Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:52:52 (854279): wrapper (7.7.26015): starting
16:52:52 (854279): wrapper: running run_atlas (--nthreads 4)
[2025-10-14 16:52:52] Arguments: --nthreads 4
[2025-10-14 16:52:52] Threads: 4
[2025-10-14 16:52:52] Checking for CVMFS
[2025-10-14 16:52:52] No cvmfs_config command found, will try listing directly
[2025-10-14 16:52:52] CVMFS is ok
[2025-10-14 16:52:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 16:52:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 16:52:52] Further information can be found at the LHC@home message board.
[2025-10-14 16:52:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 16:52:52] Checking for apptainer binary...
[2025-10-14 16:52:52] which: no apptainer in ((null))
[2025-10-14 16:52:52] apptainer is not installed, using version from CVMFS
[2025-10-14 16:52:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 16:52:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-10-14 16:52:52] apptainer works
[2025-10-14 16:52:52] Set ATHENA_PROC_NUMBER=4
[2025-10-14 16:52:52] Set ATHENA_CORE_NUMBER=4
[2025-10-14 16:52:52] Starting ATLAS job with PandaID=6840969716
[2025-10-14 16:52:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 19:23:53]  *** The last 200 lines of the pilot log: ***
[2025-10-14 19:23:53] 2025-10-14 17:19:04,633 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 19:23:53] 2025-10-14 17:19:04,652 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2727.1391484375004
[2025-10-14 19:23:53] 2025-10-14 17:19:04,675 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6840969716/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 19:23:53] 2025-10-14 17:19:04,675 | INFO     | extracted standard info from prmon json
[2025-10-14 19:23:53] 2025-10-14 17:19:04,676 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 19:23:53] 2025-10-14 17:19:04,676 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 19:23:53] 2025-10-14 17:19:04,676 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 19:23:53] 2025-10-14 17:19:04,676 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 19:23:53] 2025-10-14 17:19:04,679 | INFO     | fitting pss+swap vs Time
[2025-10-14 19:23:53] 2025-10-14 17:19:04,679 | INFO     | sum of square deviations: 906703512.0
[2025-10-14 19:23:53] 2025-10-14 17:19:04,680 | INFO     | sum of deviations: 14895165134.999998
[2025-10-14 19:23:53] 2025-10-14 17:19:04,680 | INFO     | mean x: 1760457952.0
[2025-10-14 19:23:53] 2025-10-14 17:19:04,680 | INFO     | mean y: 2312331.314685315
[2025-10-14 19:23:53] 2025-10-14 17:19:04,680 | INFO     | -- intersect: -28918179936.795002
[2025-10-14 19:23:53] 2025-10-14 17:19:04,680 | INFO     | intersect: -28918179936.795002
[2025-10-14 19:23:53] 2025-10-14 17:19:04,680 | INFO     | chi2: 1.3236531356851953
[2025-10-14 19:23:53] 2025-10-14 17:19:04,681 | INFO     | sum of square deviations: 814878534.5
[2025-10-14 19:23:53] 2025-10-14 17:19:04,681 | INFO     | sum of deviations: 14297403778.5
[2025-10-14 19:23:53] 2025-10-14 17:19:04,681 | INFO     | mean x: 1760457799.5
[2025-10-14 19:23:53] 2025-10-14 17:19:04,681 | INFO     | mean y: 2311339.224637681
[2025-10-14 19:23:53] 2025-10-14 17:19:04,682 | INFO     | -- intersect: -30885698258.31017
[2025-10-14 19:23:53] 2025-10-14 17:19:04,682 | INFO     | intersect: -30885698258.31017
[2025-10-14 19:23:53] 2025-10-14 17:19:04,682 | INFO     | chi2: 1.3251846939520626
[2025-10-14 19:23:53] 2025-10-14 17:19:04,682 | INFO     | current chi2=1.3251846939520626 (change=-0.11570691940185159 %)
[2025-10-14 19:23:53] 2025-10-14 17:19:04,682 | INFO     | right removable region: 137
[2025-10-14 19:23:53] 2025-10-14 17:19:04,682 | INFO     | sum of square deviations: 814878534.5
[2025-10-14 19:23:53] 2025-10-14 17:19:04,683 | INFO     | sum of deviations: -2646378463.4999995
[2025-10-14 19:23:53] 2025-10-14 17:19:04,683 | INFO     | mean x: 1760458104.5
[2025-10-14 19:23:53] 2025-10-14 17:19:04,683 | INFO     | mean y: 2340917.224637681
[2025-10-14 19:23:53] 2025-10-14 17:19:04,683 | INFO     | -- intersect: 5719559148.407327
[2025-10-14 19:23:53] 2025-10-14 17:19:04,683 | INFO     | intersect: 5719559148.407327
[2025-10-14 19:23:53] 2025-10-14 17:19:04,683 | INFO     | chi2: 0.010610187244055129
[2025-10-14 19:23:53] 2025-10-14 17:19:04,683 | INFO     | current chi2=0.010610187244055129 (change=99.19841634050428 %)
[2025-10-14 19:23:53] 2025-10-14 17:19:04,684 | INFO     | sum of square deviations: 729472282.0
[2025-10-14 19:23:53] 2025-10-14 17:19:04,684 | INFO     | sum of deviations: -1856239271.9999998
[2025-10-14 19:23:53] 2025-10-14 17:19:04,684 | INFO     | mean x: 1760458257.0
[2025-10-14 19:23:53] 2025-10-14 17:19:04,685 | INFO     | mean y: 2339493.4210526315
[2025-10-14 19:23:53] 2025-10-14 17:19:04,685 | INFO     | -- intersect: 4482059743.244155
[2025-10-14 19:23:53] 2025-10-14 17:19:04,685 | INFO     | intersect: 4482059743.244155
[2025-10-14 19:23:53] 2025-10-14 17:19:04,685 | INFO     | chi2: 0.009742925582482638
[2025-10-14 19:23:53] 2025-10-14 17:19:04,685 | INFO     | current chi2=0.009742925582482638 (change=8.173858214033084 %)
[2025-10-14 19:23:53] 2025-10-14 17:19:04,685 | INFO     | left removable region: 20
[2025-10-14 19:23:53] 2025-10-14 17:19:04,685 | INFO     | sum of square deviations: 496597218.0
[2025-10-14 19:23:53] 2025-10-14 17:19:04,686 | INFO     | sum of deviations: 829671492.0
[2025-10-14 19:23:53] 2025-10-14 17:19:04,686 | INFO     | mean x: 1760458379.0
[2025-10-14 19:23:53] 2025-10-14 17:19:04,686 | INFO     | mean y: 2333534.094017094
[2025-10-14 19:23:53] 2025-10-14 17:19:04,686 | INFO     | -- intersect: -2938887392.980994
[2025-10-14 19:23:53] 2025-10-14 17:19:04,686 | INFO     | intersect: -2938887392.980994
[2025-10-14 19:23:53] 2025-10-14 17:19:04,686 | INFO     | chi2: 0.0006912675730651336
[2025-10-14 19:23:53] 2025-10-14 17:19:04,686 | INFO     | -- intersect: -2938887392.980994
[2025-10-14 19:23:53] 2025-10-14 17:19:04,686 | INFO     | current memory leak: 1.67 B/s (using 117 data points, chi2=0.00)
[2025-10-14 19:23:53] 2025-10-14 17:19:04,687 | INFO     | could have reported an average CPU frequency of 2709 MHz (8 samples)
[2025-10-14 19:23:53] 2025-10-14 17:19:04,687 | INFO     | ..............................
[2025-10-14 19:23:53] 2025-10-14 17:19:04,687 | INFO     | . Timing measurements:
[2025-10-14 19:23:53] 2025-10-14 17:19:04,687 | INFO     | . get job = 0 s
[2025-10-14 19:23:53] 2025-10-14 17:19:04,687 | INFO     | . initial setup = 1 s
[2025-10-14 19:23:53] 2025-10-14 17:19:04,687 | INFO     | . payload setup = 8 s
[2025-10-14 19:23:53] 2025-10-14 17:19:04,687 | INFO     | . stage-in = 0 s
[2025-10-14 19:23:53] 2025-10-14 17:19:04,687 | INFO     | . payload execution = 8716 s
[2025-10-14 19:23:53] 2025-10-14 17:19:04,687 | INFO     | . stage-out = 0 s
[2025-10-14 19:23:53] 2025-10-14 17:19:04,687 | INFO     | . log creation = 0 s
[2025-10-14 19:23:53] 2025-10-14 17:19:04,688 | INFO     | ..............................
[2025-10-14 19:23:53] 2025-10-14 17:19:04,777 | INFO     | 
[2025-10-14 19:23:53] 2025-10-14 17:19:04,777 | INFO     | job summary report
[2025-10-14 19:23:53] 2025-10-14 17:19:04,777 | INFO     | --------------------------------------------------
[2025-10-14 19:23:53] 2025-10-14 17:19:04,777 | INFO     | PanDA job id: 6840969716
[2025-10-14 19:23:53] 2025-10-14 17:19:04,777 | INFO     | task id: 46676269
[2025-10-14 19:23:53] 2025-10-14 17:19:04,777 | INFO     | errors: (none)
[2025-10-14 19:23:53] 2025-10-14 17:19:04,777 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 19:23:53] 2025-10-14 17:19:04,777 | INFO     | pilot state: finished 
[2025-10-14 19:23:53] 2025-10-14 17:19:04,777 | INFO     | transexitcode: 0
[2025-10-14 19:23:53] 2025-10-14 17:19:04,778 | INFO     | exeerrorcode: 0
[2025-10-14 19:23:53] 2025-10-14 17:19:04,778 | INFO     | exeerrordiag: 
[2025-10-14 19:23:53] 2025-10-14 17:19:04,778 | INFO     | exitcode: 0
[2025-10-14 19:23:53] 2025-10-14 17:19:04,778 | INFO     | exitmsg: OK
[2025-10-14 19:23:53] 2025-10-14 17:19:04,778 | INFO     | cpuconsumptiontime: 33266 s
[2025-10-14 19:23:53] 2025-10-14 17:19:04,778 | INFO     | nevents: 400
[2025-10-14 19:23:53] 2025-10-14 17:19:04,778 | INFO     | neventsw: 0
[2025-10-14 19:23:53] 2025-10-14 17:19:04,778 | INFO     | pid: 865736
[2025-10-14 19:23:53] 2025-10-14 17:19:04,778 | INFO     | pgrp: 865736
[2025-10-14 19:23:53] 2025-10-14 17:19:04,778 | INFO     | corecount: 4
[2025-10-14 19:23:53] 2025-10-14 17:19:04,778 | INFO     | event service: False
[2025-10-14 19:23:53] 2025-10-14 17:19:04,778 | INFO     | sizes: {0: 2348093, 1: 2348961, 8: 2349223, 12: 2349251, 8728: 2377698, 8730: 2386720, 8731: 2386904, 8740: 2387098}
[2025-10-14 19:23:53] 2025-10-14 17:19:04,778 | INFO     | --------------------------------------------------
[2025-10-14 19:23:53] 2025-10-14 17:19:04,778 | INFO     | 
[2025-10-14 19:23:53] 2025-10-14 17:19:04,779 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2025-10-14 19:23:53] 2025-10-14 17:19:04,810 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 19:23:53] 2025-10-14 17:19:04,810 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 19:23:53] 2025-10-14 17:19:04,810 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 19:23:53] 2025-10-14 17:19:04,810 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 19:23:53] 2025-10-14 17:19:04,810 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 19:23:53] 2025-10-14 17:19:04,810 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 19:23:53] 2025-10-14 17:19:04,811 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 19:23:53] 2025-10-14 17:19:04,811 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 19:23:53] 2025-10-14 17:19:04,811 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 19:23:53] 2025-10-14 17:19:04,811 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 19:23:53] 2025-10-14 17:19:04,811 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 19:23:53] 2025-10-14 17:19:04,811 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 19:23:53] 2025-10-14 17:19:04,811 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 19:23:53] 2025-10-14 17:19:04,811 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 19:23:53] 2025-10-14 17:19:04,811 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 19:23:53] 2025-10-14 17:19:04,811 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 19:23:53] 2025-10-14 17:19:04,811 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 19:23:53] 2025-10-14 17:19:04,812 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 19:23:53] 2025-10-14 17:19:04,812 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 19:23:53] 2025-10-14 17:19:04,812 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 19:23:53] 2025-10-14 17:19:04,812 | INFO     | job 6840969716 has completed (purged errors)
[2025-10-14 19:23:53] 2025-10-14 17:19:04,812 | INFO     | overall cleanup function is called
[2025-10-14 19:23:53] 2025-10-14 17:19:05,821 | INFO     | --- collectZombieJob: --- 10, [865736]
[2025-10-14 19:23:53] 2025-10-14 17:19:05,821 | INFO     | zombie collector waiting for pid 865736
[2025-10-14 19:23:53] 2025-10-14 17:19:05,821 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 19:23:53] 2025-10-14 17:19:05,821 | INFO     | collected zombie processes
[2025-10-14 19:23:53] 2025-10-14 17:19:05,821 | INFO     | will attempt to kill all subprocesses of pid=865736
[2025-10-14 19:23:53] 2025-10-14 17:19:06,576 | INFO     | process IDs to be killed: [865736] (in reverse order)
[2025-10-14 19:23:53] 2025-10-14 17:19:06,818 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 19:23:53] 2025-10-14 17:19:06,818 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 19:23:53] 2025-10-14 17:19:06,849 | INFO     | did not find any defunct processes belonging to 865736
[2025-10-14 19:23:53] 2025-10-14 17:19:06,880 | INFO     | did not find any defunct processes belonging to 865736
[2025-10-14 19:23:53] 2025-10-14 17:19:06,881 | INFO     | ready for new job
[2025-10-14 19:23:53] 2025-10-14 17:19:06,881 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 19:23:53] 2025-10-14 17:19:06,883 | INFO     | ***************************************
[2025-10-14 19:23:53] 2025-10-14 17:19:06,883 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 19:23:53] 2025-10-14 17:19:06,883 | INFO     | ***************************************
[2025-10-14 19:23:53] 2025-10-14 17:19:06,883 | INFO     | 
[2025-10-14 19:23:53] 2025-10-14 17:19:06,892 | INFO     | architecture information:
[2025-10-14 19:23:53] 2025-10-14 17:19:06,892 | INFO     | executing command: cat /etc/os-release
[2025-10-14 19:23:53] 2025-10-14 17:19:06,919 | INFO     | cat /etc/os-release:
[2025-10-14 19:23:53] NAME="CentOS Linux"
[2025-10-14 19:23:53] VERSION="7 (Core)"
[2025-10-14 19:23:53] ID="centos"
[2025-10-14 19:23:53] ID_LIKE="rhel fedora"
[2025-10-14 19:23:53] VERSION_ID="7"
[2025-10-14 19:23:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 19:23:53] ANSI_COLOR="0;31"
[2025-10-14 19:23:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 19:23:53] HOME_URL="https://www.centos.org/"
[2025-10-14 19:23:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 19:23:53] 
[2025-10-14 19:23:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 19:23:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 19:23:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 19:23:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 19:23:53] 
[2025-10-14 19:23:53] 2025-10-14 17:19:06,922 | INFO     | ***************************************
[2025-10-14 19:23:53] 2025-10-14 17:19:07,426 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2025-10-14 19:23:53] 2025-10-14 17:19:07,450 | INFO     | sufficient remaining disk space (3326608408576 B)
[2025-10-14 19:23:53] 2025-10-14 17:19:07,450 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 19:23:53] 2025-10-14 17:19:07,451 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 19:23:53] 2025-10-14 17:19:07,451 | INFO     | update_server=False
[2025-10-14 19:23:53] 2025-10-14 17:19:07,451 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 19:23:53] 2025-10-14 17:19:07,451 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 19:23:53] 2025-10-14 17:19:07,674 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-14 19:23:53] 2025-10-14 17:19:07,674 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-14 19:23:53] 2025-10-14 17:19:07,674 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 19:23:53] 2025-10-14 17:19:07,675 | INFO     | will abort loop
[2025-10-14 19:23:53] 2025-10-14 17:19:08,005 | INFO     | all payload control threads have been joined
[2025-10-14 19:23:53] 2025-10-14 17:19:08,294 | INFO     | all data control threads have been joined
[2025-10-14 19:23:53] 2025-10-14 17:19:08,301 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 19:23:53] 2025-10-14 17:19:08,456 | INFO     | [job] retrieve thread has finished
[2025-10-14 19:23:53] 2025-10-14 17:19:08,465 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 19:23:53] 2025-10-14 17:19:08,641 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 19:23:53] 2025-10-14 17:19:08,651 | INFO     | [payload] validate_post thread has finished
[2025-10-14 19:23:53] 2025-10-14 17:19:08,680 | INFO     | [job] job monitor thread has finished
[2025-10-14 19:23:53] 2025-10-14 17:19:08,841 | INFO     | all job control threads have been joined
[2025-10-14 19:23:53] 2025-10-14 17:19:08,987 | INFO     | [payload] failed_post thread has finished
[2025-10-14 19:23:53] 2025-10-14 17:19:09,010 | INFO     | [payload] control thread has finished
[2025-10-14 19:23:53] 2025-10-14 17:19:09,156 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 19:23:53] 2025-10-14 17:19:09,299 | INFO     | [data] control thread has finished
[2025-10-14 19:23:53] 2025-10-14 17:19:09,351 | INFO     | [data] copytool_in thread has finished
[2025-10-14 19:23:53] 2025-10-14 17:19:09,628 | INFO     | [job] validate thread has finished
[2025-10-14 19:23:53] 2025-10-14 17:19:09,749 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 19:23:53] 2025-10-14 17:19:09,784 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 19:23:53] 2025-10-14 17:19:09,847 | INFO     | [job] control thread has finished
[2025-10-14 19:23:53] 2025-10-14 17:19:10,306 | INFO     | [data] copytool_out thread has finished
[2025-10-14 19:23:53] 2025-10-14 17:19:10,790 | INFO     | [job] queue monitor thread has finished
[2025-10-14 19:23:53] 2025-10-14 17:19:11,457 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 19:23:53] 2025-10-14 17:19:20,103 | INFO     | [monitor] cgroup control has ended
[2025-10-14 19:23:53] 2025-10-14 17:19:21,432 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22957722007360)>', '<ExcThread(monitor, started 22957480961792)>']
[2025-10-14 19:23:53] 2025-10-14 17:19:26,447 | INFO     | all workflow threads have been joined
[2025-10-14 19:23:53] 2025-10-14 17:19:26,448 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 19:23:53] 2025-10-14 17:19:26,448 | INFO     | traces error code: 0
[2025-10-14 19:23:53] 2025-10-14 17:19:26,448 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 19:23:53] 2025-10-14 17:19:37,251 | INFO     | PID=858349 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-14 19:23:53] 2025-10-14 17:19:37,252 | INFO     | .. there are 6 such processes running
[2025-10-14 19:23:53] 2025-10-14 17:19:37,253 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 19:23:53] 2025-10-14 17:19:37,253 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 19:23:53] 2025-10-14 17:19:37,253 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 19:23:53] 2025-10-14 17:19:37,253 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 19:23:53] 2025-10-14 17:19:37,253 | CRITICAL | thread 'MainThread' is not alive
[2025-10-14 19:23:53] 2025-10-14 17:19:37,253 | INFO     | [monitor] control thread has ended
[2025-10-14 19:23:53] 2025-10-14 17:19:37,463 [wrapper] ==== pilot stdout END ====
[2025-10-14 19:23:53] 2025-10-14 17:19:37,467 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 19:23:53] 2025-10-14 17:19:37,474 [wrapper] pilotpid: 858349
[2025-10-14 19:23:53] 2025-10-14 17:19:37,479 [wrapper] Pilot exit status: 0
[2025-10-14 19:23:53] 2025-10-14 17:19:37,493 [wrapper] pandaids: 6840969716
[2025-10-14 19:23:53] 2025-10-14 17:19:37,667 [wrapper] cleanup supervisor_pilot 1166062 858350
[2025-10-14 19:23:53] 2025-10-14 17:19:37,671 [wrapper] Test setup, not cleaning
[2025-10-14 19:23:53] 2025-10-14 17:19:37,674 [wrapper] apfmon messages muted
[2025-10-14 19:23:53] 2025-10-14 17:19:37,678 [wrapper] ==== wrapper stdout END ====
[2025-10-14 19:23:53] 2025-10-14 17:19:37,681 [wrapper] ==== wrapper stderr END ====
[2025-10-14 19:23:53]  *** Error codes and diagnostics ***
[2025-10-14 19:23:53]     "exeErrorCode": 0,
[2025-10-14 19:23:53]     "exeErrorDiag": "",
[2025-10-14 19:23:53]     "pilotErrorCode": 0,
[2025-10-14 19:23:53]     "pilotErrorDiag": "",
[2025-10-14 19:23:53]  *** Listing of results directory ***
[2025-10-14 19:23:53] total 409652
[2025-10-14 19:23:53] -rw-r--r-- 1 boinc boinc    557409 Oct 13 01:11 pilot3.tar.gz
[2025-10-14 19:23:53] -rwx------ 1 boinc boinc     36292 Oct 13 01:43 runpilot2-wrapper.sh
[2025-10-14 19:23:53] -rw-r--r-- 1 boinc boinc      5112 Oct 13 01:43 queuedata.json
[2025-10-14 19:23:53] -rw-r--r-- 1 boinc boinc       100 Oct 14 16:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 19:23:53] -rwxr-xr-x 1 boinc boinc      7986 Oct 14 16:52 run_atlas
[2025-10-14 19:23:53] -rw-r--r-- 1 boinc boinc       105 Oct 14 16:52 job.xml
[2025-10-14 19:23:53] -rw-r--r-- 1 boinc boinc      6688 Oct 14 16:52 init_data.xml
[2025-10-14 19:23:53] -rw-r--r-- 2 boinc boinc 222468087 Oct 14 16:52 EVNT.46676267._004665.pool.root.1
[2025-10-14 19:23:53] -rw-r--r-- 2 boinc boinc    569678 Oct 14 16:52 input.tar.gz
[2025-10-14 19:23:53] -rw-r--r-- 2 boinc boinc     15120 Oct 14 16:52 start_atlas.sh
[2025-10-14 19:23:53] drwxrwx--x 2 boinc boinc      4096 Oct 14 16:52 shared
[2025-10-14 19:23:53] -rw-r--r-- 1 boinc boinc         0 Oct 14 16:52 boinc_lockfile
[2025-10-14 19:23:53] -rw-r--r-- 1 boinc boinc      2550 Oct 14 16:52 pandaJob.out
[2025-10-14 19:23:53] -rw------- 1 boinc boinc    973966 Oct 14 16:53 agis_schedconf.cvmfs.json
[2025-10-14 19:23:53] -rw------- 1 boinc boinc   1560740 Oct 14 16:53 agis_ddmendpoints.agis.ALL.json
[2025-10-14 19:23:53] drwx------ 5 boinc boinc      4096 Oct 14 16:53 pilot3
[2025-10-14 19:23:53] -rw------- 1 boinc boinc 190018162 Oct 14 19:18 HITS.46676269._092400.pool.root.1
[2025-10-14 19:23:53] -rw-r--r-- 1 boinc boinc       528 Oct 14 19:18 boinc_task_state.xml
[2025-10-14 19:23:53] -rw------- 1 boinc boinc      1027 Oct 14 19:18 memory_monitor_summary.json
[2025-10-14 19:23:53] -rw------- 1 boinc boinc    316194 Oct 14 19:18 log.46676269._092400.job.log.tgz.1
[2025-10-14 19:23:53] -rw------- 1 boinc boinc      7785 Oct 14 19:19 heartbeat.json
[2025-10-14 19:23:53] -rw------- 1 boinc boinc        95 Oct 14 19:19 pilot_heartbeat.json
[2025-10-14 19:23:53] -rw------- 1 boinc boinc       891 Oct 14 19:19 pilotlog.txt
[2025-10-14 19:23:53] -rw------- 1 boinc boinc   1232179 Oct 14 19:19 log.46676269._092400.job.log.1
[2025-10-14 19:23:53] -rw------- 1 boinc boinc       357 Oct 14 19:19 output.list
[2025-10-14 19:23:53] -rw-r--r-- 1 boinc boinc       620 Oct 14 19:19 runtime_log
[2025-10-14 19:23:53] -rw------- 1 boinc boinc   1566720 Oct 14 19:19 result.tar.gz
[2025-10-14 19:23:53] -rw-r--r-- 1 boinc boinc      9084 Oct 14 19:19 runtime_log.err
[2025-10-14 19:23:53] -rw------- 1 boinc boinc       662 Oct 14 19:19 6OcKDmutKS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmzIVMDm2494dn.diag
[2025-10-14 19:23:53] -rw-r--r-- 1 boinc boinc        26 Oct 14 19:23 wrapper_checkpoint.txt
[2025-10-14 19:23:53] -rw-r--r-- 1 boinc boinc      8192 Oct 14 19:23 boinc_mmap_file
[2025-10-14 19:23:53] -rw-r--r-- 1 boinc boinc     20862 Oct 14 19:23 stderr.txt
[2025-10-14 19:23:53] HITS file was successfully produced:
[2025-10-14 19:23:53] -rw------- 1 boinc boinc 190018162 Oct 14 19:18 shared/HITS.pool.root.1
[2025-10-14 19:23:53]  *** Contents of shared directory: ***
[2025-10-14 19:23:53] total 404940
[2025-10-14 19:23:53] -rw-r--r-- 2 boinc boinc 222468087 Oct 14 16:52 ATLAS.root_0
[2025-10-14 19:23:53] -rw-r--r-- 2 boinc boinc    569678 Oct 14 16:52 input.tar.gz
[2025-10-14 19:23:53] -rw-r--r-- 2 boinc boinc     15120 Oct 14 16:52 start_atlas.sh
[2025-10-14 19:23:53] -rw------- 1 boinc boinc 190018162 Oct 14 19:18 HITS.pool.root.1
[2025-10-14 19:23:53] -rw------- 1 boinc boinc   1566720 Oct 14 19:19 result.tar.gz
19:23:54 (854279): run_atlas exited; CPU time 33841.240056
19:23:54 (854279): called boinc_finish(0)

</stderr_txt>
]]>

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