Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:45 (1092323): wrapper (7.7.26015): starting
00:03:45 (1092323): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 00:03:45] Arguments: --nthreads 8
[2025-10-13 00:03:45] Threads: 8
[2025-10-13 00:03:45] Checking for CVMFS
[2025-10-13 00:03:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:03:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:03:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:03:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:03:45] 2.13.2.0 3683012 13723 147488 151647 1 188 38173293 40960000 6745 16776704 0 158975737 99.871 55103794 32596 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:03:45] CVMFS is ok
[2025-10-13 00:03:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:03:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:03:45] Further information can be found at the LHC@home message board.
[2025-10-13 00:03:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:03:45] Checking for apptainer binary...
[2025-10-13 00:03:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:03:45] Running /usr/bin/apptainer --version
[2025-10-13 00:03:45] apptainer version 1.4.3-1.el9
[2025-10-13 00:03:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:03:45] c8-7-4.aglt2.org
[2025-10-13 00:03:45] apptainer works
[2025-10-13 00:03:45] Set ATHENA_PROC_NUMBER=8
[2025-10-13 00:03:45] Set ATHENA_CORE_NUMBER=8
[2025-10-13 00:03:45] Starting ATLAS job with PandaID=6840969519
[2025-10-13 00:03:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 00:46:11]  *** The last 200 lines of the pilot log: ***
[2025-10-13 00:46:11]  lfn=log.46676269._092365.job.log.tgz.1
[2025-10-13 00:46:11]  mtime=0
[2025-10-13 00:46:11]  protocol_id=None
[2025-10-13 00:46:11]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 00:46:11]  replicas=None
[2025-10-13 00:46:11]  scope=mc23_13p6TeV
[2025-10-13 00:46:11]  status=None
[2025-10-13 00:46:11]  status_code=0
[2025-10-13 00:46:11]  storage_token=
[2025-10-13 00:46:11]  surl=/tmp/boinchome/slots/12/PanDA_Pilot-6840969519/log.46676269._092365.job.log.tgz.1
[2025-10-13 00:46:11]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/f6/log.46676269._092365.job.log.tgz.1
[2025-10-13 00:46:11]  workdir=None
[2025-10-13 00:46:11] ]
[2025-10-13 00:46:11] 2025-10-13 04:45:34,464 | INFO     | transferring file log.46676269._092365.job.log.tgz.1 from /tmp/boinchome/slots/12/PanDA_Pilot-6840969519/log.46676269._092365.job.log.tgz.1 to /tmp/boinchome/slots
[2025-10-13 00:46:11] 2025-10-13 04:45:34,464 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/12/PanDA_Pilot-6840969519/log.46676269._092365.job.log.tgz.1 /tmp/boinchome/slots/12/log.46676269._092365.j
[2025-10-13 00:46:11] 2025-10-13 04:45:34,475 | INFO     | adding to output.list: log.46676269._092365.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/f6/log.46676269._092365.job.log.tg
[2025-10-13 00:46:11] 2025-10-13 04:45:34,476 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 00:46:11] 2025-10-13 04:45:34,476 | INFO     | summary of transferred files:
[2025-10-13 00:46:11] 2025-10-13 04:45:34,476 | INFO     |  -- lfn=log.46676269._092365.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 00:46:11] 2025-10-13 04:45:34,476 | INFO     | stage-out finished correctly
[2025-10-13 00:46:11] 2025-10-13 04:45:36,089 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 00:46:11] 2025-10-13 04:45:36,286 | INFO     | time since job start (2502s) is within the limit (172800.0s)
[2025-10-13 00:46:11] 2025-10-13 04:45:36,465 | INFO     | job 6840969519 has state=finished
[2025-10-13 00:46:11] 2025-10-13 04:45:36,465 | INFO     | preparing for final server update for job 6840969519 in state='finished'
[2025-10-13 00:46:11] 2025-10-13 04:45:36,486 | INFO     | monitor loop #187: job 0:6840969519 is in state 'finished'
[2025-10-13 00:46:11] 2025-10-13 04:45:36,486 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 00:46:11] 2025-10-13 04:45:36,504 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-13 00:46:11] 2025-10-13 04:45:36,504 | INFO     | this job has now completed (state=finished)
[2025-10-13 00:46:11] 2025-10-13 04:45:36,504 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 00:46:11] 2025-10-13 04:45:36,504 | INFO     | log transfer has been attempted: DONE
[2025-10-13 00:46:11] 2025-10-13 04:45:36,504 | INFO     | job 6840969519 has finished - writing final server update
[2025-10-13 00:46:11] 2025-10-13 04:45:36,505 | INFO     | total number of processed events: 400 (read)
[2025-10-13 00:46:11] 2025-10-13 04:45:36,505 | INFO     | executing command: lscpu
[2025-10-13 00:46:11] 2025-10-13 04:45:36,555 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 00:46:11] 2025-10-13 04:45:38,291 | INFO     | time since job start (2504s) is within the limit (172800.0s)
[2025-10-13 00:46:11] 2025-10-13 04:45:38,942 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 00:46:11] 2025-10-13 04:45:38,958 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3301.7134765624924
[2025-10-13 00:46:11] 2025-10-13 04:45:38,966 | INFO     | using path: /tmp/boinchome/slots/12/PanDA_Pilot-6840969519/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 00:46:11] 2025-10-13 04:45:38,966 | INFO     | extracted standard info from prmon json
[2025-10-13 00:46:11] 2025-10-13 04:45:38,966 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 00:46:11] 2025-10-13 04:45:38,966 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 00:46:11] 2025-10-13 04:45:38,967 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 00:46:11] 2025-10-13 04:45:38,967 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 00:46:11] 2025-10-13 04:45:38,967 | INFO     | fitting pss+swap vs Time
[2025-10-13 00:46:11] 2025-10-13 04:45:38,967 | INFO     | sum of square deviations: 12176972.5
[2025-10-13 00:46:11] 2025-10-13 04:45:38,967 | INFO     | sum of deviations: 337727262.5
[2025-10-13 00:46:11] 2025-10-13 04:45:38,967 | INFO     | mean x: 1760329569.5
[2025-10-13 00:46:11] 2025-10-13 04:45:38,967 | INFO     | mean y: 2173526.382352941
[2025-10-13 00:46:11] 2025-10-13 04:45:38,967 | INFO     | -- intersect: -48820412432.89763
[2025-10-13 00:46:11] 2025-10-13 04:45:38,967 | INFO     | intersect: -48820412432.89763
[2025-10-13 00:46:11] 2025-10-13 04:45:38,967 | INFO     | chi2: 0.0019516813911240579
[2025-10-13 00:46:11] 2025-10-13 04:45:38,967 | INFO     | -- intersect: -48820412432.89763
[2025-10-13 00:46:11] 2025-10-13 04:45:38,967 | INFO     | current memory leak: 27.73 B/s (using 34 data points, chi2=0.00)
[2025-10-13 00:46:11] 2025-10-13 04:45:38,968 | INFO     | could have reported an average CPU frequency of 3513 MHz (5 samples)
[2025-10-13 00:46:11] 2025-10-13 04:45:38,968 | INFO     | ..............................
[2025-10-13 00:46:11] 2025-10-13 04:45:38,968 | INFO     | . Timing measurements:
[2025-10-13 00:46:11] 2025-10-13 04:45:38,968 | INFO     | . get job = 0 s
[2025-10-13 00:46:11] 2025-10-13 04:45:38,968 | INFO     | . initial setup = 2 s
[2025-10-13 00:46:11] 2025-10-13 04:45:38,968 | INFO     | . payload setup = 4 s
[2025-10-13 00:46:11] 2025-10-13 04:45:38,968 | INFO     | . stage-in = 0 s
[2025-10-13 00:46:11] 2025-10-13 04:45:38,968 | INFO     | . payload execution = 2476 s
[2025-10-13 00:46:11] 2025-10-13 04:45:38,968 | INFO     | . stage-out = 0 s
[2025-10-13 00:46:11] 2025-10-13 04:45:38,968 | INFO     | . log creation = 0 s
[2025-10-13 00:46:11] 2025-10-13 04:45:38,968 | INFO     | ..............................
[2025-10-13 00:46:11] 2025-10-13 04:45:38,998 | INFO     | 
[2025-10-13 00:46:11] 2025-10-13 04:45:38,998 | INFO     | job summary report
[2025-10-13 00:46:11] 2025-10-13 04:45:38,998 | INFO     | --------------------------------------------------
[2025-10-13 00:46:11] 2025-10-13 04:45:38,998 | INFO     | PanDA job id: 6840969519
[2025-10-13 00:46:11] 2025-10-13 04:45:38,998 | INFO     | task id: 46676269
[2025-10-13 00:46:11] 2025-10-13 04:45:38,998 | INFO     | errors: (none)
[2025-10-13 00:46:11] 2025-10-13 04:45:38,998 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 00:46:11] 2025-10-13 04:45:38,998 | INFO     | pilot state: finished 
[2025-10-13 00:46:11] 2025-10-13 04:45:38,998 | INFO     | transexitcode: 0
[2025-10-13 00:46:11] 2025-10-13 04:45:38,998 | INFO     | exeerrorcode: 0
[2025-10-13 00:46:11] 2025-10-13 04:45:38,998 | INFO     | exeerrordiag: 
[2025-10-13 00:46:11] 2025-10-13 04:45:38,998 | INFO     | exitcode: 0
[2025-10-13 00:46:11] 2025-10-13 04:45:38,998 | INFO     | exitmsg: OK
[2025-10-13 00:46:11] 2025-10-13 04:45:38,998 | INFO     | cpuconsumptiontime: 18390 s
[2025-10-13 00:46:11] 2025-10-13 04:45:38,998 | INFO     | nevents: 400
[2025-10-13 00:46:11] 2025-10-13 04:45:38,998 | INFO     | neventsw: 0
[2025-10-13 00:46:11] 2025-10-13 04:45:38,999 | INFO     | pid: 1130276
[2025-10-13 00:46:11] 2025-10-13 04:45:38,999 | INFO     | pgrp: 1130276
[2025-10-13 00:46:11] 2025-10-13 04:45:38,999 | INFO     | corecount: 8
[2025-10-13 00:46:11] 2025-10-13 04:45:38,999 | INFO     | event service: False
[2025-10-13 00:46:11] 2025-10-13 04:45:38,999 | INFO     | sizes: {0: 2348858, 4: 2349120, 11: 2349148, 2485: 2374410, 2486: 2383410, 2487: 2383466, 2490: 2383820}
[2025-10-13 00:46:11] 2025-10-13 04:45:38,999 | INFO     | --------------------------------------------------
[2025-10-13 00:46:11] 2025-10-13 04:45:38,999 | INFO     | 
[2025-10-13 00:46:11] 2025-10-13 04:45:38,999 | INFO     | executing command: ls -lF /tmp/boinchome/slots/12
[2025-10-13 00:46:11] 2025-10-13 04:45:39,010 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 00:46:11] 2025-10-13 04:45:39,010 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 00:46:11] 2025-10-13 04:45:39,010 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 00:46:11] 2025-10-13 04:45:39,010 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 00:46:11] 2025-10-13 04:45:39,010 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 00:46:11] 2025-10-13 04:45:39,010 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 00:46:11] 2025-10-13 04:45:39,010 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 00:46:11] 2025-10-13 04:45:39,010 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 00:46:11] 2025-10-13 04:45:39,010 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 00:46:11] 2025-10-13 04:45:39,010 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 00:46:11] 2025-10-13 04:45:39,010 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 00:46:11] 2025-10-13 04:45:39,010 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 00:46:11] 2025-10-13 04:45:39,010 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 00:46:11] 2025-10-13 04:45:39,010 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 00:46:11] 2025-10-13 04:45:39,010 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 00:46:11] 2025-10-13 04:45:39,010 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 00:46:11] 2025-10-13 04:45:39,010 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 00:46:11] 2025-10-13 04:45:39,010 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 00:46:11] 2025-10-13 04:45:39,010 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 00:46:11] 2025-10-13 04:45:39,010 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 00:46:11] 2025-10-13 04:45:39,010 | INFO     | job 6840969519 has completed (purged errors)
[2025-10-13 00:46:11] 2025-10-13 04:45:39,010 | INFO     | overall cleanup function is called
[2025-10-13 00:46:11] 2025-10-13 04:45:40,017 | INFO     | --- collectZombieJob: --- 10, [1130276]
[2025-10-13 00:46:11] 2025-10-13 04:45:40,017 | INFO     | zombie collector waiting for pid 1130276
[2025-10-13 00:46:11] 2025-10-13 04:45:40,018 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 00:46:11] 2025-10-13 04:45:40,018 | INFO     | collected zombie processes
[2025-10-13 00:46:11] 2025-10-13 04:45:40,018 | INFO     | will attempt to kill all subprocesses of pid=1130276
[2025-10-13 00:46:11] 2025-10-13 04:45:40,225 | INFO     | process IDs to be killed: [1130276] (in reverse order)
[2025-10-13 00:46:11] 2025-10-13 04:45:40,307 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 00:46:11] 2025-10-13 04:45:40,307 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 00:46:11] 2025-10-13 04:45:40,317 | INFO     | did not find any defunct processes belonging to 1130276
[2025-10-13 00:46:11] 2025-10-13 04:45:40,325 | INFO     | did not find any defunct processes belonging to 1130276
[2025-10-13 00:46:11] 2025-10-13 04:45:40,325 | INFO     | ready for new job
[2025-10-13 00:46:11] 2025-10-13 04:45:40,325 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 00:46:11] 2025-10-13 04:45:40,326 | INFO     | ***************************************
[2025-10-13 00:46:11] 2025-10-13 04:45:40,326 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 00:46:11] 2025-10-13 04:45:40,326 | INFO     | ***************************************
[2025-10-13 00:46:11] 2025-10-13 04:45:40,326 | INFO     | 
[2025-10-13 00:46:11] 2025-10-13 04:45:40,342 | INFO     | architecture information:
[2025-10-13 00:46:11] 2025-10-13 04:45:40,342 | INFO     | executing command: cat /etc/os-release
[2025-10-13 00:46:11] 2025-10-13 04:45:40,352 | INFO     | cat /etc/os-release:
[2025-10-13 00:46:11] NAME="CentOS Linux"
[2025-10-13 00:46:11] VERSION="7 (Core)"
[2025-10-13 00:46:11] ID="centos"
[2025-10-13 00:46:11] ID_LIKE="rhel fedora"
[2025-10-13 00:46:11] VERSION_ID="7"
[2025-10-13 00:46:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 00:46:11] ANSI_COLOR="0;31"
[2025-10-13 00:46:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 00:46:11] HOME_URL="https://www.centos.org/"
[2025-10-13 00:46:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 00:46:11] 
[2025-10-13 00:46:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 00:46:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 00:46:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 00:46:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 00:46:11] 
[2025-10-13 00:46:11] 2025-10-13 04:45:40,352 | INFO     | ***************************************
[2025-10-13 00:46:11] 2025-10-13 04:45:40,855 | INFO     | executing command: df -mP /tmp/boinchome/slots/12
[2025-10-13 00:46:11] 2025-10-13 04:45:40,865 | INFO     | sufficient remaining disk space (167354826752 B)
[2025-10-13 00:46:11] 2025-10-13 04:45:40,865 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 00:46:11] 2025-10-13 04:45:40,865 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 00:46:11] 2025-10-13 04:45:40,865 | INFO     | update_server=False
[2025-10-13 00:46:11] 2025-10-13 04:45:40,865 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 00:46:11] 2025-10-13 04:45:40,865 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:46:11] 2025-10-13 04:45:40,865 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 00:46:11] 2025-10-13 04:45:40,865 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 00:46:11] 2025-10-13 04:45:40,866 | INFO     | aborting loop
[2025-10-13 00:46:11] 2025-10-13 04:45:41,240 | INFO     | all data control threads have been joined
[2025-10-13 00:46:11] 2025-10-13 04:45:41,352 | INFO     | all payload control threads have been joined
[2025-10-13 00:46:11] 2025-10-13 04:45:41,467 | INFO     | all job control threads have been joined
[2025-10-13 00:46:11] 2025-10-13 04:45:41,870 | INFO     | [job] retrieve thread has finished
[2025-10-13 00:46:11] 2025-10-13 04:45:41,871 | INFO     | [job] queue monitor thread has finished
[2025-10-13 00:46:11] 2025-10-13 04:45:41,871 | INFO     | [job] job monitor thread has finished
[2025-10-13 00:46:11] 2025-10-13 04:45:42,124 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 00:46:11] 2025-10-13 04:45:42,153 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 00:46:11] 2025-10-13 04:45:42,245 | INFO     | [data] control thread has finished
[2025-10-13 00:46:11] 2025-10-13 04:45:42,271 | INFO     | [job] validate thread has finished
[2025-10-13 00:46:11] 2025-10-13 04:45:42,358 | INFO     | [payload] control thread has finished
[2025-10-13 00:46:11] 2025-10-13 04:45:42,472 | INFO     | [job] control thread has finished
[2025-10-13 00:46:11] 2025-10-13 04:45:42,493 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 00:46:11] 2025-10-13 04:45:42,528 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 00:46:11] 2025-10-13 04:45:42,809 | INFO     | [payload] failed_post thread has finished
[2025-10-13 00:46:11] 2025-10-13 04:45:42,871 | INFO     | [data] copytool_out thread has finished
[2025-10-13 00:46:11] 2025-10-13 04:45:43,161 | INFO     | [payload] validate_post thread has finished
[2025-10-13 00:46:11] 2025-10-13 04:45:43,319 | INFO     | [data] copytool_in thread has finished
[2025-10-13 00:46:11] 2025-10-13 04:45:46,130 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 00:46:11] 2025-10-13 04:45:50,937 | INFO     | job.realtimelogging is not enabled
[2025-10-13 00:46:11] 2025-10-13 04:45:51,941 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 00:46:11] 2025-10-13 04:45:57,328 | INFO     | [monitor] cgroup control has ended
[2025-10-13 00:46:11] 2025-10-13 04:45:59,183 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140620463363904)>', '<ExcThread(monitor, started 140619829729024)>']
[2025-10-13 00:46:11] 2025-10-13 04:46:04,202 | INFO     | all workflow threads have been joined
[2025-10-13 00:46:11] 2025-10-13 04:46:04,202 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 00:46:11] 2025-10-13 04:46:04,202 | INFO     | traces error code: 0
[2025-10-13 00:46:11] 2025-10-13 04:46:04,202 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 00:46:11] 2025-10-13 04:46:11,647 | INFO     | PID=1100615 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 00:46:11] 2025-10-13 04:46:11,647 | INFO     | .. there are 8 such processes running
[2025-10-13 00:46:11] 2025-10-13 04:46:11,647 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 00:46:11] 2025-10-13 04:46:11,647 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 00:46:11] 2025-10-13 04:46:11,647 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 00:46:11] 2025-10-13 04:46:11,647 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 00:46:11] 2025-10-13 04:46:11,647 | INFO     | [monitor] control thread has ended
[2025-10-13 00:46:11] 2025-10-13 04:46:11,703 [wrapper] ==== pilot stdout END ====
[2025-10-13 00:46:11] 2025-10-13 04:46:11,705 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 00:46:11] 2025-10-13 04:46:11,707 [wrapper] pilotpid: 1100615
[2025-10-13 00:46:11] 2025-10-13 04:46:11,708 [wrapper] Pilot exit status: 0
[2025-10-13 00:46:11] 2025-10-13 04:46:11,713 [wrapper] pandaids: 6840969519
[2025-10-13 00:46:11] 2025-10-13 04:46:11,781 [wrapper] cleanup supervisor_pilot 1252044 1100617
[2025-10-13 00:46:11] 2025-10-13 04:46:11,783 [wrapper] Test setup, not cleaning
[2025-10-13 00:46:11] 2025-10-13 04:46:11,785 [wrapper] apfmon messages muted
[2025-10-13 00:46:11] 2025-10-13 04:46:11,787 [wrapper] ==== wrapper stdout END ====
[2025-10-13 00:46:11] 2025-10-13 04:46:11,789 [wrapper] ==== wrapper stderr END ====
[2025-10-13 00:46:11]  *** Error codes and diagnostics ***
[2025-10-13 00:46:11]     "exeErrorCode": 0,
[2025-10-13 00:46:11]     "exeErrorDiag": "",
[2025-10-13 00:46:11]     "pilotErrorCode": 0,
[2025-10-13 00:46:11]     "pilotErrorDiag": "",
[2025-10-13 00:46:11]  *** Listing of results directory ***
[2025-10-13 00:46:11] total 416316
[2025-10-13 00:46:11] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 19:11 pilot3.tar.gz
[2025-10-13 00:46:11] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:40 queuedata.json
[2025-10-13 00:46:11] -rwx------. 1 boincer umatlas     36292 Oct 12 19:40 runpilot2-wrapper.sh
[2025-10-13 00:46:11] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 00:46:11] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:03 run_atlas
[2025-10-13 00:46:11] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:03 job.xml
[2025-10-13 00:46:11] -rw-r--r--. 2 boincer umatlas 222045623 Oct 13 00:03 EVNT.46676267._004663.pool.root.1
[2025-10-13 00:46:11] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:03 shared
[2025-10-13 00:46:11] -rw-r--r--. 2 boincer umatlas    569683 Oct 13 00:03 input.tar.gz
[2025-10-13 00:46:11] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:03 start_atlas.sh
[2025-10-13 00:46:11] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:03 boinc_lockfile
[2025-10-13 00:46:11] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:03 pandaJob.out
[2025-10-13 00:46:11] -rw-------. 1 boincer umatlas    974373 Oct 13 00:03 agis_schedconf.cvmfs.json
[2025-10-13 00:46:11] -rw-------. 1 boincer umatlas   1560580 Oct 13 00:03 agis_ddmendpoints.agis.ALL.json
[2025-10-13 00:46:11] drwx------. 5 boincer umatlas      4096 Oct 13 00:03 pilot3
[2025-10-13 00:46:11] -rw-r--r--. 1 boincer umatlas      7165 Oct 13 00:40 init_data.xml
[2025-10-13 00:46:11] -rw-------. 1 boincer umatlas 198961750 Oct 13 00:45 HITS.46676269._092365.pool.root.1
[2025-10-13 00:46:11] -rw-r--r--. 1 boincer umatlas       529 Oct 13 00:45 boinc_task_state.xml
[2025-10-13 00:46:11] -rw-------. 1 boincer umatlas      1027 Oct 13 00:45 memory_monitor_summary.json
[2025-10-13 00:46:11] -rw-------. 1 boincer umatlas    307521 Oct 13 00:45 log.46676269._092365.job.log.tgz.1
[2025-10-13 00:46:11] -rw-------. 1 boincer umatlas      7765 Oct 13 00:45 heartbeat.json
[2025-10-13 00:46:11] -rw-r--r--. 1 boincer umatlas        27 Oct 13 00:46 wrapper_checkpoint.txt
[2025-10-13 00:46:11] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 00:46 boinc_mmap_file
[2025-10-13 00:46:11] -rw-------. 1 boincer umatlas        95 Oct 13 00:46 pilot_heartbeat.json
[2025-10-13 00:46:11] -rw-------. 1 boincer umatlas       822 Oct 13 00:46 pilotlog.txt
[2025-10-13 00:46:11] -rw-------. 1 boincer umatlas    393862 Oct 13 00:46 log.46676269._092365.job.log.1
[2025-10-13 00:46:11] -rw-------. 1 boincer umatlas       357 Oct 13 00:46 output.list
[2025-10-13 00:46:11] -rw-r--r--. 1 boincer umatlas       620 Oct 13 00:46 runtime_log
[2025-10-13 00:46:11] -rw-------. 1 boincer umatlas    716800 Oct 13 00:46 result.tar.gz
[2025-10-13 00:46:11] -rw-------. 1 boincer umatlas       648 Oct 13 00:46 V9iLDm3qKS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmMIVMDmoYuQAn.diag
[2025-10-13 00:46:11] -rw-r--r--. 1 boincer umatlas      8707 Oct 13 00:46 runtime_log.err
[2025-10-13 00:46:11] -rw-r--r--. 1 boincer umatlas     21599 Oct 13 00:46 stderr.txt
[2025-10-13 00:46:11] HITS file was successfully produced:
[2025-10-13 00:46:11] -rw-------. 1 boincer umatlas 198961750 Oct 13 00:45 shared/HITS.pool.root.1
[2025-10-13 00:46:11]  *** Contents of shared directory: ***
[2025-10-13 00:46:11] total 412428
[2025-10-13 00:46:11] -rw-r--r--. 2 boincer umatlas 222045623 Oct 13 00:03 ATLAS.root_0
[2025-10-13 00:46:11] -rw-r--r--. 2 boincer umatlas    569683 Oct 13 00:03 input.tar.gz
[2025-10-13 00:46:11] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:03 start_atlas.sh
[2025-10-13 00:46:11] -rw-------. 1 boincer umatlas 198961750 Oct 13 00:45 HITS.pool.root.1
[2025-10-13 00:46:11] -rw-------. 1 boincer umatlas    716800 Oct 13 00:46 result.tar.gz
00:46:13 (1092323): run_atlas exited; CPU time 18430.569675
00:46:13 (1092323): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN