Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:19:40 (3844365): wrapper (7.7.26015): starting
09:19:40 (3844365): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 09:19:40] Arguments: --nthreads 12
[2025-10-13 09:19:40] Threads: 12
[2025-10-13 09:19:40] Checking for CVMFS
[2025-10-13 09:19:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 09:19:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 09:19:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 09:19:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 09:19:41] 2.13.2.0 1756961 95919 287380 151662 1 116 23236285 32935937 10852 16776704 0 106036494 99.692 86527639 29708 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 09:19:41] CVMFS is ok
[2025-10-13 09:19:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 09:19:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 09:19:41] Further information can be found at the LHC@home message board.
[2025-10-13 09:19:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 09:19:41] Checking for apptainer binary...
[2025-10-13 09:19:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 09:19:41] Running /usr/bin/apptainer --version
[2025-10-13 09:19:41] apptainer version 1.4.3-1.el9
[2025-10-13 09:19:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 09:19:41] c-5-5.aglt2.org
[2025-10-13 09:19:41] apptainer works
[2025-10-13 09:19:41] Set ATHENA_PROC_NUMBER=12
[2025-10-13 09:19:41] Set ATHENA_CORE_NUMBER=12
[2025-10-13 09:19:41] Starting ATLAS job with PandaID=6841124635
[2025-10-13 09:19:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 14:07:32]  *** The last 200 lines of the pilot log: ***
[2025-10-13 14:07:32] 2025-10-13 18:06:43,886 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 14:07:32] 2025-10-13 18:06:43,887 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 14:07:32] 2025-10-13 18:06:43,887 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 14:07:32] 2025-10-13 18:06:43,894 | INFO     | fitting pss+swap vs Time
[2025-10-13 14:07:32] 2025-10-13 18:06:43,894 | INFO     | sum of square deviations: 6953956022.624088
[2025-10-13 14:07:32] 2025-10-13 18:06:43,897 | INFO     | sum of deviations: -90988752392.56027
[2025-10-13 14:07:32] 2025-10-13 18:06:43,897 | INFO     | mean x: 1760370194.751773
[2025-10-13 14:07:32] 2025-10-13 18:06:43,897 | INFO     | mean y: 2482706.620567376
[2025-10-13 14:07:32] 2025-10-13 18:06:43,897 | INFO     | -- intersect: 23035974326.124695
[2025-10-13 14:07:32] 2025-10-13 18:06:43,898 | INFO     | intersect: 23035974326.124695
[2025-10-13 14:07:32] 2025-10-13 18:06:43,898 | INFO     | chi2: 2.7658121026077747
[2025-10-13 14:07:32] 2025-10-13 18:06:43,899 | INFO     | sum of square deviations: 6590698727.148003
[2025-10-13 14:07:32] 2025-10-13 18:06:43,901 | INFO     | sum of deviations: -69455520222.49818
[2025-10-13 14:07:32] 2025-10-13 18:06:43,901 | INFO     | mean x: 1760370042.2743683
[2025-10-13 14:07:32] 2025-10-13 18:06:43,901 | INFO     | mean y: 2491634.296028881
[2025-10-13 14:07:32] 2025-10-13 18:06:43,902 | INFO     | -- intersect: 18554002199.728325
[2025-10-13 14:07:32] 2025-10-13 18:06:43,902 | INFO     | intersect: 18554002199.728325
[2025-10-13 14:07:32] 2025-10-13 18:06:43,902 | INFO     | chi2: 1.9381688479100627
[2025-10-13 14:07:32] 2025-10-13 18:06:43,902 | INFO     | current chi2=1.9381688479100627 (change=29.92405933567793 %)
[2025-10-13 14:07:32] 2025-10-13 18:06:43,903 | INFO     | sum of square deviations: 6240291969.0551405
[2025-10-13 14:07:32] 2025-10-13 18:06:43,905 | INFO     | sum of deviations: -67527751517.18016
[2025-10-13 14:07:32] 2025-10-13 18:06:43,905 | INFO     | mean x: 1760369889.7904413
[2025-10-13 14:07:32] 2025-10-13 18:06:43,906 | INFO     | mean y: 2492469.0845588236
[2025-10-13 14:07:32] 2025-10-13 18:06:43,906 | INFO     | -- intersect: 19051892895.47098
[2025-10-13 14:07:32] 2025-10-13 18:06:43,906 | INFO     | intersect: 19051892895.47098
[2025-10-13 14:07:32] 2025-10-13 18:06:43,906 | INFO     | chi2: 1.9340430247196334
[2025-10-13 14:07:32] 2025-10-13 18:06:43,907 | INFO     | current chi2=1.9340430247196334 (change=0.21287222704452236 %)
[2025-10-13 14:07:32] 2025-10-13 18:06:43,907 | INFO     | right removable region: 271
[2025-10-13 14:07:32] 2025-10-13 18:06:43,907 | INFO     | sum of square deviations: 6590483397.148003
[2025-10-13 14:07:32] 2025-10-13 18:06:43,909 | INFO     | sum of deviations: -133246380792.11551
[2025-10-13 14:07:32] 2025-10-13 18:06:43,910 | INFO     | mean x: 1760370347.2743683
[2025-10-13 14:07:32] 2025-10-13 18:06:43,910 | INFO     | mean y: 2500310.0541516244
[2025-10-13 14:07:32] 2025-10-13 18:06:43,910 | INFO     | -- intersect: 35593664644.00498
[2025-10-13 14:07:32] 2025-10-13 18:06:43,910 | INFO     | intersect: 35593664644.00498
[2025-10-13 14:07:32] 2025-10-13 18:06:43,911 | INFO     | chi2: 1.3605747823508074
[2025-10-13 14:07:32] 2025-10-13 18:06:43,911 | INFO     | current chi2=1.3605747823508074 (change=50.8074036892103 %)
[2025-10-13 14:07:32] 2025-10-13 18:06:43,911 | INFO     | sum of square deviations: 6239894733.8786955
[2025-10-13 14:07:32] 2025-10-13 18:06:43,914 | INFO     | sum of deviations: -123255631048.79044
[2025-10-13 14:07:32] 2025-10-13 18:06:43,914 | INFO     | mean x: 1760370499.797794
[2025-10-13 14:07:32] 2025-10-13 18:06:43,914 | INFO     | mean y: 2495955.349264706
[2025-10-13 14:07:32] 2025-10-13 18:06:43,914 | INFO     | -- intersect: 34774809605.80415
[2025-10-13 14:07:32] 2025-10-13 18:06:43,914 | INFO     | intersect: 34774809605.80415
[2025-10-13 14:07:32] 2025-10-13 18:06:43,915 | INFO     | chi2: 1.3543208440434507
[2025-10-13 14:07:32] 2025-10-13 18:06:43,915 | INFO     | current chi2=1.3543208440434507 (change=0.45965413944768124 %)
[2025-10-13 14:07:32] 2025-10-13 18:06:43,915 | INFO     | left removable region: 20
[2025-10-13 14:07:32] 2025-10-13 18:06:43,916 | INFO     | sum of square deviations: 4903419780.007999
[2025-10-13 14:07:32] 2025-10-13 18:06:43,917 | INFO     | sum of deviations: -74249470128.52982
[2025-10-13 14:07:32] 2025-10-13 18:06:43,918 | INFO     | mean x: 1760370469.3625498
[2025-10-13 14:07:32] 2025-10-13 18:06:43,918 | INFO     | mean y: 2494639.390438247
[2025-10-13 14:07:32] 2025-10-13 18:06:43,918 | INFO     | -- intersect: 26658702030.197884
[2025-10-13 14:07:32] 2025-10-13 18:06:43,918 | INFO     | intersect: 26658702030.197884
[2025-10-13 14:07:32] 2025-10-13 18:06:43,919 | INFO     | chi2: 0.4525907429213018
[2025-10-13 14:07:32] 2025-10-13 18:06:43,919 | INFO     | -- intersect: 26658702030.197884
[2025-10-13 14:07:32] 2025-10-13 18:06:43,919 | INFO     | current memory leak: -15.14 B/s (using 251 data points, chi2=0.45)
[2025-10-13 14:07:32] 2025-10-13 18:06:43,920 | INFO     | could have reported an average CPU frequency of 2615 MHz (13 samples)
[2025-10-13 14:07:32] 2025-10-13 18:06:43,920 | INFO     | ..............................
[2025-10-13 14:07:32] 2025-10-13 18:06:43,920 | INFO     | . Timing measurements:
[2025-10-13 14:07:32] 2025-10-13 18:06:43,920 | INFO     | . get job = 0 s
[2025-10-13 14:07:32] 2025-10-13 18:06:43,920 | INFO     | . initial setup = 2 s
[2025-10-13 14:07:32] 2025-10-13 18:06:43,921 | INFO     | . payload setup = 7 s
[2025-10-13 14:07:32] 2025-10-13 18:06:43,921 | INFO     | . stage-in = 0 s
[2025-10-13 14:07:32] 2025-10-13 18:06:43,921 | INFO     | . payload execution = 17174 s
[2025-10-13 14:07:32] 2025-10-13 18:06:43,921 | INFO     | . stage-out = 2 s
[2025-10-13 14:07:32] 2025-10-13 18:06:43,921 | INFO     | . log creation = 0 s
[2025-10-13 14:07:32] 2025-10-13 18:06:43,921 | INFO     | ..............................
[2025-10-13 14:07:32] 2025-10-13 18:06:44,040 | INFO     | 
[2025-10-13 14:07:32] 2025-10-13 18:06:44,041 | INFO     | job summary report
[2025-10-13 14:07:32] 2025-10-13 18:06:44,041 | INFO     | --------------------------------------------------
[2025-10-13 14:07:32] 2025-10-13 18:06:44,041 | INFO     | PanDA job id: 6841124635
[2025-10-13 14:07:32] 2025-10-13 18:06:44,041 | INFO     | task id: 46676269
[2025-10-13 14:07:32] 2025-10-13 18:06:44,041 | INFO     | errors: (none)
[2025-10-13 14:07:32] 2025-10-13 18:06:44,041 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 14:07:32] 2025-10-13 18:06:44,041 | INFO     | pilot state: finished 
[2025-10-13 14:07:32] 2025-10-13 18:06:44,041 | INFO     | transexitcode: 0
[2025-10-13 14:07:32] 2025-10-13 18:06:44,041 | INFO     | exeerrorcode: 0
[2025-10-13 14:07:32] 2025-10-13 18:06:44,042 | INFO     | exeerrordiag: 
[2025-10-13 14:07:32] 2025-10-13 18:06:44,042 | INFO     | exitcode: 0
[2025-10-13 14:07:32] 2025-10-13 18:06:44,042 | INFO     | exitmsg: OK
[2025-10-13 14:07:32] 2025-10-13 18:06:44,042 | INFO     | cpuconsumptiontime: 50080 s
[2025-10-13 14:07:32] 2025-10-13 18:06:44,042 | INFO     | nevents: 400
[2025-10-13 14:07:32] 2025-10-13 18:06:44,042 | INFO     | neventsw: 0
[2025-10-13 14:07:32] 2025-10-13 18:06:44,042 | INFO     | pid: 3856268
[2025-10-13 14:07:32] 2025-10-13 18:06:44,042 | INFO     | pgrp: 3856268
[2025-10-13 14:07:32] 2025-10-13 18:06:44,042 | INFO     | corecount: 12
[2025-10-13 14:07:32] 2025-10-13 18:06:44,043 | INFO     | event service: False
[2025-10-13 14:07:32] 2025-10-13 18:06:44,043 | INFO     | sizes: {0: 2348686, 1: 2348885, 5: 2349147, 11: 2349203, 17185: 2380998, 17187: 2389996, 17189: 2390180, 17194: 2390374}
[2025-10-13 14:07:32] 2025-10-13 18:06:44,043 | INFO     | --------------------------------------------------
[2025-10-13 14:07:32] 2025-10-13 18:06:44,043 | INFO     | 
[2025-10-13 14:07:32] 2025-10-13 18:06:44,043 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 14:07:32] 2025-10-13 18:06:44,063 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 14:07:32] 2025-10-13 18:06:44,063 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 14:07:32] 2025-10-13 18:06:44,063 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 14:07:32] 2025-10-13 18:06:44,063 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 14:07:32] 2025-10-13 18:06:44,064 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 14:07:32] 2025-10-13 18:06:44,064 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 14:07:32] 2025-10-13 18:06:44,064 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 14:07:32] 2025-10-13 18:06:44,064 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 14:07:32] 2025-10-13 18:06:44,064 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 14:07:32] 2025-10-13 18:06:44,064 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 14:07:32] 2025-10-13 18:06:44,064 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 14:07:32] 2025-10-13 18:06:44,064 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 14:07:32] 2025-10-13 18:06:44,065 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 14:07:32] 2025-10-13 18:06:44,065 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 14:07:32] 2025-10-13 18:06:44,065 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 14:07:32] 2025-10-13 18:06:44,065 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 14:07:32] 2025-10-13 18:06:44,065 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 14:07:32] 2025-10-13 18:06:44,065 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 14:07:32] 2025-10-13 18:06:44,065 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 14:07:32] 2025-10-13 18:06:44,065 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 14:07:32] 2025-10-13 18:06:44,066 | INFO     | job 6841124635 has completed (purged errors)
[2025-10-13 14:07:32] 2025-10-13 18:06:44,066 | INFO     | overall cleanup function is called
[2025-10-13 14:07:32] 2025-10-13 18:06:45,075 | INFO     | --- collectZombieJob: --- 10, [3856268]
[2025-10-13 14:07:32] 2025-10-13 18:06:45,075 | INFO     | zombie collector waiting for pid 3856268
[2025-10-13 14:07:32] 2025-10-13 18:06:45,075 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 14:07:32] 2025-10-13 18:06:45,075 | INFO     | collected zombie processes
[2025-10-13 14:07:32] 2025-10-13 18:06:45,075 | INFO     | will attempt to kill all subprocesses of pid=3856268
[2025-10-13 14:07:32] 2025-10-13 18:06:45,390 | INFO     | process IDs to be killed: [3856268] (in reverse order)
[2025-10-13 14:07:32] 2025-10-13 18:06:45,485 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 14:07:32] 2025-10-13 18:06:45,486 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 14:07:32] 2025-10-13 18:06:45,502 | INFO     | did not find any defunct processes belonging to 3856268
[2025-10-13 14:07:32] 2025-10-13 18:06:45,518 | INFO     | did not find any defunct processes belonging to 3856268
[2025-10-13 14:07:32] 2025-10-13 18:06:45,519 | INFO     | ready for new job
[2025-10-13 14:07:32] 2025-10-13 18:06:45,519 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 14:07:32] 2025-10-13 18:06:45,523 | INFO     | ***************************************
[2025-10-13 14:07:32] 2025-10-13 18:06:45,524 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 14:07:32] 2025-10-13 18:06:45,524 | INFO     | ***************************************
[2025-10-13 14:07:32] 2025-10-13 18:06:45,524 | INFO     | 
[2025-10-13 14:07:32] 2025-10-13 18:06:45,539 | INFO     | architecture information:
[2025-10-13 14:07:32] 2025-10-13 18:06:45,539 | INFO     | executing command: cat /etc/os-release
[2025-10-13 14:07:32] 2025-10-13 18:06:45,558 | INFO     | cat /etc/os-release:
[2025-10-13 14:07:32] NAME="CentOS Linux"
[2025-10-13 14:07:32] VERSION="7 (Core)"
[2025-10-13 14:07:32] ID="centos"
[2025-10-13 14:07:32] ID_LIKE="rhel fedora"
[2025-10-13 14:07:32] VERSION_ID="7"
[2025-10-13 14:07:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 14:07:32] ANSI_COLOR="0;31"
[2025-10-13 14:07:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 14:07:32] HOME_URL="https://www.centos.org/"
[2025-10-13 14:07:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 14:07:32] 
[2025-10-13 14:07:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 14:07:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 14:07:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 14:07:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 14:07:32] 
[2025-10-13 14:07:32] 2025-10-13 18:06:45,558 | INFO     | ***************************************
[2025-10-13 14:07:32] 2025-10-13 18:06:46,061 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 14:07:32] 2025-10-13 18:06:46,081 | INFO     | sufficient remaining disk space (76541853696 B)
[2025-10-13 14:07:32] 2025-10-13 18:06:46,082 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 14:07:32] 2025-10-13 18:06:46,083 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 14:07:32] 2025-10-13 18:06:46,083 | INFO     | update_server=False
[2025-10-13 14:07:32] 2025-10-13 18:06:46,083 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 14:07:32] 2025-10-13 18:06:46,083 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 14:07:32] 2025-10-13 18:06:46,084 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 14:07:32] 2025-10-13 18:06:46,084 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:07:32] 2025-10-13 18:06:46,085 | INFO     | aborting loop
[2025-10-13 14:07:32] 2025-10-13 18:06:46,363 | INFO     | all payload control threads have been joined
[2025-10-13 14:07:32] 2025-10-13 18:06:47,088 | INFO     | [job] retrieve thread has finished
[2025-10-13 14:07:32] 2025-10-13 18:06:47,089 | INFO     | [job] job monitor thread has finished
[2025-10-13 14:07:32] 2025-10-13 18:06:47,125 | INFO     | all data control threads have been joined
[2025-10-13 14:07:32] 2025-10-13 18:06:47,369 | INFO     | [payload] control thread has finished
[2025-10-13 14:07:32] 2025-10-13 18:06:47,406 | INFO     | [payload] validate_post thread has finished
[2025-10-13 14:07:32] 2025-10-13 18:06:47,472 | INFO     | [job] validate thread has finished
[2025-10-13 14:07:32] 2025-10-13 18:06:47,517 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 14:07:32] 2025-10-13 18:06:47,679 | INFO     | all job control threads have been joined
[2025-10-13 14:07:32] 2025-10-13 18:06:47,888 | INFO     | [payload] failed_post thread has finished
[2025-10-13 14:07:32] 2025-10-13 18:06:48,066 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 14:07:32] 2025-10-13 18:06:48,090 | INFO     | [data] copytool_out thread has finished
[2025-10-13 14:07:32] 2025-10-13 18:06:48,131 | INFO     | [data] control thread has finished
[2025-10-13 14:07:32] 2025-10-13 18:06:48,313 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 14:07:32] 2025-10-13 18:06:48,448 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 14:07:32] 2025-10-13 18:06:48,522 | INFO     | [data] copytool_in thread has finished
[2025-10-13 14:07:32] 2025-10-13 18:06:48,685 | INFO     | [job] control thread has finished
[2025-10-13 14:07:32] 2025-10-13 18:06:49,052 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:07:32] 2025-10-13 18:06:50,057 | INFO     | [job] queue monitor thread has finished
[2025-10-13 14:07:32] 2025-10-13 18:06:50,090 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 14:07:32] 2025-10-13 18:07:16,122 | INFO     | PID=3848033 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 14:07:32] 2025-10-13 18:07:16,123 | INFO     | .. there are 16 such processes running
[2025-10-13 14:07:32] 2025-10-13 18:07:16,124 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 14:07:32] 2025-10-13 18:07:16,124 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 14:07:32] 2025-10-13 18:07:16,124 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 14:07:32] 2025-10-13 18:07:25,416 | INFO     | [monitor] cgroup control has ended
[2025-10-13 14:07:32] 2025-10-13 18:07:27,112 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140317087315776)>', '<ExcThread(monitor, started 140316380231424)>']
[2025-10-13 14:07:32] 2025-10-13 18:07:27,172 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 14:07:32] 2025-10-13 18:07:27,172 | INFO     | [monitor] control thread has ended
[2025-10-13 14:07:32] 2025-10-13 18:07:32,138 | INFO     | all workflow threads have been joined
[2025-10-13 14:07:32] 2025-10-13 18:07:32,138 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 14:07:32] 2025-10-13 18:07:32,139 | INFO     | traces error code: 0
[2025-10-13 14:07:32] 2025-10-13 18:07:32,139 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 14:07:32] 2025-10-13 18:07:32,338 [wrapper] ==== pilot stdout END ====
[2025-10-13 14:07:32] 2025-10-13 18:07:32,341 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 14:07:32] 2025-10-13 18:07:32,344 [wrapper] pilotpid: 3848033
[2025-10-13 14:07:32] 2025-10-13 18:07:32,347 [wrapper] Pilot exit status: 0
[2025-10-13 14:07:32] 2025-10-13 18:07:32,358 [wrapper] pandaids: 6841124635
[2025-10-13 14:07:32] 2025-10-13 18:07:32,416 [wrapper] cleanup supervisor_pilot  301491 3848034
[2025-10-13 14:07:32] 2025-10-13 18:07:32,420 [wrapper] Test setup, not cleaning
[2025-10-13 14:07:32] 2025-10-13 18:07:32,424 [wrapper] apfmon messages muted
[2025-10-13 14:07:32] 2025-10-13 18:07:32,427 [wrapper] ==== wrapper stdout END ====
[2025-10-13 14:07:32] 2025-10-13 18:07:32,430 [wrapper] ==== wrapper stderr END ====
[2025-10-13 14:07:32]  *** Error codes and diagnostics ***
[2025-10-13 14:07:32]     "exeErrorCode": 0,
[2025-10-13 14:07:32]     "exeErrorDiag": "",
[2025-10-13 14:07:32]     "pilotErrorCode": 0,
[2025-10-13 14:07:32]     "pilotErrorDiag": "",
[2025-10-13 14:07:32]  *** Listing of results directory ***
[2025-10-13 14:07:32] total 413056
[2025-10-13 14:07:32] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 22:00 pilot3.tar.gz
[2025-10-13 14:07:32] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 22:03 queuedata.json
[2025-10-13 14:07:32] -rwx------. 1 boincer umatlas     36292 Oct 12 22:04 runpilot2-wrapper.sh
[2025-10-13 14:07:32] -rw-r--r--. 1 boincer umatlas       100 Oct 13 09:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 14:07:32] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 09:19 run_atlas
[2025-10-13 14:07:32] -rw-r--r--. 1 boincer umatlas       105 Oct 13 09:19 job.xml
[2025-10-13 14:07:32] -rw-r--r--. 2 boincer umatlas 220355901 Oct 13 09:19 EVNT.46676267._004375.pool.root.1
[2025-10-13 14:07:32] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 09:19 start_atlas.sh
[2025-10-13 14:07:32] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 09:19 shared
[2025-10-13 14:07:32] -rw-r--r--. 2 boincer umatlas    569682 Oct 13 09:19 input.tar.gz
[2025-10-13 14:07:32] -rw-r--r--. 1 boincer umatlas         0 Oct 13 09:19 boinc_lockfile
[2025-10-13 14:07:32] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 09:19 pandaJob.out
[2025-10-13 14:07:32] -rw-------. 1 boincer umatlas    972489 Oct 13 09:19 agis_schedconf.cvmfs.json
[2025-10-13 14:07:32] drwx------. 5 boincer umatlas      4096 Oct 13 09:19 pilot3
[2025-10-13 14:07:32] -rw-r--r--. 1 boincer umatlas      6658 Oct 13 14:02 init_data.xml
[2025-10-13 14:07:32] -rw-------. 1 boincer umatlas 193347985 Oct 13 14:05 HITS.46676269._094502.pool.root.1
[2025-10-13 14:07:32] -rw-r--r--. 1 boincer umatlas       531 Oct 13 14:06 boinc_task_state.xml
[2025-10-13 14:07:32] -rw-------. 1 boincer umatlas      1041 Oct 13 14:06 memory_monitor_summary.json
[2025-10-13 14:07:32] -rw-------. 1 boincer umatlas   1560580 Oct 13 14:06 agis_ddmendpoints.agis.ALL.json
[2025-10-13 14:07:32] -rw-------. 1 boincer umatlas    557644 Oct 13 14:06 log.46676269._094502.job.log.tgz.1
[2025-10-13 14:07:32] -rw-------. 1 boincer umatlas      7820 Oct 13 14:06 heartbeat.json
[2025-10-13 14:07:32] -rw-------. 1 boincer umatlas        95 Oct 13 14:07 pilot_heartbeat.json
[2025-10-13 14:07:32] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 14:07 boinc_mmap_file
[2025-10-13 14:07:32] -rw-r--r--. 1 boincer umatlas        28 Oct 13 14:07 wrapper_checkpoint.txt
[2025-10-13 14:07:32] -rw-------. 1 boincer umatlas      4824 Oct 13 14:07 pilotlog.txt
[2025-10-13 14:07:32] -rw-------. 1 boincer umatlas   2122274 Oct 13 14:07 log.46676269._094502.job.log.1
[2025-10-13 14:07:32] -rw-------. 1 boincer umatlas       357 Oct 13 14:07 output.list
[2025-10-13 14:07:32] -rw-r--r--. 1 boincer umatlas       620 Oct 13 14:07 runtime_log
[2025-10-13 14:07:32] -rw-------. 1 boincer umatlas   2703360 Oct 13 14:07 result.tar.gz
[2025-10-13 14:07:32] -rw-r--r--. 1 boincer umatlas      8691 Oct 13 14:07 runtime_log.err
[2025-10-13 14:07:32] -rw-------. 1 boincer umatlas       655 Oct 13 14:07 k5KODmj6MS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmcRmNDm6rq7an.diag
[2025-10-13 14:07:32] -rw-r--r--. 1 boincer umatlas     20989 Oct 13 14:07 stderr.txt
[2025-10-13 14:07:32] HITS file was successfully produced:
[2025-10-13 14:07:32] -rw-------. 1 boincer umatlas 193347985 Oct 13 14:05 shared/HITS.pool.root.1
[2025-10-13 14:07:32]  *** Contents of shared directory: ***
[2025-10-13 14:07:32] total 407232
[2025-10-13 14:07:32] -rw-r--r--. 2 boincer umatlas 220355901 Oct 13 09:19 ATLAS.root_0
[2025-10-13 14:07:32] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 09:19 start_atlas.sh
[2025-10-13 14:07:32] -rw-r--r--. 2 boincer umatlas    569682 Oct 13 09:19 input.tar.gz
[2025-10-13 14:07:32] -rw-------. 1 boincer umatlas 193347985 Oct 13 14:05 HITS.pool.root.1
[2025-10-13 14:07:32] -rw-------. 1 boincer umatlas   2703360 Oct 13 14:07 result.tar.gz
14:07:34 (3844365): run_atlas exited; CPU time 50475.900288
14:07:34 (3844365): called boinc_finish(0)

</stderr_txt>
]]>

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