Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:54 (2026265): wrapper (7.7.26015): starting
00:03:54 (2026265): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:03:54] Arguments: --nthreads 12
[2025-10-13 00:03:54] Threads: 12
[2025-10-13 00:03:54] Checking for CVMFS
[2025-10-13 00:03:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:03:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:03:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:03:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:03:56] 2.13.2.0 891182 139024 556872 151647 0 1002 23199567 32935937 44886 16776704 0 485478041 99.679 404916358 16820 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:03:56] CVMFS is ok
[2025-10-13 00:03:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:03:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:03:56] Further information can be found at the LHC@home message board.
[2025-10-13 00:03:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:03:56] Checking for apptainer binary...
[2025-10-13 00:03:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:03:56] Running /usr/bin/apptainer --version
[2025-10-13 00:03:56] apptainer version 1.4.3-1.el9
[2025-10-13 00:03:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:03:56] c7-3-29.aglt2.org
[2025-10-13 00:03:56] apptainer works
[2025-10-13 00:03:57] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:03:57] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:03:57] Starting ATLAS job with PandaID=6840962043
[2025-10-13 00:03:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:24:50]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:24:50] 2025-10-13 12:23:52,581 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6840962043/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 08:24:50] 2025-10-13 12:23:52,582 | INFO     | extracted standard info from prmon json
[2025-10-13 08:24:50] 2025-10-13 12:23:52,582 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 08:24:50] 2025-10-13 12:23:52,582 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 08:24:50] 2025-10-13 12:23:52,599 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 08:24:50] 2025-10-13 12:23:52,599 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 08:24:50] 2025-10-13 12:23:52,608 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:24:50] 2025-10-13 12:23:52,631 | INFO     | sum of square deviations: 36257921285.705734
[2025-10-13 08:24:50] 2025-10-13 12:23:52,689 | INFO     | sum of deviations: 560863077450.0492
[2025-10-13 08:24:50] 2025-10-13 12:23:52,689 | INFO     | mean x: 1760343261.02454
[2025-10-13 08:24:50] 2025-10-13 12:23:52,689 | INFO     | mean y: 2297375.662576687
[2025-10-13 08:24:50] 2025-10-13 12:23:52,689 | INFO     | -- intersect: -27227932701.976063
[2025-10-13 08:24:50] 2025-10-13 12:23:52,689 | INFO     | intersect: -27227932701.976063
[2025-10-13 08:24:50] 2025-10-13 12:23:52,690 | INFO     | chi2: 6.296585510848038
[2025-10-13 08:24:50] 2025-10-13 12:23:52,691 | INFO     | sum of square deviations: 35157048490.702446
[2025-10-13 08:24:50] 2025-10-13 12:23:52,728 | INFO     | sum of deviations: 588729455339.1444
[2025-10-13 08:24:50] 2025-10-13 12:23:52,729 | INFO     | mean x: 1760343108.5247934
[2025-10-13 08:24:50] 2025-10-13 12:23:52,729 | INFO     | mean y: 2301200.6962809917
[2025-10-13 08:24:50] 2025-10-13 12:23:52,729 | INFO     | -- intersect: -29475879817.99455
[2025-10-13 08:24:50] 2025-10-13 12:23:52,729 | INFO     | intersect: -29475879817.99455
[2025-10-13 08:24:50] 2025-10-13 12:23:52,729 | INFO     | chi2: 5.468925449962527
[2025-10-13 08:24:50] 2025-10-13 12:23:52,729 | INFO     | current chi2=5.468925449962527 (change=13.144585417915488 %)
[2025-10-13 08:24:50] 2025-10-13 12:23:52,729 | INFO     | right removable region: 483
[2025-10-13 08:24:50] 2025-10-13 12:23:52,730 | INFO     | sum of square deviations: 35157041170.702446
[2025-10-13 08:24:50] 2025-10-13 12:23:52,758 | INFO     | sum of deviations: 429551837752.2353
[2025-10-13 08:24:50] 2025-10-13 12:23:52,758 | INFO     | mean x: 1760343413.5247934
[2025-10-13 08:24:50] 2025-10-13 12:23:52,758 | INFO     | mean y: 2315539.605371901
[2025-10-13 08:24:50] 2025-10-13 12:23:52,758 | INFO     | -- intersect: -21505715943.565933
[2025-10-13 08:24:50] 2025-10-13 12:23:52,759 | INFO     | intersect: -21505715943.565933
[2025-10-13 08:24:50] 2025-10-13 12:23:52,759 | INFO     | chi2: 3.18943493347839
[2025-10-13 08:24:50] 2025-10-13 12:23:52,759 | INFO     | current chi2=3.18943493347839 (change=49.34659542090726 %)
[2025-10-13 08:24:50] 2025-10-13 12:23:52,783 | INFO     | sum of square deviations: 34078673105.699432
[2025-10-13 08:24:50] 2025-10-13 12:23:52,807 | INFO     | sum of deviations: 384302615697.1674
[2025-10-13 08:24:50] 2025-10-13 12:23:52,808 | INFO     | mean x: 1760343566.0250523
[2025-10-13 08:24:50] 2025-10-13 12:23:52,808 | INFO     | mean y: 2321929.3194154487
[2025-10-13 08:24:50] 2025-10-13 12:23:52,808 | INFO     | -- intersect: -19848939146.804054
[2025-10-13 08:24:50] 2025-10-13 12:23:52,808 | INFO     | intersect: -19848939146.804054
[2025-10-13 08:24:50] 2025-10-13 12:23:52,809 | INFO     | chi2: 2.9309997934888514
[2025-10-13 08:24:50] 2025-10-13 12:23:52,809 | INFO     | current chi2=2.9309997934888514 (change=8.10285036000687 %)
[2025-10-13 08:24:50] 2025-10-13 12:23:52,809 | INFO     | left removable region: 20
[2025-10-13 08:24:50] 2025-10-13 12:23:52,809 | INFO     | sum of square deviations: 30776476169.688946
[2025-10-13 08:24:50] 2025-10-13 12:23:52,823 | INFO     | sum of deviations: 325620506403.09265
[2025-10-13 08:24:50] 2025-10-13 12:23:52,827 | INFO     | mean x: 1760343688.025918
[2025-10-13 08:24:50] 2025-10-13 12:23:52,828 | INFO     | mean y: 2338779.0755939526
[2025-10-13 08:24:50] 2025-10-13 12:23:52,828 | INFO     | -- intersect: -18622405651.640705
[2025-10-13 08:24:50] 2025-10-13 12:23:52,828 | INFO     | intersect: -18622405651.640705
[2025-10-13 08:24:50] 2025-10-13 12:23:52,833 | INFO     | chi2: 1.6560602009461907
[2025-10-13 08:24:50] 2025-10-13 12:23:52,833 | INFO     | -- intersect: -18622405651.640705
[2025-10-13 08:24:50] 2025-10-13 12:23:52,833 | INFO     | current memory leak: 10.58 B/s (using 463 data points, chi2=1.66)
[2025-10-13 08:24:50] 2025-10-13 12:23:52,834 | INFO     | could have reported an average CPU frequency of 3091 MHz (20 samples)
[2025-10-13 08:24:50] 2025-10-13 12:23:52,834 | INFO     | ..............................
[2025-10-13 08:24:50] 2025-10-13 12:23:52,834 | INFO     | . Timing measurements:
[2025-10-13 08:24:50] 2025-10-13 12:23:52,834 | INFO     | . get job = 0 s
[2025-10-13 08:24:50] 2025-10-13 12:23:52,834 | INFO     | . initial setup = 5 s
[2025-10-13 08:24:50] 2025-10-13 12:23:52,834 | INFO     | . payload setup = 31 s
[2025-10-13 08:24:50] 2025-10-13 12:23:52,834 | INFO     | . stage-in = 0 s
[2025-10-13 08:24:50] 2025-10-13 12:23:52,834 | INFO     | . payload execution = 29843 s
[2025-10-13 08:24:50] 2025-10-13 12:23:52,835 | INFO     | . stage-out = 5 s
[2025-10-13 08:24:50] 2025-10-13 12:23:52,835 | INFO     | . log creation = 0 s
[2025-10-13 08:24:50] 2025-10-13 12:23:52,835 | INFO     | ..............................
[2025-10-13 08:24:50] 2025-10-13 12:23:52,855 | INFO     | time since job start (29944s) is within the limit (172800.0s)
[2025-10-13 08:24:50] 2025-10-13 12:23:52,992 | INFO     | 
[2025-10-13 08:24:50] 2025-10-13 12:23:52,992 | INFO     | job summary report
[2025-10-13 08:24:50] 2025-10-13 12:23:52,992 | INFO     | --------------------------------------------------
[2025-10-13 08:24:50] 2025-10-13 12:23:52,992 | INFO     | PanDA job id: 6840962043
[2025-10-13 08:24:50] 2025-10-13 12:23:52,992 | INFO     | task id: 46676269
[2025-10-13 08:24:50] 2025-10-13 12:23:52,992 | INFO     | errors: (none)
[2025-10-13 08:24:50] 2025-10-13 12:23:52,992 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:24:50] 2025-10-13 12:23:52,992 | INFO     | pilot state: finished 
[2025-10-13 08:24:50] 2025-10-13 12:23:52,992 | INFO     | transexitcode: 0
[2025-10-13 08:24:50] 2025-10-13 12:23:52,993 | INFO     | exeerrorcode: 0
[2025-10-13 08:24:50] 2025-10-13 12:23:52,993 | INFO     | exeerrordiag: 
[2025-10-13 08:24:50] 2025-10-13 12:23:52,993 | INFO     | exitcode: 0
[2025-10-13 08:24:50] 2025-10-13 12:23:52,993 | INFO     | exitmsg: OK
[2025-10-13 08:24:50] 2025-10-13 12:23:52,993 | INFO     | cpuconsumptiontime: 36470 s
[2025-10-13 08:24:50] 2025-10-13 12:23:52,993 | INFO     | nevents: 400
[2025-10-13 08:24:50] 2025-10-13 12:23:52,993 | INFO     | neventsw: 0
[2025-10-13 08:24:50] 2025-10-13 12:23:52,993 | INFO     | pid: 2041066
[2025-10-13 08:24:50] 2025-10-13 12:23:52,993 | INFO     | pgrp: 2041066
[2025-10-13 08:24:50] 2025-10-13 12:23:52,993 | INFO     | corecount: 12
[2025-10-13 08:24:50] 2025-10-13 12:23:52,993 | INFO     | event service: False
[2025-10-13 08:24:50] 2025-10-13 12:23:52,993 | INFO     | sizes: {0: 2348029, 1: 2348885, 2: 2348885, 12: 2348913, 20: 2349203, 23: 2349231, 29879: 2387276, 29885: 2396330, 29904: 2396468}
[2025-10-13 08:24:50] 2025-10-13 12:23:52,993 | INFO     | --------------------------------------------------
[2025-10-13 08:24:50] 2025-10-13 12:23:52,993 | INFO     | 
[2025-10-13 08:24:50] 2025-10-13 12:23:52,993 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 08:24:50] 2025-10-13 12:23:53,106 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:24:50] 2025-10-13 12:23:53,107 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:24:50] 2025-10-13 12:23:53,107 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:24:50] 2025-10-13 12:23:53,107 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:24:50] 2025-10-13 12:23:53,107 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:24:50] 2025-10-13 12:23:53,107 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:24:50] 2025-10-13 12:23:53,107 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:24:50] 2025-10-13 12:23:53,107 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:24:50] 2025-10-13 12:23:53,107 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:24:50] 2025-10-13 12:23:53,108 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:24:50] 2025-10-13 12:23:53,108 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:24:50] 2025-10-13 12:23:53,108 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:24:50] 2025-10-13 12:23:53,108 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:24:50] 2025-10-13 12:23:53,108 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:24:50] 2025-10-13 12:23:53,108 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:24:50] 2025-10-13 12:23:53,108 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:24:50] 2025-10-13 12:23:53,108 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:24:50] 2025-10-13 12:23:53,108 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:24:50] 2025-10-13 12:23:53,108 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:24:50] 2025-10-13 12:23:53,108 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:24:50] 2025-10-13 12:23:53,109 | INFO     | job 6840962043 has completed (purged errors)
[2025-10-13 08:24:50] 2025-10-13 12:23:53,109 | INFO     | overall cleanup function is called
[2025-10-13 08:24:50] 2025-10-13 12:23:54,135 | INFO     | --- collectZombieJob: --- 10, [2041066]
[2025-10-13 08:24:50] 2025-10-13 12:23:54,135 | INFO     | zombie collector waiting for pid 2041066
[2025-10-13 08:24:50] 2025-10-13 12:23:54,135 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:24:50] 2025-10-13 12:23:54,135 | INFO     | collected zombie processes
[2025-10-13 08:24:50] 2025-10-13 12:23:54,135 | INFO     | will attempt to kill all subprocesses of pid=2041066
[2025-10-13 08:24:50] 2025-10-13 12:23:57,919 | INFO     | PID=2032153 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 08:24:50] 2025-10-13 12:23:57,919 | INFO     | .. there are 41 such processes running
[2025-10-13 08:24:50] 2025-10-13 12:23:58,120 | INFO     | process IDs to be killed: [2041066] (in reverse order)
[2025-10-13 08:24:50] 2025-10-13 12:23:59,275 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:24:50] 2025-10-13 12:23:59,275 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:24:50] 2025-10-13 12:23:59,373 | INFO     | did not find any defunct processes belonging to 2041066
[2025-10-13 08:24:50] 2025-10-13 12:23:59,398 | INFO     | did not find any defunct processes belonging to 2041066
[2025-10-13 08:24:50] 2025-10-13 12:23:59,401 | INFO     | ready for new job
[2025-10-13 08:24:50] 2025-10-13 12:23:59,402 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:24:50] 2025-10-13 12:23:59,404 | INFO     | ***************************************
[2025-10-13 08:24:50] 2025-10-13 12:23:59,404 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:24:50] 2025-10-13 12:23:59,405 | INFO     | ***************************************
[2025-10-13 08:24:50] 2025-10-13 12:23:59,405 | INFO     | 
[2025-10-13 08:24:50] 2025-10-13 12:23:59,425 | INFO     | architecture information:
[2025-10-13 08:24:50] 2025-10-13 12:23:59,425 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:24:50] 2025-10-13 12:23:59,462 | INFO     | cat /etc/os-release:
[2025-10-13 08:24:50] NAME="CentOS Linux"
[2025-10-13 08:24:50] VERSION="7 (Core)"
[2025-10-13 08:24:50] ID="centos"
[2025-10-13 08:24:50] ID_LIKE="rhel fedora"
[2025-10-13 08:24:50] VERSION_ID="7"
[2025-10-13 08:24:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:24:50] ANSI_COLOR="0;31"
[2025-10-13 08:24:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:24:50] HOME_URL="https://www.centos.org/"
[2025-10-13 08:24:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:24:50] 
[2025-10-13 08:24:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:24:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:24:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:24:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:24:50] 
[2025-10-13 08:24:50] 2025-10-13 12:23:59,462 | INFO     | ***************************************
[2025-10-13 08:24:50] 2025-10-13 12:23:59,966 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 08:24:50] 2025-10-13 12:24:00,005 | INFO     | sufficient remaining disk space (74665951232 B)
[2025-10-13 08:24:50] 2025-10-13 12:24:00,006 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:24:50] 2025-10-13 12:24:00,006 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:24:50] 2025-10-13 12:24:00,006 | INFO     | update_server=False
[2025-10-13 08:24:50] 2025-10-13 12:24:00,006 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:24:50] 2025-10-13 12:24:00,007 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:24:50] 2025-10-13 12:24:00,083 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 08:24:50] 2025-10-13 12:24:00,083 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 08:24:50] 2025-10-13 12:24:00,083 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:24:50] 2025-10-13 12:24:00,083 | INFO     | will abort loop
[2025-10-13 08:24:50] 2025-10-13 12:24:00,527 | INFO     | all job control threads have been joined
[2025-10-13 08:24:50] 2025-10-13 12:24:00,795 | INFO     | all data control threads have been joined
[2025-10-13 08:24:50] 2025-10-13 12:24:01,012 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:24:50] 2025-10-13 12:24:01,090 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:24:50] 2025-10-13 12:24:01,112 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:24:50] 2025-10-13 12:24:01,302 | INFO     | all payload control threads have been joined
[2025-10-13 08:24:50] 2025-10-13 12:24:01,398 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:24:50] 2025-10-13 12:24:01,403 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:24:50] 2025-10-13 12:24:01,534 | INFO     | [job] control thread has finished
[2025-10-13 08:24:50] 2025-10-13 12:24:01,805 | INFO     | [data] control thread has finished
[2025-10-13 08:24:50] 2025-10-13 12:24:02,014 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:24:50] 2025-10-13 12:24:02,067 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:24:50] 2025-10-13 12:24:02,113 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:24:50] 2025-10-13 12:24:02,117 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:24:50] 2025-10-13 12:24:02,177 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:24:50] 2025-10-13 12:24:02,308 | INFO     | [payload] control thread has finished
[2025-10-13 08:24:50] 2025-10-13 12:24:02,353 | INFO     | [job] validate thread has finished
[2025-10-13 08:24:50] 2025-10-13 12:24:02,473 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:24:50] 2025-10-13 12:24:02,983 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:24:50] 2025-10-13 12:24:03,073 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:24:50] 2025-10-13 12:24:06,992 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:24:50] 2025-10-13 12:24:33,233 | INFO     | PID=2032153 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 08:24:50] 2025-10-13 12:24:33,233 | INFO     | .. there are 41 such processes running
[2025-10-13 08:24:50] 2025-10-13 12:24:33,234 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:24:50] 2025-10-13 12:24:33,234 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:24:50] 2025-10-13 12:24:33,239 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:24:50] 2025-10-13 12:24:43,311 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:24:50] 2025-10-13 12:24:43,817 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140172496160576)>', '<ExcThread(monitor, started 140172012279552)>']
[2025-10-13 08:24:50] 2025-10-13 12:24:44,307 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:24:50] 2025-10-13 12:24:44,307 | INFO     | [monitor] control thread has ended
[2025-10-13 08:24:50] 2025-10-13 12:24:48,845 | INFO     | all workflow threads have been joined
[2025-10-13 08:24:50] 2025-10-13 12:24:48,858 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:24:50] 2025-10-13 12:24:48,859 | INFO     | traces error code: 0
[2025-10-13 08:24:50] 2025-10-13 12:24:48,860 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:24:50] 2025-10-13 12:24:49,238 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:24:50] 2025-10-13 12:24:49,266 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:24:50] 2025-10-13 12:24:49,270 [wrapper] pilotpid: 2032153
[2025-10-13 08:24:50] 2025-10-13 12:24:49,275 [wrapper] Pilot exit status: 0
[2025-10-13 08:24:50] 2025-10-13 12:24:49,341 [wrapper] pandaids: 6840962043
[2025-10-13 08:24:50] 2025-10-13 12:24:49,496 [wrapper] cleanup supervisor_pilot  424948 2032154
[2025-10-13 08:24:50] 2025-10-13 12:24:49,502 [wrapper] Test setup, not cleaning
[2025-10-13 08:24:50] 2025-10-13 12:24:49,512 [wrapper] apfmon messages muted
[2025-10-13 08:24:50] 2025-10-13 12:24:49,515 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:24:50] 2025-10-13 12:24:49,518 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:24:50]  *** Error codes and diagnostics ***
[2025-10-13 08:24:50]     "exeErrorCode": 0,
[2025-10-13 08:24:50]     "exeErrorDiag": "",
[2025-10-13 08:24:50]     "pilotErrorCode": 0,
[2025-10-13 08:24:50]     "pilotErrorDiag": "",
[2025-10-13 08:24:50]  *** Listing of results directory ***
[2025-10-13 08:24:50] total 415160
[2025-10-13 08:24:50] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 19:11 pilot3.tar.gz
[2025-10-13 08:24:50] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:17 queuedata.json
[2025-10-13 08:24:50] -rwx------. 1 boincer umatlas     36292 Oct 12 19:18 runpilot2-wrapper.sh
[2025-10-13 08:24:50] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:24:50] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:03 run_atlas
[2025-10-13 08:24:50] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:03 job.xml
[2025-10-13 08:24:50] -rw-r--r--. 2 boincer umatlas 222205582 Oct 13 00:03 EVNT.46676267._004651.pool.root.1
[2025-10-13 08:24:50] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 00:03 input.tar.gz
[2025-10-13 08:24:50] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:03 start_atlas.sh
[2025-10-13 08:24:50] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:03 shared
[2025-10-13 08:24:50] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:03 boinc_lockfile
[2025-10-13 08:24:50] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:03 pandaJob.out
[2025-10-13 08:24:50] -rw-------. 1 boincer umatlas    974373 Oct 13 00:04 agis_schedconf.cvmfs.json
[2025-10-13 08:24:50] drwx------. 5 boincer umatlas      4096 Oct 13 00:04 pilot3
[2025-10-13 08:24:50] -rw-------. 1 boincer umatlas 190551618 Oct 13 08:22 HITS.46676269._092030.pool.root.1
[2025-10-13 08:24:50] -rw-r--r--. 1 boincer umatlas       531 Oct 13 08:22 boinc_task_state.xml
[2025-10-13 08:24:50] -rw-r--r--. 1 boincer umatlas      6937 Oct 13 08:22 init_data.xml
[2025-10-13 08:24:50] -rw-------. 1 boincer umatlas      1046 Oct 13 08:23 memory_monitor_summary.json
[2025-10-13 08:24:50] -rw-------. 1 boincer umatlas   1560580 Oct 13 08:23 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:24:50] -rw-------. 1 boincer umatlas    704779 Oct 13 08:23 log.46676269._092030.job.log.tgz.1
[2025-10-13 08:24:50] -rw-------. 1 boincer umatlas      7818 Oct 13 08:23 heartbeat.json
[2025-10-13 08:24:50] -rw-------. 1 boincer umatlas        95 Oct 13 08:23 pilot_heartbeat.json
[2025-10-13 08:24:50] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 08:24 boinc_mmap_file
[2025-10-13 08:24:50] -rw-r--r--. 1 boincer umatlas        28 Oct 13 08:24 wrapper_checkpoint.txt
[2025-10-13 08:24:50] -rw-------. 1 boincer umatlas      5010 Oct 13 08:24 pilotlog.txt
[2025-10-13 08:24:50] -rw-------. 1 boincer umatlas   3529827 Oct 13 08:24 log.46676269._092030.job.log.1
[2025-10-13 08:24:50] -rw-------. 1 boincer umatlas       357 Oct 13 08:24 output.list
[2025-10-13 08:24:50] -rw-r--r--. 1 boincer umatlas       620 Oct 13 08:24 runtime_log
[2025-10-13 08:24:50] -rw-------. 1 boincer umatlas   4249600 Oct 13 08:24 result.tar.gz
[2025-10-13 08:24:50] -rw-r--r--. 1 boincer umatlas      8701 Oct 13 08:24 runtime_log.err
[2025-10-13 08:24:50] -rw-------. 1 boincer umatlas       660 Oct 13 08:24 nF4MDmiVKS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmM1lNDmeipeUn.diag
[2025-10-13 08:24:50] -rw-r--r--. 1 boincer umatlas     21290 Oct 13 08:24 stderr.txt
[2025-10-13 08:24:50] HITS file was successfully produced:
[2025-10-13 08:24:50] -rw-------. 1 boincer umatlas 190551618 Oct 13 08:22 shared/HITS.pool.root.1
[2025-10-13 08:24:50]  *** Contents of shared directory: ***
[2025-10-13 08:24:50] total 407820
[2025-10-13 08:24:50] -rw-r--r--. 2 boincer umatlas 222205582 Oct 13 00:03 ATLAS.root_0
[2025-10-13 08:24:50] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 00:03 input.tar.gz
[2025-10-13 08:24:50] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:03 start_atlas.sh
[2025-10-13 08:24:50] -rw-------. 1 boincer umatlas 190551618 Oct 13 08:22 HITS.pool.root.1
[2025-10-13 08:24:50] -rw-------. 1 boincer umatlas   4249600 Oct 13 08:24 result.tar.gz
08:24:52 (2026265): run_atlas exited; CPU time 37869.623158
08:24:52 (2026265): called boinc_finish(0)

</stderr_txt>
]]>

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