Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:14 (2040284): wrapper (7.7.26015): starting
00:03:14 (2040284): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:03:14] Arguments: --nthreads 12
[2025-10-13 00:03:14] Threads: 12
[2025-10-13 00:03:14] Checking for CVMFS
[2025-10-13 00:03:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:03:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:03:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:03:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:03:15] 2.13.2.0 654572 130195 519964 151647 0 843 24620138 32935937 39282 16776704 0 456551138 99.684 373334186 16895 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:03:15] CVMFS is ok
[2025-10-13 00:03:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:03:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:03:15] Further information can be found at the LHC@home message board.
[2025-10-13 00:03:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:03:15] Checking for apptainer binary...
[2025-10-13 00:03:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:03:15] Running /usr/bin/apptainer --version
[2025-10-13 00:03:15] apptainer version 1.4.3-1.el9
[2025-10-13 00:03:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:03:16] c7-3-28.aglt2.org
[2025-10-13 00:03:16] apptainer works
[2025-10-13 00:03:16] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:03:16] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:03:16] Starting ATLAS job with PandaID=6840969228
[2025-10-13 00:03:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:21:16]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:21:16] 2025-10-13 07:20:13,139 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 03:21:16] 2025-10-13 07:20:13,139 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 03:21:16] 2025-10-13 07:20:13,139 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:21:16] 2025-10-13 07:20:13,142 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:21:16] 2025-10-13 07:20:13,143 | INFO     | sum of square deviations: 2194666967.9948006
[2025-10-13 03:21:16] 2025-10-13 07:20:13,144 | INFO     | sum of deviations: 70587040730.24483
[2025-10-13 03:21:16] 2025-10-13 07:20:13,144 | INFO     | mean x: 1760334121.5052083
[2025-10-13 03:21:16] 2025-10-13 07:20:13,144 | INFO     | mean y: 2219050.2552083335
[2025-10-13 03:21:16] 2025-10-13 07:20:13,144 | INFO     | -- intersect: -56615380861.52433
[2025-10-13 03:21:16] 2025-10-13 07:20:13,144 | INFO     | intersect: -56615380861.52433
[2025-10-13 03:21:16] 2025-10-13 07:20:13,144 | INFO     | chi2: 4.57414517689567
[2025-10-13 03:21:16] 2025-10-13 07:20:13,145 | INFO     | sum of square deviations: 2027631582.994655
[2025-10-13 03:21:16] 2025-10-13 07:20:13,146 | INFO     | sum of deviations: 90754430917.77
[2025-10-13 03:21:16] 2025-10-13 07:20:13,146 | INFO     | mean x: 1760333969.0053475
[2025-10-13 03:21:16] 2025-10-13 07:20:13,146 | INFO     | mean y: 2237143.229946524
[2025-10-13 03:21:16] 2025-10-13 07:20:13,146 | INFO     | -- intersect: -78788263518.8032
[2025-10-13 03:21:16] 2025-10-13 07:20:13,146 | INFO     | intersect: -78788263518.8032
[2025-10-13 03:21:16] 2025-10-13 07:20:13,146 | INFO     | chi2: 3.1786564038637226
[2025-10-13 03:21:16] 2025-10-13 07:20:13,147 | INFO     | current chi2=3.1786564038637226 (change=30.508187192672846 %)
[2025-10-13 03:21:16] 2025-10-13 07:20:13,147 | INFO     | sum of square deviations: 1869294035.4945054
[2025-10-13 03:21:16] 2025-10-13 07:20:13,148 | INFO     | sum of deviations: 88113905522.58244
[2025-10-13 03:21:16] 2025-10-13 07:20:13,148 | INFO     | mean x: 1760333816.5054946
[2025-10-13 03:21:16] 2025-10-13 07:20:13,148 | INFO     | mean y: 2234615.4175824174
[2025-10-13 03:21:16] 2025-10-13 07:20:13,148 | INFO     | -- intersect: -82975555208.1824
[2025-10-13 03:21:16] 2025-10-13 07:20:13,148 | INFO     | intersect: -82975555208.1824
[2025-10-13 03:21:16] 2025-10-13 07:20:13,148 | INFO     | chi2: 3.1674934522204725
[2025-10-13 03:21:16] 2025-10-13 07:20:13,149 | INFO     | current chi2=3.1674934522204725 (change=0.351184595783341 %)
[2025-10-13 03:21:16] 2025-10-13 07:20:13,149 | INFO     | right removable region: 181
[2025-10-13 03:21:16] 2025-10-13 07:20:13,149 | INFO     | sum of square deviations: 2027630972.994655
[2025-10-13 03:21:16] 2025-10-13 07:20:13,150 | INFO     | sum of deviations: 27745482255.016037
[2025-10-13 03:21:16] 2025-10-13 07:20:13,150 | INFO     | mean x: 1760334274.0053475
[2025-10-13 03:21:16] 2025-10-13 07:20:13,150 | INFO     | mean y: 2257982.9839572194
[2025-10-13 03:21:16] 2025-10-13 07:20:13,150 | INFO     | -- intersect: -24085617973.15072
[2025-10-13 03:21:16] 2025-10-13 07:20:13,150 | INFO     | intersect: -24085617973.15072
[2025-10-13 03:21:16] 2025-10-13 07:20:13,151 | INFO     | chi2: 2.153603288278264
[2025-10-13 03:21:16] 2025-10-13 07:20:13,151 | INFO     | current chi2=2.153603288278264 (change=52.91790695327586 %)
[2025-10-13 03:21:16] 2025-10-13 07:20:13,151 | INFO     | sum of square deviations: 1869292815.4945054
[2025-10-13 03:21:16] 2025-10-13 07:20:13,152 | INFO     | sum of deviations: 8480324795.593401
[2025-10-13 03:21:16] 2025-10-13 07:20:13,152 | INFO     | mean x: 1760334426.5054946
[2025-10-13 03:21:16] 2025-10-13 07:20:13,152 | INFO     | mean y: 2276492.4065934066
[2025-10-13 03:21:16] 2025-10-13 07:20:13,152 | INFO     | -- intersect: -7983742370.926011
[2025-10-13 03:21:16] 2025-10-13 07:20:13,152 | INFO     | intersect: -7983742370.926011
[2025-10-13 03:21:16] 2025-10-13 07:20:13,153 | INFO     | chi2: 1.7392417978911516
[2025-10-13 03:21:16] 2025-10-13 07:20:13,153 | INFO     | current chi2=1.7392417978911516 (change=19.240381580136834 %)
[2025-10-13 03:21:16] 2025-10-13 07:20:13,153 | INFO     | left removable region: 20
[2025-10-13 03:21:16] 2025-10-13 07:20:13,153 | INFO     | sum of square deviations: 1294005810.9937937
[2025-10-13 03:21:16] 2025-10-13 07:20:13,154 | INFO     | sum of deviations: 10846802044.428576
[2025-10-13 03:21:16] 2025-10-13 07:20:13,154 | INFO     | mean x: 1760334396.0062113
[2025-10-13 03:21:16] 2025-10-13 07:20:13,154 | INFO     | mean y: 2315715.5714285714
[2025-10-13 03:21:16] 2025-10-13 07:20:13,154 | INFO     | -- intersect: -14753413017.063833
[2025-10-13 03:21:16] 2025-10-13 07:20:13,154 | INFO     | intersect: -14753413017.063833
[2025-10-13 03:21:16] 2025-10-13 07:20:13,155 | INFO     | chi2: 0.04176841444605181
[2025-10-13 03:21:16] 2025-10-13 07:20:13,155 | INFO     | -- intersect: -14753413017.063833
[2025-10-13 03:21:16] 2025-10-13 07:20:13,155 | INFO     | current memory leak: 8.38 B/s (using 161 data points, chi2=0.04)
[2025-10-13 03:21:16] 2025-10-13 07:20:13,155 | INFO     | could have reported an average CPU frequency of 3153 MHz (10 samples)
[2025-10-13 03:21:16] 2025-10-13 07:20:13,155 | INFO     | ..............................
[2025-10-13 03:21:16] 2025-10-13 07:20:13,156 | INFO     | . Timing measurements:
[2025-10-13 03:21:16] 2025-10-13 07:20:13,156 | INFO     | . get job = 0 s
[2025-10-13 03:21:16] 2025-10-13 07:20:13,156 | INFO     | . initial setup = 4 s
[2025-10-13 03:21:16] 2025-10-13 07:20:13,156 | INFO     | . payload setup = 16 s
[2025-10-13 03:21:16] 2025-10-13 07:20:13,156 | INFO     | . stage-in = 0 s
[2025-10-13 03:21:16] 2025-10-13 07:20:13,156 | INFO     | . payload execution = 11704 s
[2025-10-13 03:21:16] 2025-10-13 07:20:13,156 | INFO     | . stage-out = 2 s
[2025-10-13 03:21:16] 2025-10-13 07:20:13,156 | INFO     | . log creation = 0 s
[2025-10-13 03:21:16] 2025-10-13 07:20:13,156 | INFO     | ..............................
[2025-10-13 03:21:16] 2025-10-13 07:20:13,318 | INFO     | 
[2025-10-13 03:21:16] 2025-10-13 07:20:13,318 | INFO     | job summary report
[2025-10-13 03:21:16] 2025-10-13 07:20:13,318 | INFO     | --------------------------------------------------
[2025-10-13 03:21:16] 2025-10-13 07:20:13,318 | INFO     | PanDA job id: 6840969228
[2025-10-13 03:21:16] 2025-10-13 07:20:13,318 | INFO     | task id: 46676269
[2025-10-13 03:21:16] 2025-10-13 07:20:13,318 | INFO     | errors: (none)
[2025-10-13 03:21:16] 2025-10-13 07:20:13,318 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:21:16] 2025-10-13 07:20:13,318 | INFO     | pilot state: finished 
[2025-10-13 03:21:16] 2025-10-13 07:20:13,318 | INFO     | transexitcode: 0
[2025-10-13 03:21:16] 2025-10-13 07:20:13,319 | INFO     | exeerrorcode: 0
[2025-10-13 03:21:16] 2025-10-13 07:20:13,319 | INFO     | exeerrordiag: 
[2025-10-13 03:21:16] 2025-10-13 07:20:13,319 | INFO     | exitcode: 0
[2025-10-13 03:21:16] 2025-10-13 07:20:13,319 | INFO     | exitmsg: OK
[2025-10-13 03:21:16] 2025-10-13 07:20:13,319 | INFO     | cpuconsumptiontime: 31366 s
[2025-10-13 03:21:16] 2025-10-13 07:20:13,319 | INFO     | nevents: 400
[2025-10-13 03:21:16] 2025-10-13 07:20:13,319 | INFO     | neventsw: 0
[2025-10-13 03:21:16] 2025-10-13 07:20:13,319 | INFO     | pid: 2068786
[2025-10-13 03:21:16] 2025-10-13 07:20:13,319 | INFO     | pgrp: 2068786
[2025-10-13 03:21:16] 2025-10-13 07:20:13,319 | INFO     | corecount: 12
[2025-10-13 03:21:16] 2025-10-13 07:20:13,319 | INFO     | event service: False
[2025-10-13 03:21:16] 2025-10-13 07:20:13,319 | INFO     | sizes: {0: 2348857, 11: 2348857, 15: 2349147, 22: 2349175, 11725: 2378888, 11728: 2388070, 11745: 2388208}
[2025-10-13 03:21:16] 2025-10-13 07:20:13,319 | INFO     | --------------------------------------------------
[2025-10-13 03:21:16] 2025-10-13 07:20:13,319 | INFO     | 
[2025-10-13 03:21:16] 2025-10-13 07:20:13,319 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-13 03:21:16] 2025-10-13 07:20:13,358 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:21:16] 2025-10-13 07:20:13,359 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:21:16] 2025-10-13 07:20:13,359 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:21:16] 2025-10-13 07:20:13,359 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:21:16] 2025-10-13 07:20:13,359 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:21:16] 2025-10-13 07:20:13,359 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:21:16] 2025-10-13 07:20:13,359 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:21:16] 2025-10-13 07:20:13,359 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:21:16] 2025-10-13 07:20:13,359 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:21:16] 2025-10-13 07:20:13,359 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:21:16] 2025-10-13 07:20:13,359 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:21:16] 2025-10-13 07:20:13,359 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:21:16] 2025-10-13 07:20:13,360 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:21:16] 2025-10-13 07:20:13,360 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:21:16] 2025-10-13 07:20:13,360 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:21:16] 2025-10-13 07:20:13,360 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:21:16] 2025-10-13 07:20:13,360 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:21:16] 2025-10-13 07:20:13,360 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:21:16] 2025-10-13 07:20:13,360 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:21:16] 2025-10-13 07:20:13,360 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:21:16] 2025-10-13 07:20:13,360 | INFO     | job 6840969228 has completed (purged errors)
[2025-10-13 03:21:16] 2025-10-13 07:20:13,360 | INFO     | overall cleanup function is called
[2025-10-13 03:21:16] 2025-10-13 07:20:14,369 | INFO     | --- collectZombieJob: --- 10, [2068786]
[2025-10-13 03:21:16] 2025-10-13 07:20:14,370 | INFO     | zombie collector waiting for pid 2068786
[2025-10-13 03:21:16] 2025-10-13 07:20:14,370 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:21:16] 2025-10-13 07:20:14,370 | INFO     | collected zombie processes
[2025-10-13 03:21:16] 2025-10-13 07:20:14,370 | INFO     | will attempt to kill all subprocesses of pid=2068786
[2025-10-13 03:21:16] 2025-10-13 07:20:15,258 | INFO     | process IDs to be killed: [2068786] (in reverse order)
[2025-10-13 03:21:16] 2025-10-13 07:20:15,708 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:21:16] 2025-10-13 07:20:15,708 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:21:16] 2025-10-13 07:20:15,732 | INFO     | did not find any defunct processes belonging to 2068786
[2025-10-13 03:21:16] 2025-10-13 07:20:15,755 | INFO     | did not find any defunct processes belonging to 2068786
[2025-10-13 03:21:16] 2025-10-13 07:20:15,756 | INFO     | ready for new job
[2025-10-13 03:21:16] 2025-10-13 07:20:15,756 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:21:16] 2025-10-13 07:20:15,758 | INFO     | ***************************************
[2025-10-13 03:21:16] 2025-10-13 07:20:15,758 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:21:16] 2025-10-13 07:20:15,758 | INFO     | ***************************************
[2025-10-13 03:21:16] 2025-10-13 07:20:15,758 | INFO     | 
[2025-10-13 03:21:16] 2025-10-13 07:20:15,764 | INFO     | architecture information:
[2025-10-13 03:21:16] 2025-10-13 07:20:15,764 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:21:16] 2025-10-13 07:20:15,813 | INFO     | cat /etc/os-release:
[2025-10-13 03:21:16] NAME="CentOS Linux"
[2025-10-13 03:21:16] VERSION="7 (Core)"
[2025-10-13 03:21:16] ID="centos"
[2025-10-13 03:21:16] ID_LIKE="rhel fedora"
[2025-10-13 03:21:16] VERSION_ID="7"
[2025-10-13 03:21:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:21:16] ANSI_COLOR="0;31"
[2025-10-13 03:21:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:21:16] HOME_URL="https://www.centos.org/"
[2025-10-13 03:21:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:21:16] 
[2025-10-13 03:21:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:21:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:21:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:21:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:21:16] 
[2025-10-13 03:21:16] 2025-10-13 07:20:15,813 | INFO     | ***************************************
[2025-10-13 03:21:16] 2025-10-13 07:20:16,317 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-13 03:21:16] 2025-10-13 07:20:16,342 | INFO     | sufficient remaining disk space (74221355008 B)
[2025-10-13 03:21:16] 2025-10-13 07:20:16,342 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:21:16] 2025-10-13 07:20:16,342 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:21:16] 2025-10-13 07:20:16,342 | INFO     | update_server=False
[2025-10-13 03:21:16] 2025-10-13 07:20:16,342 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:21:16] 2025-10-13 07:20:16,350 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:21:16] 2025-10-13 07:20:16,489 | INFO     | all data control threads have been joined
[2025-10-13 03:21:16] 2025-10-13 07:20:16,613 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:21:16] 2025-10-13 07:20:16,646 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:21:16] 2025-10-13 07:20:16,646 | INFO     | aborting loop
[2025-10-13 03:21:16] 2025-10-13 07:20:17,136 | INFO     | all job control threads have been joined
[2025-10-13 03:21:16] 2025-10-13 07:20:17,349 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:21:16] 2025-10-13 07:20:17,349 | INFO     | all payload control threads have been joined
[2025-10-13 03:21:16] 2025-10-13 07:20:17,456 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:21:16] 2025-10-13 07:20:17,456 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:21:16] 2025-10-13 07:20:17,518 | INFO     | [data] control thread has finished
[2025-10-13 03:21:16] 2025-10-13 07:20:17,652 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:21:16] 2025-10-13 07:20:18,041 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:21:16] 2025-10-13 07:20:18,142 | INFO     | [job] control thread has finished
[2025-10-13 03:21:16] 2025-10-13 07:20:18,166 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:21:16] 2025-10-13 07:20:18,214 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:21:16] 2025-10-13 07:20:18,288 | INFO     | [job] validate thread has finished
[2025-10-13 03:21:16] 2025-10-13 07:20:18,349 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:21:16] 2025-10-13 07:20:18,356 | INFO     | [payload] control thread has finished
[2025-10-13 03:21:16] 2025-10-13 07:20:18,475 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:21:16] 2025-10-13 07:20:18,620 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:21:16] 2025-10-13 07:20:18,828 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:21:16] 2025-10-13 07:20:19,355 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:21:16] 2025-10-13 07:20:20,362 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:21:16] 2025-10-13 07:20:45,881 | INFO     | PID=2046998 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 03:21:16] 2025-10-13 07:20:45,882 | INFO     | .. there are 54 such processes running
[2025-10-13 03:21:16] 2025-10-13 07:20:45,882 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:21:16] 2025-10-13 07:20:45,882 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:21:16] 2025-10-13 07:20:45,883 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:21:16] 2025-10-13 07:21:10,723 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:21:16] 2025-10-13 07:21:10,946 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139717571254080)>', '<ExcThread(monitor, started 139717064505088)>']
[2025-10-13 03:21:16] 2025-10-13 07:21:11,070 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:21:16] 2025-10-13 07:21:11,071 | INFO     | [monitor] control thread has ended
[2025-10-13 03:21:16] 2025-10-13 07:21:15,972 | INFO     | all workflow threads have been joined
[2025-10-13 03:21:16] 2025-10-13 07:21:15,972 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:21:16] 2025-10-13 07:21:15,972 | INFO     | traces error code: 0
[2025-10-13 03:21:16] 2025-10-13 07:21:15,972 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:21:16] 2025-10-13 07:21:16,368 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:21:16] 2025-10-13 07:21:16,408 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:21:16] 2025-10-13 07:21:16,444 [wrapper] pilotpid: 2046998
[2025-10-13 03:21:16] 2025-10-13 07:21:16,452 [wrapper] Pilot exit status: 0
[2025-10-13 03:21:16] 2025-10-13 07:21:16,511 [wrapper] pandaids: 6840969228
[2025-10-13 03:21:16] 2025-10-13 07:21:16,687 [wrapper] cleanup supervisor_pilot 3176646 2046999
[2025-10-13 03:21:16] 2025-10-13 07:21:16,690 [wrapper] Test setup, not cleaning
[2025-10-13 03:21:16] 2025-10-13 07:21:16,692 [wrapper] apfmon messages muted
[2025-10-13 03:21:16] 2025-10-13 07:21:16,695 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:21:16] 2025-10-13 07:21:16,699 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:21:16]  *** Error codes and diagnostics ***
[2025-10-13 03:21:16]     "exeErrorCode": 0,
[2025-10-13 03:21:16]     "exeErrorDiag": "",
[2025-10-13 03:21:16]     "pilotErrorCode": 0,
[2025-10-13 03:21:16]     "pilotErrorDiag": "",
[2025-10-13 03:21:16]  *** Listing of results directory ***
[2025-10-13 03:21:16] total 412396
[2025-10-13 03:21:16] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 19:11 pilot3.tar.gz
[2025-10-13 03:21:16] -rwx------. 1 boincer umatlas     36292 Oct 12 19:30 runpilot2-wrapper.sh
[2025-10-13 03:21:16] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:30 queuedata.json
[2025-10-13 03:21:16] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:21:16] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:03 run_atlas
[2025-10-13 03:21:16] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:03 job.xml
[2025-10-13 03:21:16] -rw-r--r--. 2 boincer umatlas 222703809 Oct 13 00:03 EVNT.46676267._004658.pool.root.1
[2025-10-13 03:21:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:03 start_atlas.sh
[2025-10-13 03:21:16] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:03 shared
[2025-10-13 03:21:16] -rw-r--r--. 2 boincer umatlas    569675 Oct 13 00:03 input.tar.gz
[2025-10-13 03:21:16] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:03 boinc_lockfile
[2025-10-13 03:21:16] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:03 pandaJob.out
[2025-10-13 03:21:16] -rw-------. 1 boincer umatlas    974373 Oct 13 00:03 agis_schedconf.cvmfs.json
[2025-10-13 03:21:16] drwx------. 5 boincer umatlas      4096 Oct 13 00:03 pilot3
[2025-10-13 03:21:16] -rw-------. 1 boincer umatlas 191586325 Oct 13 03:17 HITS.46676269._092229.pool.root.1
[2025-10-13 03:21:16] -rw-r--r--. 1 boincer umatlas       530 Oct 13 03:17 boinc_task_state.xml
[2025-10-13 03:21:16] -rw-r--r--. 1 boincer umatlas      6936 Oct 13 03:19 init_data.xml
[2025-10-13 03:21:16] -rw-------. 1 boincer umatlas      1045 Oct 13 03:19 memory_monitor_summary.json
[2025-10-13 03:21:16] -rw-------. 1 boincer umatlas   1560580 Oct 13 03:19 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:21:16] -rw-------. 1 boincer umatlas    486137 Oct 13 03:19 log.46676269._092229.job.log.tgz.1
[2025-10-13 03:21:16] -rw-------. 1 boincer umatlas      7802 Oct 13 03:20 heartbeat.json
[2025-10-13 03:21:16] -rw-------. 1 boincer umatlas        95 Oct 13 03:20 pilot_heartbeat.json
[2025-10-13 03:21:16] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 03:21 boinc_mmap_file
[2025-10-13 03:21:16] -rw-r--r--. 1 boincer umatlas        28 Oct 13 03:21 wrapper_checkpoint.txt
[2025-10-13 03:21:16] -rw-------. 1 boincer umatlas      4824 Oct 13 03:21 pilotlog.txt
[2025-10-13 03:21:16] -rw-------. 1 boincer umatlas   1561692 Oct 13 03:21 log.46676269._092229.job.log.1
[2025-10-13 03:21:16] -rw-------. 1 boincer umatlas       357 Oct 13 03:21 output.list
[2025-10-13 03:21:16] -rw-r--r--. 1 boincer umatlas       620 Oct 13 03:21 runtime_log
[2025-10-13 03:21:16] -rw-------. 1 boincer umatlas   2068480 Oct 13 03:21 result.tar.gz
[2025-10-13 03:21:16] -rw-r--r--. 1 boincer umatlas      8701 Oct 13 03:21 runtime_log.err
[2025-10-13 03:21:16] -rw-------. 1 boincer umatlas       658 Oct 13 03:21 9agNDmrhKS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmUHVMDmsFNGVn.diag
[2025-10-13 03:21:16] -rw-r--r--. 1 boincer umatlas     20976 Oct 13 03:21 stderr.txt
[2025-10-13 03:21:16] HITS file was successfully produced:
[2025-10-13 03:21:16] -rw-------. 1 boincer umatlas 191586325 Oct 13 03:17 shared/HITS.pool.root.1
[2025-10-13 03:21:16]  *** Contents of shared directory: ***
[2025-10-13 03:21:16] total 407192
[2025-10-13 03:21:16] -rw-r--r--. 2 boincer umatlas 222703809 Oct 13 00:03 ATLAS.root_0
[2025-10-13 03:21:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:03 start_atlas.sh
[2025-10-13 03:21:16] -rw-r--r--. 2 boincer umatlas    569675 Oct 13 00:03 input.tar.gz
[2025-10-13 03:21:16] -rw-------. 1 boincer umatlas 191586325 Oct 13 03:17 HITS.pool.root.1
[2025-10-13 03:21:16] -rw-------. 1 boincer umatlas   2068480 Oct 13 03:21 result.tar.gz
03:21:18 (2040284): run_atlas exited; CPU time 31932.463494
03:21:18 (2040284): called boinc_finish(0)

</stderr_txt>
]]>

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