Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:16:08 (3906724): wrapper (7.7.26015): starting
18:16:08 (3906724): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 18:16:08] Arguments: --nthreads 8
[2025-10-13 18:16:08] Threads: 8
[2025-10-13 18:16:08] Checking for CVMFS
[2025-10-13 18:16:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 18:16:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 18:16:10] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 18:16:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 18:16:11] 2.13.2.0 128817 111181 1552540 151676 3 20 38422379 39288833 19045 16776704 1 157419572 99.593 176851473 29924 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 18:16:11] CVMFS is ok
[2025-10-13 18:16:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 18:16:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 18:16:11] Further information can be found at the LHC@home message board.
[2025-10-13 18:16:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 18:16:11] Checking for apptainer binary...
[2025-10-13 18:16:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 18:16:11] Running /usr/bin/apptainer --version
[2025-10-13 18:16:12] apptainer version 1.4.3-1.el9
[2025-10-13 18:16:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 18:16:13] c-211-21.aglt2.org
[2025-10-13 18:16:13] apptainer works
[2025-10-13 18:16:13] Set ATHENA_PROC_NUMBER=8
[2025-10-13 18:16:13] Set ATHENA_CORE_NUMBER=8
[2025-10-13 18:16:13] Starting ATLAS job with PandaID=6841124713
[2025-10-13 18:16:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:29:28 (3959635): wrapper (7.7.26015): starting
18:29:28 (3959635): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 18:29:28] Arguments: --nthreads 8
[2025-10-13 18:29:28] Threads: 8
[2025-10-13 18:29:28] This job has been restarted, cleaning up previous attempt
[2025-10-13 18:29:28] Checking for CVMFS
[2025-10-13 18:29:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 18:29:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 18:29:30] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 18:29:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 18:29:32] 2.13.2.0 128817 111194 1555140 151676 2 198 38906791 39288833 18129 16776704 1 157497157 99.593 176986310 29913 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 18:29:32] CVMFS is ok
[2025-10-13 18:29:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 18:29:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 18:29:32] Further information can be found at the LHC@home message board.
[2025-10-13 18:29:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 18:29:32] Checking for apptainer binary...
[2025-10-13 18:29:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 18:29:32] Running /usr/bin/apptainer --version
[2025-10-13 18:29:32] apptainer version 1.4.3-1.el9
[2025-10-13 18:29:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 18:29:33] c-211-21.aglt2.org
[2025-10-13 18:29:33] apptainer works
[2025-10-13 18:29:33] Set ATHENA_PROC_NUMBER=8
[2025-10-13 18:29:33] Set ATHENA_CORE_NUMBER=8
[2025-10-13 18:29:33] Starting ATLAS job with PandaID=6841124713
[2025-10-13 18:29:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 07:02:36]  *** The last 200 lines of the pilot log: ***
[2025-10-14 07:02:36] 2025-10-14 11:01:41,956 | INFO     | monitor loop #2383: job 0:6841124713 is in state 'finished'
[2025-10-14 07:02:36] 2025-10-14 11:01:41,956 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 07:02:36] 2025-10-14 11:01:42,493 | INFO     | time since job start (45098s) is within the limit (172800.0s)
[2025-10-14 07:02:36] 2025-10-14 11:01:42,954 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-14 07:02:36] 2025-10-14 11:01:42,962 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2899.9153000000006
[2025-10-14 07:02:36] 2025-10-14 11:01:42,970 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6841124713/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 07:02:36] 2025-10-14 11:01:42,971 | INFO     | extracted standard info from prmon json
[2025-10-14 07:02:36] 2025-10-14 11:01:42,972 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 07:02:36] 2025-10-14 11:01:42,972 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 07:02:36] 2025-10-14 11:01:42,972 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 07:02:36] 2025-10-14 11:01:42,972 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 07:02:36] 2025-10-14 11:01:42,990 | INFO     | fitting pss+swap vs Time
[2025-10-14 07:02:36] 2025-10-14 11:01:42,991 | INFO     | sum of square deviations: 124633585877.71947
[2025-10-14 07:02:36] 2025-10-14 11:01:43,000 | INFO     | sum of deviations: 225686534125.08566
[2025-10-14 07:02:36] 2025-10-14 11:01:43,000 | INFO     | mean x: 1760417159.8658535
[2025-10-14 07:02:36] 2025-10-14 11:01:43,001 | INFO     | mean y: 2524692.1422764226
[2025-10-14 07:02:36] 2025-10-14 11:01:43,001 | INFO     | -- intersect: -3185239220.9834585
[2025-10-14 07:02:36] 2025-10-14 11:01:43,001 | INFO     | intersect: -3185239220.9834585
[2025-10-14 07:02:36] 2025-10-14 11:01:43,001 | INFO     | chi2: 1.8591232041819596
[2025-10-14 07:02:36] 2025-10-14 11:01:43,002 | INFO     | sum of square deviations: 122117518724.54579
[2025-10-14 07:02:36] 2025-10-14 11:01:43,011 | INFO     | sum of deviations: 222784971244.9153
[2025-10-14 07:02:36] 2025-10-14 11:01:43,011 | INFO     | mean x: 1760417007.3683493
[2025-10-14 07:02:36] 2025-10-14 11:01:43,012 | INFO     | mean y: 2524516.3929058663
[2025-10-14 07:02:36] 2025-10-14 11:01:43,012 | INFO     | -- intersect: -3209090462.865479
[2025-10-14 07:02:36] 2025-10-14 11:01:43,012 | INFO     | intersect: -3209090462.865479
[2025-10-14 07:02:36] 2025-10-14 11:01:43,012 | INFO     | chi2: 1.8592039772886424
[2025-10-14 07:02:36] 2025-10-14 11:01:43,013 | INFO     | current chi2=1.8592039772886424 (change=-0.00434468821114486 %)
[2025-10-14 07:02:36] 2025-10-14 11:01:43,013 | INFO     | right removable region: 732
[2025-10-14 07:02:36] 2025-10-14 11:01:43,013 | INFO     | sum of square deviations: 122117354024.54578
[2025-10-14 07:02:36] 2025-10-14 11:01:43,022 | INFO     | sum of deviations: 84834714487.87172
[2025-10-14 07:02:36] 2025-10-14 11:01:43,023 | INFO     | mean x: 1760417312.3683493
[2025-10-14 07:02:36] 2025-10-14 11:01:43,023 | INFO     | mean y: 2533209.563437926
[2025-10-14 07:02:36] 2025-10-14 11:01:43,023 | INFO     | -- intersect: -1220425650.5200922
[2025-10-14 07:02:36] 2025-10-14 11:01:43,023 | INFO     | intersect: -1220425650.5200922
[2025-10-14 07:02:36] 2025-10-14 11:01:43,024 | INFO     | chi2: 0.16651927148113468
[2025-10-14 07:02:36] 2025-10-14 11:01:43,024 | INFO     | current chi2=0.16651927148113468 (change=91.04312876593859 %)
[2025-10-14 07:02:36] 2025-10-14 11:01:43,024 | INFO     | sum of square deviations: 119635215833.86327
[2025-10-14 07:02:36] 2025-10-14 11:01:43,033 | INFO     | sum of deviations: 63396791502.703186
[2025-10-14 07:02:36] 2025-10-14 11:01:43,033 | INFO     | mean x: 1760417464.8708792
[2025-10-14 07:02:36] 2025-10-14 11:01:43,033 | INFO     | mean y: 2534525.901098901
[2025-10-14 07:02:36] 2025-10-14 11:01:43,034 | INFO     | -- intersect: -930341452.1313343
[2025-10-14 07:02:36] 2025-10-14 11:01:43,034 | INFO     | intersect: -930341452.1313343
[2025-10-14 07:02:36] 2025-10-14 11:01:43,034 | INFO     | chi2: 0.13936439020505534
[2025-10-14 07:02:36] 2025-10-14 11:01:43,035 | INFO     | current chi2=0.13936439020505534 (change=16.3073505153761 %)
[2025-10-14 07:02:36] 2025-10-14 11:01:43,035 | INFO     | left removable region: 20
[2025-10-14 07:02:36] 2025-10-14 11:01:43,035 | INFO     | sum of square deviations: 111919410121.0565
[2025-10-14 07:02:36] 2025-10-14 11:01:43,044 | INFO     | sum of deviations: 41795827201.528076
[2025-10-14 07:02:36] 2025-10-14 11:01:43,044 | INFO     | mean x: 1760417586.8651686
[2025-10-14 07:02:36] 2025-10-14 11:01:43,044 | INFO     | mean y: 2535633.4325842694
[2025-10-14 07:02:36] 2025-10-14 11:01:43,044 | INFO     | -- intersect: -654884819.2267231
[2025-10-14 07:02:36] 2025-10-14 11:01:43,044 | INFO     | intersect: -654884819.2267231
[2025-10-14 07:02:36] 2025-10-14 11:01:43,045 | INFO     | chi2: 0.10545500252941745
[2025-10-14 07:02:36] 2025-10-14 11:01:43,045 | INFO     | -- intersect: -654884819.2267231
[2025-10-14 07:02:36] 2025-10-14 11:01:43,045 | INFO     | current memory leak: 0.37 B/s (using 712 data points, chi2=0.11)
[2025-10-14 07:02:36] 2025-10-14 11:01:43,046 | INFO     | could have reported an average CPU frequency of 2899 MHz (28 samples)
[2025-10-14 07:02:36] 2025-10-14 11:01:43,046 | INFO     | ..............................
[2025-10-14 07:02:36] 2025-10-14 11:01:43,046 | INFO     | . Timing measurements:
[2025-10-14 07:02:36] 2025-10-14 11:01:43,046 | INFO     | . get job = 0 s
[2025-10-14 07:02:36] 2025-10-14 11:01:43,046 | INFO     | . initial setup = 2 s
[2025-10-14 07:02:36] 2025-10-14 11:01:43,046 | INFO     | . payload setup = 15 s
[2025-10-14 07:02:36] 2025-10-14 11:01:43,047 | INFO     | . stage-in = 0 s
[2025-10-14 07:02:36] 2025-10-14 11:01:43,047 | INFO     | . payload execution = 45028 s
[2025-10-14 07:02:36] 2025-10-14 11:01:43,047 | INFO     | . stage-out = 2 s
[2025-10-14 07:02:36] 2025-10-14 11:01:43,047 | INFO     | . log creation = 0 s
[2025-10-14 07:02:36] 2025-10-14 11:01:43,047 | INFO     | ..............................
[2025-10-14 07:02:36] 2025-10-14 11:01:43,126 | INFO     | 
[2025-10-14 07:02:36] 2025-10-14 11:01:43,126 | INFO     | job summary report
[2025-10-14 07:02:36] 2025-10-14 11:01:43,126 | INFO     | --------------------------------------------------
[2025-10-14 07:02:36] 2025-10-14 11:01:43,126 | INFO     | PanDA job id: 6841124713
[2025-10-14 07:02:36] 2025-10-14 11:01:43,127 | INFO     | task id: 46676269
[2025-10-14 07:02:36] 2025-10-14 11:01:43,127 | INFO     | errors: (none)
[2025-10-14 07:02:36] 2025-10-14 11:01:43,127 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 07:02:36] 2025-10-14 11:01:43,127 | INFO     | pilot state: finished 
[2025-10-14 07:02:36] 2025-10-14 11:01:43,127 | INFO     | transexitcode: 0
[2025-10-14 07:02:36] 2025-10-14 11:01:43,127 | INFO     | exeerrorcode: 0
[2025-10-14 07:02:36] 2025-10-14 11:01:43,127 | INFO     | exeerrordiag: 
[2025-10-14 07:02:36] 2025-10-14 11:01:43,127 | INFO     | exitcode: 0
[2025-10-14 07:02:36] 2025-10-14 11:01:43,127 | INFO     | exitmsg: OK
[2025-10-14 07:02:36] 2025-10-14 11:01:43,127 | INFO     | cpuconsumptiontime: 79525 s
[2025-10-14 07:02:36] 2025-10-14 11:01:43,127 | INFO     | nevents: 400
[2025-10-14 07:02:36] 2025-10-14 11:01:43,128 | INFO     | neventsw: 0
[2025-10-14 07:02:36] 2025-10-14 11:01:43,128 | INFO     | pid: 3984629
[2025-10-14 07:02:36] 2025-10-14 11:01:43,128 | INFO     | pgrp: 3984629
[2025-10-14 07:02:36] 2025-10-14 11:01:43,128 | INFO     | corecount: 8
[2025-10-14 07:02:36] 2025-10-14 11:01:43,128 | INFO     | event service: False
[2025-10-14 07:02:36] 2025-10-14 11:01:43,128 | INFO     | sizes: {0: 2348686, 1: 2348714, 2: 2348913, 13: 2348913, 16: 2349231, 24: 2349259, 45048: 2393904, 45049: 2393903, 45051: 2402957, 45054: 2403013, 45060: 2403207}
[2025-10-14 07:02:36] 2025-10-14 11:01:43,128 | INFO     | --------------------------------------------------
[2025-10-14 07:02:36] 2025-10-14 11:01:43,128 | INFO     | 
[2025-10-14 07:02:36] 2025-10-14 11:01:43,128 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-14 07:02:36] 2025-10-14 11:01:43,146 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 07:02:36] 2025-10-14 11:01:43,147 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 07:02:36] 2025-10-14 11:01:43,147 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 07:02:36] 2025-10-14 11:01:43,147 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 07:02:36] 2025-10-14 11:01:43,147 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 07:02:36] 2025-10-14 11:01:43,147 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 07:02:36] 2025-10-14 11:01:43,147 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 07:02:36] 2025-10-14 11:01:43,147 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 07:02:36] 2025-10-14 11:01:43,147 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 07:02:36] 2025-10-14 11:01:43,148 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 07:02:36] 2025-10-14 11:01:43,148 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 07:02:36] 2025-10-14 11:01:43,148 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 07:02:36] 2025-10-14 11:01:43,148 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 07:02:36] 2025-10-14 11:01:43,148 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 07:02:36] 2025-10-14 11:01:43,148 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 07:02:36] 2025-10-14 11:01:43,148 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 07:02:36] 2025-10-14 11:01:43,148 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 07:02:36] 2025-10-14 11:01:43,148 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 07:02:36] 2025-10-14 11:01:43,148 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 07:02:36] 2025-10-14 11:01:43,149 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 07:02:36] 2025-10-14 11:01:43,149 | INFO     | job 6841124713 has completed (purged errors)
[2025-10-14 07:02:36] 2025-10-14 11:01:43,149 | INFO     | overall cleanup function is called
[2025-10-14 07:02:36] 2025-10-14 11:01:44,156 | INFO     | --- collectZombieJob: --- 10, [3984629]
[2025-10-14 07:02:36] 2025-10-14 11:01:44,156 | INFO     | zombie collector waiting for pid 3984629
[2025-10-14 07:02:36] 2025-10-14 11:01:44,156 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 07:02:36] 2025-10-14 11:01:44,156 | INFO     | collected zombie processes
[2025-10-14 07:02:36] 2025-10-14 11:01:44,156 | INFO     | will attempt to kill all subprocesses of pid=3984629
[2025-10-14 07:02:36] 2025-10-14 11:01:44,456 | INFO     | process IDs to be killed: [3984629] (in reverse order)
[2025-10-14 07:02:36] 2025-10-14 11:01:44,589 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 07:02:36] 2025-10-14 11:01:44,590 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 07:02:36] 2025-10-14 11:01:44,612 | INFO     | did not find any defunct processes belonging to 3984629
[2025-10-14 07:02:36] 2025-10-14 11:01:44,634 | INFO     | did not find any defunct processes belonging to 3984629
[2025-10-14 07:02:36] 2025-10-14 11:01:44,634 | INFO     | ready for new job
[2025-10-14 07:02:36] 2025-10-14 11:01:44,634 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 07:02:36] 2025-10-14 11:01:44,639 | INFO     | ***************************************
[2025-10-14 07:02:36] 2025-10-14 11:01:44,639 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 07:02:36] 2025-10-14 11:01:44,639 | INFO     | ***************************************
[2025-10-14 07:02:36] 2025-10-14 11:01:44,639 | INFO     | 
[2025-10-14 07:02:36] 2025-10-14 11:01:44,642 | INFO     | architecture information:
[2025-10-14 07:02:36] 2025-10-14 11:01:44,642 | INFO     | executing command: cat /etc/os-release
[2025-10-14 07:02:36] 2025-10-14 11:01:44,661 | INFO     | cat /etc/os-release:
[2025-10-14 07:02:36] NAME="CentOS Linux"
[2025-10-14 07:02:36] VERSION="7 (Core)"
[2025-10-14 07:02:36] ID="centos"
[2025-10-14 07:02:36] ID_LIKE="rhel fedora"
[2025-10-14 07:02:36] VERSION_ID="7"
[2025-10-14 07:02:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 07:02:36] ANSI_COLOR="0;31"
[2025-10-14 07:02:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 07:02:36] HOME_URL="https://www.centos.org/"
[2025-10-14 07:02:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 07:02:36] 
[2025-10-14 07:02:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 07:02:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 07:02:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 07:02:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 07:02:36] 
[2025-10-14 07:02:36] 2025-10-14 11:01:44,662 | INFO     | ***************************************
[2025-10-14 07:02:36] 2025-10-14 11:01:45,164 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-14 07:02:36] 2025-10-14 11:01:45,183 | INFO     | sufficient remaining disk space (53412364288 B)
[2025-10-14 07:02:36] 2025-10-14 11:01:45,184 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 07:02:36] 2025-10-14 11:01:45,184 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 07:02:36] 2025-10-14 11:01:45,184 | INFO     | update_server=False
[2025-10-14 07:02:36] 2025-10-14 11:01:45,184 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 07:02:36] 2025-10-14 11:01:45,184 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 07:02:36] 2025-10-14 11:01:45,466 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 07:02:36] 2025-10-14 11:01:45,466 | INFO     | aborting loop
[2025-10-14 07:02:36] 2025-10-14 11:01:45,525 | INFO     | all job control threads have been joined
[2025-10-14 07:02:36] 2025-10-14 11:01:46,075 | INFO     | all data control threads have been joined
[2025-10-14 07:02:36] 2025-10-14 11:01:46,189 | INFO     | [job] retrieve thread has finished
[2025-10-14 07:02:36] 2025-10-14 11:01:46,236 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 07:02:36] 2025-10-14 11:01:46,471 | INFO     | [job] job monitor thread has finished
[2025-10-14 07:02:36] 2025-10-14 11:01:46,530 | INFO     | [job] control thread has finished
[2025-10-14 07:02:36] 2025-10-14 11:01:46,584 | INFO     | all payload control threads have been joined
[2025-10-14 07:02:36] 2025-10-14 11:01:46,738 | INFO     | [job] validate thread has finished
[2025-10-14 07:02:36] 2025-10-14 11:01:46,947 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 07:02:36] 2025-10-14 11:01:47,080 | INFO     | [data] control thread has finished
[2025-10-14 07:02:36] 2025-10-14 11:01:47,175 | INFO     | [data] copytool_in thread has finished
[2025-10-14 07:02:36] 2025-10-14 11:01:47,190 | INFO     | [data] copytool_out thread has finished
[2025-10-14 07:02:36] 2025-10-14 11:01:47,226 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 07:02:36] 2025-10-14 11:01:47,313 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 07:02:36] 2025-10-14 11:01:47,442 | INFO     | [payload] validate_post thread has finished
[2025-10-14 07:02:36] 2025-10-14 11:01:47,589 | INFO     | [payload] control thread has finished
[2025-10-14 07:02:36] 2025-10-14 11:01:47,750 | INFO     | [payload] failed_post thread has finished
[2025-10-14 07:02:36] 2025-10-14 11:01:48,089 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 07:02:36] 2025-10-14 11:01:48,138 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 07:02:36] 2025-10-14 11:01:49,143 | INFO     | [job] queue monitor thread has finished
[2025-10-14 07:02:36] 2025-10-14 11:01:52,095 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 07:02:36] 2025-10-14 11:02:16,159 | INFO     | PID=3969061 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 07:02:36] 2025-10-14 11:02:16,159 | INFO     | .. there are 21 such processes running
[2025-10-14 07:02:36] 2025-10-14 11:02:16,161 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 07:02:36] 2025-10-14 11:02:16,161 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 07:02:36] 2025-10-14 11:02:16,161 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 07:02:36] 2025-10-14 11:02:30,018 | INFO     | [monitor] cgroup control has ended
[2025-10-14 07:02:36] 2025-10-14 11:02:30,728 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140198383478592)>', '<ExcThread(monitor, started 140197589149440)>']
[2025-10-14 07:02:36] 2025-10-14 11:02:31,233 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 07:02:36] 2025-10-14 11:02:31,234 | INFO     | [monitor] control thread has ended
[2025-10-14 07:02:36] 2025-10-14 11:02:35,753 | INFO     | all workflow threads have been joined
[2025-10-14 07:02:36] 2025-10-14 11:02:35,753 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 07:02:36] 2025-10-14 11:02:35,754 | INFO     | traces error code: 0
[2025-10-14 07:02:36] 2025-10-14 11:02:35,754 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 07:02:36] 2025-10-14 11:02:35,968 [wrapper] ==== pilot stdout END ====
[2025-10-14 07:02:36] 2025-10-14 11:02:35,971 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 07:02:36] 2025-10-14 11:02:35,974 [wrapper] pilotpid: 3969061
[2025-10-14 07:02:36] 2025-10-14 11:02:35,977 [wrapper] Pilot exit status: 0
[2025-10-14 07:02:36] 2025-10-14 11:02:35,989 [wrapper] pandaids: 6841124713 6841124713
[2025-10-14 07:02:36] 2025-10-14 11:02:36,066 [wrapper] cleanup supervisor_pilot 3402004 3969062
[2025-10-14 07:02:36] 2025-10-14 11:02:36,071 [wrapper] Test setup, not cleaning
[2025-10-14 07:02:36] 2025-10-14 11:02:36,078 [wrapper] apfmon messages muted
[2025-10-14 07:02:36] 2025-10-14 11:02:36,081 [wrapper] ==== wrapper stdout END ====
[2025-10-14 07:02:36] 2025-10-14 11:02:36,084 [wrapper] ==== wrapper stderr END ====
[2025-10-14 07:02:36]  *** Error codes and diagnostics ***
[2025-10-14 07:02:36]     "exeErrorCode": 0,
[2025-10-14 07:02:36]     "exeErrorDiag": "",
[2025-10-14 07:02:36]     "pilotErrorCode": 0,
[2025-10-14 07:02:36]     "pilotErrorDiag": "",
[2025-10-14 07:02:36]  *** Listing of results directory ***
[2025-10-14 07:02:36] total 640324
[2025-10-14 07:02:36] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-14 07:02:36] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 22:00 pilot3.tar.gz
[2025-10-14 07:02:36] -rwx------. 1 boincer umatlas     36292 Oct 12 22:03 runpilot2-wrapper.sh
[2025-10-14 07:02:36] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 22:03 queuedata.json
[2025-10-14 07:02:36] -rw-r--r--. 1 boincer umatlas       100 Oct 13 18:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 07:02:36] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 18:16 run_atlas
[2025-10-14 07:02:36] -rw-r--r--. 1 boincer umatlas       105 Oct 13 18:16 job.xml
[2025-10-14 07:02:36] -rw-r--r--. 3 boincer umatlas 221768042 Oct 13 18:16 EVNT.46676267._004378.pool.root.1
[2025-10-14 07:02:36] -rw-r--r--. 3 boincer umatlas 221768042 Oct 13 18:16 ATLAS.root_0
[2025-10-14 07:02:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 18:16 start_atlas.sh
[2025-10-14 07:02:36] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 18:16 shared
[2025-10-14 07:02:36] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 18:16 input.tar.gz
[2025-10-14 07:02:36] -rw-r--r--. 1 boincer umatlas         0 Oct 13 18:16 boinc_lockfile
[2025-10-14 07:02:36] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 18:29 pandaJob.out
[2025-10-14 07:02:36] -rw-------. 1 boincer umatlas    972799 Oct 13 18:30 agis_schedconf.cvmfs.json
[2025-10-14 07:02:36] -rw-r--r--. 1 boincer umatlas      6525 Oct 14 06:54 init_data.xml
[2025-10-14 07:02:36] -rw-------. 1 boincer umatlas 196207219 Oct 14 07:00 HITS.46676269._094580.pool.root.1
[2025-10-14 07:02:36] -rw-r--r--. 1 boincer umatlas       531 Oct 14 07:01 boinc_task_state.xml
[2025-10-14 07:02:36] -rw-------. 1 boincer umatlas      1045 Oct 14 07:01 memory_monitor_summary.json
[2025-10-14 07:02:36] -rw-------. 1 boincer umatlas   1560580 Oct 14 07:01 agis_ddmendpoints.agis.ALL.json
[2025-10-14 07:02:36] -rw-------. 1 boincer umatlas    824682 Oct 14 07:01 log.46676269._094580.job.log.tgz.1
[2025-10-14 07:02:36] -rw-------. 1 boincer umatlas      7822 Oct 14 07:01 heartbeat.json
[2025-10-14 07:02:36] -rw-r--r--. 1 boincer umatlas        28 Oct 14 07:02 wrapper_checkpoint.txt
[2025-10-14 07:02:36] -rw-r--r--. 1 boincer umatlas      8192 Oct 14 07:02 boinc_mmap_file
[2025-10-14 07:02:36] -rw-------. 1 boincer umatlas        96 Oct 14 07:02 pilot_heartbeat.json
[2025-10-14 07:02:36] -rw-------. 1 boincer umatlas      4824 Oct 14 07:02 pilotlog.txt
[2025-10-14 07:02:36] -rw-------. 1 boincer umatlas   5198431 Oct 14 07:02 log.46676269._094580.job.log.1
[2025-10-14 07:02:36] -rw-------. 1 boincer umatlas       357 Oct 14 07:02 output.list
[2025-10-14 07:02:36] -rw-r--r--. 1 boincer umatlas       620 Oct 14 07:02 runtime_log
[2025-10-14 07:02:36] -rw-------. 1 boincer umatlas   6041600 Oct 14 07:02 result.tar.gz
[2025-10-14 07:02:36] -rw-r--r--. 1 boincer umatlas      8789 Oct 14 07:02 runtime_log.err
[2025-10-14 07:02:36] -rw-------. 1 boincer umatlas       783 Oct 14 07:02 13lKDmb5MS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmWUVMDmX61b6n.diag
[2025-10-14 07:02:36] -rw-r--r--. 1 boincer umatlas     23439 Oct 14 07:02 stderr.txt
[2025-10-14 07:02:36] HITS file was successfully produced:
[2025-10-14 07:02:36] -rw-------. 1 boincer umatlas 196207219 Oct 14 07:00 shared/HITS.pool.root.1
[2025-10-14 07:02:36]  *** Contents of shared directory: ***
[2025-10-14 07:02:36] total 414664
[2025-10-14 07:02:36] -rw-r--r--. 3 boincer umatlas 221768042 Oct 13 18:16 ATLAS.root_0
[2025-10-14 07:02:36] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 18:16 start_atlas.sh
[2025-10-14 07:02:36] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 18:16 input.tar.gz
[2025-10-14 07:02:36] -rw-------. 1 boincer umatlas 196207219 Oct 14 07:00 HITS.pool.root.1
[2025-10-14 07:02:36] -rw-------. 1 boincer umatlas   6041600 Oct 14 07:02 result.tar.gz
07:02:37 (3959635): run_atlas exited; CPU time 81719.588053
07:02:37 (3959635): called boinc_finish(0)

</stderr_txt>
]]>

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