Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:46:00 (3352294): wrapper (7.7.26015): starting
02:46:00 (3352294): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 02:46:00] Arguments: --nthreads 9
[2025-10-13 02:46:00] Threads: 9
[2025-10-13 02:46:00] Checking for CVMFS
[2025-10-13 02:46:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:46:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:46:01] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:46:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:46:02] 2.13.2.0 128519 117073 278716 151652 3 64 34059552 39288832 7400 16776704 1 84211308 99.658 75453413 34338 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 02:46:02] CVMFS is ok
[2025-10-13 02:46:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:46:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:46:02] Further information can be found at the LHC@home message board.
[2025-10-13 02:46:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:46:02] Checking for apptainer binary...
[2025-10-13 02:46:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:46:02] Running /usr/bin/apptainer --version
[2025-10-13 02:46:02] apptainer version 1.4.3-1.el9
[2025-10-13 02:46:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:46:02] c-211-3.aglt2.org
[2025-10-13 02:46:02] apptainer works
[2025-10-13 02:46:02] Set ATHENA_PROC_NUMBER=9
[2025-10-13 02:46:02] Set ATHENA_CORE_NUMBER=9
[2025-10-13 02:46:02] Starting ATLAS job with PandaID=6840969172
[2025-10-13 02:46:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:01:50]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:01:50] 2025-10-13 09:00:58,769 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:01:50] 2025-10-13 09:00:58,769 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:01:50] 2025-10-13 09:00:58,773 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:01:50] 2025-10-13 09:00:58,773 | INFO     | sum of square deviations: 713128924.628787
[2025-10-13 05:01:50] 2025-10-13 09:00:58,774 | INFO     | sum of deviations: -14735938443.833336
[2025-10-13 05:01:50] 2025-10-13 09:00:58,774 | INFO     | mean x: 1760342020.5530303
[2025-10-13 05:01:50] 2025-10-13 09:00:58,774 | INFO     | mean y: 2586001.8333333335
[2025-10-13 05:01:50] 2025-10-13 09:00:58,774 | INFO     | -- intersect: 36377904347.62283
[2025-10-13 05:01:50] 2025-10-13 09:00:58,775 | INFO     | intersect: 36377904347.62283
[2025-10-13 05:01:50] 2025-10-13 09:00:58,775 | INFO     | chi2: 2.4533516631942938
[2025-10-13 05:01:50] 2025-10-13 09:00:58,775 | INFO     | sum of square deviations: 635120294.6141721
[2025-10-13 05:01:50] 2025-10-13 09:00:58,776 | INFO     | sum of deviations: -5556243434.220476
[2025-10-13 05:01:50] 2025-10-13 09:00:58,776 | INFO     | mean x: 1760341868.055118
[2025-10-13 05:01:50] 2025-10-13 09:00:58,776 | INFO     | mean y: 2603444.031496063
[2025-10-13 05:01:50] 2025-10-13 09:00:58,777 | INFO     | -- intersect: 15402659196.157051
[2025-10-13 05:01:50] 2025-10-13 09:00:58,777 | INFO     | intersect: 15402659196.157051
[2025-10-13 05:01:50] 2025-10-13 09:00:58,777 | INFO     | chi2: 1.7840143389562195
[2025-10-13 05:01:50] 2025-10-13 09:00:58,777 | INFO     | current chi2=1.7840143389562195 (change=27.282567529132322 %)
[2025-10-13 05:01:50] 2025-10-13 09:00:58,778 | INFO     | sum of square deviations: 563018752.0983618
[2025-10-13 05:01:50] 2025-10-13 09:00:58,778 | INFO     | sum of deviations: -4944034725.672133
[2025-10-13 05:01:50] 2025-10-13 09:00:58,779 | INFO     | mean x: 1760341715.557377
[2025-10-13 05:01:50] 2025-10-13 09:00:58,779 | INFO     | mean y: 2604739.524590164
[2025-10-13 05:01:50] 2025-10-13 09:00:58,779 | INFO     | -- intersect: 15460687686.723558
[2025-10-13 05:01:50] 2025-10-13 09:00:58,779 | INFO     | intersect: 15460687686.723558
[2025-10-13 05:01:50] 2025-10-13 09:00:58,779 | INFO     | chi2: 1.7839116577905196
[2025-10-13 05:01:50] 2025-10-13 09:00:58,779 | INFO     | current chi2=1.7839116577905196 (change=0.005755624462075103 %)
[2025-10-13 05:01:50] 2025-10-13 09:00:58,780 | INFO     | right removable region: 121
[2025-10-13 05:01:50] 2025-10-13 09:00:58,780 | INFO     | sum of square deviations: 635116024.6141721
[2025-10-13 05:01:50] 2025-10-13 09:00:58,781 | INFO     | sum of deviations: -35431911203.732285
[2025-10-13 05:01:50] 2025-10-13 09:00:58,781 | INFO     | mean x: 1760342173.055118
[2025-10-13 05:01:50] 2025-10-13 09:00:58,781 | INFO     | mean y: 2625764.818897638
[2025-10-13 05:01:50] 2025-10-13 09:00:58,781 | INFO     | -- intersect: 98208756844.19882
[2025-10-13 05:01:50] 2025-10-13 09:00:58,781 | INFO     | intersect: 98208756844.19882
[2025-10-13 05:01:50] 2025-10-13 09:00:58,782 | INFO     | chi2: 0.9235913802199316
[2025-10-13 05:01:50] 2025-10-13 09:00:58,782 | INFO     | current chi2=0.9235913802199316 (change=62.353893488819935 %)
[2025-10-13 05:01:50] 2025-10-13 09:00:58,782 | INFO     | sum of square deviations: 563025460.2950817
[2025-10-13 05:01:50] 2025-10-13 09:00:58,783 | INFO     | sum of deviations: -31706640918.47539
[2025-10-13 05:01:50] 2025-10-13 09:00:58,783 | INFO     | mean x: 1760342325.5409837
[2025-10-13 05:01:50] 2025-10-13 09:00:58,783 | INFO     | mean y: 2617793.295081967
[2025-10-13 05:01:50] 2025-10-13 09:00:58,783 | INFO     | -- intersect: 99135864769.8518
[2025-10-13 05:01:50] 2025-10-13 09:00:58,783 | INFO     | intersect: 99135864769.8518
[2025-10-13 05:01:50] 2025-10-13 09:00:58,784 | INFO     | chi2: 0.9136486652922372
[2025-10-13 05:01:50] 2025-10-13 09:00:58,784 | INFO     | current chi2=0.9136486652922372 (change=1.0765274709825423 %)
[2025-10-13 05:01:50] 2025-10-13 09:00:58,784 | INFO     | left removable region: 20
[2025-10-13 05:01:50] 2025-10-13 09:00:58,784 | INFO     | sum of square deviations: 319454441.8415838
[2025-10-13 05:01:50] 2025-10-13 09:00:58,785 | INFO     | sum of deviations: -11051765904.14851
[2025-10-13 05:01:50] 2025-10-13 09:00:58,785 | INFO     | mean x: 1760342295.039604
[2025-10-13 05:01:50] 2025-10-13 09:00:58,785 | INFO     | mean y: 2611905.287128713
[2025-10-13 05:01:50] 2025-10-13 09:00:58,785 | INFO     | -- intersect: 60902973295.7756
[2025-10-13 05:01:50] 2025-10-13 09:00:58,786 | INFO     | intersect: 60902973295.7756
[2025-10-13 05:01:50] 2025-10-13 09:00:58,786 | INFO     | chi2: 0.15805598974038343
[2025-10-13 05:01:50] 2025-10-13 09:00:58,786 | INFO     | -- intersect: 60902973295.7756
[2025-10-13 05:01:50] 2025-10-13 09:00:58,786 | INFO     | current memory leak: -34.60 B/s (using 101 data points, chi2=0.16)
[2025-10-13 05:01:50] 2025-10-13 09:00:58,787 | INFO     | could have reported an average CPU frequency of 2581 MHz (8 samples)
[2025-10-13 05:01:50] 2025-10-13 09:00:58,787 | INFO     | ..............................
[2025-10-13 05:01:50] 2025-10-13 09:00:58,787 | INFO     | . Timing measurements:
[2025-10-13 05:01:50] 2025-10-13 09:00:58,787 | INFO     | . get job = 0 s
[2025-10-13 05:01:50] 2025-10-13 09:00:58,787 | INFO     | . initial setup = 2 s
[2025-10-13 05:01:50] 2025-10-13 09:00:58,787 | INFO     | . payload setup = 8 s
[2025-10-13 05:01:50] 2025-10-13 09:00:58,787 | INFO     | . stage-in = 0 s
[2025-10-13 05:01:50] 2025-10-13 09:00:58,788 | INFO     | . payload execution = 8018 s
[2025-10-13 05:01:50] 2025-10-13 09:00:58,788 | INFO     | . stage-out = 2 s
[2025-10-13 05:01:50] 2025-10-13 09:00:58,788 | INFO     | . log creation = 0 s
[2025-10-13 05:01:50] 2025-10-13 09:00:58,788 | INFO     | ..............................
[2025-10-13 05:01:50] 2025-10-13 09:00:58,887 | INFO     | time since job start (8067s) is within the limit (172800.0s)
[2025-10-13 05:01:50] 2025-10-13 09:00:58,914 | INFO     | 
[2025-10-13 05:01:50] 2025-10-13 09:00:58,915 | INFO     | job summary report
[2025-10-13 05:01:50] 2025-10-13 09:00:58,915 | INFO     | --------------------------------------------------
[2025-10-13 05:01:50] 2025-10-13 09:00:58,915 | INFO     | PanDA job id: 6840969172
[2025-10-13 05:01:50] 2025-10-13 09:00:58,915 | INFO     | task id: 46676269
[2025-10-13 05:01:50] 2025-10-13 09:00:58,915 | INFO     | errors: (none)
[2025-10-13 05:01:50] 2025-10-13 09:00:58,915 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:01:50] 2025-10-13 09:00:58,915 | INFO     | pilot state: finished 
[2025-10-13 05:01:50] 2025-10-13 09:00:58,916 | INFO     | transexitcode: 0
[2025-10-13 05:01:50] 2025-10-13 09:00:58,916 | INFO     | exeerrorcode: 0
[2025-10-13 05:01:50] 2025-10-13 09:00:58,916 | INFO     | exeerrordiag: 
[2025-10-13 05:01:50] 2025-10-13 09:00:58,916 | INFO     | exitcode: 0
[2025-10-13 05:01:50] 2025-10-13 09:00:58,916 | INFO     | exitmsg: OK
[2025-10-13 05:01:50] 2025-10-13 09:00:58,916 | INFO     | cpuconsumptiontime: 50252 s
[2025-10-13 05:01:50] 2025-10-13 09:00:58,916 | INFO     | nevents: 400
[2025-10-13 05:01:50] 2025-10-13 09:00:58,916 | INFO     | neventsw: 0
[2025-10-13 05:01:50] 2025-10-13 09:00:58,916 | INFO     | pid: 3362390
[2025-10-13 05:01:50] 2025-10-13 09:00:58,916 | INFO     | pgrp: 3362390
[2025-10-13 05:01:50] 2025-10-13 09:00:58,916 | INFO     | corecount: 9
[2025-10-13 05:01:50] 2025-10-13 09:00:58,917 | INFO     | event service: False
[2025-10-13 05:01:50] 2025-10-13 09:00:58,917 | INFO     | sizes: {0: 2348630, 1: 2348885, 2: 2348885, 7: 2349175, 12: 2349203, 8030: 2377066, 8034: 2386064, 8036: 2386120, 8049: 2386342}
[2025-10-13 05:01:50] 2025-10-13 09:00:58,917 | INFO     | --------------------------------------------------
[2025-10-13 05:01:50] 2025-10-13 09:00:58,917 | INFO     | 
[2025-10-13 05:01:50] 2025-10-13 09:00:58,917 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 05:01:50] 2025-10-13 09:00:58,938 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:01:50] 2025-10-13 09:00:58,939 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:01:50] 2025-10-13 09:00:58,939 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:01:50] 2025-10-13 09:00:58,939 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:01:50] 2025-10-13 09:00:58,939 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:01:50] 2025-10-13 09:00:58,939 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:01:50] 2025-10-13 09:00:58,940 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:01:50] 2025-10-13 09:00:58,940 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:01:50] 2025-10-13 09:00:58,940 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:01:50] 2025-10-13 09:00:58,940 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:01:50] 2025-10-13 09:00:58,940 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:01:50] 2025-10-13 09:00:58,940 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:01:50] 2025-10-13 09:00:58,940 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:01:50] 2025-10-13 09:00:58,941 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:01:50] 2025-10-13 09:00:58,941 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:01:50] 2025-10-13 09:00:58,941 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:01:50] 2025-10-13 09:00:58,941 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:01:50] 2025-10-13 09:00:58,941 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:01:50] 2025-10-13 09:00:58,941 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:01:50] 2025-10-13 09:00:58,941 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:01:50] 2025-10-13 09:00:58,942 | INFO     | job 6840969172 has completed (purged errors)
[2025-10-13 05:01:50] 2025-10-13 09:00:58,942 | INFO     | overall cleanup function is called
[2025-10-13 05:01:50] 2025-10-13 09:00:59,951 | INFO     | --- collectZombieJob: --- 10, [3362390]
[2025-10-13 05:01:50] 2025-10-13 09:00:59,951 | INFO     | zombie collector waiting for pid 3362390
[2025-10-13 05:01:50] 2025-10-13 09:00:59,951 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:01:50] 2025-10-13 09:00:59,951 | INFO     | collected zombie processes
[2025-10-13 05:01:50] 2025-10-13 09:00:59,951 | INFO     | will attempt to kill all subprocesses of pid=3362390
[2025-10-13 05:01:50] 2025-10-13 09:01:00,190 | INFO     | process IDs to be killed: [3362390] (in reverse order)
[2025-10-13 05:01:50] 2025-10-13 09:01:00,262 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:01:50] 2025-10-13 09:01:00,262 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:01:50] 2025-10-13 09:01:00,272 | INFO     | did not find any defunct processes belonging to 3362390
[2025-10-13 05:01:50] 2025-10-13 09:01:00,281 | INFO     | did not find any defunct processes belonging to 3362390
[2025-10-13 05:01:50] 2025-10-13 09:01:00,282 | INFO     | ready for new job
[2025-10-13 05:01:50] 2025-10-13 09:01:00,282 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:01:50] 2025-10-13 09:01:00,284 | INFO     | ***************************************
[2025-10-13 05:01:50] 2025-10-13 09:01:00,284 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:01:50] 2025-10-13 09:01:00,284 | INFO     | ***************************************
[2025-10-13 05:01:50] 2025-10-13 09:01:00,284 | INFO     | 
[2025-10-13 05:01:50] 2025-10-13 09:01:00,286 | INFO     | architecture information:
[2025-10-13 05:01:50] 2025-10-13 09:01:00,287 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:01:50] 2025-10-13 09:01:00,303 | INFO     | cat /etc/os-release:
[2025-10-13 05:01:50] NAME="CentOS Linux"
[2025-10-13 05:01:50] VERSION="7 (Core)"
[2025-10-13 05:01:50] ID="centos"
[2025-10-13 05:01:50] ID_LIKE="rhel fedora"
[2025-10-13 05:01:50] VERSION_ID="7"
[2025-10-13 05:01:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:01:50] ANSI_COLOR="0;31"
[2025-10-13 05:01:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:01:50] HOME_URL="https://www.centos.org/"
[2025-10-13 05:01:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:01:50] 
[2025-10-13 05:01:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:01:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:01:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:01:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:01:50] 
[2025-10-13 05:01:50] 2025-10-13 09:01:00,303 | INFO     | ***************************************
[2025-10-13 05:01:50] 2025-10-13 09:01:00,806 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 05:01:50] 2025-10-13 09:01:00,824 | INFO     | sufficient remaining disk space (52953088000 B)
[2025-10-13 05:01:50] 2025-10-13 09:01:00,825 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:01:50] 2025-10-13 09:01:00,825 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:01:50] 2025-10-13 09:01:00,825 | INFO     | update_server=False
[2025-10-13 05:01:50] 2025-10-13 09:01:00,825 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:01:50] 2025-10-13 09:01:00,826 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 05:01:50] 2025-10-13 09:01:00,826 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:01:50] 2025-10-13 09:01:00,826 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:01:50] 2025-10-13 09:01:00,826 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:01:50] 2025-10-13 09:01:00,826 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:01:50] 2025-10-13 09:01:01,252 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:01:50] 2025-10-13 09:01:01,330 | INFO     | all payload control threads have been joined
[2025-10-13 05:01:50] 2025-10-13 09:01:01,481 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:01:50] 2025-10-13 09:01:01,481 | INFO     | aborting loop
[2025-10-13 05:01:50] 2025-10-13 09:01:01,768 | INFO     | all data control threads have been joined
[2025-10-13 05:01:50] 2025-10-13 09:01:01,833 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:01:50] 2025-10-13 09:01:01,834 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:01:50] 2025-10-13 09:01:01,840 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:01:50] 2025-10-13 09:01:01,879 | INFO     | all job control threads have been joined
[2025-10-13 05:01:50] 2025-10-13 09:01:02,336 | INFO     | [payload] control thread has finished
[2025-10-13 05:01:50] 2025-10-13 09:01:02,364 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:01:50] 2025-10-13 09:01:02,487 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:01:50] 2025-10-13 09:01:02,563 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:01:50] 2025-10-13 09:01:02,568 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:01:50] 2025-10-13 09:01:02,617 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:01:50] 2025-10-13 09:01:02,645 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:01:50] 2025-10-13 09:01:02,774 | INFO     | [data] control thread has finished
[2025-10-13 05:01:50] 2025-10-13 09:01:02,826 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:01:50] 2025-10-13 09:01:02,885 | INFO     | [job] control thread has finished
[2025-10-13 05:01:50] 2025-10-13 09:01:02,941 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:01:50] 2025-10-13 09:01:03,273 | INFO     | [job] validate thread has finished
[2025-10-13 05:01:50] 2025-10-13 09:01:03,846 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:01:50] 2025-10-13 09:01:05,279 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:01:50] 2025-10-13 09:01:27,915 [wrapper] supervise_pilot (15 min periods counter: 10)
[2025-10-13 05:01:50] 2025-10-13 09:01:44,789 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:01:50] 2025-10-13 09:01:45,400 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140587641022272)>', '<ExcThread(monitor, started 140587156104960)>']
[2025-10-13 05:01:50] 2025-10-13 09:01:46,059 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:01:50] 2025-10-13 09:01:46,059 | INFO     | [monitor] control thread has ended
[2025-10-13 05:01:50] 2025-10-13 09:01:50,426 | INFO     | all workflow threads have been joined
[2025-10-13 05:01:50] 2025-10-13 09:01:50,426 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:01:50] 2025-10-13 09:01:50,426 | INFO     | traces error code: 0
[2025-10-13 05:01:50] 2025-10-13 09:01:50,426 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:01:50] 2025-10-13 09:01:50,575 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:01:50] 2025-10-13 09:01:50,578 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:01:50] 2025-10-13 09:01:50,581 [wrapper] pilotpid: 3356024
[2025-10-13 05:01:50] 2025-10-13 09:01:50,584 [wrapper] Pilot exit status: 0
[2025-10-13 05:01:50] 2025-10-13 09:01:50,596 [wrapper] pandaids: 6840969172
[2025-10-13 05:01:50] 2025-10-13 09:01:50,649 [wrapper] cleanup supervisor_pilot 3539652 3356025
[2025-10-13 05:01:50] 2025-10-13 09:01:50,652 [wrapper] Test setup, not cleaning
[2025-10-13 05:01:50] 2025-10-13 09:01:50,656 [wrapper] apfmon messages muted
[2025-10-13 05:01:50] 2025-10-13 09:01:50,659 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:01:50] 2025-10-13 09:01:50,662 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:01:50]  *** Error codes and diagnostics ***
[2025-10-13 05:01:50]     "exeErrorCode": 0,
[2025-10-13 05:01:50]     "exeErrorDiag": "",
[2025-10-13 05:01:50]     "pilotErrorCode": 0,
[2025-10-13 05:01:50]     "pilotErrorDiag": "",
[2025-10-13 05:01:50]  *** Listing of results directory ***
[2025-10-13 05:01:50] total 409120
[2025-10-13 05:01:50] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 19:11 pilot3.tar.gz
[2025-10-13 05:01:50] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:27 queuedata.json
[2025-10-13 05:01:50] -rwx------. 1 boincer umatlas     36292 Oct 12 19:27 runpilot2-wrapper.sh
[2025-10-13 05:01:50] -rw-r--r--. 1 boincer umatlas       100 Oct 13 02:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:01:50] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 02:46 run_atlas
[2025-10-13 05:01:50] -rw-r--r--. 1 boincer umatlas       105 Oct 13 02:46 job.xml
[2025-10-13 05:01:50] -rw-r--r--. 2 boincer umatlas 221411305 Oct 13 02:46 EVNT.46676267._004656.pool.root.1
[2025-10-13 05:01:50] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 02:46 start_atlas.sh
[2025-10-13 05:01:50] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 02:46 shared
[2025-10-13 05:01:50] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 02:46 input.tar.gz
[2025-10-13 05:01:50] -rw-r--r--. 1 boincer umatlas         0 Oct 13 02:46 boinc_lockfile
[2025-10-13 05:01:50] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 02:46 pandaJob.out
[2025-10-13 05:01:50] -rw-------. 1 boincer umatlas    972849 Oct 13 02:46 agis_schedconf.cvmfs.json
[2025-10-13 05:01:50] -rw-------. 1 boincer umatlas   1560580 Oct 13 02:46 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:01:50] drwx------. 5 boincer umatlas      4096 Oct 13 02:46 pilot3
[2025-10-13 05:01:50] -rw-r--r--. 1 boincer umatlas      6656 Oct 13 04:54 init_data.xml
[2025-10-13 05:01:50] -rw-------. 1 boincer umatlas 190598769 Oct 13 04:59 HITS.46676269._092173.pool.root.1
[2025-10-13 05:01:50] -rw-r--r--. 1 boincer umatlas       530 Oct 13 04:59 boinc_task_state.xml
[2025-10-13 05:01:50] -rw-------. 1 boincer umatlas      1038 Oct 13 05:00 memory_monitor_summary.json
[2025-10-13 05:01:50] -rw-------. 1 boincer umatlas        95 Oct 13 05:00 pilot_heartbeat.json
[2025-10-13 05:01:50] -rw-------. 1 boincer umatlas    385127 Oct 13 05:00 log.46676269._092173.job.log.tgz.1
[2025-10-13 05:01:50] -rw-------. 1 boincer umatlas      7832 Oct 13 05:00 heartbeat.json
[2025-10-13 05:01:50] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 05:01 boinc_mmap_file
[2025-10-13 05:01:50] -rw-r--r--. 1 boincer umatlas        27 Oct 13 05:01 wrapper_checkpoint.txt
[2025-10-13 05:01:50] -rw-------. 1 boincer umatlas      4552 Oct 13 05:01 pilotlog.txt
[2025-10-13 05:01:50] -rw-------. 1 boincer umatlas   1129372 Oct 13 05:01 log.46676269._092173.job.log.1
[2025-10-13 05:01:50] -rw-------. 1 boincer umatlas       357 Oct 13 05:01 output.list
[2025-10-13 05:01:50] -rw-r--r--. 1 boincer umatlas       620 Oct 13 05:01 runtime_log
[2025-10-13 05:01:50] -rw-------. 1 boincer umatlas   1536000 Oct 13 05:01 result.tar.gz
[2025-10-13 05:01:50] -rw-r--r--. 1 boincer umatlas      8698 Oct 13 05:01 runtime_log.err
[2025-10-13 05:01:50] -rw-------. 1 boincer umatlas       652 Oct 13 05:01 gosKDmweKS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmS3lNDmJas4Ao.diag
[2025-10-13 05:01:50] -rw-r--r--. 1 boincer umatlas     20924 Oct 13 05:01 stderr.txt
[2025-10-13 05:01:50] HITS file was successfully produced:
[2025-10-13 05:01:50] -rw-------. 1 boincer umatlas 190598769 Oct 13 04:59 shared/HITS.pool.root.1
[2025-10-13 05:01:50]  *** Contents of shared directory: ***
[2025-10-13 05:01:50] total 404436
[2025-10-13 05:01:50] -rw-r--r--. 2 boincer umatlas 221411305 Oct 13 02:46 ATLAS.root_0
[2025-10-13 05:01:50] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 02:46 start_atlas.sh
[2025-10-13 05:01:50] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 02:46 input.tar.gz
[2025-10-13 05:01:50] -rw-------. 1 boincer umatlas 190598769 Oct 13 04:59 HITS.pool.root.1
[2025-10-13 05:01:50] -rw-------. 1 boincer umatlas   1536000 Oct 13 05:01 result.tar.gz
05:01:51 (3352294): run_atlas exited; CPU time 50377.976455
05:01:51 (3352294): called boinc_finish(0)

</stderr_txt>
]]>

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