Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:33:12 (2777821): wrapper (7.7.26015): starting
03:33:12 (2777821): wrapper: running run_atlas (--nthreads 10)
[2025-10-13 03:33:12] Arguments: --nthreads 10
[2025-10-13 03:33:12] Threads: 10
[2025-10-13 03:33:12] Checking for CVMFS
[2025-10-13 03:33:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:33:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:33:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:33:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:33:34] 2.13.2.0 314321 113701 295084 151653 2 331 40472526 40960001 14818 16776704 1 155156760 99.756 98876408 40271 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 03:33:34] CVMFS is ok
[2025-10-13 03:33:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 03:33:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 03:33:34] Further information can be found at the LHC@home message board.
[2025-10-13 03:33:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:33:34] Checking for apptainer binary...
[2025-10-13 03:33:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 03:33:34] Running /usr/bin/apptainer --version
[2025-10-13 03:33:34] apptainer version 1.4.3-1.el9
[2025-10-13 03:33:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:33:35] c-206-37.aglt2.org
[2025-10-13 03:33:35] apptainer works
[2025-10-13 03:33:35] Set ATHENA_PROC_NUMBER=10
[2025-10-13 03:33:35] Set ATHENA_CORE_NUMBER=10
[2025-10-13 03:33:35] Starting ATLAS job with PandaID=6840969462
[2025-10-13 03:33:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
04:50:03 (2935960): wrapper (7.7.26015): starting
04:50:03 (2935960): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 04:50:03] Arguments: --nthreads 9
[2025-10-13 04:50:03] Threads: 9
[2025-10-13 04:50:03] This job has been restarted, cleaning up previous attempt
[2025-10-13 04:50:03] Checking for CVMFS
[2025-10-13 04:50:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:50:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:50:03] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:50:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:50:03] 2.13.2.0 314321 113778 285352 151654 2 29 40544073 40960001 11355 16776704 1 155350429 99.756 98877712 40271 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 04:50:03] CVMFS is ok
[2025-10-13 04:50:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:50:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:50:03] Further information can be found at the LHC@home message board.
[2025-10-13 04:50:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:50:03] Checking for apptainer binary...
[2025-10-13 04:50:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:50:03] Running /usr/bin/apptainer --version
[2025-10-13 04:50:03] apptainer version 1.4.3-1.el9
[2025-10-13 04:50:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:50:03] c-206-37.aglt2.org
[2025-10-13 04:50:03] apptainer works
[2025-10-13 04:50:03] Set ATHENA_PROC_NUMBER=9
[2025-10-13 04:50:03] Set ATHENA_CORE_NUMBER=9
[2025-10-13 04:50:03] Starting ATLAS job with PandaID=6840969462
[2025-10-13 04:50:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 10:29:58]  *** The last 200 lines of the pilot log: ***
[2025-10-13 10:29:58] 2025-10-13 14:28:59,941 | INFO     | monitor loop #1225: job 0:6840969462 is in state 'finished'
[2025-10-13 10:29:58] 2025-10-13 14:28:59,943 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 10:29:58] 2025-10-13 14:29:01,555 | INFO     | time since job start (20325s) is within the limit (172800.0s)
[2025-10-13 10:29:58] 2025-10-13 14:29:02,150 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 10:29:58] 2025-10-13 14:29:02,154 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3273.9461874999997
[2025-10-13 10:29:58] 2025-10-13 14:29:02,162 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840969462/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 10:29:58] 2025-10-13 14:29:02,162 | INFO     | extracted standard info from prmon json
[2025-10-13 10:29:58] 2025-10-13 14:29:02,162 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 10:29:58] 2025-10-13 14:29:02,162 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 10:29:58] 2025-10-13 14:29:02,163 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 10:29:58] 2025-10-13 14:29:02,163 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 10:29:58] 2025-10-13 14:29:02,166 | INFO     | fitting pss+swap vs Time
[2025-10-13 10:29:58] 2025-10-13 14:29:02,166 | INFO     | sum of square deviations: 11449568688.366432
[2025-10-13 10:29:58] 2025-10-13 14:29:02,169 | INFO     | sum of deviations: 31873049454.6066
[2025-10-13 10:29:58] 2025-10-13 14:29:02,169 | INFO     | mean x: 1760355575.3033032
[2025-10-13 10:29:58] 2025-10-13 14:29:02,169 | INFO     | mean y: 2558846.993993994
[2025-10-13 10:29:58] 2025-10-13 14:29:02,169 | INFO     | -- intersect: -4897879050.404204
[2025-10-13 10:29:58] 2025-10-13 14:29:02,169 | INFO     | intersect: -4897879050.404204
[2025-10-13 10:29:58] 2025-10-13 14:29:02,169 | INFO     | chi2: 1.1642668441664852
[2025-10-13 10:29:58] 2025-10-13 14:29:02,169 | INFO     | sum of square deviations: 10941534152.899408
[2025-10-13 10:29:58] 2025-10-13 14:29:02,171 | INFO     | sum of deviations: 30360489447.67377
[2025-10-13 10:29:58] 2025-10-13 14:29:02,171 | INFO     | mean x: 1760355422.807927
[2025-10-13 10:29:58] 2025-10-13 14:29:02,171 | INFO     | mean y: 2558394.7408536584
[2025-10-13 10:29:58] 2025-10-13 14:29:02,171 | INFO     | -- intersect: -4882063038.730874
[2025-10-13 10:29:58] 2025-10-13 14:29:02,171 | INFO     | intersect: -4882063038.730874
[2025-10-13 10:29:58] 2025-10-13 14:29:02,172 | INFO     | chi2: 1.1639320280975665
[2025-10-13 10:29:58] 2025-10-13 14:29:02,172 | INFO     | current chi2=1.1639320280975665 (change=0.02875767446237113 %)
[2025-10-13 10:29:58] 2025-10-13 14:29:02,172 | INFO     | right removable region: 327
[2025-10-13 10:29:58] 2025-10-13 14:29:02,172 | INFO     | sum of square deviations: 10941472542.899412
[2025-10-13 10:29:58] 2025-10-13 14:29:02,174 | INFO     | sum of deviations: -6623537605.38109
[2025-10-13 10:29:58] 2025-10-13 14:29:02,174 | INFO     | mean x: 1760355727.807927
[2025-10-13 10:29:58] 2025-10-13 14:29:02,174 | INFO     | mean y: 2570295.4542682925
[2025-10-13 10:29:58] 2025-10-13 14:29:02,174 | INFO     | -- intersect: 1068220491.6475171
[2025-10-13 10:29:58] 2025-10-13 14:29:02,174 | INFO     | intersect: 1068220491.6475171
[2025-10-13 10:29:58] 2025-10-13 14:29:02,175 | INFO     | chi2: 0.03440712984012623
[2025-10-13 10:29:58] 2025-10-13 14:29:02,175 | INFO     | current chi2=0.03440712984012623 (change=97.04473849680407 %)
[2025-10-13 10:29:58] 2025-10-13 14:29:02,175 | INFO     | sum of square deviations: 10448652261.040318
[2025-10-13 10:29:58] 2025-10-13 14:29:02,177 | INFO     | sum of deviations: -3765576557.111468
[2025-10-13 10:29:58] 2025-10-13 14:29:02,177 | INFO     | mean x: 1760355880.3095975
[2025-10-13 10:29:58] 2025-10-13 14:29:02,177 | INFO     | mean y: 2569409.681114551
[2025-10-13 10:29:58] 2025-10-13 14:29:02,177 | INFO     | -- intersect: 636981836.2276126
[2025-10-13 10:29:58] 2025-10-13 14:29:02,177 | INFO     | intersect: 636981836.2276126
[2025-10-13 10:29:58] 2025-10-13 14:29:02,177 | INFO     | chi2: 0.0322909134544798
[2025-10-13 10:29:58] 2025-10-13 14:29:02,177 | INFO     | current chi2=0.0322909134544798 (change=6.1505170453899884 %)
[2025-10-13 10:29:58] 2025-10-13 14:29:02,177 | INFO     | left removable region: 20
[2025-10-13 10:29:58] 2025-10-13 14:29:02,178 | INFO     | sum of square deviations: 8971508222.35184
[2025-10-13 10:29:58] 2025-10-13 14:29:02,180 | INFO     | sum of deviations: 4509767455.798046
[2025-10-13 10:29:58] 2025-10-13 14:29:02,180 | INFO     | mean x: 1760356002.315961
[2025-10-13 10:29:58] 2025-10-13 14:29:02,180 | INFO     | mean y: 2565934.8371335506
[2025-10-13 10:29:58] 2025-10-13 14:29:02,180 | INFO     | -- intersect: -882323875.5611176
[2025-10-13 10:29:58] 2025-10-13 14:29:02,180 | INFO     | intersect: -882323875.5611176
[2025-10-13 10:29:58] 2025-10-13 14:29:02,180 | INFO     | chi2: 0.016771596295326433
[2025-10-13 10:29:58] 2025-10-13 14:29:02,180 | INFO     | -- intersect: -882323875.5611176
[2025-10-13 10:29:58] 2025-10-13 14:29:02,180 | INFO     | current memory leak: 0.50 B/s (using 307 data points, chi2=0.02)
[2025-10-13 10:29:58] 2025-10-13 14:29:02,181 | INFO     | could have reported an average CPU frequency of 3252 MHz (14 samples)
[2025-10-13 10:29:58] 2025-10-13 14:29:02,181 | INFO     | ..............................
[2025-10-13 10:29:58] 2025-10-13 14:29:02,181 | INFO     | . Timing measurements:
[2025-10-13 10:29:58] 2025-10-13 14:29:02,181 | INFO     | . get job = 0 s
[2025-10-13 10:29:58] 2025-10-13 14:29:02,181 | INFO     | . initial setup = 1 s
[2025-10-13 10:29:58] 2025-10-13 14:29:02,181 | INFO     | . payload setup = 7 s
[2025-10-13 10:29:58] 2025-10-13 14:29:02,181 | INFO     | . stage-in = 0 s
[2025-10-13 10:29:58] 2025-10-13 14:29:02,181 | INFO     | . payload execution = 20285 s
[2025-10-13 10:29:58] 2025-10-13 14:29:02,181 | INFO     | . stage-out = 2 s
[2025-10-13 10:29:58] 2025-10-13 14:29:02,181 | INFO     | . log creation = 0 s
[2025-10-13 10:29:58] 2025-10-13 14:29:02,181 | INFO     | ..............................
[2025-10-13 10:29:58] 2025-10-13 14:29:02,265 | INFO     | 
[2025-10-13 10:29:58] 2025-10-13 14:29:02,266 | INFO     | job summary report
[2025-10-13 10:29:58] 2025-10-13 14:29:02,266 | INFO     | --------------------------------------------------
[2025-10-13 10:29:58] 2025-10-13 14:29:02,266 | INFO     | PanDA job id: 6840969462
[2025-10-13 10:29:58] 2025-10-13 14:29:02,267 | INFO     | task id: 46676269
[2025-10-13 10:29:58] 2025-10-13 14:29:02,267 | INFO     | errors: (none)
[2025-10-13 10:29:58] 2025-10-13 14:29:02,267 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 10:29:58] 2025-10-13 14:29:02,267 | INFO     | pilot state: finished 
[2025-10-13 10:29:58] 2025-10-13 14:29:02,267 | INFO     | transexitcode: 0
[2025-10-13 10:29:58] 2025-10-13 14:29:02,267 | INFO     | exeerrorcode: 0
[2025-10-13 10:29:58] 2025-10-13 14:29:02,267 | INFO     | exeerrordiag: 
[2025-10-13 10:29:58] 2025-10-13 14:29:02,267 | INFO     | exitcode: 0
[2025-10-13 10:29:58] 2025-10-13 14:29:02,267 | INFO     | exitmsg: OK
[2025-10-13 10:29:58] 2025-10-13 14:29:02,267 | INFO     | cpuconsumptiontime: 33816 s
[2025-10-13 10:29:58] 2025-10-13 14:29:02,267 | INFO     | nevents: 400
[2025-10-13 10:29:58] 2025-10-13 14:29:02,267 | INFO     | neventsw: 0
[2025-10-13 10:29:58] 2025-10-13 14:29:02,267 | INFO     | pid: 2966708
[2025-10-13 10:29:58] 2025-10-13 14:29:02,267 | INFO     | pgrp: 2966708
[2025-10-13 10:29:58] 2025-10-13 14:29:02,267 | INFO     | corecount: 9
[2025-10-13 10:29:58] 2025-10-13 14:29:02,267 | INFO     | event service: False
[2025-10-13 10:29:58] 2025-10-13 14:29:02,267 | INFO     | sizes: {0: 2348029, 1: 2348885, 6: 2349147, 12: 2349175, 20297: 2382464, 20300: 2391462, 20301: 2391646, 20309: 2391670}
[2025-10-13 10:29:58] 2025-10-13 14:29:02,268 | INFO     | --------------------------------------------------
[2025-10-13 10:29:58] 2025-10-13 14:29:02,268 | INFO     | 
[2025-10-13 10:29:58] 2025-10-13 14:29:02,268 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 10:29:58] 2025-10-13 14:29:02,302 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 10:29:58] 2025-10-13 14:29:02,303 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 10:29:58] 2025-10-13 14:29:02,303 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 10:29:58] 2025-10-13 14:29:02,303 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 10:29:58] 2025-10-13 14:29:02,303 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 10:29:58] 2025-10-13 14:29:02,303 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 10:29:58] 2025-10-13 14:29:02,303 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 10:29:58] 2025-10-13 14:29:02,303 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 10:29:58] 2025-10-13 14:29:02,303 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 10:29:58] 2025-10-13 14:29:02,303 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 10:29:58] 2025-10-13 14:29:02,303 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 10:29:58] 2025-10-13 14:29:02,303 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 10:29:58] 2025-10-13 14:29:02,303 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 10:29:58] 2025-10-13 14:29:02,304 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 10:29:58] 2025-10-13 14:29:02,304 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 10:29:58] 2025-10-13 14:29:02,304 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 10:29:58] 2025-10-13 14:29:02,304 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 10:29:58] 2025-10-13 14:29:02,304 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 10:29:58] 2025-10-13 14:29:02,304 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 10:29:58] 2025-10-13 14:29:02,304 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 10:29:58] 2025-10-13 14:29:02,304 | INFO     | job 6840969462 has completed (purged errors)
[2025-10-13 10:29:58] 2025-10-13 14:29:02,304 | INFO     | overall cleanup function is called
[2025-10-13 10:29:58] 2025-10-13 14:29:03,314 | INFO     | --- collectZombieJob: --- 10, [2966708]
[2025-10-13 10:29:58] 2025-10-13 14:29:03,314 | INFO     | zombie collector waiting for pid 2966708
[2025-10-13 10:29:58] 2025-10-13 14:29:03,314 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 10:29:58] 2025-10-13 14:29:03,314 | INFO     | collected zombie processes
[2025-10-13 10:29:58] 2025-10-13 14:29:03,315 | INFO     | will attempt to kill all subprocesses of pid=2966708
[2025-10-13 10:29:58] 2025-10-13 14:29:03,565 | INFO     | process IDs to be killed: [2966708] (in reverse order)
[2025-10-13 10:29:58] 2025-10-13 14:29:03,679 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 10:29:58] 2025-10-13 14:29:03,680 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 10:29:58] 2025-10-13 14:29:03,690 | INFO     | did not find any defunct processes belonging to 2966708
[2025-10-13 10:29:58] 2025-10-13 14:29:03,699 | INFO     | did not find any defunct processes belonging to 2966708
[2025-10-13 10:29:58] 2025-10-13 14:29:03,699 | INFO     | ready for new job
[2025-10-13 10:29:58] 2025-10-13 14:29:03,699 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 10:29:58] 2025-10-13 14:29:03,728 | INFO     | ***************************************
[2025-10-13 10:29:58] 2025-10-13 14:29:03,728 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 10:29:58] 2025-10-13 14:29:03,728 | INFO     | ***************************************
[2025-10-13 10:29:58] 2025-10-13 14:29:03,728 | INFO     | 
[2025-10-13 10:29:58] 2025-10-13 14:29:03,739 | INFO     | architecture information:
[2025-10-13 10:29:58] 2025-10-13 14:29:03,755 | INFO     | executing command: cat /etc/os-release
[2025-10-13 10:29:58] 2025-10-13 14:29:03,770 | INFO     | cat /etc/os-release:
[2025-10-13 10:29:58] NAME="CentOS Linux"
[2025-10-13 10:29:58] VERSION="7 (Core)"
[2025-10-13 10:29:58] ID="centos"
[2025-10-13 10:29:58] ID_LIKE="rhel fedora"
[2025-10-13 10:29:58] VERSION_ID="7"
[2025-10-13 10:29:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 10:29:58] ANSI_COLOR="0;31"
[2025-10-13 10:29:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 10:29:58] HOME_URL="https://www.centos.org/"
[2025-10-13 10:29:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 10:29:58] 
[2025-10-13 10:29:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 10:29:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 10:29:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 10:29:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 10:29:58] 
[2025-10-13 10:29:58] 2025-10-13 14:29:03,771 | INFO     | ***************************************
[2025-10-13 10:29:58] 2025-10-13 14:29:04,274 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 10:29:58] 2025-10-13 14:29:04,353 | INFO     | sufficient remaining disk space (86026223616 B)
[2025-10-13 10:29:58] 2025-10-13 14:29:04,353 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 10:29:58] 2025-10-13 14:29:04,353 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 10:29:58] 2025-10-13 14:29:04,353 | INFO     | update_server=False
[2025-10-13 10:29:58] 2025-10-13 14:29:04,353 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 10:29:58] 2025-10-13 14:29:04,354 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:29:58] 2025-10-13 14:29:04,354 | INFO     | aborting loop
[2025-10-13 10:29:58] 2025-10-13 14:29:04,408 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 10:29:58] 2025-10-13 14:29:04,593 | INFO     | all data control threads have been joined
[2025-10-13 10:29:58] 2025-10-13 14:29:04,857 | INFO     | all job control threads have been joined
[2025-10-13 10:29:58] 2025-10-13 14:29:05,199 | INFO     | all payload control threads have been joined
[2025-10-13 10:29:58] 2025-10-13 14:29:05,359 | INFO     | [job] retrieve thread has finished
[2025-10-13 10:29:58] 2025-10-13 14:29:05,360 | INFO     | [job] job monitor thread has finished
[2025-10-13 10:29:58] 2025-10-13 14:29:05,479 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 10:29:58] 2025-10-13 14:29:05,489 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 10:29:58] 2025-10-13 14:29:05,599 | INFO     | [data] control thread has finished
[2025-10-13 10:29:58] 2025-10-13 14:29:05,613 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 10:29:58] 2025-10-13 14:29:05,625 | INFO     | [payload] validate_post thread has finished
[2025-10-13 10:29:58] 2025-10-13 14:29:05,814 | INFO     | [payload] failed_post thread has finished
[2025-10-13 10:29:58] 2025-10-13 14:29:05,863 | INFO     | [job] control thread has finished
[2025-10-13 10:29:58] 2025-10-13 14:29:05,890 | INFO     | [data] copytool_in thread has finished
[2025-10-13 10:29:58] 2025-10-13 14:29:06,045 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 10:29:58] 2025-10-13 14:29:06,205 | INFO     | [payload] control thread has finished
[2025-10-13 10:29:58] 2025-10-13 14:29:06,299 | INFO     | [job] validate thread has finished
[2025-10-13 10:29:58] 2025-10-13 14:29:06,685 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 10:29:58] 2025-10-13 14:29:07,288 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:29:58] 2025-10-13 14:29:07,620 | INFO     | [data] copytool_out thread has finished
[2025-10-13 10:29:58] 2025-10-13 14:29:08,295 | INFO     | [job] queue monitor thread has finished
[2025-10-13 10:29:58] 2025-10-13 14:29:08,417 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 10:29:58] 2025-10-13 14:29:34,921 | INFO     | PID=2947711 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 10:29:58] 2025-10-13 14:29:34,922 | INFO     | .. there are 10 such processes running
[2025-10-13 10:29:58] 2025-10-13 14:29:34,922 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 10:29:58] 2025-10-13 14:29:34,922 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 10:29:58] 2025-10-13 14:29:34,923 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 10:29:58] 2025-10-13 14:29:52,077 | INFO     | [monitor] cgroup control has ended
[2025-10-13 10:29:58] 2025-10-13 14:29:52,654 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139809149052736)>', '<ExcThread(monitor, started 139808206735104)>']
[2025-10-13 10:29:58] 2025-10-13 14:29:53,050 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 10:29:58] 2025-10-13 14:29:53,050 | INFO     | [monitor] control thread has ended
[2025-10-13 10:29:58] 2025-10-13 14:29:57,680 | INFO     | all workflow threads have been joined
[2025-10-13 10:29:58] 2025-10-13 14:29:57,681 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 10:29:58] 2025-10-13 14:29:57,681 | INFO     | traces error code: 0
[2025-10-13 10:29:58] 2025-10-13 14:29:57,681 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 10:29:58] 2025-10-13 14:29:57,839 [wrapper] ==== pilot stdout END ====
[2025-10-13 10:29:58] 2025-10-13 14:29:57,846 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 10:29:58] 2025-10-13 14:29:57,851 [wrapper] pilotpid: 2947711
[2025-10-13 10:29:58] 2025-10-13 14:29:57,856 [wrapper] Pilot exit status: 0
[2025-10-13 10:29:58] 2025-10-13 14:29:57,889 [wrapper] pandaids: 6840969462 6840969462
[2025-10-13 10:29:58] 2025-10-13 14:29:57,959 [wrapper] cleanup supervisor_pilot 3493412 2947712
[2025-10-13 10:29:58] 2025-10-13 14:29:57,963 [wrapper] Test setup, not cleaning
[2025-10-13 10:29:58] 2025-10-13 14:29:57,966 [wrapper] apfmon messages muted
[2025-10-13 10:29:58] 2025-10-13 14:29:57,969 [wrapper] ==== wrapper stdout END ====
[2025-10-13 10:29:58] 2025-10-13 14:29:57,972 [wrapper] ==== wrapper stderr END ====
[2025-10-13 10:29:58]  *** Error codes and diagnostics ***
[2025-10-13 10:29:58]     "exeErrorCode": 0,
[2025-10-13 10:29:58]     "exeErrorDiag": "",
[2025-10-13 10:29:58]     "pilotErrorCode": 0,
[2025-10-13 10:29:58]     "pilotErrorDiag": "",
[2025-10-13 10:29:58]  *** Listing of results directory ***
[2025-10-13 10:29:58] total 639172
[2025-10-13 10:29:58] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-13 10:29:58] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 19:11 pilot3.tar.gz
[2025-10-13 10:29:58] -rwx------. 1 boincer umatlas     36292 Oct 12 19:35 runpilot2-wrapper.sh
[2025-10-13 10:29:58] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:35 queuedata.json
[2025-10-13 10:29:58] -rw-r--r--. 1 boincer umatlas       100 Oct 13 03:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 10:29:58] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 03:33 run_atlas
[2025-10-13 10:29:58] -rw-r--r--. 1 boincer umatlas       105 Oct 13 03:33 job.xml
[2025-10-13 10:29:58] -rw-r--r--. 3 boincer umatlas 222693810 Oct 13 03:33 EVNT.46676267._004661.pool.root.1
[2025-10-13 10:29:58] -rw-r--r--. 3 boincer umatlas 222693810 Oct 13 03:33 ATLAS.root_0
[2025-10-13 10:29:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 03:33 start_atlas.sh
[2025-10-13 10:29:58] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 03:33 shared
[2025-10-13 10:29:58] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 03:33 input.tar.gz
[2025-10-13 10:29:58] -rw-r--r--. 1 boincer umatlas         0 Oct 13 03:33 boinc_lockfile
[2025-10-13 10:29:58] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 04:50 pandaJob.out
[2025-10-13 10:29:58] -rw-------. 1 boincer umatlas    972857 Oct 13 04:50 agis_schedconf.cvmfs.json
[2025-10-13 10:29:58] -rw-r--r--. 1 boincer umatlas      6900 Oct 13 10:22 init_data.xml
[2025-10-13 10:29:58] -rw-------. 1 boincer umatlas 198914581 Oct 13 10:28 HITS.46676269._092308.pool.root.1
[2025-10-13 10:29:58] -rw-r--r--. 1 boincer umatlas       531 Oct 13 10:28 boinc_task_state.xml
[2025-10-13 10:29:58] -rw-------. 1 boincer umatlas      1044 Oct 13 10:28 memory_monitor_summary.json
[2025-10-13 10:29:58] -rw-------. 1 boincer umatlas   1560580 Oct 13 10:28 agis_ddmendpoints.agis.ALL.json
[2025-10-13 10:29:58] -rw-------. 1 boincer umatlas    551243 Oct 13 10:28 log.46676269._092308.job.log.tgz.1
[2025-10-13 10:29:58] -rw-------. 1 boincer umatlas      7795 Oct 13 10:29 heartbeat.json
[2025-10-13 10:29:58] -rw-------. 1 boincer umatlas        96 Oct 13 10:29 pilot_heartbeat.json
[2025-10-13 10:29:58] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 10:29 boinc_mmap_file
[2025-10-13 10:29:58] -rw-r--r--. 1 boincer umatlas        28 Oct 13 10:29 wrapper_checkpoint.txt
[2025-10-13 10:29:58] -rw-------. 1 boincer umatlas      4824 Oct 13 10:29 pilotlog.txt
[2025-10-13 10:29:58] -rw-------. 1 boincer umatlas   2603107 Oct 13 10:29 log.46676269._092308.job.log.1
[2025-10-13 10:29:58] -rw-------. 1 boincer umatlas       357 Oct 13 10:29 output.list
[2025-10-13 10:29:58] -rw-r--r--. 1 boincer umatlas       620 Oct 13 10:29 runtime_log
[2025-10-13 10:29:58] -rw-------. 1 boincer umatlas   3174400 Oct 13 10:29 result.tar.gz
[2025-10-13 10:29:58] -rw-------. 1 boincer umatlas       783 Oct 13 10:29 Y2cMDm0lKS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmF4lNDmSkw37n.diag
[2025-10-13 10:29:58] -rw-r--r--. 1 boincer umatlas      8789 Oct 13 10:29 runtime_log.err
[2025-10-13 10:29:58] -rw-r--r--. 1 boincer umatlas     23384 Oct 13 10:29 stderr.txt
[2025-10-13 10:29:58] HITS file was successfully produced:
[2025-10-13 10:29:58] -rw-------. 1 boincer umatlas 198914581 Oct 13 10:28 shared/HITS.pool.root.1
[2025-10-13 10:29:58]  *** Contents of shared directory: ***
[2025-10-13 10:29:58] total 415412
[2025-10-13 10:29:58] -rw-r--r--. 3 boincer umatlas 222693810 Oct 13 03:33 ATLAS.root_0
[2025-10-13 10:29:58] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 03:33 start_atlas.sh
[2025-10-13 10:29:58] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 03:33 input.tar.gz
[2025-10-13 10:29:58] -rw-------. 1 boincer umatlas 198914581 Oct 13 10:28 HITS.pool.root.1
[2025-10-13 10:29:58] -rw-------. 1 boincer umatlas   3174400 Oct 13 10:29 result.tar.gz
10:30:20 (2935960): run_atlas exited; CPU time 34124.309581
10:30:20 (2935960): called boinc_finish(0)

</stderr_txt>
]]>

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