Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:57 (772214): wrapper (7.7.26015): starting
00:03:57 (772214): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 00:03:57] Arguments: --nthreads 9
[2025-10-13 00:03:57] Threads: 9
[2025-10-13 00:03:57] Checking for CVMFS
[2025-10-13 00:03:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:03:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:03:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:04:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:04:01] 2.13.2.0 1056763 130198 334440 151585 -2319 1184 27004015 32935936 24906 16776704 0 105978284 99.646 96840041 27785 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:04:01] CVMFS is ok
[2025-10-13 00:04:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:04:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:04:01] Further information can be found at the LHC@home message board.
[2025-10-13 00:04:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:04:01] Checking for apptainer binary...
[2025-10-13 00:04:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:04:01] Running /usr/bin/apptainer --version
[2025-10-13 00:04:01] apptainer version 1.4.3-1.el9
[2025-10-13 00:04:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:04:03] c-4-39.aglt2.org
[2025-10-13 00:04:03] apptainer works
[2025-10-13 00:04:03] Set ATHENA_PROC_NUMBER=9
[2025-10-13 00:04:03] Set ATHENA_CORE_NUMBER=9
[2025-10-13 00:04:03] Starting ATLAS job with PandaID=6840969427
[2025-10-13 00:04:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:04:43]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:04:43] 2025-10-13 12:03:44,928 | INFO     | chi2: 4.393885167808558
[2025-10-13 08:04:43] 2025-10-13 12:03:44,928 | INFO     | sum of square deviations: 30574552019.679626
[2025-10-13 08:04:43] 2025-10-13 12:03:44,934 | INFO     | sum of deviations: 462099880680.6058
[2025-10-13 08:04:43] 2025-10-13 12:03:44,935 | INFO     | mean x: 1760342586.5627706
[2025-10-13 08:04:43] 2025-10-13 12:03:44,935 | INFO     | mean y: 2272769.1515151514
[2025-10-13 08:04:43] 2025-10-13 12:03:44,935 | INFO     | -- intersect: -26603320623.81323
[2025-10-13 08:04:43] 2025-10-13 12:03:44,935 | INFO     | intersect: -26603320623.81323
[2025-10-13 08:04:43] 2025-10-13 12:03:44,936 | INFO     | chi2: 4.3606954046763775
[2025-10-13 08:04:43] 2025-10-13 12:03:44,936 | INFO     | current chi2=4.3606954046763775 (change=0.7553625519242695 %)
[2025-10-13 08:04:43] 2025-10-13 12:03:44,936 | INFO     | right removable region: 461
[2025-10-13 08:04:43] 2025-10-13 12:03:44,937 | INFO     | sum of square deviations: 30574309239.92196
[2025-10-13 08:04:43] 2025-10-13 12:03:44,943 | INFO     | sum of deviations: 335205207237.1818
[2025-10-13 08:04:43] 2025-10-13 12:03:44,943 | INFO     | mean x: 1760342891.5584416
[2025-10-13 08:04:43] 2025-10-13 12:03:44,943 | INFO     | mean y: 2292168.0303030303
[2025-10-13 08:04:43] 2025-10-13 12:03:44,943 | INFO     | -- intersect: -19297444062.898636
[2025-10-13 08:04:43] 2025-10-13 12:03:44,944 | INFO     | intersect: -19297444062.898636
[2025-10-13 08:04:43] 2025-10-13 12:03:44,944 | INFO     | chi2: 1.1826723259549015
[2025-10-13 08:04:43] 2025-10-13 12:03:44,944 | INFO     | current chi2=1.1826723259549015 (change=73.08367695588282 %)
[2025-10-13 08:04:43] 2025-10-13 12:03:44,945 | INFO     | sum of square deviations: 29592170533.15965
[2025-10-13 08:04:43] 2025-10-13 12:03:44,951 | INFO     | sum of deviations: 272610655291.07443
[2025-10-13 08:04:43] 2025-10-13 12:03:44,951 | INFO     | mean x: 1760343044.0634573
[2025-10-13 08:04:43] 2025-10-13 12:03:44,951 | INFO     | mean y: 2301882.6870897156
[2025-10-13 08:04:43] 2025-10-13 12:03:44,951 | INFO     | -- intersect: -16214429169.24716
[2025-10-13 08:04:43] 2025-10-13 12:03:44,952 | INFO     | intersect: -16214429169.24716
[2025-10-13 08:04:43] 2025-10-13 12:03:44,952 | INFO     | chi2: 0.5561137441911168
[2025-10-13 08:04:43] 2025-10-13 12:03:44,952 | INFO     | current chi2=0.5561137441911168 (change=52.97820605195061 %)
[2025-10-13 08:04:43] 2025-10-13 12:03:44,953 | INFO     | sum of square deviations: 28631316039.008774
[2025-10-13 08:04:43] 2025-10-13 12:03:44,959 | INFO     | sum of deviations: 237060802520.17676
[2025-10-13 08:04:43] 2025-10-13 12:03:44,959 | INFO     | mean x: 1760343196.5663717
[2025-10-13 08:04:43] 2025-10-13 12:03:44,959 | INFO     | mean y: 2307519.3274336285
[2025-10-13 08:04:43] 2025-10-13 12:03:44,959 | INFO     | -- intersect: -14572934859.346148
[2025-10-13 08:04:43] 2025-10-13 12:03:44,959 | INFO     | intersect: -14572934859.346148
[2025-10-13 08:04:43] 2025-10-13 12:03:44,960 | INFO     | chi2: 0.38234578902102717
[2025-10-13 08:04:43] 2025-10-13 12:03:44,960 | INFO     | current chi2=0.38234578902102717 (change=31.246836997859145 %)
[2025-10-13 08:04:43] 2025-10-13 12:03:44,961 | INFO     | sum of square deviations: 27691511783.986637
[2025-10-13 08:04:43] 2025-10-13 12:03:44,967 | INFO     | sum of deviations: 214024200174.121
[2025-10-13 08:04:43] 2025-10-13 12:03:44,967 | INFO     | mean x: 1760343349.067114
[2025-10-13 08:04:43] 2025-10-13 12:03:44,967 | INFO     | mean y: 2311249.729306488
[2025-10-13 08:04:43] 2025-10-13 12:03:44,967 | INFO     | -- intersect: -13603160356.69241
[2025-10-13 08:04:43] 2025-10-13 12:03:44,967 | INFO     | intersect: -13603160356.69241
[2025-10-13 08:04:43] 2025-10-13 12:03:44,968 | INFO     | chi2: 0.31678806525579223
[2025-10-13 08:04:43] 2025-10-13 12:03:44,968 | INFO     | current chi2=0.31678806525579223 (change=17.146186945877307 %)
[2025-10-13 08:04:43] 2025-10-13 12:03:44,968 | INFO     | left removable region: 40
[2025-10-13 08:04:43] 2025-10-13 12:03:44,969 | INFO     | sum of square deviations: 23134537499.38719
[2025-10-13 08:04:43] 2025-10-13 12:03:44,974 | INFO     | sum of deviations: 175388276687.78146
[2025-10-13 08:04:43] 2025-10-13 12:03:44,975 | INFO     | mean x: 1760343776.0926366
[2025-10-13 08:04:43] 2025-10-13 12:03:44,975 | INFO     | mean y: 2318010.8004750595
[2025-10-13 08:04:43] 2025-10-13 12:03:44,975 | INFO     | -- intersect: -13343255086.354706
[2025-10-13 08:04:43] 2025-10-13 12:03:44,975 | INFO     | intersect: -13343255086.354706
[2025-10-13 08:04:43] 2025-10-13 12:03:44,976 | INFO     | chi2: 0.27176651899047694
[2025-10-13 08:04:43] 2025-10-13 12:03:44,976 | INFO     | -- intersect: -13343255086.354706
[2025-10-13 08:04:43] 2025-10-13 12:03:44,976 | INFO     | current memory leak: 7.58 B/s (using 421 data points, chi2=0.27)
[2025-10-13 08:04:43] 2025-10-13 12:03:44,977 | INFO     | could have reported an average CPU frequency of 2601 MHz (19 samples)
[2025-10-13 08:04:43] 2025-10-13 12:03:44,977 | INFO     | ..............................
[2025-10-13 08:04:43] 2025-10-13 12:03:44,977 | INFO     | . Timing measurements:
[2025-10-13 08:04:43] 2025-10-13 12:03:44,977 | INFO     | . get job = 1 s
[2025-10-13 08:04:43] 2025-10-13 12:03:44,978 | INFO     | . initial setup = 8 s
[2025-10-13 08:04:43] 2025-10-13 12:03:44,978 | INFO     | . payload setup = 54 s
[2025-10-13 08:04:43] 2025-10-13 12:03:44,978 | INFO     | . stage-in = 0 s
[2025-10-13 08:04:43] 2025-10-13 12:03:44,978 | INFO     | . payload execution = 28527 s
[2025-10-13 08:04:43] 2025-10-13 12:03:44,978 | INFO     | . stage-out = 2 s
[2025-10-13 08:04:43] 2025-10-13 12:03:44,978 | INFO     | . log creation = 0 s
[2025-10-13 08:04:43] 2025-10-13 12:03:44,978 | INFO     | ..............................
[2025-10-13 08:04:43] 2025-10-13 12:03:45,206 | INFO     | 
[2025-10-13 08:04:43] 2025-10-13 12:03:45,207 | INFO     | job summary report
[2025-10-13 08:04:43] 2025-10-13 12:03:45,207 | INFO     | --------------------------------------------------
[2025-10-13 08:04:43] 2025-10-13 12:03:45,207 | INFO     | PanDA job id: 6840969427
[2025-10-13 08:04:43] 2025-10-13 12:03:45,207 | INFO     | task id: 46676269
[2025-10-13 08:04:43] 2025-10-13 12:03:45,207 | INFO     | errors: (none)
[2025-10-13 08:04:43] 2025-10-13 12:03:45,207 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:04:43] 2025-10-13 12:03:45,207 | INFO     | pilot state: finished 
[2025-10-13 08:04:43] 2025-10-13 12:03:45,208 | INFO     | transexitcode: 0
[2025-10-13 08:04:43] 2025-10-13 12:03:45,208 | INFO     | exeerrorcode: 0
[2025-10-13 08:04:43] 2025-10-13 12:03:45,208 | INFO     | exeerrordiag: 
[2025-10-13 08:04:43] 2025-10-13 12:03:45,208 | INFO     | exitcode: 0
[2025-10-13 08:04:43] 2025-10-13 12:03:45,208 | INFO     | exitmsg: OK
[2025-10-13 08:04:43] 2025-10-13 12:03:45,208 | INFO     | cpuconsumptiontime: 51015 s
[2025-10-13 08:04:43] 2025-10-13 12:03:45,208 | INFO     | nevents: 400
[2025-10-13 08:04:43] 2025-10-13 12:03:45,208 | INFO     | neventsw: 0
[2025-10-13 08:04:43] 2025-10-13 12:03:45,208 | INFO     | pid: 796512
[2025-10-13 08:04:43] 2025-10-13 12:03:45,208 | INFO     | pgrp: 796512
[2025-10-13 08:04:43] 2025-10-13 12:03:45,209 | INFO     | corecount: 9
[2025-10-13 08:04:43] 2025-10-13 12:03:45,209 | INFO     | event service: False
[2025-10-13 08:04:43] 2025-10-13 12:03:45,209 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348714, 4: 2348742, 5: 2348997, 6: 2348997, 18: 2349153, 29: 2349181, 41: 2349209, 50: 2349499, 52: 2349527, 28585: 2386716, 28
[2025-10-13 08:04:43] 2025-10-13 12:03:45,209 | INFO     | --------------------------------------------------
[2025-10-13 08:04:43] 2025-10-13 12:03:45,209 | INFO     | 
[2025-10-13 08:04:43] 2025-10-13 12:03:45,209 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 08:04:43] 2025-10-13 12:03:45,228 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:04:43] 2025-10-13 12:03:45,229 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:04:43] 2025-10-13 12:03:45,229 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:04:43] 2025-10-13 12:03:45,229 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:04:43] 2025-10-13 12:03:45,229 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:04:43] 2025-10-13 12:03:45,229 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:04:43] 2025-10-13 12:03:45,229 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:04:43] 2025-10-13 12:03:45,229 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:04:43] 2025-10-13 12:03:45,229 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:04:43] 2025-10-13 12:03:45,230 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:04:43] 2025-10-13 12:03:45,230 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:04:43] 2025-10-13 12:03:45,230 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:04:43] 2025-10-13 12:03:45,230 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:04:43] 2025-10-13 12:03:45,230 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:04:43] 2025-10-13 12:03:45,230 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:04:43] 2025-10-13 12:03:45,230 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:04:43] 2025-10-13 12:03:45,230 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:04:43] 2025-10-13 12:03:45,231 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:04:43] 2025-10-13 12:03:45,231 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:04:43] 2025-10-13 12:03:45,231 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:04:43] 2025-10-13 12:03:45,231 | INFO     | job 6840969427 has completed (purged errors)
[2025-10-13 08:04:43] 2025-10-13 12:03:45,231 | INFO     | overall cleanup function is called
[2025-10-13 08:04:43] 2025-10-13 12:03:46,241 | INFO     | --- collectZombieJob: --- 10, [796512]
[2025-10-13 08:04:43] 2025-10-13 12:03:46,241 | INFO     | zombie collector waiting for pid 796512
[2025-10-13 08:04:43] 2025-10-13 12:03:46,241 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:04:43] 2025-10-13 12:03:46,241 | INFO     | collected zombie processes
[2025-10-13 08:04:43] 2025-10-13 12:03:46,242 | INFO     | will attempt to kill all subprocesses of pid=796512
[2025-10-13 08:04:43] 2025-10-13 12:03:46,545 | INFO     | process IDs to be killed: [796512] (in reverse order)
[2025-10-13 08:04:43] 2025-10-13 12:03:46,641 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:04:43] 2025-10-13 12:03:46,642 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:04:43] 2025-10-13 12:03:46,654 | INFO     | did not find any defunct processes belonging to 796512
[2025-10-13 08:04:43] 2025-10-13 12:03:46,666 | INFO     | did not find any defunct processes belonging to 796512
[2025-10-13 08:04:43] 2025-10-13 12:03:46,666 | INFO     | ready for new job
[2025-10-13 08:04:43] 2025-10-13 12:03:46,666 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:04:43] 2025-10-13 12:03:46,669 | INFO     | ***************************************
[2025-10-13 08:04:43] 2025-10-13 12:03:46,669 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:04:43] 2025-10-13 12:03:46,670 | INFO     | ***************************************
[2025-10-13 08:04:43] 2025-10-13 12:03:46,670 | INFO     | 
[2025-10-13 08:04:43] 2025-10-13 12:03:46,685 | INFO     | architecture information:
[2025-10-13 08:04:43] 2025-10-13 12:03:46,685 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:04:43] 2025-10-13 12:03:46,704 | INFO     | cat /etc/os-release:
[2025-10-13 08:04:43] NAME="CentOS Linux"
[2025-10-13 08:04:43] VERSION="7 (Core)"
[2025-10-13 08:04:43] ID="centos"
[2025-10-13 08:04:43] ID_LIKE="rhel fedora"
[2025-10-13 08:04:43] VERSION_ID="7"
[2025-10-13 08:04:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:04:43] ANSI_COLOR="0;31"
[2025-10-13 08:04:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:04:43] HOME_URL="https://www.centos.org/"
[2025-10-13 08:04:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:04:43] 
[2025-10-13 08:04:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:04:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:04:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:04:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:04:43] 
[2025-10-13 08:04:43] 2025-10-13 12:03:46,705 | INFO     | ***************************************
[2025-10-13 08:04:43] 2025-10-13 12:03:47,207 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 08:04:43] 2025-10-13 12:03:47,228 | INFO     | sufficient remaining disk space (75666292736 B)
[2025-10-13 08:04:43] 2025-10-13 12:03:47,228 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:04:43] 2025-10-13 12:03:47,228 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:04:43] 2025-10-13 12:03:47,229 | INFO     | update_server=False
[2025-10-13 08:04:43] 2025-10-13 12:03:47,229 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:04:43] 2025-10-13 12:03:47,409 | INFO     | all job control threads have been joined
[2025-10-13 08:04:43] 2025-10-13 12:03:47,461 | INFO     | all payload control threads have been joined
[2025-10-13 08:04:43] 2025-10-13 12:03:47,668 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 08:04:43] 2025-10-13 12:03:47,668 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 08:04:43] 2025-10-13 12:03:47,669 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:04:43] 2025-10-13 12:03:47,669 | INFO     | will abort loop
[2025-10-13 08:04:43] 2025-10-13 12:03:47,777 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:04:43] 2025-10-13 12:03:48,247 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:04:43] 2025-10-13 12:03:48,326 | INFO     | all data control threads have been joined
[2025-10-13 08:04:43] 2025-10-13 12:03:48,414 | INFO     | [job] control thread has finished
[2025-10-13 08:04:43] 2025-10-13 12:03:48,467 | INFO     | [payload] control thread has finished
[2025-10-13 08:04:43] 2025-10-13 12:03:48,477 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:04:43] 2025-10-13 12:03:48,675 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:04:43] 2025-10-13 12:03:49,037 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:04:43] 2025-10-13 12:03:49,077 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:04:43] 2025-10-13 12:03:49,139 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:04:43] 2025-10-13 12:03:49,190 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:04:43] 2025-10-13 12:03:49,331 | INFO     | [data] control thread has finished
[2025-10-13 08:04:43] 2025-10-13 12:03:49,334 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:04:43] 2025-10-13 12:03:49,519 | INFO     | [job] validate thread has finished
[2025-10-13 08:04:43] 2025-10-13 12:03:49,579 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:04:43] 2025-10-13 12:03:49,735 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:04:43] 2025-10-13 12:03:49,783 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:04:43] 2025-10-13 12:03:50,104 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:04:43] 2025-10-13 12:03:51,109 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:04:43] 2025-10-13 12:03:53,145 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:04:43] 2025-10-13 12:04:18,159 | INFO     | PID=781122 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 08:04:43] 2025-10-13 12:04:18,159 | INFO     | .. there are 24 such processes running
[2025-10-13 08:04:43] 2025-10-13 12:04:18,159 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:04:43] 2025-10-13 12:04:18,159 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:04:43] 2025-10-13 12:04:18,159 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:04:43] 2025-10-13 12:04:36,839 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:04:43] 2025-10-13 12:04:37,796 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140518561716032)>', '<ExcThread(monitor, started 140517773932288)>']
[2025-10-13 08:04:43] 2025-10-13 12:04:38,261 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:04:43] 2025-10-13 12:04:38,261 | INFO     | [monitor] control thread has ended
[2025-10-13 08:04:43] 2025-10-13 12:04:42,821 | INFO     | all workflow threads have been joined
[2025-10-13 08:04:43] 2025-10-13 12:04:42,821 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:04:43] 2025-10-13 12:04:42,822 | INFO     | traces error code: 0
[2025-10-13 08:04:43] 2025-10-13 12:04:42,822 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:04:43] 2025-10-13 12:04:42,999 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:04:43] 2025-10-13 12:04:43,002 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:04:43] 2025-10-13 12:04:43,005 [wrapper] pilotpid: 781122
[2025-10-13 08:04:43] 2025-10-13 12:04:43,008 [wrapper] Pilot exit status: 0
[2025-10-13 08:04:43] 2025-10-13 12:04:43,020 [wrapper] pandaids: 6840969427
[2025-10-13 08:04:43] 2025-10-13 12:04:43,089 [wrapper] cleanup supervisor_pilot 2181430 781123
[2025-10-13 08:04:43] 2025-10-13 12:04:43,091 [wrapper] Test setup, not cleaning
[2025-10-13 08:04:43] 2025-10-13 12:04:43,094 [wrapper] apfmon messages muted
[2025-10-13 08:04:43] 2025-10-13 12:04:43,096 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:04:43] 2025-10-13 12:04:43,102 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:04:43]  *** Error codes and diagnostics ***
[2025-10-13 08:04:43]     "exeErrorCode": 0,
[2025-10-13 08:04:43]     "exeErrorDiag": "",
[2025-10-13 08:04:43]     "pilotErrorCode": 0,
[2025-10-13 08:04:43]     "pilotErrorDiag": "",
[2025-10-13 08:04:43]  *** Listing of results directory ***
[2025-10-13 08:04:43] total 416532
[2025-10-13 08:04:43] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 19:11 pilot3.tar.gz
[2025-10-13 08:04:43] -rwx------. 1 boincer umatlas     36292 Oct 12 19:35 runpilot2-wrapper.sh
[2025-10-13 08:04:43] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:35 queuedata.json
[2025-10-13 08:04:43] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:04:43] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:03 run_atlas
[2025-10-13 08:04:43] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:03 job.xml
[2025-10-13 08:04:43] -rw-r--r--. 2 boincer umatlas 219615921 Oct 13 00:03 EVNT.46676267._004660.pool.root.1
[2025-10-13 08:04:43] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:03 start_atlas.sh
[2025-10-13 08:04:43] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:03 shared
[2025-10-13 08:04:43] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 00:03 input.tar.gz
[2025-10-13 08:04:43] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:03 boinc_lockfile
[2025-10-13 08:04:43] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:04 pandaJob.out
[2025-10-13 08:04:43] -rw-------. 1 boincer umatlas    975520 Oct 13 00:05 agis_schedconf.cvmfs.json
[2025-10-13 08:04:43] drwx------. 5 boincer umatlas      4096 Oct 13 00:05 pilot3
[2025-10-13 08:04:43] -rw-------. 1 boincer umatlas 194874392 Oct 13 08:02 HITS.46676269._092273.pool.root.1
[2025-10-13 08:04:43] -rw-r--r--. 1 boincer umatlas       531 Oct 13 08:03 boinc_task_state.xml
[2025-10-13 08:04:43] -rw-r--r--. 1 boincer umatlas      6658 Oct 13 08:03 init_data.xml
[2025-10-13 08:04:43] -rw-------. 1 boincer umatlas        95 Oct 13 08:03 pilot_heartbeat.json
[2025-10-13 08:04:43] -rw-------. 1 boincer umatlas      1044 Oct 13 08:03 memory_monitor_summary.json
[2025-10-13 08:04:43] -rw-------. 1 boincer umatlas   1560580 Oct 13 08:03 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:04:43] -rw-------. 1 boincer umatlas    642800 Oct 13 08:03 log.46676269._092273.job.log.tgz.1
[2025-10-13 08:04:43] -rw-------. 1 boincer umatlas      7825 Oct 13 08:03 heartbeat.json
[2025-10-13 08:04:43] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 08:04 boinc_mmap_file
[2025-10-13 08:04:43] -rw-r--r--. 1 boincer umatlas        28 Oct 13 08:04 wrapper_checkpoint.txt
[2025-10-13 08:04:43] -rw-------. 1 boincer umatlas      5009 Oct 13 08:04 pilotlog.txt
[2025-10-13 08:04:43] -rw-------. 1 boincer umatlas   3423799 Oct 13 08:04 log.46676269._092273.job.log.1
[2025-10-13 08:04:43] -rw-------. 1 boincer umatlas       357 Oct 13 08:04 output.list
[2025-10-13 08:04:43] -rw-r--r--. 1 boincer umatlas       620 Oct 13 08:04 runtime_log
[2025-10-13 08:04:43] -rw-------. 1 boincer umatlas   4085760 Oct 13 08:04 result.tar.gz
[2025-10-13 08:04:43] -rw-------. 1 boincer umatlas       654 Oct 13 08:04 TJRMDm0lKS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm53lNDm0CGM3n.diag
[2025-10-13 08:04:43] -rw-r--r--. 1 boincer umatlas      8694 Oct 13 08:04 runtime_log.err
[2025-10-13 08:04:43] -rw-r--r--. 1 boincer umatlas     21085 Oct 13 08:04 stderr.txt
[2025-10-13 08:04:43] HITS file was successfully produced:
[2025-10-13 08:04:43] -rw-------. 1 boincer umatlas 194874392 Oct 13 08:02 shared/HITS.pool.root.1
[2025-10-13 08:04:43]  *** Contents of shared directory: ***
[2025-10-13 08:04:43] total 409356
[2025-10-13 08:04:43] -rw-r--r--. 2 boincer umatlas 219615921 Oct 13 00:03 ATLAS.root_0
[2025-10-13 08:04:43] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:03 start_atlas.sh
[2025-10-13 08:04:43] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 00:03 input.tar.gz
[2025-10-13 08:04:43] -rw-------. 1 boincer umatlas 194874392 Oct 13 08:02 HITS.pool.root.1
[2025-10-13 08:04:43] -rw-------. 1 boincer umatlas   4085760 Oct 13 08:04 result.tar.gz
08:04:44 (772214): run_atlas exited; CPU time 52073.613211
08:04:44 (772214): called boinc_finish(0)

</stderr_txt>
]]>

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