Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:48 (1938629): wrapper (7.7.26015): starting
00:03:48 (1938629): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:03:48] Arguments: --nthreads 12
[2025-10-13 00:03:48] Threads: 12
[2025-10-13 00:03:48] Checking for CVMFS
[2025-10-13 00:03:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:03:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:03:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:03:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:03:51] 2.11.5.0 2587925 130178 304536 151647 0 829 18876039 32935936 33272 16776704 0 335208597 99.647 303550234 20114 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:03:51] CVMFS is ok
[2025-10-13 00:03:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:03:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:03:51] Further information can be found at the LHC@home message board.
[2025-10-13 00:03:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:03:51] Checking for apptainer binary...
[2025-10-13 00:03:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:03:51] Running /usr/bin/apptainer --version
[2025-10-13 00:03:51] apptainer version 1.4.3-1.el9
[2025-10-13 00:03:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:03:52] c6-2-11-1.aglt2.org
[2025-10-13 00:03:52] apptainer works
[2025-10-13 00:03:52] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:03:52] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:03:52] Starting ATLAS job with PandaID=6840962074
[2025-10-13 00:03:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:45:03]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:45:03] 2025-10-13 07:44:12,144 | INFO     | intersect: -80708303794.58743
[2025-10-13 03:45:03] 2025-10-13 07:44:12,145 | INFO     | chi2: 6.5376565486497356
[2025-10-13 03:45:03] 2025-10-13 07:44:12,145 | INFO     | sum of square deviations: 2750477729.9130344
[2025-10-13 03:45:03] 2025-10-13 07:44:12,152 | INFO     | sum of deviations: 144179429436.058
[2025-10-13 03:45:03] 2025-10-13 07:44:12,152 | INFO     | mean x: 1760334805.0724638
[2025-10-13 03:45:03] 2025-10-13 07:44:12,152 | INFO     | mean y: 2184245.729468599
[2025-10-13 03:45:03] 2025-10-13 07:44:12,152 | INFO     | -- intersect: -92274173803.4619
[2025-10-13 03:45:03] 2025-10-13 07:44:12,152 | INFO     | intersect: -92274173803.4619
[2025-10-13 03:45:03] 2025-10-13 07:44:12,153 | INFO     | chi2: 5.859951593897498
[2025-10-13 03:45:03] 2025-10-13 07:44:12,153 | INFO     | current chi2=5.859951593897498 (change=10.36617555096571 %)
[2025-10-13 03:45:03] 2025-10-13 07:44:12,153 | INFO     | right removable region: 206
[2025-10-13 03:45:03] 2025-10-13 07:44:12,153 | INFO     | sum of square deviations: 2750403920.067621
[2025-10-13 03:45:03] 2025-10-13 07:44:12,155 | INFO     | sum of deviations: 77762285802.16417
[2025-10-13 03:45:03] 2025-10-13 07:44:12,155 | INFO     | mean x: 1760335110.0966184
[2025-10-13 03:45:03] 2025-10-13 07:44:12,155 | INFO     | mean y: 2220934.09178744
[2025-10-13 03:45:03] 2025-10-13 07:44:12,155 | INFO     | -- intersect: -49767807729.75329
[2025-10-13 03:45:03] 2025-10-13 07:44:12,155 | INFO     | intersect: -49767807729.75329
[2025-10-13 03:45:03] 2025-10-13 07:44:12,155 | INFO     | chi2: 2.9015599354438173
[2025-10-13 03:45:03] 2025-10-13 07:44:12,156 | INFO     | current chi2=2.9015599354438173 (change=55.617736816671794 %)
[2025-10-13 03:45:03] 2025-10-13 07:44:12,156 | INFO     | sum of square deviations: 2555822729.6485176
[2025-10-13 03:45:03] 2025-10-13 07:44:12,157 | INFO     | sum of deviations: 42382250594.62872
[2025-10-13 03:45:03] 2025-10-13 07:44:12,157 | INFO     | mean x: 1760335262.6188118
[2025-10-13 03:45:03] 2025-10-13 07:44:12,157 | INFO     | mean y: 2248615.202970297
[2025-10-13 03:45:03] 2025-10-13 07:44:12,157 | INFO     | -- intersect: -29188731402.856487
[2025-10-13 03:45:03] 2025-10-13 07:44:12,158 | INFO     | intersect: -29188731402.856487
[2025-10-13 03:45:03] 2025-10-13 07:44:12,158 | INFO     | chi2: 1.6665840069952362
[2025-10-13 03:45:03] 2025-10-13 07:44:12,158 | INFO     | current chi2=1.6665840069952362 (change=42.56248211049555 %)
[2025-10-13 03:45:03] 2025-10-13 07:44:12,158 | INFO     | sum of square deviations: 2370649509.2994885
[2025-10-13 03:45:03] 2025-10-13 07:44:12,159 | INFO     | sum of deviations: 17899552017.147213
[2025-10-13 03:45:03] 2025-10-13 07:44:12,160 | INFO     | mean x: 1760335415.1370559
[2025-10-13 03:45:03] 2025-10-13 07:44:12,160 | INFO     | mean y: 2268721.2538071065
[2025-10-13 03:45:03] 2025-10-13 07:44:12,160 | INFO     | -- intersect: -13289116279.890007
[2025-10-13 03:45:03] 2025-10-13 07:44:12,160 | INFO     | intersect: -13289116279.890007
[2025-10-13 03:45:03] 2025-10-13 07:44:12,160 | INFO     | chi2: 1.060389675108302
[2025-10-13 03:45:03] 2025-10-13 07:44:12,160 | INFO     | current chi2=1.060389675108302 (change=36.373463884360135 %)
[2025-10-13 03:45:03] 2025-10-13 07:44:12,161 | INFO     | sum of square deviations: 2194638885.3125
[2025-10-13 03:45:03] 2025-10-13 07:44:12,162 | INFO     | sum of deviations: 1991944162.03125
[2025-10-13 03:45:03] 2025-10-13 07:44:12,162 | INFO     | mean x: 1760335567.65625
[2025-10-13 03:45:03] 2025-10-13 07:44:12,162 | INFO     | mean y: 2282495.515625
[2025-10-13 03:45:03] 2025-10-13 07:44:12,162 | INFO     | -- intersect: -1595470182.9208257
[2025-10-13 03:45:03] 2025-10-13 07:44:12,162 | INFO     | intersect: -1595470182.9208257
[2025-10-13 03:45:03] 2025-10-13 07:44:12,162 | INFO     | chi2: 0.8069660289128563
[2025-10-13 03:45:03] 2025-10-13 07:44:12,163 | INFO     | current chi2=0.8069660289128563 (change=23.89910540854356 %)
[2025-10-13 03:45:03] 2025-10-13 07:44:12,163 | INFO     | left removable region: 40
[2025-10-13 03:45:03] 2025-10-13 07:44:12,163 | INFO     | sum of square deviations: 1418314996.0783188
[2025-10-13 03:45:03] 2025-10-13 07:44:12,164 | INFO     | sum of deviations: 5216568952.433733
[2025-10-13 03:45:03] 2025-10-13 07:44:12,164 | INFO     | mean x: 1760335994.680723
[2025-10-13 03:45:03] 2025-10-13 07:44:12,164 | INFO     | mean y: 2299442.3855421687
[2025-10-13 03:45:03] 2025-10-13 07:44:12,164 | INFO     | -- intersect: -6472224285.484522
[2025-10-13 03:45:03] 2025-10-13 07:44:12,164 | INFO     | intersect: -6472224285.484522
[2025-10-13 03:45:03] 2025-10-13 07:44:12,164 | INFO     | chi2: 0.045396299855037306
[2025-10-13 03:45:03] 2025-10-13 07:44:12,165 | INFO     | -- intersect: -6472224285.484522
[2025-10-13 03:45:03] 2025-10-13 07:44:12,165 | INFO     | current memory leak: 3.68 B/s (using 166 data points, chi2=0.05)
[2025-10-13 03:45:03] 2025-10-13 07:44:12,165 | INFO     | could have reported an average CPU frequency of 2546 MHz (11 samples)
[2025-10-13 03:45:03] 2025-10-13 07:44:12,165 | INFO     | ..............................
[2025-10-13 03:45:03] 2025-10-13 07:44:12,166 | INFO     | . Timing measurements:
[2025-10-13 03:45:03] 2025-10-13 07:44:12,166 | INFO     | . get job = 0 s
[2025-10-13 03:45:03] 2025-10-13 07:44:12,166 | INFO     | . initial setup = 9 s
[2025-10-13 03:45:03] 2025-10-13 07:44:12,166 | INFO     | . payload setup = 57 s
[2025-10-13 03:45:03] 2025-10-13 07:44:12,166 | INFO     | . stage-in = 1 s
[2025-10-13 03:45:03] 2025-10-13 07:44:12,166 | INFO     | . payload execution = 12941 s
[2025-10-13 03:45:03] 2025-10-13 07:44:12,166 | INFO     | . stage-out = 3 s
[2025-10-13 03:45:03] 2025-10-13 07:44:12,166 | INFO     | . log creation = 0 s
[2025-10-13 03:45:03] 2025-10-13 07:44:12,166 | INFO     | ..............................
[2025-10-13 03:45:03] 2025-10-13 07:44:12,445 | INFO     | 
[2025-10-13 03:45:03] 2025-10-13 07:44:12,445 | INFO     | job summary report
[2025-10-13 03:45:03] 2025-10-13 07:44:12,445 | INFO     | --------------------------------------------------
[2025-10-13 03:45:03] 2025-10-13 07:44:12,445 | INFO     | PanDA job id: 6840962074
[2025-10-13 03:45:03] 2025-10-13 07:44:12,445 | INFO     | task id: 46676269
[2025-10-13 03:45:03] 2025-10-13 07:44:12,445 | INFO     | errors: (none)
[2025-10-13 03:45:03] 2025-10-13 07:44:12,445 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:45:03] 2025-10-13 07:44:12,445 | INFO     | pilot state: finished 
[2025-10-13 03:45:03] 2025-10-13 07:44:12,445 | INFO     | transexitcode: 0
[2025-10-13 03:45:03] 2025-10-13 07:44:12,446 | INFO     | exeerrorcode: 0
[2025-10-13 03:45:03] 2025-10-13 07:44:12,446 | INFO     | exeerrordiag: 
[2025-10-13 03:45:03] 2025-10-13 07:44:12,446 | INFO     | exitcode: 0
[2025-10-13 03:45:03] 2025-10-13 07:44:12,446 | INFO     | exitmsg: OK
[2025-10-13 03:45:03] 2025-10-13 07:44:12,446 | INFO     | cpuconsumptiontime: 45944 s
[2025-10-13 03:45:03] 2025-10-13 07:44:12,446 | INFO     | nevents: 400
[2025-10-13 03:45:03] 2025-10-13 07:44:12,446 | INFO     | neventsw: 0
[2025-10-13 03:45:03] 2025-10-13 07:44:12,446 | INFO     | pid: 1972911
[2025-10-13 03:45:03] 2025-10-13 07:44:12,446 | INFO     | pgrp: 1972911
[2025-10-13 03:45:03] 2025-10-13 07:44:12,446 | INFO     | corecount: 12
[2025-10-13 03:45:03] 2025-10-13 07:44:12,446 | INFO     | event service: False
[2025-10-13 03:45:03] 2025-10-13 07:44:12,446 | INFO     | sizes: {0: 2347979, 1: 2348664, 2: 2348863, 13: 2348863, 25: 2348919, 37: 2348947, 46: 2349365, 48: 2349393, 13002: 2379264, 13007: 2388262, 13008: 2388318, 13029:
[2025-10-13 03:45:03] 2025-10-13 07:44:12,446 | INFO     | --------------------------------------------------
[2025-10-13 03:45:03] 2025-10-13 07:44:12,446 | INFO     | 
[2025-10-13 03:45:03] 2025-10-13 07:44:12,446 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-13 03:45:03] 2025-10-13 07:44:12,500 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:45:03] 2025-10-13 07:44:12,502 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:45:03] 2025-10-13 07:44:12,502 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:45:03] 2025-10-13 07:44:12,502 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:45:03] 2025-10-13 07:44:12,502 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:45:03] 2025-10-13 07:44:12,502 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:45:03] 2025-10-13 07:44:12,502 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:45:03] 2025-10-13 07:44:12,502 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:45:03] 2025-10-13 07:44:12,502 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:45:03] 2025-10-13 07:44:12,502 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:45:03] 2025-10-13 07:44:12,502 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:45:03] 2025-10-13 07:44:12,502 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:45:03] 2025-10-13 07:44:12,503 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:45:03] 2025-10-13 07:44:12,503 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:45:03] 2025-10-13 07:44:12,503 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:45:03] 2025-10-13 07:44:12,503 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:45:03] 2025-10-13 07:44:12,503 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:45:03] 2025-10-13 07:44:12,503 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:45:03] 2025-10-13 07:44:12,503 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:45:03] 2025-10-13 07:44:12,503 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:45:03] 2025-10-13 07:44:12,503 | INFO     | job 6840962074 has completed (purged errors)
[2025-10-13 03:45:03] 2025-10-13 07:44:12,503 | INFO     | overall cleanup function is called
[2025-10-13 03:45:03] 2025-10-13 07:44:13,514 | INFO     | --- collectZombieJob: --- 10, [1972911]
[2025-10-13 03:45:03] 2025-10-13 07:44:13,515 | INFO     | zombie collector waiting for pid 1972911
[2025-10-13 03:45:03] 2025-10-13 07:44:13,515 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:45:03] 2025-10-13 07:44:13,515 | INFO     | collected zombie processes
[2025-10-13 03:45:03] 2025-10-13 07:44:13,515 | INFO     | will attempt to kill all subprocesses of pid=1972911
[2025-10-13 03:45:03] 2025-10-13 07:44:14,193 | INFO     | process IDs to be killed: [1972911] (in reverse order)
[2025-10-13 03:45:03] 2025-10-13 07:44:14,330 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:45:03] 2025-10-13 07:44:14,330 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:45:03] 2025-10-13 07:44:14,349 | INFO     | did not find any defunct processes belonging to 1972911
[2025-10-13 03:45:03] 2025-10-13 07:44:14,367 | INFO     | did not find any defunct processes belonging to 1972911
[2025-10-13 03:45:03] 2025-10-13 07:44:14,368 | INFO     | ready for new job
[2025-10-13 03:45:03] 2025-10-13 07:44:14,368 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:45:03] 2025-10-13 07:44:14,370 | INFO     | ***************************************
[2025-10-13 03:45:03] 2025-10-13 07:44:14,370 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:45:03] 2025-10-13 07:44:14,370 | INFO     | ***************************************
[2025-10-13 03:45:03] 2025-10-13 07:44:14,370 | INFO     | 
[2025-10-13 03:45:03] 2025-10-13 07:44:14,411 | INFO     | architecture information:
[2025-10-13 03:45:03] 2025-10-13 07:44:14,419 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:45:03] 2025-10-13 07:44:14,463 | INFO     | cat /etc/os-release:
[2025-10-13 03:45:03] NAME="CentOS Linux"
[2025-10-13 03:45:03] VERSION="7 (Core)"
[2025-10-13 03:45:03] ID="centos"
[2025-10-13 03:45:03] ID_LIKE="rhel fedora"
[2025-10-13 03:45:03] VERSION_ID="7"
[2025-10-13 03:45:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:45:03] ANSI_COLOR="0;31"
[2025-10-13 03:45:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:45:03] HOME_URL="https://www.centos.org/"
[2025-10-13 03:45:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:45:03] 
[2025-10-13 03:45:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:45:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:45:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:45:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:45:03] 
[2025-10-13 03:45:03] 2025-10-13 07:44:14,463 | INFO     | ***************************************
[2025-10-13 03:45:03] 2025-10-13 07:44:14,967 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-13 03:45:03] 2025-10-13 07:44:15,001 | INFO     | sufficient remaining disk space (93556047872 B)
[2025-10-13 03:45:03] 2025-10-13 07:44:15,001 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:45:03] 2025-10-13 07:44:15,001 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:45:03] 2025-10-13 07:44:15,002 | INFO     | update_server=False
[2025-10-13 03:45:03] 2025-10-13 07:44:15,002 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:45:03] 2025-10-13 07:44:15,002 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:45:03] 2025-10-13 07:44:15,003 | INFO     | aborting loop
[2025-10-13 03:45:03] 2025-10-13 07:44:15,152 | INFO     | all payload control threads have been joined
[2025-10-13 03:45:03] 2025-10-13 07:44:15,235 | INFO     | all data control threads have been joined
[2025-10-13 03:45:03] 2025-10-13 07:44:15,487 | INFO     | all job control threads have been joined
[2025-10-13 03:45:03] 2025-10-13 07:44:15,686 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:45:03] 2025-10-13 07:44:16,008 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:45:03] 2025-10-13 07:44:16,009 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:45:03] 2025-10-13 07:44:16,158 | INFO     | [payload] control thread has finished
[2025-10-13 03:45:03] 2025-10-13 07:44:16,241 | INFO     | [data] control thread has finished
[2025-10-13 03:45:03] 2025-10-13 07:44:16,251 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:45:03] 2025-10-13 07:44:16,345 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:45:03] 2025-10-13 07:44:16,494 | INFO     | [job] control thread has finished
[2025-10-13 03:45:03] 2025-10-13 07:44:16,669 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:45:03] 2025-10-13 07:44:16,940 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:45:03] 2025-10-13 07:44:17,010 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:45:03] 2025-10-13 07:44:17,181 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:45:03] 2025-10-13 07:44:17,195 | INFO     | [job] validate thread has finished
[2025-10-13 03:45:03] 2025-10-13 07:44:17,440 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:45:03] 2025-10-13 07:44:17,461 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:45:03] 2025-10-13 07:44:18,356 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:45:03] 2025-10-13 07:44:18,468 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:45:03] 2025-10-13 07:44:19,700 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:45:03] 2025-10-13 07:44:25,501 | INFO     | job.realtimelogging is not enabled
[2025-10-13 03:45:03] 2025-10-13 07:44:26,508 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:45:03] 2025-10-13 07:44:44,408 | INFO     | PID=1948973 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 03:45:03] 2025-10-13 07:44:44,408 | INFO     | .. there are 36 such processes running
[2025-10-13 03:45:03] 2025-10-13 07:44:44,409 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:45:03] 2025-10-13 07:44:44,409 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:45:03] 2025-10-13 07:44:44,409 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:45:03] 2025-10-13 07:44:56,881 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:45:03] 2025-10-13 07:44:57,157 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140264571258688)>', '<ExcThread(monitor, started 140263498446592)>']
[2025-10-13 03:45:03] 2025-10-13 07:44:57,499 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:45:03] 2025-10-13 07:44:57,500 | INFO     | [monitor] control thread has ended
[2025-10-13 03:45:03] 2025-10-13 07:45:02,182 | INFO     | all workflow threads have been joined
[2025-10-13 03:45:03] 2025-10-13 07:45:02,183 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:45:03] 2025-10-13 07:45:02,183 | INFO     | traces error code: 0
[2025-10-13 03:45:03] 2025-10-13 07:45:02,183 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:45:03] 2025-10-13 07:45:02,447 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:45:03] 2025-10-13 07:45:02,462 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:45:03] 2025-10-13 07:45:02,478 [wrapper] pilotpid: 1948973
[2025-10-13 03:45:03] 2025-10-13 07:45:02,481 [wrapper] Pilot exit status: 0
[2025-10-13 03:45:03] 2025-10-13 07:45:02,555 [wrapper] pandaids: 6840962074
[2025-10-13 03:45:03] 2025-10-13 07:45:02,800 [wrapper] cleanup supervisor_pilot 2651796 1948974
[2025-10-13 03:45:03] 2025-10-13 07:45:02,805 [wrapper] Test setup, not cleaning
[2025-10-13 03:45:03] 2025-10-13 07:45:02,808 [wrapper] apfmon messages muted
[2025-10-13 03:45:03] 2025-10-13 07:45:02,811 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:45:03] 2025-10-13 07:45:02,829 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:45:03]  *** Error codes and diagnostics ***
[2025-10-13 03:45:03]     "exeErrorCode": 0,
[2025-10-13 03:45:03]     "exeErrorDiag": "",
[2025-10-13 03:45:03]     "pilotErrorCode": 0,
[2025-10-13 03:45:03]     "pilotErrorDiag": "",
[2025-10-13 03:45:03]  *** Listing of results directory ***
[2025-10-13 03:45:03] total 407884
[2025-10-13 03:45:03] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 19:11 pilot3.tar.gz
[2025-10-13 03:45:03] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:15 queuedata.json
[2025-10-13 03:45:03] -rwx------. 1 boincer umatlas     36292 Oct 12 19:16 runpilot2-wrapper.sh
[2025-10-13 03:45:03] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:45:03] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:03 run_atlas
[2025-10-13 03:45:03] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:03 job.xml
[2025-10-13 03:45:03] -rw-r--r--. 2 boincer umatlas 220460643 Oct 13 00:03 EVNT.46676267._002257.pool.root.1
[2025-10-13 03:45:03] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:03 start_atlas.sh
[2025-10-13 03:45:03] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:03 shared
[2025-10-13 03:45:03] -rw-r--r--. 2 boincer umatlas    569687 Oct 13 00:03 input.tar.gz
[2025-10-13 03:45:03] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:03 boinc_lockfile
[2025-10-13 03:45:03] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:03 pandaJob.out
[2025-10-13 03:45:03] -rw-------. 1 boincer umatlas    974373 Oct 13 00:05 agis_schedconf.cvmfs.json
[2025-10-13 03:45:03] drwx------. 5 boincer umatlas      4096 Oct 13 00:05 pilot3
[2025-10-13 03:45:03] -rw-r--r--. 1 boincer umatlas      6858 Oct 13 03:40 init_data.xml
[2025-10-13 03:45:03] -rw-------. 1 boincer umatlas 189188252 Oct 13 03:42 HITS.46676269._092045.pool.root.1
[2025-10-13 03:45:03] -rw-r--r--. 1 boincer umatlas       531 Oct 13 03:43 boinc_task_state.xml
[2025-10-13 03:45:03] -rw-------. 1 boincer umatlas      1044 Oct 13 03:43 memory_monitor_summary.json
[2025-10-13 03:45:03] -rw-------. 1 boincer umatlas   1560580 Oct 13 03:43 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:45:03] -rw-------. 1 boincer umatlas    507486 Oct 13 03:43 log.46676269._092045.job.log.tgz.1
[2025-10-13 03:45:03] -rw-------. 1 boincer umatlas      7836 Oct 13 03:44 heartbeat.json
[2025-10-13 03:45:03] -rw-------. 1 boincer umatlas        95 Oct 13 03:44 pilot_heartbeat.json
[2025-10-13 03:45:03] -rw-------. 1 boincer umatlas      4896 Oct 13 03:45 pilotlog.txt
[2025-10-13 03:45:03] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 03:45 boinc_mmap_file
[2025-10-13 03:45:03] -rw-r--r--. 1 boincer umatlas        28 Oct 13 03:45 wrapper_checkpoint.txt
[2025-10-13 03:45:03] -rw-------. 1 boincer umatlas   1552425 Oct 13 03:45 log.46676269._092045.job.log.1
[2025-10-13 03:45:03] -rw-------. 1 boincer umatlas       357 Oct 13 03:45 output.list
[2025-10-13 03:45:03] -rw-r--r--. 1 boincer umatlas       620 Oct 13 03:45 runtime_log
[2025-10-13 03:45:03] -rw-------. 1 boincer umatlas   2078720 Oct 13 03:45 result.tar.gz
[2025-10-13 03:45:03] -rw-r--r--. 1 boincer umatlas      8711 Oct 13 03:45 runtime_log.err
[2025-10-13 03:45:03] -rw-------. 1 boincer umatlas       656 Oct 13 03:45 6N7MDmBUKS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm10lNDms57UNn.diag
[2025-10-13 03:45:03] -rw-r--r--. 1 boincer umatlas     21032 Oct 13 03:45 stderr.txt
[2025-10-13 03:45:03] HITS file was successfully produced:
[2025-10-13 03:45:03] -rw-------. 1 boincer umatlas 189188252 Oct 13 03:42 shared/HITS.pool.root.1
[2025-10-13 03:45:03]  *** Contents of shared directory: ***
[2025-10-13 03:45:03] total 402668
[2025-10-13 03:45:03] -rw-r--r--. 2 boincer umatlas 220460643 Oct 13 00:03 ATLAS.root_0
[2025-10-13 03:45:03] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:03 start_atlas.sh
[2025-10-13 03:45:03] -rw-r--r--. 2 boincer umatlas    569687 Oct 13 00:03 input.tar.gz
[2025-10-13 03:45:03] -rw-------. 1 boincer umatlas 189188252 Oct 13 03:42 HITS.pool.root.1
[2025-10-13 03:45:03] -rw-------. 1 boincer umatlas   2078720 Oct 13 03:45 result.tar.gz
03:45:04 (1938629): run_atlas exited; CPU time 46576.607684
03:45:04 (1938629): called boinc_finish(0)

</stderr_txt>
]]>

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