Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:54 (260806): wrapper (7.7.26015): starting
00:03:54 (260806): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 00:03:54] Arguments: --nthreads 9
[2025-10-13 00:03:54] Threads: 9
[2025-10-13 00:03:54] Checking for CVMFS
[2025-10-13 00:03:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:03:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:03:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:03:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:03:56] 2.13.2.0 894583 130198 307724 151602 -1585 1117 32250542 32503808 21404 16776704 0 99095390 99.725 79604177 31439 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:03:56] CVMFS is ok
[2025-10-13 00:03:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:03:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:03:56] Further information can be found at the LHC@home message board.
[2025-10-13 00:03:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:03:56] Checking for apptainer binary...
[2025-10-13 00:03:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:03:56] Running /usr/bin/apptainer --version
[2025-10-13 00:03:57] apptainer version 1.4.3-1.el9
[2025-10-13 00:03:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:03:57] c-4-35.aglt2.org
[2025-10-13 00:03:57] apptainer works
[2025-10-13 00:03:57] Set ATHENA_PROC_NUMBER=9
[2025-10-13 00:03:57] Set ATHENA_CORE_NUMBER=9
[2025-10-13 00:03:57] Starting ATLAS job with PandaID=6840962079
[2025-10-13 00:03:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:39:53]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:39:53] 2025-10-13 13:39:08,057 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 09:39:53] 2025-10-13 13:39:08,057 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 09:39:53] 2025-10-13 13:39:08,057 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 09:39:53] 2025-10-13 13:39:08,063 | INFO     | fitting pss+swap vs Time
[2025-10-13 09:39:53] 2025-10-13 13:39:08,064 | INFO     | sum of square deviations: 55627725579.20576
[2025-10-13 09:39:53] 2025-10-13 13:39:08,069 | INFO     | sum of deviations: 766869359282.0208
[2025-10-13 09:39:53] 2025-10-13 13:39:08,069 | INFO     | mean x: 1760345557.0921986
[2025-10-13 09:39:53] 2025-10-13 13:39:08,069 | INFO     | mean y: 2254485.845744681
[2025-10-13 09:39:53] 2025-10-13 13:39:08,070 | INFO     | -- intersect: -24265411600.198116
[2025-10-13 09:39:53] 2025-10-13 13:39:08,070 | INFO     | intersect: -24265411600.198116
[2025-10-13 09:39:53] 2025-10-13 13:39:08,070 | INFO     | chi2: 7.362531581802865
[2025-10-13 09:39:53] 2025-10-13 13:39:08,071 | INFO     | sum of square deviations: 54161328460.62959
[2025-10-13 09:39:53] 2025-10-13 13:39:08,077 | INFO     | sum of deviations: 780950062074.1564
[2025-10-13 09:39:53] 2025-10-13 13:39:08,078 | INFO     | mean x: 1760345404.5957067
[2025-10-13 09:39:53] 2025-10-13 13:39:08,078 | INFO     | mean y: 2255924.314847943
[2025-10-13 09:39:53] 2025-10-13 13:39:08,078 | INFO     | -- intersect: -25380095138.035603
[2025-10-13 09:39:53] 2025-10-13 13:39:08,078 | INFO     | intersect: -25380095138.035603
[2025-10-13 09:39:53] 2025-10-13 13:39:08,078 | INFO     | chi2: 6.75614657194991
[2025-10-13 09:39:53] 2025-10-13 13:39:08,078 | INFO     | current chi2=6.75614657194991 (change=8.236093836958043 %)
[2025-10-13 09:39:53] 2025-10-13 13:39:08,078 | INFO     | right removable region: 558
[2025-10-13 09:39:53] 2025-10-13 13:39:08,079 | INFO     | sum of square deviations: 54161159002.43641
[2025-10-13 09:39:53] 2025-10-13 13:39:08,085 | INFO     | sum of deviations: 615701172693.3008
[2025-10-13 09:39:53] 2025-10-13 13:39:08,085 | INFO     | mean x: 1760345709.5974956
[2025-10-13 09:39:53] 2025-10-13 13:39:08,085 | INFO     | mean y: 2270194.214669052
[2025-10-13 09:39:53] 2025-10-13 13:39:08,085 | INFO     | -- intersect: -20009246134.231007
[2025-10-13 09:39:53] 2025-10-13 13:39:08,085 | INFO     | intersect: -20009246134.231007
[2025-10-13 09:39:53] 2025-10-13 13:39:08,085 | INFO     | chi2: 4.240984087657683
[2025-10-13 09:39:53] 2025-10-13 13:39:08,085 | INFO     | current chi2=4.240984087657683 (change=42.39774674597468 %)
[2025-10-13 09:39:53] 2025-10-13 13:39:08,086 | INFO     | sum of square deviations: 52720592913.13548
[2025-10-13 09:39:53] 2025-10-13 13:39:08,092 | INFO     | sum of deviations: 513869525270.16046
[2025-10-13 09:39:53] 2025-10-13 13:39:08,092 | INFO     | mean x: 1760345862.102888
[2025-10-13 09:39:53] 2025-10-13 13:39:08,093 | INFO     | mean y: 2280965.9620938627
[2025-10-13 09:39:53] 2025-10-13 13:39:08,093 | INFO     | -- intersect: -17155873798.354334
[2025-10-13 09:39:53] 2025-10-13 13:39:08,093 | INFO     | intersect: -17155873798.354334
[2025-10-13 09:39:53] 2025-10-13 13:39:08,093 | INFO     | chi2: 2.959553710787597
[2025-10-13 09:39:53] 2025-10-13 13:39:08,093 | INFO     | current chi2=2.959553710787597 (change=30.215401670554876 %)
[2025-10-13 09:39:53] 2025-10-13 13:39:08,094 | INFO     | sum of square deviations: 51305794748.80172
[2025-10-13 09:39:53] 2025-10-13 13:39:08,101 | INFO     | sum of deviations: 436494566208.38654
[2025-10-13 09:39:53] 2025-10-13 13:39:08,101 | INFO     | mean x: 1760346014.608379
[2025-10-13 09:39:53] 2025-10-13 13:39:08,101 | INFO     | mean y: 2289306.2204007288
[2025-10-13 09:39:53] 2025-10-13 13:39:08,101 | INFO     | -- intersect: -14974215273.529676
[2025-10-13 09:39:53] 2025-10-13 13:39:08,101 | INFO     | intersect: -14974215273.529676
[2025-10-13 09:39:53] 2025-10-13 13:39:08,102 | INFO     | chi2: 2.2896695802805613
[2025-10-13 09:39:53] 2025-10-13 13:39:08,102 | INFO     | current chi2=2.2896695802805613 (change=22.63463332546737 %)
[2025-10-13 09:39:53] 2025-10-13 13:39:08,102 | INFO     | left removable region: 30
[2025-10-13 09:39:53] 2025-10-13 13:39:08,103 | INFO     | sum of square deviations: 45640091194.24322
[2025-10-13 09:39:53] 2025-10-13 13:39:08,108 | INFO     | sum of deviations: 289260571304.84863
[2025-10-13 09:39:53] 2025-10-13 13:39:08,108 | INFO     | mean x: 1760346289.121212
[2025-10-13 09:39:53] 2025-10-13 13:39:08,108 | INFO     | mean y: 2309376.7992424243
[2025-10-13 09:39:53] 2025-10-13 13:39:08,108 | INFO     | -- intersect: -11154521382.333849
[2025-10-13 09:39:53] 2025-10-13 13:39:08,108 | INFO     | intersect: -11154521382.333849
[2025-10-13 09:39:53] 2025-10-13 13:39:08,109 | INFO     | chi2: 0.6645407053832152
[2025-10-13 09:39:53] 2025-10-13 13:39:08,109 | INFO     | -- intersect: -11154521382.333849
[2025-10-13 09:39:53] 2025-10-13 13:39:08,109 | INFO     | current memory leak: 6.34 B/s (using 528 data points, chi2=0.66)
[2025-10-13 09:39:53] 2025-10-13 13:39:08,110 | INFO     | could have reported an average CPU frequency of 2603 MHz (22 samples)
[2025-10-13 09:39:53] 2025-10-13 13:39:08,110 | INFO     | ..............................
[2025-10-13 09:39:53] 2025-10-13 13:39:08,110 | INFO     | . Timing measurements:
[2025-10-13 09:39:53] 2025-10-13 13:39:08,111 | INFO     | . get job = 0 s
[2025-10-13 09:39:53] 2025-10-13 13:39:08,111 | INFO     | . initial setup = 4 s
[2025-10-13 09:39:53] 2025-10-13 13:39:08,111 | INFO     | . payload setup = 30 s
[2025-10-13 09:39:53] 2025-10-13 13:39:08,111 | INFO     | . stage-in = 0 s
[2025-10-13 09:39:53] 2025-10-13 13:39:08,111 | INFO     | . payload execution = 34375 s
[2025-10-13 09:39:53] 2025-10-13 13:39:08,111 | INFO     | . stage-out = 2 s
[2025-10-13 09:39:53] 2025-10-13 13:39:08,111 | INFO     | . log creation = 0 s
[2025-10-13 09:39:53] 2025-10-13 13:39:08,111 | INFO     | ..............................
[2025-10-13 09:39:53] 2025-10-13 13:39:08,212 | INFO     | 
[2025-10-13 09:39:53] 2025-10-13 13:39:08,212 | INFO     | job summary report
[2025-10-13 09:39:53] 2025-10-13 13:39:08,212 | INFO     | --------------------------------------------------
[2025-10-13 09:39:53] 2025-10-13 13:39:08,212 | INFO     | PanDA job id: 6840962079
[2025-10-13 09:39:53] 2025-10-13 13:39:08,212 | INFO     | task id: 46676269
[2025-10-13 09:39:53] 2025-10-13 13:39:08,212 | INFO     | errors: (none)
[2025-10-13 09:39:53] 2025-10-13 13:39:08,213 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:39:53] 2025-10-13 13:39:08,213 | INFO     | pilot state: finished 
[2025-10-13 09:39:53] 2025-10-13 13:39:08,213 | INFO     | transexitcode: 0
[2025-10-13 09:39:53] 2025-10-13 13:39:08,213 | INFO     | exeerrorcode: 0
[2025-10-13 09:39:53] 2025-10-13 13:39:08,213 | INFO     | exeerrordiag: 
[2025-10-13 09:39:53] 2025-10-13 13:39:08,213 | INFO     | exitcode: 0
[2025-10-13 09:39:53] 2025-10-13 13:39:08,213 | INFO     | exitmsg: OK
[2025-10-13 09:39:53] 2025-10-13 13:39:08,213 | INFO     | cpuconsumptiontime: 51992 s
[2025-10-13 09:39:53] 2025-10-13 13:39:08,213 | INFO     | nevents: 400
[2025-10-13 09:39:53] 2025-10-13 13:39:08,213 | INFO     | neventsw: 0
[2025-10-13 09:39:53] 2025-10-13 13:39:08,213 | INFO     | pid: 285948
[2025-10-13 09:39:53] 2025-10-13 13:39:08,213 | INFO     | pgrp: 285948
[2025-10-13 09:39:53] 2025-10-13 13:39:08,213 | INFO     | corecount: 9
[2025-10-13 09:39:53] 2025-10-13 13:39:08,213 | INFO     | event service: False
[2025-10-13 09:39:53] 2025-10-13 13:39:08,213 | INFO     | sizes: {0: 2348027, 1: 2348712, 2: 2348911, 13: 2348911, 23: 2349229, 24: 2349257, 34410: 2389949, 34413: 2399003, 34420: 2399141}
[2025-10-13 09:39:53] 2025-10-13 13:39:08,213 | INFO     | --------------------------------------------------
[2025-10-13 09:39:53] 2025-10-13 13:39:08,213 | INFO     | 
[2025-10-13 09:39:53] 2025-10-13 13:39:08,214 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 09:39:53] 2025-10-13 13:39:08,233 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:39:53] 2025-10-13 13:39:08,234 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:39:53] 2025-10-13 13:39:08,234 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:39:53] 2025-10-13 13:39:08,234 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:39:53] 2025-10-13 13:39:08,234 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:39:53] 2025-10-13 13:39:08,234 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:39:53] 2025-10-13 13:39:08,235 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:39:53] 2025-10-13 13:39:08,235 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:39:53] 2025-10-13 13:39:08,235 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:39:53] 2025-10-13 13:39:08,235 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:39:53] 2025-10-13 13:39:08,235 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:39:53] 2025-10-13 13:39:08,235 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:39:53] 2025-10-13 13:39:08,235 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:39:53] 2025-10-13 13:39:08,235 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:39:53] 2025-10-13 13:39:08,236 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:39:53] 2025-10-13 13:39:08,236 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:39:53] 2025-10-13 13:39:08,236 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:39:53] 2025-10-13 13:39:08,236 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:39:53] 2025-10-13 13:39:08,236 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:39:53] 2025-10-13 13:39:08,236 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:39:53] 2025-10-13 13:39:08,236 | INFO     | job 6840962079 has completed (purged errors)
[2025-10-13 09:39:53] 2025-10-13 13:39:08,237 | INFO     | overall cleanup function is called
[2025-10-13 09:39:53] 2025-10-13 13:39:09,245 | INFO     | --- collectZombieJob: --- 10, [285948]
[2025-10-13 09:39:53] 2025-10-13 13:39:09,246 | INFO     | zombie collector waiting for pid 285948
[2025-10-13 09:39:53] 2025-10-13 13:39:09,246 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:39:53] 2025-10-13 13:39:09,246 | INFO     | collected zombie processes
[2025-10-13 09:39:53] 2025-10-13 13:39:09,246 | INFO     | will attempt to kill all subprocesses of pid=285948
[2025-10-13 09:39:53] 2025-10-13 13:39:09,554 | INFO     | process IDs to be killed: [285948] (in reverse order)
[2025-10-13 09:39:53] 2025-10-13 13:39:09,637 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:39:53] 2025-10-13 13:39:09,638 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:39:53] 2025-10-13 13:39:09,646 | INFO     | did not find any defunct processes belonging to 285948
[2025-10-13 09:39:53] 2025-10-13 13:39:09,654 | INFO     | did not find any defunct processes belonging to 285948
[2025-10-13 09:39:53] 2025-10-13 13:39:09,654 | INFO     | ready for new job
[2025-10-13 09:39:53] 2025-10-13 13:39:09,655 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:39:53] 2025-10-13 13:39:09,657 | INFO     | ***************************************
[2025-10-13 09:39:53] 2025-10-13 13:39:09,657 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:39:53] 2025-10-13 13:39:09,657 | INFO     | ***************************************
[2025-10-13 09:39:53] 2025-10-13 13:39:09,657 | INFO     | 
[2025-10-13 09:39:53] 2025-10-13 13:39:09,659 | INFO     | architecture information:
[2025-10-13 09:39:53] 2025-10-13 13:39:09,659 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:39:53] 2025-10-13 13:39:09,671 | INFO     | cat /etc/os-release:
[2025-10-13 09:39:53] NAME="CentOS Linux"
[2025-10-13 09:39:53] VERSION="7 (Core)"
[2025-10-13 09:39:53] ID="centos"
[2025-10-13 09:39:53] ID_LIKE="rhel fedora"
[2025-10-13 09:39:53] VERSION_ID="7"
[2025-10-13 09:39:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:39:53] ANSI_COLOR="0;31"
[2025-10-13 09:39:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:39:53] HOME_URL="https://www.centos.org/"
[2025-10-13 09:39:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:39:53] 
[2025-10-13 09:39:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:39:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:39:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:39:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:39:53] 
[2025-10-13 09:39:53] 2025-10-13 13:39:09,672 | INFO     | ***************************************
[2025-10-13 09:39:53] 2025-10-13 13:39:10,175 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 09:39:53] 2025-10-13 13:39:10,191 | INFO     | sufficient remaining disk space (95776931840 B)
[2025-10-13 09:39:53] 2025-10-13 13:39:10,192 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:39:53] 2025-10-13 13:39:10,192 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:39:53] 2025-10-13 13:39:10,192 | INFO     | update_server=False
[2025-10-13 09:39:53] 2025-10-13 13:39:10,192 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:39:53] 2025-10-13 13:39:10,193 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:39:53] 2025-10-13 13:39:10,341 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:39:53] 2025-10-13 13:39:10,342 | INFO     | aborting loop
[2025-10-13 09:39:53] 2025-10-13 13:39:10,643 | INFO     | all data control threads have been joined
[2025-10-13 09:39:53] 2025-10-13 13:39:11,171 | INFO     | all job control threads have been joined
[2025-10-13 09:39:53] 2025-10-13 13:39:11,197 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:39:53] 2025-10-13 13:39:11,198 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:39:53] 2025-10-13 13:39:11,346 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:39:53] 2025-10-13 13:39:11,534 | INFO     | all payload control threads have been joined
[2025-10-13 09:39:53] 2025-10-13 13:39:11,595 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:39:53] 2025-10-13 13:39:11,646 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:39:53] 2025-10-13 13:39:11,650 | INFO     | [data] control thread has finished
[2025-10-13 09:39:53] 2025-10-13 13:39:11,692 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:39:53] 2025-10-13 13:39:11,931 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:39:53] 2025-10-13 13:39:12,176 | INFO     | [job] control thread has finished
[2025-10-13 09:39:53] 2025-10-13 13:39:12,297 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:39:53] 2025-10-13 13:39:12,305 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:39:53] 2025-10-13 13:39:12,409 | INFO     | [job] validate thread has finished
[2025-10-13 09:39:53] 2025-10-13 13:39:12,424 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:39:53] 2025-10-13 13:39:12,465 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:39:53] 2025-10-13 13:39:12,539 | INFO     | [payload] control thread has finished
[2025-10-13 09:39:53] 2025-10-13 13:39:12,612 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:39:53] 2025-10-13 13:39:13,601 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:39:53] 2025-10-13 13:39:15,698 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:39:53] 2025-10-13 13:39:39,732 | INFO     | PID=268167 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 09:39:53] 2025-10-13 13:39:39,732 | INFO     | .. there are 16 such processes running
[2025-10-13 09:39:53] 2025-10-13 13:39:39,732 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:39:53] 2025-10-13 13:39:39,732 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:39:53] 2025-10-13 13:39:39,732 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:39:53] 2025-10-13 13:39:47,796 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:39:53] 2025-10-13 13:39:48,539 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140466140362560)>', '<ExcThread(monitor, started 140465328338688)>']
[2025-10-13 09:39:53] 2025-10-13 13:39:48,777 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:39:53] 2025-10-13 13:39:48,777 | INFO     | [monitor] control thread has ended
[2025-10-13 09:39:53] 2025-10-13 13:39:53,566 | INFO     | all workflow threads have been joined
[2025-10-13 09:39:53] 2025-10-13 13:39:53,566 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:39:53] 2025-10-13 13:39:53,567 | INFO     | traces error code: 0
[2025-10-13 09:39:53] 2025-10-13 13:39:53,567 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:39:53] 2025-10-13 13:39:53,741 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:39:53] 2025-10-13 13:39:53,743 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:39:53] 2025-10-13 13:39:53,749 [wrapper] pilotpid: 268167
[2025-10-13 09:39:53] 2025-10-13 13:39:53,751 [wrapper] Pilot exit status: 0
[2025-10-13 09:39:53] 2025-10-13 13:39:53,760 [wrapper] pandaids: 6840962079
[2025-10-13 09:39:53] 2025-10-13 13:39:53,817 [wrapper] cleanup supervisor_pilot 1693903 268168
[2025-10-13 09:39:53] 2025-10-13 13:39:53,820 [wrapper] Test setup, not cleaning
[2025-10-13 09:39:53] 2025-10-13 13:39:53,823 [wrapper] apfmon messages muted
[2025-10-13 09:39:53] 2025-10-13 13:39:53,826 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:39:53] 2025-10-13 13:39:53,828 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:39:53]  *** Error codes and diagnostics ***
[2025-10-13 09:39:53]     "exeErrorCode": 0,
[2025-10-13 09:39:53]     "exeErrorDiag": "",
[2025-10-13 09:39:53]     "pilotErrorCode": 0,
[2025-10-13 09:39:53]     "pilotErrorDiag": "",
[2025-10-13 09:39:53]  *** Listing of results directory ***
[2025-10-13 09:39:53] total 418200
[2025-10-13 09:39:53] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 19:11 pilot3.tar.gz
[2025-10-13 09:39:53] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:17 queuedata.json
[2025-10-13 09:39:53] -rwx------. 1 boincer umatlas     36292 Oct 12 19:19 runpilot2-wrapper.sh
[2025-10-13 09:39:53] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:39:53] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:03 run_atlas
[2025-10-13 09:39:53] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:03 job.xml
[2025-10-13 09:39:53] -rw-r--r--. 2 boincer umatlas 223472298 Oct 13 00:03 EVNT.46676267._004652.pool.root.1
[2025-10-13 09:39:53] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:03 start_atlas.sh
[2025-10-13 09:39:53] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:03 shared
[2025-10-13 09:39:53] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 00:03 input.tar.gz
[2025-10-13 09:39:53] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:03 boinc_lockfile
[2025-10-13 09:39:53] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 00:03 pandaJob.out
[2025-10-13 09:39:53] -rw-------. 1 boincer umatlas    975496 Oct 13 00:04 agis_schedconf.cvmfs.json
[2025-10-13 09:39:53] drwx------. 5 boincer umatlas      4096 Oct 13 00:04 pilot3
[2025-10-13 09:39:53] -rw-r--r--. 1 boincer umatlas      6658 Oct 13 09:36 init_data.xml
[2025-10-13 09:39:53] -rw-------. 1 boincer umatlas 190137058 Oct 13 09:38 HITS.46676269._092050.pool.root.1
[2025-10-13 09:39:53] -rw-r--r--. 1 boincer umatlas       530 Oct 13 09:38 boinc_task_state.xml
[2025-10-13 09:39:53] -rw-------. 1 boincer umatlas      1042 Oct 13 09:38 memory_monitor_summary.json
[2025-10-13 09:39:53] -rw-------. 1 boincer umatlas        95 Oct 13 09:38 pilot_heartbeat.json
[2025-10-13 09:39:53] -rw-------. 1 boincer umatlas   1560580 Oct 13 09:39 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:39:53] -rw-------. 1 boincer umatlas    755441 Oct 13 09:39 log.46676269._092050.job.log.tgz.1
[2025-10-13 09:39:53] -rw-------. 1 boincer umatlas      7820 Oct 13 09:39 heartbeat.json
[2025-10-13 09:39:53] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 09:39 boinc_mmap_file
[2025-10-13 09:39:53] -rw-r--r--. 1 boincer umatlas        27 Oct 13 09:39 wrapper_checkpoint.txt
[2025-10-13 09:39:53] -rw-------. 1 boincer umatlas      4823 Oct 13 09:39 pilotlog.txt
[2025-10-13 09:39:53] -rw-------. 1 boincer umatlas   4604465 Oct 13 09:39 log.46676269._092050.job.log.1
[2025-10-13 09:39:53] -rw-------. 1 boincer umatlas       357 Oct 13 09:39 output.list
[2025-10-13 09:39:53] -rw-r--r--. 1 boincer umatlas       620 Oct 13 09:39 runtime_log
[2025-10-13 09:39:53] -rw-------. 1 boincer umatlas   5376000 Oct 13 09:39 result.tar.gz
[2025-10-13 09:39:53] -rw-------. 1 boincer umatlas       656 Oct 13 09:39 ZZFLDm7WKS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmn1lNDmCfhcYm.diag
[2025-10-13 09:39:53] -rw-r--r--. 1 boincer umatlas      8694 Oct 13 09:39 runtime_log.err
[2025-10-13 09:39:53] -rw-r--r--. 1 boincer umatlas     20986 Oct 13 09:39 stderr.txt
[2025-10-13 09:39:53] HITS file was successfully produced:
[2025-10-13 09:39:53] -rw-------. 1 boincer umatlas 190137058 Oct 13 09:38 shared/HITS.pool.root.1
[2025-10-13 09:39:53]  *** Contents of shared directory: ***
[2025-10-13 09:39:53] total 409756
[2025-10-13 09:39:53] -rw-r--r--. 2 boincer umatlas 223472298 Oct 13 00:03 ATLAS.root_0
[2025-10-13 09:39:53] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:03 start_atlas.sh
[2025-10-13 09:39:53] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 00:03 input.tar.gz
[2025-10-13 09:39:53] -rw-------. 1 boincer umatlas 190137058 Oct 13 09:38 HITS.pool.root.1
[2025-10-13 09:39:53] -rw-------. 1 boincer umatlas   5376000 Oct 13 09:39 result.tar.gz
09:39:55 (260806): run_atlas exited; CPU time 53284.754495
09:39:55 (260806): called boinc_finish(0)

</stderr_txt>
]]>

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