2025-10-13 13:28:03,989 | INFO     | cpuconsumptiontime: 43202 s
[2025-10-13 09:29:12] 2025-10-13 13:28:03,989 | INFO     | nevents: 400
[2025-10-13 09:29:12] 2025-10-13 13:28:03,989 | INFO     | neventsw: 0
[2025-10-13 09:29:12] 2025-10-13 13:28:03,989 | INFO     | pid: 2402072
[2025-10-13 09:29:12] 2025-10-13 13:28:03,989 | INFO     | pgrp: 2402072
[2025-10-13 09:29:12] 2025-10-13 13:28:03,989 | INFO     | corecount: 8
[2025-10-13 09:29:12] 2025-10-13 13:28:03,989 | INFO     | event service: False
[2025-10-13 09:29:12] 2025-10-13 13:28:03,989 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348714, 3: 2348941, 4: 2348941, 15: 2348969, 25: 2349125, 35: 2349415, 37: 2349443, 33576: 2389217, 33580: 2398551, 33590: 2398
[2025-10-13 09:29:12] 2025-10-13 13:28:03,989 | INFO     | --------------------------------------------------
[2025-10-13 09:29:12] 2025-10-13 13:28:03,989 | INFO     | 
[2025-10-13 09:29:12] 2025-10-13 13:28:03,989 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-10-13 09:29:12] 2025-10-13 13:28:04,073 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:29:12] 2025-10-13 13:28:04,073 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:29:12] 2025-10-13 13:28:04,073 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:29:12] 2025-10-13 13:28:04,073 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:29:12] 2025-10-13 13:28:04,073 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:29:12] 2025-10-13 13:28:04,074 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:29:12] 2025-10-13 13:28:04,074 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:29:12] 2025-10-13 13:28:04,074 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:29:12] 2025-10-13 13:28:04,074 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:29:12] 2025-10-13 13:28:04,074 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:29:12] 2025-10-13 13:28:04,074 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:29:12] 2025-10-13 13:28:04,074 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:29:12] 2025-10-13 13:28:04,074 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:29:12] 2025-10-13 13:28:04,074 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:29:12] 2025-10-13 13:28:04,074 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:29:12] 2025-10-13 13:28:04,074 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:29:12] 2025-10-13 13:28:04,074 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:29:12] 2025-10-13 13:28:04,074 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:29:12] 2025-10-13 13:28:04,074 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:29:12] 2025-10-13 13:28:04,075 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:29:12] 2025-10-13 13:28:04,075 | INFO     | job 6841124679 has completed (purged errors)
[2025-10-13 09:29:12] 2025-10-13 13:28:04,075 | INFO     | overall cleanup function is called
[2025-10-13 09:29:12] 2025-10-13 13:28:05,084 | INFO     | --- collectZombieJob: --- 10, [2402072]
[2025-10-13 09:29:12] 2025-10-13 13:28:05,084 | INFO     | zombie collector waiting for pid 2402072
[2025-10-13 09:29:12] 2025-10-13 13:28:05,084 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:29:12] 2025-10-13 13:28:05,084 | INFO     | collected zombie processes
[2025-10-13 09:29:12] 2025-10-13 13:28:05,084 | INFO     | will attempt to kill all subprocesses of pid=2402072
[2025-10-13 09:29:12] 2025-10-13 13:28:05,441 | INFO     | process IDs to be killed: [2402072] (in reverse order)
[2025-10-13 09:29:12] 2025-10-13 13:28:05,527 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:29:12] 2025-10-13 13:28:05,528 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:29:12] 2025-10-13 13:28:05,537 | INFO     | did not find any defunct processes belonging to 2402072
[2025-10-13 09:29:12] 2025-10-13 13:28:05,548 | INFO     | did not find any defunct processes belonging to 2402072
[2025-10-13 09:29:12] 2025-10-13 13:28:05,549 | INFO     | ready for new job
[2025-10-13 09:29:12] 2025-10-13 13:28:05,549 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:29:12] 2025-10-13 13:28:05,551 | INFO     | ***************************************
[2025-10-13 09:29:12] 2025-10-13 13:28:05,553 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:29:12] 2025-10-13 13:28:05,553 | INFO     | ***************************************
[2025-10-13 09:29:12] 2025-10-13 13:28:05,553 | INFO     | 
[2025-10-13 09:29:12] 2025-10-13 13:28:05,569 | INFO     | architecture information:
[2025-10-13 09:29:12] 2025-10-13 13:28:05,578 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:29:12] 2025-10-13 13:28:05,660 | INFO     | cat /etc/os-release:
[2025-10-13 09:29:12] NAME="CentOS Linux"
[2025-10-13 09:29:12] VERSION="7 (Core)"
[2025-10-13 09:29:12] ID="centos"
[2025-10-13 09:29:12] ID_LIKE="rhel fedora"
[2025-10-13 09:29:12] VERSION_ID="7"
[2025-10-13 09:29:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:29:12] ANSI_COLOR="0;31"
[2025-10-13 09:29:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:29:12] HOME_URL="https://www.centos.org/"
[2025-10-13 09:29:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:29:12] 
[2025-10-13 09:29:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:29:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:29:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:29:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:29:12] 
[2025-10-13 09:29:12] 2025-10-13 13:28:05,660 | INFO     | ***************************************
[2025-10-13 09:29:12] 2025-10-13 13:28:06,164 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-10-13 09:29:12] 2025-10-13 13:28:06,225 | INFO     | sufficient remaining disk space (74315726848 B)
[2025-10-13 09:29:12] 2025-10-13 13:28:06,225 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:29:12] 2025-10-13 13:28:06,225 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:29:12] 2025-10-13 13:28:06,225 | INFO     | update_server=False
[2025-10-13 09:29:12] 2025-10-13 13:28:06,226 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:29:12] 2025-10-13 13:28:06,227 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:29:12] 2025-10-13 13:28:06,227 | INFO     | aborting loop
[2025-10-13 09:29:12] 2025-10-13 13:28:06,733 | INFO     | all job control threads have been joined
[2025-10-13 09:29:12] 2025-10-13 13:28:06,935 | INFO     | all payload control threads have been joined
[2025-10-13 09:29:12] 2025-10-13 13:28:07,071 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:29:12] 2025-10-13 13:28:07,232 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:29:12] 2025-10-13 13:28:07,232 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:29:12] 2025-10-13 13:28:07,257 | INFO     | all data control threads have been joined
[2025-10-13 09:29:12] 2025-10-13 13:28:07,493 | INFO     | [job] validate thread has finished
[2025-10-13 09:29:12] 2025-10-13 13:28:07,631 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:29:12] 2025-10-13 13:28:07,730 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:29:12] 2025-10-13 13:28:07,739 | INFO     | [job] control thread has finished
[2025-10-13 09:29:12] 2025-10-13 13:28:07,941 | INFO     | [payload] control thread has finished
[2025-10-13 09:29:12] 2025-10-13 13:28:07,983 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:29:12] 2025-10-13 13:28:08,184 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:29:12] 2025-10-13 13:28:08,263 | INFO     | [data] control thread has finished
[2025-10-13 09:29:12] 2025-10-13 13:28:08,370 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:29:12] 2025-10-13 13:28:08,538 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:29:12] 2025-10-13 13:28:08,996 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:29:12] 2025-10-13 13:28:09,077 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:29:12] 2025-10-13 13:28:09,153 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:29:12] 2025-10-13 13:28:10,002 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:29:12] 2025-10-13 13:28:13,161 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:29:12] 2025-10-13 13:28:16,524 | INFO     | job.realtimelogging is not enabled
[2025-10-13 09:29:12] 2025-10-13 13:28:17,537 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:29:12] 2025-10-13 13:28:35,696 | INFO     | PID=2347106 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 09:29:12] 2025-10-13 13:28:35,696 | INFO     | .. there are 22 such processes running
[2025-10-13 09:29:12] 2025-10-13 13:28:35,697 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:29:12] 2025-10-13 13:28:35,697 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:29:12] 2025-10-13 13:28:35,697 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:29:12] 2025-10-13 13:29:05,133 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:29:12] 2025-10-13 13:29:06,953 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140385794565952)>', '<ExcThread(monitor, started 140384990635776)>']
[2025-10-13 09:29:12] 2025-10-13 13:29:07,877 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:29:12] 2025-10-13 13:29:07,878 | INFO     | [monitor] control thread has ended
[2025-10-13 09:29:12] 2025-10-13 13:29:11,979 | INFO     | all workflow threads have been joined
[2025-10-13 09:29:12] 2025-10-13 13:29:11,979 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:29:12] 2025-10-13 13:29:11,980 | INFO     | traces error code: 0
[2025-10-13 09:29:12] 2025-10-13 13:29:11,981 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:29:12] 2025-10-13 13:29:12,162 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:29:12] 2025-10-13 13:29:12,166 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:29:12] 2025-10-13 13:29:12,171 [wrapper] pilotpid: 2347106
[2025-10-13 09:29:12] 2025-10-13 13:29:12,174 [wrapper] Pilot exit status: 0
[2025-10-13 09:29:12] 2025-10-13 13:29:12,200 [wrapper] pandaids: 6841124679
[2025-10-13 09:29:12] 2025-10-13 13:29:12,291 [wrapper] cleanup supervisor_pilot  232271 2347107
[2025-10-13 09:29:12] 2025-10-13 13:29:12,301 [wrapper] Test setup, not cleaning
[2025-10-13 09:29:12] 2025-10-13 13:29:12,308 [wrapper] apfmon messages muted
[2025-10-13 09:29:12] 2025-10-13 13:29:12,313 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:29:12] 2025-10-13 13:29:12,321 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:29:12]  *** Error codes and diagnostics ***
[2025-10-13 09:29:12]     "exeErrorCode": 0,
[2025-10-13 09:29:12]     "exeErrorDiag": "",
[2025-10-13 09:29:12]     "pilotErrorCode": 0,
[2025-10-13 09:29:12]     "pilotErrorDiag": "",
[2025-10-13 09:29:12]  *** Listing of results directory ***
[2025-10-13 09:29:12] total 415556
[2025-10-13 09:29:12] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 22:00 pilot3.tar.gz
[2025-10-13 09:29:12] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 22:05 queuedata.json
[2025-10-13 09:29:12] -rwx------. 1 boincer umatlas     36292 Oct 12 22:05 runpilot2-wrapper.sh
[2025-10-13 09:29:12] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:29:12] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:05 run_atlas
[2025-10-13 09:29:12] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:05 job.xml
[2025-10-13 09:29:12] -rw-r--r--. 2 boincer umatlas 219661171 Oct 13 00:05 EVNT.46676267._004377.pool.root.1
[2025-10-13 09:29:12] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:05 start_atlas.sh
[2025-10-13 09:29:12] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:05 shared
[2025-10-13 09:29:12] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 00:05 input.tar.gz
[2025-10-13 09:29:12] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:05 boinc_lockfile
[2025-10-13 09:29:12] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:05 pandaJob.out
[2025-10-13 09:29:12] -rw-------. 1 boincer umatlas    974373 Oct 13 00:06 agis_schedconf.cvmfs.json
[2025-10-13 09:29:12] drwx------. 5 boincer umatlas      4096 Oct 13 00:07 pilot3
[2025-10-13 09:29:12] -rw-r--r--. 1 boincer umatlas      6856 Oct 13 09:22 init_data.xml
[2025-10-13 09:29:12] -rw-------. 1 boincer umatlas 191922423 Oct 13 09:27 HITS.46676269._094546.pool.root.1
[2025-10-13 09:29:12] -rw-r--r--. 1 boincer umatlas       531 Oct 13 09:27 boinc_task_state.xml
[2025-10-13 09:29:12] -rw-------. 1 boincer umatlas      1055 Oct 13 09:27 memory_monitor_summary.json
[2025-10-13 09:29:12] -rw-------. 1 boincer umatlas   1560580 Oct 13 09:27 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:29:12] -rw-------. 1 boincer umatlas    720920 Oct 13 09:27 log.46676269._094546.job.log.tgz.1
[2025-10-13 09:29:12] -rw-------. 1 boincer umatlas      7844 Oct 13 09:28 heartbeat.json
[2025-10-13 09:29:12] -rw-------. 1 boincer umatlas        95 Oct 13 09:28 pilot_heartbeat.json
[2025-10-13 09:29:12] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 09:29 boinc_mmap_file
[2025-10-13 09:29:12] -rw-r--r--. 1 boincer umatlas        28 Oct 13 09:29 wrapper_checkpoint.txt
[2025-10-13 09:29:12] -rw-------. 1 boincer umatlas      4896 Oct 13 09:29 pilotlog.txt
[2025-10-13 09:29:12] -rw-------. 1 boincer umatlas   4301976 Oct 13 09:29 log.46676269._094546.job.log.1
[2025-10-13 09:29:12] -rw-------. 1 boincer umatlas       357 Oct 13 09:29 output.list
[2025-10-13 09:29:12] -rw-r--r--. 1 boincer umatlas       620 Oct 13 09:29 runtime_log
[2025-10-13 09:29:12] -rw-------. 1 boincer umatlas   5038080 Oct 13 09:29 result.tar.gz
[2025-10-13 09:29:12] -rw-r--r--. 1 boincer umatlas      8704 Oct 13 09:29 runtime_log.err
[2025-10-13 09:29:12] -rw-------. 1 boincer umatlas       661 Oct 13 09:29 62JMDmi7MS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmESmNDmaXQ9En.diag
[2025-10-13 09:29:12] -rw-r--r--. 1 boincer umatlas     21022 Oct 13 09:29 stderr.txt
[2025-10-13 09:29:12] HITS file was successfully produced:
[2025-10-13 09:29:12] -rw-------. 1 boincer umatlas 191922423 Oct 13 09:27 shared/HITS.pool.root.1
[2025-10-13 09:29:12]  *** Contents of shared directory: ***
[2025-10-13 09:29:12] total 407444
[2025-10-13 09:29:12] -rw-r--r--. 2 boincer umatlas 219661171 Oct 13 00:05 ATLAS.root_0
[2025-10-13 09:29:12] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:05 start_atlas.sh
[2025-10-13 09:29:12] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 00:05 input.tar.gz
[2025-10-13 09:29:12] -rw-------. 1 boincer umatlas 191922423 Oct 13 09:27 HITS.pool.root.1
[2025-10-13 09:29:12] -rw-------. 1 boincer umatlas   5038080 Oct 13 09:29 result.tar.gz
09:29:14 (2331656): run_atlas exited; CPU time 44456.478507
09:29:14 (2331656): called boinc_finish(0)

</stderr_txt>
]]>

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