Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:06:11 (604320): wrapper (7.7.26015): starting
00:06:11 (604320): wrapper: running run_atlas (--nthreads 10)
[2025-10-13 00:06:11] Arguments: --nthreads 10
[2025-10-13 00:06:11] Threads: 10
[2025-10-13 00:06:11] Checking for CVMFS
[2025-10-13 00:06:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:06:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:06:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:06:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:06:13] 2.13.2.0 20986 301680 1151664 151647 3 546 32018445 32935937 50590 130560 0 484067698 99.776 283791149 20190 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:06:13] CVMFS is ok
[2025-10-13 00:06:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:06:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:06:13] Further information can be found at the LHC@home message board.
[2025-10-13 00:06:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:06:13] Checking for apptainer binary...
[2025-10-13 00:06:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:06:13] Running /usr/bin/apptainer --version
[2025-10-13 00:06:14] apptainer version 1.4.3-1.el9
[2025-10-13 00:06:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:06:14] lc-10-10.aglt2.org
[2025-10-13 00:06:14] apptainer works
[2025-10-13 00:06:14] Set ATHENA_PROC_NUMBER=10
[2025-10-13 00:06:14] Set ATHENA_CORE_NUMBER=10
[2025-10-13 00:06:14] Starting ATLAS job with PandaID=6841124676
[2025-10-13 00:06:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:03:59]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:03:59] 2025-10-13 12:02:25,832 | INFO     | intersect: -23116344516.58253
[2025-10-13 08:03:59] 2025-10-13 12:02:25,833 | INFO     | chi2: 5.2193845660884435
[2025-10-13 08:03:59] 2025-10-13 12:02:25,833 | INFO     | current chi2=5.2193845660884435 (change=0.3176410215266589 %)
[2025-10-13 08:03:59] 2025-10-13 12:02:25,833 | INFO     | right removable region: 458
[2025-10-13 08:03:59] 2025-10-13 12:02:25,834 | INFO     | sum of square deviations: 29986072016.70595
[2025-10-13 08:03:59] 2025-10-13 12:02:25,839 | INFO     | sum of deviations: 274744099482.2351
[2025-10-13 08:03:59] 2025-10-13 12:02:25,839 | INFO     | mean x: 1760342900.1764705
[2025-10-13 08:03:59] 2025-10-13 12:02:25,839 | INFO     | mean y: 2184704.947712418
[2025-10-13 08:03:59] 2025-10-13 12:02:25,839 | INFO     | -- intersect: -16126764249.069372
[2025-10-13 08:03:59] 2025-10-13 12:02:25,839 | INFO     | intersect: -16126764249.069372
[2025-10-13 08:03:59] 2025-10-13 12:02:25,840 | INFO     | chi2: 2.008312846069737
[2025-10-13 08:03:59] 2025-10-13 12:02:25,840 | INFO     | current chi2=2.008312846069737 (change=61.64425910217348 %)
[2025-10-13 08:03:59] 2025-10-13 12:02:25,841 | INFO     | sum of square deviations: 29016811081.753326
[2025-10-13 08:03:59] 2025-10-13 12:02:25,846 | INFO     | sum of deviations: 198314352503.79285
[2025-10-13 08:03:59] 2025-10-13 12:02:25,846 | INFO     | mean x: 1760343052.6740088
[2025-10-13 08:03:59] 2025-10-13 12:02:25,846 | INFO     | mean y: 2196721.7621145374
[2025-10-13 08:03:59] 2025-10-13 12:02:25,846 | INFO     | -- intersect: -12028804606.813301
[2025-10-13 08:03:59] 2025-10-13 12:02:25,846 | INFO     | intersect: -12028804606.813301
[2025-10-13 08:03:59] 2025-10-13 12:02:25,847 | INFO     | chi2: 0.8155501800568802
[2025-10-13 08:03:59] 2025-10-13 12:02:25,847 | INFO     | current chi2=0.8155501800568802 (change=59.39127802459115 %)
[2025-10-13 08:03:59] 2025-10-13 12:02:25,848 | INFO     | sum of square deviations: 28068611069.100163
[2025-10-13 08:03:59] 2025-10-13 12:02:25,852 | INFO     | sum of deviations: 147740610433.33392
[2025-10-13 08:03:59] 2025-10-13 12:02:25,853 | INFO     | mean x: 1760343205.1759465
[2025-10-13 08:03:59] 2025-10-13 12:02:25,853 | INFO     | mean y: 2204843.9198218263
[2025-10-13 08:03:59] 2025-10-13 12:02:25,853 | INFO     | -- intersect: -9263454189.389925
[2025-10-13 08:03:59] 2025-10-13 12:02:25,853 | INFO     | intersect: -9263454189.389925
[2025-10-13 08:03:59] 2025-10-13 12:02:25,854 | INFO     | chi2: 0.2975662419098586
[2025-10-13 08:03:59] 2025-10-13 12:02:25,854 | INFO     | current chi2=0.2975662419098586 (change=63.51343556945754 %)
[2025-10-13 08:03:59] 2025-10-13 12:02:25,855 | INFO     | sum of square deviations: 27141295168.943905
[2025-10-13 08:03:59] 2025-10-13 12:02:25,859 | INFO     | sum of deviations: 121670497235.17108
[2025-10-13 08:03:59] 2025-10-13 12:02:25,860 | INFO     | mean x: 1760343357.677928
[2025-10-13 08:03:59] 2025-10-13 12:02:25,860 | INFO     | mean y: 2209123.099099099
[2025-10-13 08:03:59] 2025-10-13 12:02:25,860 | INFO     | -- intersect: -7889155319.905783
[2025-10-13 08:03:59] 2025-10-13 12:02:25,860 | INFO     | intersect: -7889155319.905783
[2025-10-13 08:03:59] 2025-10-13 12:02:25,861 | INFO     | chi2: 0.16687313129728942
[2025-10-13 08:03:59] 2025-10-13 12:02:25,861 | INFO     | current chi2=0.16687313129728942 (change=43.92067788797087 %)
[2025-10-13 08:03:59] 2025-10-13 12:02:25,861 | INFO     | sum of square deviations: 26234657780.141182
[2025-10-13 08:03:59] 2025-10-13 12:02:25,866 | INFO     | sum of deviations: 116604777699.99318
[2025-10-13 08:03:59] 2025-10-13 12:02:25,867 | INFO     | mean x: 1760343510.1776764
[2025-10-13 08:03:59] 2025-10-13 12:02:25,867 | INFO     | mean y: 2209973.346241458
[2025-10-13 08:03:59] 2025-10-13 12:02:25,867 | INFO     | -- intersect: -7821961601.526463
[2025-10-13 08:03:59] 2025-10-13 12:02:25,867 | INFO     | intersect: -7821961601.526463
[2025-10-13 08:03:59] 2025-10-13 12:02:25,867 | INFO     | chi2: 0.16474700712938758
[2025-10-13 08:03:59] 2025-10-13 12:02:25,868 | INFO     | current chi2=0.16474700712938758 (change=1.274096165975387 %)
[2025-10-13 08:03:59] 2025-10-13 12:02:25,868 | INFO     | left removable region: 50
[2025-10-13 08:03:59] 2025-10-13 12:02:25,868 | INFO     | sum of square deviations: 21060207725.294083
[2025-10-13 08:03:59] 2025-10-13 12:02:25,872 | INFO     | sum of deviations: 95710291385.26466
[2025-10-13 08:03:59] 2025-10-13 12:02:25,873 | INFO     | mean x: 1760344089.6764705
[2025-10-13 08:03:59] 2025-10-13 12:02:25,873 | INFO     | mean y: 2214149.2671568627
[2025-10-13 08:03:59] 2025-10-13 12:02:25,873 | INFO     | -- intersect: -7997851565.132666
[2025-10-13 08:03:59] 2025-10-13 12:02:25,873 | INFO     | intersect: -7997851565.132666
[2025-10-13 08:03:59] 2025-10-13 12:02:25,873 | INFO     | chi2: 0.14092218133714643
[2025-10-13 08:03:59] 2025-10-13 12:02:25,874 | INFO     | -- intersect: -7997851565.132666
[2025-10-13 08:03:59] 2025-10-13 12:02:25,874 | INFO     | current memory leak: 4.54 B/s (using 408 data points, chi2=0.14)
[2025-10-13 08:03:59] 2025-10-13 12:02:25,875 | INFO     | could have reported an average CPU frequency of 2649 MHz (19 samples)
[2025-10-13 08:03:59] 2025-10-13 12:02:25,875 | INFO     | ..............................
[2025-10-13 08:03:59] 2025-10-13 12:02:25,875 | INFO     | . Timing measurements:
[2025-10-13 08:03:59] 2025-10-13 12:02:25,875 | INFO     | . get job = 0 s
[2025-10-13 08:03:59] 2025-10-13 12:02:25,875 | INFO     | . initial setup = 9 s
[2025-10-13 08:03:59] 2025-10-13 12:02:25,875 | INFO     | . payload setup = 58 s
[2025-10-13 08:03:59] 2025-10-13 12:02:25,875 | INFO     | . stage-in = 0 s
[2025-10-13 08:03:59] 2025-10-13 12:02:25,875 | INFO     | . payload execution = 28334 s
[2025-10-13 08:03:59] 2025-10-13 12:02:25,875 | INFO     | . stage-out = 3 s
[2025-10-13 08:03:59] 2025-10-13 12:02:25,875 | INFO     | . log creation = 0 s
[2025-10-13 08:03:59] 2025-10-13 12:02:25,876 | INFO     | ..............................
[2025-10-13 08:03:59] 2025-10-13 12:02:26,011 | INFO     | 
[2025-10-13 08:03:59] 2025-10-13 12:02:26,011 | INFO     | job summary report
[2025-10-13 08:03:59] 2025-10-13 12:02:26,012 | INFO     | --------------------------------------------------
[2025-10-13 08:03:59] 2025-10-13 12:02:26,012 | INFO     | PanDA job id: 6841124676
[2025-10-13 08:03:59] 2025-10-13 12:02:26,012 | INFO     | task id: 46676269
[2025-10-13 08:03:59] 2025-10-13 12:02:26,012 | INFO     | errors: (none)
[2025-10-13 08:03:59] 2025-10-13 12:02:26,012 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:03:59] 2025-10-13 12:02:26,012 | INFO     | pilot state: finished 
[2025-10-13 08:03:59] 2025-10-13 12:02:26,012 | INFO     | transexitcode: 0
[2025-10-13 08:03:59] 2025-10-13 12:02:26,012 | INFO     | exeerrorcode: 0
[2025-10-13 08:03:59] 2025-10-13 12:02:26,012 | INFO     | exeerrordiag: 
[2025-10-13 08:03:59] 2025-10-13 12:02:26,012 | INFO     | exitcode: 0
[2025-10-13 08:03:59] 2025-10-13 12:02:26,012 | INFO     | exitmsg: OK
[2025-10-13 08:03:59] 2025-10-13 12:02:26,012 | INFO     | cpuconsumptiontime: 45509 s
[2025-10-13 08:03:59] 2025-10-13 12:02:26,012 | INFO     | nevents: 400
[2025-10-13 08:03:59] 2025-10-13 12:02:26,012 | INFO     | neventsw: 0
[2025-10-13 08:03:59] 2025-10-13 12:02:26,013 | INFO     | pid: 659292
[2025-10-13 08:03:59] 2025-10-13 12:02:26,013 | INFO     | pgrp: 659292
[2025-10-13 08:03:59] 2025-10-13 12:02:26,013 | INFO     | corecount: 10
[2025-10-13 08:03:59] 2025-10-13 12:02:26,013 | INFO     | event service: False
[2025-10-13 08:03:59] 2025-10-13 12:02:26,013 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348742, 3: 2348913, 4: 2348969, 15: 2348969, 27: 2349125, 37: 2349415, 38: 2349443, 28396: 2386328, 28400: 2395662, 28413: 2395
[2025-10-13 08:03:59] 2025-10-13 12:02:26,013 | INFO     | --------------------------------------------------
[2025-10-13 08:03:59] 2025-10-13 12:02:26,013 | INFO     | 
[2025-10-13 08:03:59] 2025-10-13 12:02:26,013 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-10-13 08:03:59] 2025-10-13 12:02:26,080 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:03:59] 2025-10-13 12:02:26,085 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:03:59] 2025-10-13 12:02:26,085 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:03:59] 2025-10-13 12:02:26,085 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:03:59] 2025-10-13 12:02:26,085 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:03:59] 2025-10-13 12:02:26,085 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:03:59] 2025-10-13 12:02:26,086 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:03:59] 2025-10-13 12:02:26,086 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:03:59] 2025-10-13 12:02:26,086 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:03:59] 2025-10-13 12:02:26,086 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:03:59] 2025-10-13 12:02:26,086 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:03:59] 2025-10-13 12:02:26,086 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:03:59] 2025-10-13 12:02:26,086 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:03:59] 2025-10-13 12:02:26,086 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:03:59] 2025-10-13 12:02:26,086 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:03:59] 2025-10-13 12:02:26,087 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:03:59] 2025-10-13 12:02:26,087 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:03:59] 2025-10-13 12:02:26,087 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:03:59] 2025-10-13 12:02:26,087 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:03:59] 2025-10-13 12:02:26,087 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:03:59] 2025-10-13 12:02:26,087 | INFO     | job 6841124676 has completed (purged errors)
[2025-10-13 08:03:59] 2025-10-13 12:02:26,088 | INFO     | overall cleanup function is called
[2025-10-13 08:03:59] 2025-10-13 12:02:27,109 | INFO     | --- collectZombieJob: --- 10, [659292]
[2025-10-13 08:03:59] 2025-10-13 12:02:27,109 | INFO     | zombie collector waiting for pid 659292
[2025-10-13 08:03:59] 2025-10-13 12:02:27,109 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:03:59] 2025-10-13 12:02:27,109 | INFO     | collected zombie processes
[2025-10-13 08:03:59] 2025-10-13 12:02:27,109 | INFO     | will attempt to kill all subprocesses of pid=659292
[2025-10-13 08:03:59] 2025-10-13 12:02:27,828 | INFO     | process IDs to be killed: [659292] (in reverse order)
[2025-10-13 08:03:59] 2025-10-13 12:02:28,076 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:03:59] 2025-10-13 12:02:28,076 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:03:59] 2025-10-13 12:02:28,109 | INFO     | did not find any defunct processes belonging to 659292
[2025-10-13 08:03:59] 2025-10-13 12:02:28,146 | INFO     | did not find any defunct processes belonging to 659292
[2025-10-13 08:03:59] 2025-10-13 12:02:28,146 | INFO     | ready for new job
[2025-10-13 08:03:59] 2025-10-13 12:02:28,147 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:03:59] 2025-10-13 12:02:28,151 | INFO     | ***************************************
[2025-10-13 08:03:59] 2025-10-13 12:02:28,151 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:03:59] 2025-10-13 12:02:28,151 | INFO     | ***************************************
[2025-10-13 08:03:59] 2025-10-13 12:02:28,151 | INFO     | 
[2025-10-13 08:03:59] 2025-10-13 12:02:28,180 | INFO     | architecture information:
[2025-10-13 08:03:59] 2025-10-13 12:02:28,185 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:03:59] 2025-10-13 12:02:28,237 | INFO     | cat /etc/os-release:
[2025-10-13 08:03:59] NAME="CentOS Linux"
[2025-10-13 08:03:59] VERSION="7 (Core)"
[2025-10-13 08:03:59] ID="centos"
[2025-10-13 08:03:59] ID_LIKE="rhel fedora"
[2025-10-13 08:03:59] VERSION_ID="7"
[2025-10-13 08:03:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:03:59] ANSI_COLOR="0;31"
[2025-10-13 08:03:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:03:59] HOME_URL="https://www.centos.org/"
[2025-10-13 08:03:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:03:59] 
[2025-10-13 08:03:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:03:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:03:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:03:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:03:59] 
[2025-10-13 08:03:59] 2025-10-13 12:02:28,237 | INFO     | ***************************************
[2025-10-13 08:03:59] 2025-10-13 12:02:28,741 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-10-13 08:03:59] 2025-10-13 12:02:28,803 | INFO     | sufficient remaining disk space (94633984000 B)
[2025-10-13 08:03:59] 2025-10-13 12:02:28,803 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:03:59] 2025-10-13 12:02:28,803 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:03:59] 2025-10-13 12:02:28,804 | INFO     | update_server=False
[2025-10-13 08:03:59] 2025-10-13 12:02:28,804 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:03:59] 2025-10-13 12:02:28,880 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:03:59] 2025-10-13 12:02:29,125 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:03:59] 2025-10-13 12:02:29,502 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:03:59] 2025-10-13 12:02:29,502 | INFO     | aborting loop
[2025-10-13 08:03:59] 2025-10-13 12:02:29,682 | INFO     | all payload control threads have been joined
[2025-10-13 08:03:59] 2025-10-13 12:02:29,762 | INFO     | all data control threads have been joined
[2025-10-13 08:03:59] 2025-10-13 12:02:29,811 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:03:59] 2025-10-13 12:02:29,837 | INFO     | all job control threads have been joined
[2025-10-13 08:03:59] 2025-10-13 12:02:29,975 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:03:59] 2025-10-13 12:02:30,115 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:03:59] 2025-10-13 12:02:30,304 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:03:59] 2025-10-13 12:02:30,373 | INFO     | [job] validate thread has finished
[2025-10-13 08:03:59] 2025-10-13 12:02:30,393 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:03:59] 2025-10-13 12:02:30,393 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:03:59] 2025-10-13 12:02:30,508 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:03:59] 2025-10-13 12:02:30,519 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:03:59] 2025-10-13 12:02:30,688 | INFO     | [payload] control thread has finished
[2025-10-13 08:03:59] 2025-10-13 12:02:30,768 | INFO     | [data] control thread has finished
[2025-10-13 08:03:59] 2025-10-13 12:02:30,843 | INFO     | [job] control thread has finished
[2025-10-13 08:03:59] 2025-10-13 12:02:30,976 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:03:59] 2025-10-13 12:02:31,030 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:03:59] 2025-10-13 12:02:31,134 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:03:59] 2025-10-13 12:02:32,036 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:03:59] 2025-10-13 12:02:32,889 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:03:59] 2025-10-13 12:02:58,887 | INFO     | PID=619642 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 08:03:59] 2025-10-13 12:02:58,888 | INFO     | .. there are 44 such processes running
[2025-10-13 08:03:59] 2025-10-13 12:02:58,888 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:03:59] 2025-10-13 12:02:58,888 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:03:59] 2025-10-13 12:02:58,888 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:03:59] 2025-10-13 12:03:28,739 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:03:59] 2025-10-13 12:03:29,886 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140687532484416)>', '<ExcThread(monitor, started 140686745659136)>']
[2025-10-13 08:03:59] 2025-10-13 12:03:30,083 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:03:59] 2025-10-13 12:03:30,083 | INFO     | [monitor] control thread has ended
[2025-10-13 08:03:59] 2025-10-13 12:03:34,913 | INFO     | all workflow threads have been joined
[2025-10-13 08:03:59] 2025-10-13 12:03:34,914 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:03:59] 2025-10-13 12:03:34,915 | INFO     | traces error code: 0
[2025-10-13 08:03:59] 2025-10-13 12:03:34,915 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:03:59] 2025-10-13 12:03:35,608 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:03:59] 2025-10-13 12:03:35,615 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:03:59] 2025-10-13 12:03:35,618 [wrapper] pilotpid: 619642
[2025-10-13 08:03:59] 2025-10-13 12:03:35,622 [wrapper] Pilot exit status: 0
[2025-10-13 08:03:59] 2025-10-13 12:03:35,666 [wrapper] pandaids: 6841124676
[2025-10-13 08:03:59] 2025-10-13 12:03:35,773 [wrapper] cleanup supervisor_pilot 2057910 619643
[2025-10-13 08:03:59] 2025-10-13 12:03:35,793 [wrapper] Test setup, not cleaning
[2025-10-13 08:03:59] 2025-10-13 12:03:35,808 [wrapper] apfmon messages muted
[2025-10-13 08:03:59] 2025-10-13 12:03:35,812 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:03:59] 2025-10-13 12:03:35,819 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:03:59]  *** Error codes and diagnostics ***
[2025-10-13 08:03:59]     "exeErrorCode": 0,
[2025-10-13 08:03:59]     "exeErrorDiag": "",
[2025-10-13 08:03:59]     "pilotErrorCode": 0,
[2025-10-13 08:03:59]     "pilotErrorDiag": "",
[2025-10-13 08:03:59]  *** Listing of results directory ***
[2025-10-13 08:03:59] total 412424
[2025-10-13 08:03:59] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 22:00 pilot3.tar.gz
[2025-10-13 08:03:59] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 22:05 queuedata.json
[2025-10-13 08:03:59] -rwx------. 1 boincer umatlas     36292 Oct 12 22:05 runpilot2-wrapper.sh
[2025-10-13 08:03:59] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:03:59] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:06 run_atlas
[2025-10-13 08:03:59] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:06 job.xml
[2025-10-13 08:03:59] -rw-r--r--. 2 boincer umatlas 219661171 Oct 13 00:06 EVNT.46676267._004377.pool.root.1
[2025-10-13 08:03:59] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:06 start_atlas.sh
[2025-10-13 08:03:59] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:06 shared
[2025-10-13 08:03:59] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 00:06 input.tar.gz
[2025-10-13 08:03:59] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:06 boinc_lockfile
[2025-10-13 08:03:59] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:06 pandaJob.out
[2025-10-13 08:03:59] -rw-------. 1 boincer umatlas    974373 Oct 13 00:07 agis_schedconf.cvmfs.json
[2025-10-13 08:03:59] drwx------. 5 boincer umatlas      4096 Oct 13 00:07 pilot3
[2025-10-13 08:03:59] -rw-r--r--. 1 boincer umatlas       530 Oct 13 08:01 boinc_task_state.xml
[2025-10-13 08:03:59] -rw-------. 1 boincer umatlas 190687923 Oct 13 08:01 HITS.46676269._094543.pool.root.1
[2025-10-13 08:03:59] -rw-------. 1 boincer umatlas      1044 Oct 13 08:02 memory_monitor_summary.json
[2025-10-13 08:03:59] -rw-------. 1 boincer umatlas        95 Oct 13 08:02 pilot_heartbeat.json
[2025-10-13 08:03:59] -rw-------. 1 boincer umatlas   1560580 Oct 13 08:02 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:03:59] -rw-------. 1 boincer umatlas    659463 Oct 13 08:02 log.46676269._094543.job.log.tgz.1
[2025-10-13 08:03:59] -rw-------. 1 boincer umatlas      7834 Oct 13 08:02 heartbeat.json
[2025-10-13 08:03:59] -rw-r--r--. 1 boincer umatlas      6864 Oct 13 08:03 init_data.xml
[2025-10-13 08:03:59] -rw-------. 1 boincer umatlas      4823 Oct 13 08:03 pilotlog.txt
[2025-10-13 08:03:59] -rw-------. 1 boincer umatlas   3376714 Oct 13 08:03 log.46676269._094543.job.log.1
[2025-10-13 08:03:59] -rw-------. 1 boincer umatlas       357 Oct 13 08:03 output.list
[2025-10-13 08:03:59] -rw-r--r--. 1 boincer umatlas       620 Oct 13 08:03 runtime_log
[2025-10-13 08:03:59] -rw-------. 1 boincer umatlas   4055040 Oct 13 08:03 result.tar.gz
[2025-10-13 08:03:59] -rw-r--r--. 1 boincer umatlas      8706 Oct 13 08:03 runtime_log.err
[2025-10-13 08:03:59] -rw-------. 1 boincer umatlas       656 Oct 13 08:03 pKGMDmi7MS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBSmNDmFTVTIo.diag
[2025-10-13 08:03:59] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 08:03 boinc_mmap_file
[2025-10-13 08:03:59] -rw-r--r--. 1 boincer umatlas        27 Oct 13 08:03 wrapper_checkpoint.txt
[2025-10-13 08:03:59] -rw-r--r--. 1 boincer umatlas     21061 Oct 13 08:03 stderr.txt
[2025-10-13 08:03:59] HITS file was successfully produced:
[2025-10-13 08:03:59] -rw-------. 1 boincer umatlas 190687923 Oct 13 08:01 shared/HITS.pool.root.1
[2025-10-13 08:03:59]  *** Contents of shared directory: ***
[2025-10-13 08:03:59] total 405276
[2025-10-13 08:03:59] -rw-r--r--. 2 boincer umatlas 219661171 Oct 13 00:06 ATLAS.root_0
[2025-10-13 08:03:59] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:06 start_atlas.sh
[2025-10-13 08:03:59] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 00:06 input.tar.gz
[2025-10-13 08:03:59] -rw-------. 1 boincer umatlas 190687923 Oct 13 08:01 HITS.pool.root.1
[2025-10-13 08:03:59] -rw-------. 1 boincer umatlas   4055040 Oct 13 08:03 result.tar.gz
08:04:01 (604320): run_atlas exited; CPU time 47142.620960
08:04:01 (604320): called boinc_finish(0)

</stderr_txt>
]]>

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