Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:15 (1539090): wrapper (7.7.26015): starting
00:04:15 (1539090): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:04:15] Arguments: --nthreads 12
[2025-10-13 00:04:15] Threads: 12
[2025-10-13 00:04:15] Checking for CVMFS
[2025-10-13 00:04:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:04:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:04:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:04:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:04:17] 2.13.2.0 192096 123799 250880 151647 0 65 28082507 40960001 13135 16776704 0 106518879 99.778 65046503 36088 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:04:17] CVMFS is ok
[2025-10-13 00:04:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:04:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:04:17] Further information can be found at the LHC@home message board.
[2025-10-13 00:04:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:04:17] Checking for apptainer binary...
[2025-10-13 00:04:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:04:17] Running /usr/bin/apptainer --version
[2025-10-13 00:04:17] apptainer version 1.4.3-1.el9
[2025-10-13 00:04:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:04:18] c-210-31-2.aglt2.org
[2025-10-13 00:04:18] apptainer works
[2025-10-13 00:04:18] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:04:18] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:04:18] Starting ATLAS job with PandaID=6840969513
[2025-10-13 00:04:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:56:38]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:56:38] 2025-10-13 10:55:36,036 | INFO     | monitor loop #1387: job 0:6840969513 is in state 'finished'
[2025-10-13 06:56:38] 2025-10-13 10:55:36,037 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:56:38] 2025-10-13 10:55:36,781 | INFO     | time since job start (24603s) is within the limit (172800.0s)
[2025-10-13 06:56:38] 2025-10-13 10:55:37,032 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 06:56:38] 2025-10-13 10:55:37,036 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2472.5521428571424
[2025-10-13 06:56:38] 2025-10-13 10:55:37,049 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6840969513/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:56:38] 2025-10-13 10:55:37,050 | INFO     | extracted standard info from prmon json
[2025-10-13 06:56:38] 2025-10-13 10:55:37,050 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 06:56:38] 2025-10-13 10:55:37,050 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 06:56:38] 2025-10-13 10:55:37,051 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:56:38] 2025-10-13 10:55:37,051 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:56:38] 2025-10-13 10:55:37,073 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:56:38] 2025-10-13 10:55:37,074 | INFO     | sum of square deviations: 19995356188.85761
[2025-10-13 06:56:38] 2025-10-13 10:55:37,099 | INFO     | sum of deviations: 215128649928.85297
[2025-10-13 06:56:38] 2025-10-13 10:55:37,100 | INFO     | mean x: 1760340703.3840399
[2025-10-13 06:56:38] 2025-10-13 10:55:37,100 | INFO     | mean y: 2619901.6957605984
[2025-10-13 06:56:38] 2025-10-13 10:55:37,100 | INFO     | -- intersect: -18936763590.999706
[2025-10-13 06:56:38] 2025-10-13 10:55:37,100 | INFO     | intersect: -18936763590.999706
[2025-10-13 06:56:38] 2025-10-13 10:55:37,101 | INFO     | chi2: 4.562621113060823
[2025-10-13 06:56:38] 2025-10-13 10:55:37,102 | INFO     | sum of square deviations: 19256815457.545494
[2025-10-13 06:56:38] 2025-10-13 10:55:37,107 | INFO     | sum of deviations: 239264510345.6669
[2025-10-13 06:56:38] 2025-10-13 10:55:37,108 | INFO     | mean x: 1760340550.8939395
[2025-10-13 06:56:38] 2025-10-13 10:55:37,108 | INFO     | mean y: 2624828.777777778
[2025-10-13 06:56:38] 2025-10-13 10:55:37,108 | INFO     | -- intersect: -21869476551.631107
[2025-10-13 06:56:38] 2025-10-13 10:55:37,108 | INFO     | intersect: -21869476551.631107
[2025-10-13 06:56:38] 2025-10-13 10:55:37,109 | INFO     | chi2: 3.8639372140156745
[2025-10-13 06:56:38] 2025-10-13 10:55:37,109 | INFO     | current chi2=3.8639372140156745 (change=15.31321321082561 %)
[2025-10-13 06:56:38] 2025-10-13 10:55:37,109 | INFO     | right removable region: 395
[2025-10-13 06:56:38] 2025-10-13 10:55:37,110 | INFO     | sum of square deviations: 19256574017.959633
[2025-10-13 06:56:38] 2025-10-13 10:55:37,115 | INFO     | sum of deviations: 91097711251.52524
[2025-10-13 06:56:38] 2025-10-13 10:55:37,115 | INFO     | mean x: 1760340855.89899
[2025-10-13 06:56:38] 2025-10-13 10:55:37,116 | INFO     | mean y: 2645469.0631313133
[2025-10-13 06:56:38] 2025-10-13 10:55:37,116 | INFO     | -- intersect: -8325057207.715537
[2025-10-13 06:56:38] 2025-10-13 10:55:37,116 | INFO     | intersect: -8325057207.715537
[2025-10-13 06:56:38] 2025-10-13 10:55:37,117 | INFO     | chi2: 1.3635997039954753
[2025-10-13 06:56:38] 2025-10-13 10:55:37,117 | INFO     | current chi2=1.3635997039954753 (change=70.11367654237002 %)
[2025-10-13 06:56:38] 2025-10-13 10:55:37,118 | INFO     | sum of square deviations: 18536235320.705948
[2025-10-13 06:56:38] 2025-10-13 10:55:37,123 | INFO     | sum of deviations: 50637920171.05881
[2025-10-13 06:56:38] 2025-10-13 10:55:37,123 | INFO     | mean x: 1760341008.4117646
[2025-10-13 06:56:38] 2025-10-13 10:55:37,123 | INFO     | mean y: 2654033.1611253195
[2025-10-13 06:56:38] 2025-10-13 10:55:37,123 | INFO     | -- intersect: -4806305602.6837015
[2025-10-13 06:56:38] 2025-10-13 10:55:37,123 | INFO     | intersect: -4806305602.6837015
[2025-10-13 06:56:38] 2025-10-13 10:55:37,124 | INFO     | chi2: 1.0669648402669465
[2025-10-13 06:56:38] 2025-10-13 10:55:37,124 | INFO     | current chi2=1.0669648402669465 (change=21.75380816374195 %)
[2025-10-13 06:56:38] 2025-10-13 10:55:37,125 | INFO     | left removable region: 20
[2025-10-13 06:56:38] 2025-10-13 10:55:37,125 | INFO     | sum of square deviations: 16352469579.023994
[2025-10-13 06:56:38] 2025-10-13 10:55:37,130 | INFO     | sum of deviations: 16901622625.527992
[2025-10-13 06:56:38] 2025-10-13 10:55:37,130 | INFO     | mean x: 1760341130.456
[2025-10-13 06:56:38] 2025-10-13 10:55:37,130 | INFO     | mean y: 2672871.365333333
[2025-10-13 06:56:38] 2025-10-13 10:55:37,130 | INFO     | -- intersect: -1816784510.0033867
[2025-10-13 06:56:38] 2025-10-13 10:55:37,131 | INFO     | intersect: -1816784510.0033867
[2025-10-13 06:56:38] 2025-10-13 10:55:37,131 | INFO     | chi2: 0.012496968972399145
[2025-10-13 06:56:38] 2025-10-13 10:55:37,132 | INFO     | -- intersect: -1816784510.0033867
[2025-10-13 06:56:38] 2025-10-13 10:55:37,132 | INFO     | current memory leak: 1.03 B/s (using 375 data points, chi2=0.01)
[2025-10-13 06:56:38] 2025-10-13 10:55:37,138 | INFO     | could have reported an average CPU frequency of 2545 MHz (17 samples)
[2025-10-13 06:56:38] 2025-10-13 10:55:37,138 | INFO     | ..............................
[2025-10-13 06:56:38] 2025-10-13 10:55:37,138 | INFO     | . Timing measurements:
[2025-10-13 06:56:38] 2025-10-13 10:55:37,138 | INFO     | . get job = 0 s
[2025-10-13 06:56:38] 2025-10-13 10:55:37,138 | INFO     | . initial setup = 6 s
[2025-10-13 06:56:38] 2025-10-13 10:55:37,138 | INFO     | . payload setup = 49 s
[2025-10-13 06:56:38] 2025-10-13 10:55:37,139 | INFO     | . stage-in = 0 s
[2025-10-13 06:56:38] 2025-10-13 10:55:37,139 | INFO     | . payload execution = 24450 s
[2025-10-13 06:56:38] 2025-10-13 10:55:37,139 | INFO     | . stage-out = 2 s
[2025-10-13 06:56:38] 2025-10-13 10:55:37,139 | INFO     | . log creation = 0 s
[2025-10-13 06:56:38] 2025-10-13 10:55:37,139 | INFO     | ..............................
[2025-10-13 06:56:38] 2025-10-13 10:55:37,565 | INFO     | 
[2025-10-13 06:56:38] 2025-10-13 10:55:37,566 | INFO     | job summary report
[2025-10-13 06:56:38] 2025-10-13 10:55:37,566 | INFO     | --------------------------------------------------
[2025-10-13 06:56:38] 2025-10-13 10:55:37,566 | INFO     | PanDA job id: 6840969513
[2025-10-13 06:56:38] 2025-10-13 10:55:37,566 | INFO     | task id: 46676269
[2025-10-13 06:56:38] 2025-10-13 10:55:37,566 | INFO     | errors: (none)
[2025-10-13 06:56:38] 2025-10-13 10:55:37,569 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:56:38] 2025-10-13 10:55:37,569 | INFO     | pilot state: finished 
[2025-10-13 06:56:38] 2025-10-13 10:55:37,569 | INFO     | transexitcode: 0
[2025-10-13 06:56:38] 2025-10-13 10:55:37,569 | INFO     | exeerrorcode: 0
[2025-10-13 06:56:38] 2025-10-13 10:55:37,569 | INFO     | exeerrordiag: 
[2025-10-13 06:56:38] 2025-10-13 10:55:37,569 | INFO     | exitcode: 0
[2025-10-13 06:56:38] 2025-10-13 10:55:37,570 | INFO     | exitmsg: OK
[2025-10-13 06:56:38] 2025-10-13 10:55:37,570 | INFO     | cpuconsumptiontime: 47485 s
[2025-10-13 06:56:38] 2025-10-13 10:55:37,570 | INFO     | nevents: 400
[2025-10-13 06:56:38] 2025-10-13 10:55:37,570 | INFO     | neventsw: 0
[2025-10-13 06:56:38] 2025-10-13 10:55:37,570 | INFO     | pid: 1562641
[2025-10-13 06:56:38] 2025-10-13 10:55:37,570 | INFO     | pgrp: 1562641
[2025-10-13 06:56:38] 2025-10-13 10:55:37,570 | INFO     | corecount: 12
[2025-10-13 06:56:38] 2025-10-13 10:55:37,570 | INFO     | event service: False
[2025-10-13 06:56:38] 2025-10-13 10:55:37,571 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348913, 13: 2348913, 24: 2348969, 35: 2348997, 38: 2349415, 46: 2349443, 24504: 2384493, 24508: 2393491, 24511: 2393547, 24523:
[2025-10-13 06:56:38] 2025-10-13 10:55:37,571 | INFO     | --------------------------------------------------
[2025-10-13 06:56:38] 2025-10-13 10:55:37,571 | INFO     | 
[2025-10-13 06:56:38] 2025-10-13 10:55:37,571 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 06:56:38] 2025-10-13 10:55:37,599 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:56:38] 2025-10-13 10:55:37,600 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:56:38] 2025-10-13 10:55:37,600 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:56:38] 2025-10-13 10:55:37,600 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:56:38] 2025-10-13 10:55:37,600 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:56:38] 2025-10-13 10:55:37,601 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:56:38] 2025-10-13 10:55:37,602 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:56:38] 2025-10-13 10:55:37,602 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:56:38] 2025-10-13 10:55:37,602 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:56:38] 2025-10-13 10:55:37,602 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:56:38] 2025-10-13 10:55:37,602 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:56:38] 2025-10-13 10:55:37,602 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:56:38] 2025-10-13 10:55:37,602 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:56:38] 2025-10-13 10:55:37,602 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:56:38] 2025-10-13 10:55:37,603 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:56:38] 2025-10-13 10:55:37,603 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:56:38] 2025-10-13 10:55:37,603 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:56:38] 2025-10-13 10:55:37,603 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:56:38] 2025-10-13 10:55:37,603 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:56:38] 2025-10-13 10:55:37,604 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:56:38] 2025-10-13 10:55:37,605 | INFO     | job 6840969513 has completed (purged errors)
[2025-10-13 06:56:38] 2025-10-13 10:55:37,606 | INFO     | overall cleanup function is called
[2025-10-13 06:56:38] 2025-10-13 10:55:38,616 | INFO     | --- collectZombieJob: --- 10, [1562641]
[2025-10-13 06:56:38] 2025-10-13 10:55:38,617 | INFO     | zombie collector waiting for pid 1562641
[2025-10-13 06:56:38] 2025-10-13 10:55:38,617 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:56:38] 2025-10-13 10:55:38,618 | INFO     | collected zombie processes
[2025-10-13 06:56:38] 2025-10-13 10:55:38,618 | INFO     | will attempt to kill all subprocesses of pid=1562641
[2025-10-13 06:56:38] 2025-10-13 10:55:39,033 | INFO     | process IDs to be killed: [1562641] (in reverse order)
[2025-10-13 06:56:38] 2025-10-13 10:55:39,134 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:56:38] 2025-10-13 10:55:39,135 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:56:38] 2025-10-13 10:55:39,145 | INFO     | did not find any defunct processes belonging to 1562641
[2025-10-13 06:56:38] 2025-10-13 10:55:39,156 | INFO     | did not find any defunct processes belonging to 1562641
[2025-10-13 06:56:38] 2025-10-13 10:55:39,157 | INFO     | ready for new job
[2025-10-13 06:56:38] 2025-10-13 10:55:39,157 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:56:38] 2025-10-13 10:55:39,160 | INFO     | ***************************************
[2025-10-13 06:56:38] 2025-10-13 10:55:39,160 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:56:38] 2025-10-13 10:55:39,160 | INFO     | ***************************************
[2025-10-13 06:56:38] 2025-10-13 10:55:39,160 | INFO     | 
[2025-10-13 06:56:38] 2025-10-13 10:55:39,164 | INFO     | architecture information:
[2025-10-13 06:56:38] 2025-10-13 10:55:39,165 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:56:38] 2025-10-13 10:55:39,201 | INFO     | cat /etc/os-release:
[2025-10-13 06:56:38] NAME="CentOS Linux"
[2025-10-13 06:56:38] VERSION="7 (Core)"
[2025-10-13 06:56:38] ID="centos"
[2025-10-13 06:56:38] ID_LIKE="rhel fedora"
[2025-10-13 06:56:38] VERSION_ID="7"
[2025-10-13 06:56:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:56:38] ANSI_COLOR="0;31"
[2025-10-13 06:56:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:56:38] HOME_URL="https://www.centos.org/"
[2025-10-13 06:56:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:56:38] 
[2025-10-13 06:56:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:56:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:56:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:56:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:56:38] 
[2025-10-13 06:56:38] 2025-10-13 10:55:39,202 | INFO     | ***************************************
[2025-10-13 06:56:38] 2025-10-13 10:55:39,706 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 06:56:38] 2025-10-13 10:55:39,807 | INFO     | sufficient remaining disk space (73093087232 B)
[2025-10-13 06:56:38] 2025-10-13 10:55:39,807 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:56:38] 2025-10-13 10:55:39,808 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:56:38] 2025-10-13 10:55:39,808 | INFO     | update_server=False
[2025-10-13 06:56:38] 2025-10-13 10:55:39,808 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:56:38] 2025-10-13 10:55:39,808 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:56:38] 2025-10-13 10:55:39,808 | INFO     | aborting loop
[2025-10-13 06:56:38] 2025-10-13 10:55:39,809 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:56:38] 2025-10-13 10:55:40,267 | INFO     | all data control threads have been joined
[2025-10-13 06:56:38] 2025-10-13 10:55:40,460 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:56:38] 2025-10-13 10:55:40,570 | INFO     | all job control threads have been joined
[2025-10-13 06:56:38] 2025-10-13 10:55:40,819 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:56:38] 2025-10-13 10:55:40,821 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:56:38] 2025-10-13 10:55:40,874 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:56:38] 2025-10-13 10:55:40,884 | INFO     | all payload control threads have been joined
[2025-10-13 06:56:38] 2025-10-13 10:55:41,273 | INFO     | [data] control thread has finished
[2025-10-13 06:56:38] 2025-10-13 10:55:41,320 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:56:38] 2025-10-13 10:55:41,367 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:56:38] 2025-10-13 10:55:41,577 | INFO     | [job] control thread has finished
[2025-10-13 06:56:38] 2025-10-13 10:55:41,683 | INFO     | [job] validate thread has finished
[2025-10-13 06:56:38] 2025-10-13 10:55:41,771 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:56:38] 2025-10-13 10:55:41,890 | INFO     | [payload] control thread has finished
[2025-10-13 06:56:38] 2025-10-13 10:55:41,979 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:56:38] 2025-10-13 10:55:42,042 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:56:38] 2025-10-13 10:55:42,314 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:56:38] 2025-10-13 10:55:42,406 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:56:38] 2025-10-13 10:55:42,466 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:56:38] 2025-10-13 10:55:43,413 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:56:38] 2025-10-13 10:55:43,816 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:56:38] 2025-10-13 10:56:10,503 | INFO     | PID=1547025 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 06:56:38] 2025-10-13 10:56:10,503 | INFO     | .. there are 10 such processes running
[2025-10-13 06:56:38] 2025-10-13 10:56:10,505 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:56:38] 2025-10-13 10:56:10,505 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:56:38] 2025-10-13 10:56:10,505 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:56:38] 2025-10-13 10:56:20,761 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:56:38] 2025-10-13 10:56:21,670 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139698227021632)>', '<ExcThread(monitor, started 139697871369984)>']
[2025-10-13 06:56:38] 2025-10-13 10:56:22,573 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:56:38] 2025-10-13 10:56:22,574 | INFO     | [monitor] control thread has ended
[2025-10-13 06:56:38] 2025-10-13 10:56:26,708 | INFO     | all workflow threads have been joined
[2025-10-13 06:56:38] 2025-10-13 10:56:26,709 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:56:38] 2025-10-13 10:56:26,709 | INFO     | traces error code: 0
[2025-10-13 06:56:38] 2025-10-13 10:56:26,709 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:56:38] 2025-10-13 10:56:27,034 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:56:38] 2025-10-13 10:56:27,037 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:56:38] 2025-10-13 10:56:27,042 [wrapper] pilotpid: 1547025
[2025-10-13 06:56:38] 2025-10-13 10:56:27,045 [wrapper] Pilot exit status: 0
[2025-10-13 06:56:38] 2025-10-13 10:56:27,062 [wrapper] pandaids: 6840969513
[2025-10-13 06:56:38] 2025-10-13 10:56:27,129 [wrapper] cleanup supervisor_pilot 2192595 1547026
[2025-10-13 06:56:38] 2025-10-13 10:56:27,133 [wrapper] Test setup, not cleaning
[2025-10-13 06:56:38] 2025-10-13 10:56:27,138 [wrapper] apfmon messages muted
[2025-10-13 06:56:38] 2025-10-13 10:56:27,159 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:56:38] 2025-10-13 10:56:27,166 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:56:38]  *** Error codes and diagnostics ***
[2025-10-13 06:56:38]     "exeErrorCode": 0,
[2025-10-13 06:56:38]     "exeErrorDiag": "",
[2025-10-13 06:56:38]     "pilotErrorCode": 0,
[2025-10-13 06:56:38]     "pilotErrorDiag": "",
[2025-10-13 06:56:38]  *** Listing of results directory ***
[2025-10-13 06:56:38] total 412348
[2025-10-13 06:56:38] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 19:11 pilot3.tar.gz
[2025-10-13 06:56:38] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:40 queuedata.json
[2025-10-13 06:56:38] -rwx------. 1 boincer umatlas     36292 Oct 12 19:40 runpilot2-wrapper.sh
[2025-10-13 06:56:38] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:56:38] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:04 run_atlas
[2025-10-13 06:56:38] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:04 job.xml
[2025-10-13 06:56:38] -rw-r--r--. 2 boincer umatlas 222045623 Oct 13 00:04 EVNT.46676267._004663.pool.root.1
[2025-10-13 06:56:38] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:04 start_atlas.sh
[2025-10-13 06:56:38] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:04 shared
[2025-10-13 06:56:38] -rw-r--r--. 2 boincer umatlas    569684 Oct 13 00:04 input.tar.gz
[2025-10-13 06:56:38] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:04 boinc_lockfile
[2025-10-13 06:56:38] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:04 pandaJob.out
[2025-10-13 06:56:38] -rw-------. 1 boincer umatlas    974373 Oct 13 00:05 agis_schedconf.cvmfs.json
[2025-10-13 06:56:38] drwx------. 5 boincer umatlas      4096 Oct 13 00:05 pilot3
[2025-10-13 06:56:38] -rw-------. 1 boincer umatlas 189063835 Oct 13 06:54 HITS.46676269._092359.pool.root.1
[2025-10-13 06:56:38] -rw-r--r--. 1 boincer umatlas       531 Oct 13 06:54 boinc_task_state.xml
[2025-10-13 06:56:38] -rw-------. 1 boincer umatlas      1043 Oct 13 06:55 memory_monitor_summary.json
[2025-10-13 06:56:38] -rw-------. 1 boincer umatlas   1560580 Oct 13 06:55 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:56:38] -rw-------. 1 boincer umatlas    649361 Oct 13 06:55 log.46676269._092359.job.log.tgz.1
[2025-10-13 06:56:38] -rw-r--r--. 1 boincer umatlas      6842 Oct 13 06:55 init_data.xml
[2025-10-13 06:56:38] -rw-------. 1 boincer umatlas        95 Oct 13 06:55 pilot_heartbeat.json
[2025-10-13 06:56:38] -rw-------. 1 boincer umatlas      7834 Oct 13 06:55 heartbeat.json
[2025-10-13 06:56:38] -rw-------. 1 boincer umatlas      4824 Oct 13 06:56 pilotlog.txt
[2025-10-13 06:56:38] -rw-------. 1 boincer umatlas   2967783 Oct 13 06:56 log.46676269._092359.job.log.1
[2025-10-13 06:56:38] -rw-------. 1 boincer umatlas       357 Oct 13 06:56 output.list
[2025-10-13 06:56:38] -rw-r--r--. 1 boincer umatlas       620 Oct 13 06:56 runtime_log
[2025-10-13 06:56:38] -rw-------. 1 boincer umatlas   3635200 Oct 13 06:56 result.tar.gz
[2025-10-13 06:56:38] -rw-r--r--. 1 boincer umatlas      8716 Oct 13 06:56 runtime_log.err
[2025-10-13 06:56:38] -rw-------. 1 boincer umatlas       659 Oct 13 06:56 LWZLDm3qKS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmGIVMDm9ILEUn.diag
[2025-10-13 06:56:38] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 06:56 boinc_mmap_file
[2025-10-13 06:56:38] -rw-r--r--. 1 boincer umatlas        28 Oct 13 06:56 wrapper_checkpoint.txt
[2025-10-13 06:56:38] -rw-r--r--. 1 boincer umatlas     21268 Oct 13 06:56 stderr.txt
[2025-10-13 06:56:38] HITS file was successfully produced:
[2025-10-13 06:56:38] -rw-------. 1 boincer umatlas 189063835 Oct 13 06:54 shared/HITS.pool.root.1
[2025-10-13 06:56:38]  *** Contents of shared directory: ***
[2025-10-13 06:56:38] total 405612
[2025-10-13 06:56:38] -rw-r--r--. 2 boincer umatlas 222045623 Oct 13 00:04 ATLAS.root_0
[2025-10-13 06:56:38] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:04 start_atlas.sh
[2025-10-13 06:56:38] -rw-r--r--. 2 boincer umatlas    569684 Oct 13 00:04 input.tar.gz
[2025-10-13 06:56:38] -rw-------. 1 boincer umatlas 189063835 Oct 13 06:54 HITS.pool.root.1
[2025-10-13 06:56:38] -rw-------. 1 boincer umatlas   3635200 Oct 13 06:56 result.tar.gz
06:56:40 (1539090): run_atlas exited; CPU time 48139.414631
06:56:40 (1539090): called boinc_finish(0)

</stderr_txt>
]]>

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