Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:19:03 (2882428): wrapper (7.7.26015): starting
00:19:03 (2882428): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 00:19:03] Arguments: --nthreads 9
[2025-10-13 00:19:03] Threads: 9
[2025-10-13 00:19:03] Checking for CVMFS
[2025-10-13 00:19:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:19:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:19:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:19:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:19:06] 2.13.2.0 136315 23711 233932 151649 0 21 30045604 40960000 24669 16776704 0 60606385 99.705 51654448 32007 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:19:06] CVMFS is ok
[2025-10-13 00:19:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:19:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:19:06] Further information can be found at the LHC@home message board.
[2025-10-13 00:19:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:19:06] Checking for apptainer binary...
[2025-10-13 00:19:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:19:06] Running /usr/bin/apptainer --version
[2025-10-13 00:19:06] apptainer version 1.4.3-1.el9
[2025-10-13 00:19:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:19:08] c6-8-12-2.aglt2.org
[2025-10-13 00:19:08] apptainer works
[2025-10-13 00:19:08] Set ATHENA_PROC_NUMBER=9
[2025-10-13 00:19:08] Set ATHENA_CORE_NUMBER=9
[2025-10-13 00:19:08] Starting ATLAS job with PandaID=6837962171
[2025-10-13 00:19:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:28:48]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:28:48] 2025-10-13 10:30:42,158 | INFO     | chi2: 0.2099548762621694
[2025-10-13 07:28:48] 2025-10-13 10:30:42,158 | INFO     | -- intersect: 22258275.70779209
[2025-10-13 07:28:48] 2025-10-13 10:30:42,158 | INFO     | current memory leak: -0.01 B/s (using 322 data points, chi2=0.21)
[2025-10-13 07:28:48] 2025-10-13 10:30:42,159 | INFO     | could have reported an average CPU frequency of 2767 MHz (15 samples)
[2025-10-13 07:28:48] 2025-10-13 10:30:42,159 | INFO     | ..............................
[2025-10-13 07:28:48] 2025-10-13 10:30:42,159 | INFO     | . Timing measurements:
[2025-10-13 07:28:48] 2025-10-13 10:30:42,159 | INFO     | . get job = 0 s
[2025-10-13 07:28:48] 2025-10-13 10:30:42,159 | INFO     | . initial setup = 8 s
[2025-10-13 07:28:48] 2025-10-13 10:30:42,159 | INFO     | . payload setup = 65 s
[2025-10-13 07:28:48] 2025-10-13 10:30:42,159 | INFO     | . stage-in = 0 s
[2025-10-13 07:28:48] 2025-10-13 10:30:42,159 | INFO     | . payload execution = 21828 s
[2025-10-13 07:28:48] 2025-10-13 10:30:42,239 | INFO     | . stage-out = 14 s
[2025-10-13 07:28:48] 2025-10-13 10:30:42,239 | INFO     | . log creation = 3 s
[2025-10-13 07:28:48] 2025-10-13 10:30:42,239 | INFO     | ..............................
[2025-10-13 07:28:48] 2025-10-13 10:30:42,239 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-13 07:28:48] 2025-10-13 10:30:42,240 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/4/PanDA_Pilot-6837962171/pilotlog.txt
[2025-10-13 07:28:48] 2025-10-13 10:30:42,591 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-13 07:28:48] - Log from pilotlog.txt -
[2025-10-13 07:28:48] 2025-10-13 10:30:42,157 | INFO     | mean x: 1760341086.5248446
[2025-10-13 07:28:48] 2025-10-13 10:30:42,157 | INFO     | mean y: 2562406.7236024844
[2025-10-13 07:28:48] 2025-10-13 10:30:42,157 | INFO     | -- intersect: 22258275.70779209
[2025-10-13 07:28:48] 2025-10-13 10:30:42,157 | INFO     | intersect: 22258275.70779209
[2025-10-13 07:28:48] 2025-10-13 10:30:42,158 | INFO     | chi2: 0.2099548762621694
[2025-10-13 07:28:48] 2025-10-13 10:30:42,158 | INFO     | -- intersect: 22258275.70779209
[2025-10-13 07:28:48] 2025-10-13 10:30:42,158 | INFO     | current memory leak: -0.01 B/s (using 322 data points, chi2=0.21)
[2025-10-13 07:28:48] 2025-10-13 10:30:42,159 | INFO     | could have reported an average CPU frequency of 2767 MHz (15 samples)
[2025-10-13 07:28:48] 2025-10-13 10:30:42,159 | INFO     | ..............................
[2025-10-13 07:28:48] 2025-10-13 10:30:42,159 | INFO     | . Timing measurements:
[2025-10-13 07:28:48] 2025-10-13 10:30:42,159 | INFO     | . get job = 0 s
[2025-10-13 07:28:48] 2025-10-13 10:30:42,159 | INFO     | . initial setup = 8 s
[2025-10-13 07:28:48] 2025-10-13 10:30:42,159 | INFO     | . payload setup = 65 s
[2025-10-13 07:28:48] 2025-10-13 10:30:42,159 | INFO     | . stage-in = 0 s
[2025-10-13 07:28:48] 2025-10-13 10:30:42,159 | INFO     | . payload execution = 21828 s
[2025-10-13 07:28:48] 2025-10-13 10:30:42,239 | INFO     | . stage-out = 14 s
[2025-10-13 07:28:48] 2025-10-13 10:30:42,239 | INFO     | . log creation = 3 s
[2025-10-13 07:28:48] 2025-10-13 10:30:42,239 | INFO     | ..............................
[2025-10-13 07:28:48] 2025-10-13 10:30:42,239 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-13 07:28:48] 2025-10-13 10:30:42,240 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/4/PanDA_Pilot-6837962171/pilotlog.txt
[2025-10-13 07:28:48] 2025-10-13 10:30:42,591 | WARNING  | 
[2025-10-13 07:28:48] [begin log extracts]
[2025-10-13 07:28:48] - Log from pilotlog.txt -
[2025-10-13 07:28:48] 2025-10-13 10:30:42,157 | INFO     | mean x: 1760341086.5248446
[2025-10-13 07:28:48] 2025-10-13 10:30:42,157 | INFO     | mean y: 2562406.7236024844
[2025-10-13 07:28:48] 2025-10-13 10:30:42,157 | INFO     | -- intersect: 22258275.70779209
[2025-10-13 07:28:48] 2025-10-13 10:30:42,157 | INFO     | intersect: 22258275.70779209
[2025-10-13 07:28:48] 2025-10-13 10:30:42,158 | INFO     | chi2: 0.2099548762621694
[2025-10-13 07:28:48] 2025-10-13 10:30:42,158 | INFO     | -- intersect: 22258275.70779209
[2025-10-13 07:28:48] 2025-10-13 10:30:42,158 | INFO     | current memory leak: -0.01 B/s (using 322 data points, chi2=0.21)
[2025-10-13 07:28:48] 2025-10-13 10:30:42,159 | INFO     | could have reported an average CPU frequency of 2767 MHz (15 samples)
[2025-10-13 07:28:48] 2025-10-13 10:30:42,159 | INFO     | ..............................
[2025-10-13 07:28:48] 2025-10-13 10:30:42,159 | INFO     | . Timing measurements:
[2025-10-13 07:28:48] 2025-10-13 10:30:42,159 | INFO     | . get job = 0 s
[2025-10-13 07:28:48] 2025-10-13 10:30:42,159 | INFO     | . initial setup = 8 s
[2025-10-13 07:28:48] 2025-10-13 10:30:42,159 | INFO     | . payload setup = 65 s
[2025-10-13 07:28:48] 2025-10-13 10:30:42,159 | INFO     | . stage-in = 0 s
[2025-10-13 07:28:48] 2025-10-13 10:30:42,159 | INFO     | . payload execution = 21828 s
[2025-10-13 07:28:48] 2025-10-13 10:30:42,239 | INFO     | . stage-out = 14 s
[2025-10-13 07:28:48] 2025-10-13 10:30:42,239 | INFO     | . log creation = 3 s
[2025-10-13 07:28:48] 2025-10-13 10:30:42,239 | INFO     | ..............................
[2025-10-13 07:28:48] 2025-10-13 10:30:42,239 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-13 07:28:48] 2025-10-13 10:30:42,240 | INFO     | executing command: tail -n 20 /tmp/boinchome/slots/4/PanDA_Pilot-6837962171/pilotlog.txt
[2025-10-13 07:28:48] [end log extracts]
[2025-10-13 07:28:48] 2025-10-13 10:30:42,592 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-13 07:28:48] 2025-10-13 10:30:42,592 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a 
[2025-10-13 07:28:48] 2025-10-13 10:30:42,745 | INFO     | time since job start (22182s) is within the limit (172800.0s)
[2025-10-13 07:28:48] 2025-10-13 10:30:43,959 | INFO     | 
[2025-10-13 07:28:48] 2025-10-13 10:30:43,959 | INFO     | job summary report
[2025-10-13 07:28:48] 2025-10-13 10:30:43,959 | INFO     | --------------------------------------------------
[2025-10-13 07:28:48] 2025-10-13 10:30:43,959 | INFO     | PanDA job id: 6837962171
[2025-10-13 07:28:48] 2025-10-13 10:30:43,959 | INFO     | task id: 46676269
[2025-10-13 07:28:48] 2025-10-13 10:30:43,959 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-13 10:27:21,468 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-13 07:28:48] 2025-10-13 10:30:43,959 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:28:48] 2025-10-13 10:30:43,960 | INFO     | pilot state: failed 
[2025-10-13 07:28:48] 2025-10-13 10:30:43,960 | INFO     | transexitcode: 65
[2025-10-13 07:28:48] 2025-10-13 10:30:43,960 | INFO     | exeerrorcode: 65
[2025-10-13 07:28:48] 2025-10-13 10:30:43,960 | INFO     | exeerrordiag: EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: "ISF_Kernel_FullG4MT_QS                               276     0   FA
[2025-10-13 07:28:48] 2025-10-13 10:30:43,960 | INFO     | exitcode: 65
[2025-10-13 07:28:48] 2025-10-13 10:30:43,960 | INFO     | exitmsg: EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: "ISF_Kernel_FullG4MT_QS                               276     0   FATAL  
[2025-10-13 07:28:48] 2025-10-13 10:30:43,960 | INFO     | cpuconsumptiontime: 31164 s
[2025-10-13 07:28:48] 2025-10-13 10:30:43,960 | INFO     | nevents: 0
[2025-10-13 07:28:48] 2025-10-13 10:30:43,960 | INFO     | neventsw: 0
[2025-10-13 07:28:48] 2025-10-13 10:30:43,960 | INFO     | pid: 2913301
[2025-10-13 07:28:48] 2025-10-13 10:30:43,960 | INFO     | pgrp: 2913301
[2025-10-13 07:28:48] 2025-10-13 10:30:43,961 | INFO     | corecount: 9
[2025-10-13 07:28:48] 2025-10-13 10:30:43,961 | INFO     | event service: False
[2025-10-13 07:28:48] 2025-10-13 10:30:43,961 | INFO     | sizes: {0: 2348686, 2: 2348857, 5: 2348941, 17: 2348941, 28: 2348969, 39: 2348997, 43: 2349415, 51: 2349443, 21903: 2388674, 21920: 2392969, 21921: 2393025, 22088:
[2025-10-13 07:28:48] 2025-10-13 10:30:43,961 | INFO     | --------------------------------------------------
[2025-10-13 07:28:48] 2025-10-13 10:30:43,961 | INFO     | 
[2025-10-13 07:28:48] 2025-10-13 10:30:43,961 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-13 07:28:48] 2025-10-13 10:30:44,183 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:28:48] 2025-10-13 10:30:44,184 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:28:48] 2025-10-13 10:30:44,184 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:28:48] 2025-10-13 10:30:44,184 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:28:48] 2025-10-13 10:30:44,184 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:28:48] 2025-10-13 10:30:44,184 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:28:48] 2025-10-13 10:30:44,185 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:28:48] 2025-10-13 10:30:44,185 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:28:48] 2025-10-13 10:30:44,185 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:28:48] 2025-10-13 10:30:44,185 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:28:48] 2025-10-13 10:30:44,185 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:28:48] 2025-10-13 10:30:44,185 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:28:48] 2025-10-13 10:30:44,185 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:28:48] 2025-10-13 10:30:44,185 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:28:48] 2025-10-13 10:30:44,185 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:28:48] 2025-10-13 10:30:44,185 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:28:48] 2025-10-13 10:30:44,186 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:28:48] 2025-10-13 10:30:44,186 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:28:48] 2025-10-13 10:30:44,186 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:28:48] 2025-10-13 10:30:44,186 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:28:48] 2025-10-13 10:30:44,186 | INFO     | job 6837962171 has completed (purged errors)
[2025-10-13 07:28:48] 2025-10-13 10:30:44,211 | INFO     | overall cleanup function is called
[2025-10-13 07:28:48] 2025-10-13 10:30:45,236 | INFO     | --- collectZombieJob: --- 10, [2913301]
[2025-10-13 07:28:48] 2025-10-13 10:30:45,236 | INFO     | zombie collector waiting for pid 2913301
[2025-10-13 07:28:48] 2025-10-13 10:30:45,236 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:28:48] 2025-10-13 10:30:45,236 | INFO     | collected zombie processes
[2025-10-13 07:28:48] 2025-10-13 10:30:45,236 | INFO     | will attempt to kill all subprocesses of pid=2913301
[2025-10-13 07:28:48] 2025-10-13 10:30:47,026 | INFO     | process IDs to be killed: [2913301] (in reverse order)
[2025-10-13 07:28:48] 2025-10-13 10:30:47,211 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:28:48] 2025-10-13 10:30:47,212 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:28:48] 2025-10-13 10:30:47,240 | INFO     | did not find any defunct processes belonging to 2913301
[2025-10-13 07:28:48] 2025-10-13 10:30:47,262 | INFO     | did not find any defunct processes belonging to 2913301
[2025-10-13 07:28:48] 2025-10-13 10:30:47,262 | INFO     | ready for new job
[2025-10-13 07:28:48] 2025-10-13 10:30:47,262 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:28:48] 2025-10-13 10:30:47,276 | INFO     | ***************************************
[2025-10-13 07:28:48] 2025-10-13 10:30:47,276 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:28:48] 2025-10-13 10:30:47,276 | INFO     | ***************************************
[2025-10-13 07:28:48] 2025-10-13 10:30:47,276 | INFO     | 
[2025-10-13 07:28:48] 2025-10-13 10:30:47,318 | INFO     | architecture information:
[2025-10-13 07:28:48] 2025-10-13 10:30:47,343 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:28:48] 2025-10-13 10:30:47,574 | INFO     | cat /etc/os-release:
[2025-10-13 07:28:48] NAME="CentOS Linux"
[2025-10-13 07:28:48] VERSION="7 (Core)"
[2025-10-13 07:28:48] ID="centos"
[2025-10-13 07:28:48] ID_LIKE="rhel fedora"
[2025-10-13 07:28:48] VERSION_ID="7"
[2025-10-13 07:28:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:28:48] ANSI_COLOR="0;31"
[2025-10-13 07:28:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:28:48] HOME_URL="https://www.centos.org/"
[2025-10-13 07:28:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:28:48] 
[2025-10-13 07:28:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:28:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:28:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:28:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:28:48] 
[2025-10-13 07:28:48] 2025-10-13 10:30:47,574 | INFO     | ***************************************
[2025-10-13 07:28:48] 2025-10-13 10:30:48,078 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-13 07:28:48] 2025-10-13 10:30:48,263 | INFO     | sufficient remaining disk space (73908879360 B)
[2025-10-13 07:28:48] 2025-10-13 10:30:48,263 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:28:48] 2025-10-13 10:30:48,264 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:28:48] 2025-10-13 10:30:48,264 | INFO     | update_server=False
[2025-10-13 07:28:48] 2025-10-13 10:30:48,264 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:28:48] 2025-10-13 10:30:48,280 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:28:48] 2025-10-13 10:30:48,280 | INFO     | aborting loop
[2025-10-13 07:28:48] 2025-10-13 10:30:48,341 | INFO     | all payload control threads have been joined
[2025-10-13 07:28:48] 2025-10-13 10:30:48,452 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:28:48] 2025-10-13 10:30:48,622 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:28:48] 2025-10-13 10:30:48,640 | INFO     | all data control threads have been joined
[2025-10-13 07:28:48] 2025-10-13 10:30:48,970 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:28:48] 2025-10-13 10:30:49,271 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:28:48] 2025-10-13 10:30:49,286 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:28:48] 2025-10-13 10:30:49,318 | INFO     | [job] validate thread has finished
[2025-10-13 07:28:48] 2025-10-13 10:30:49,318 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:28:48] 2025-10-13 10:30:49,346 | INFO     | [payload] control thread has finished
[2025-10-13 07:28:48] 2025-10-13 10:30:49,638 | INFO     | all job control threads have been joined
[2025-10-13 07:28:48] 2025-10-13 10:30:49,665 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:28:48] 2025-10-13 10:30:49,673 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:28:48] 2025-10-13 10:30:49,673 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:28:48] 2025-10-13 10:30:49,674 | INFO     | [data] control thread has finished
[2025-10-13 07:28:48] 2025-10-13 10:30:49,976 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:28:48] 2025-10-13 10:30:50,231 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:28:48] 2025-10-13 10:30:50,497 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:28:48] 2025-10-13 10:30:50,516 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:28:48] 2025-10-13 10:30:50,644 | INFO     | [job] control thread has finished
[2025-10-13 07:28:48] 2025-10-13 10:30:50,726 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:28:48] 2025-10-13 10:30:52,667 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:28:48] 2025-10-13 10:31:17,710 | INFO     | PID=2892452 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:28:48] 2025-10-13 10:31:17,712 | INFO     | .. there are 31 such processes running
[2025-10-13 07:28:48] 2025-10-13 10:31:17,713 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:28:48] 2025-10-13 10:31:17,713 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:28:48] 2025-10-13 10:31:17,713 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:28:48] 2025-10-13 10:31:47,423 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:28:48] 2025-10-13 10:31:48,920 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139972507531072)>', '<ExcThread(monitor, started 139971994294016)>']
[2025-10-13 07:28:48] 2025-10-13 10:31:49,108 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:28:48] 2025-10-13 10:31:49,108 | INFO     | [monitor] control thread has ended
[2025-10-13 07:28:48] 2025-10-13 10:31:53,946 | INFO     | all workflow threads have been joined
[2025-10-13 07:28:48] 2025-10-13 10:31:53,946 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:28:48] 2025-10-13 10:31:53,946 | INFO     | traces error code: 0
[2025-10-13 07:28:48] 2025-10-13 10:31:53,946 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:28:48] 2025-10-13 10:31:58,787 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:28:48] 2025-10-13 10:31:58,837 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:28:48] 2025-10-13 10:31:58,928 [wrapper] pilotpid: 2892452
[2025-10-13 07:28:48] 2025-10-13 10:31:58,933 [wrapper] Pilot exit status: 0
[2025-10-13 07:28:48] 2025-10-13 10:31:59,055 [wrapper] pandaids: 6837962171
[2025-10-13 07:28:48] 2025-10-13 10:32:00,157 [wrapper] cleanup supervisor_pilot 3936441 2892453
[2025-10-13 07:28:48] 2025-10-13 10:32:00,196 [wrapper] Test setup, not cleaning
[2025-10-13 07:28:48] 2025-10-13 10:32:00,200 [wrapper] apfmon messages muted
[2025-10-13 07:28:48] 2025-10-13 10:32:00,204 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:28:48] 2025-10-13 10:32:00,211 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:28:48]  *** Error codes and diagnostics ***
[2025-10-13 07:28:48]     "exeErrorCode": 65,
[2025-10-13 07:28:48]     "exeErrorDiag": "EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: \"ISF_Kernel_FullG4MT_QS                               276     0   FATAL  Standard std::exception is caught\"",
[2025-10-13 07:28:48]     "pilotErrorCode": 1305,
[2025-10-13 07:28:48]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGHUP signal (exit code 129); Logfile error in log.EVNTtoHITS: \"ISF_Kernel_FullG4MT_QS                               276     0   FATAL  Stand",
[2025-10-13 07:28:48]  *** Listing of results directory ***
[2025-10-13 07:28:48] total 225640
[2025-10-13 07:28:48] -rw-r--r--. 1 boincer umatlas    557409 Oct 10 22:50 pilot3.tar.gz
[2025-10-13 07:28:48] -rw-r--r--. 1 boincer umatlas      5112 Oct 10 23:00 queuedata.json
[2025-10-13 07:28:48] -rwx------. 1 boincer umatlas     36292 Oct 10 23:02 runpilot2-wrapper.sh
[2025-10-13 07:28:48] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:28:48] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:19 run_atlas
[2025-10-13 07:28:48] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:19 job.xml
[2025-10-13 07:28:48] -rw-r--r--. 2 boincer umatlas 221422003 Oct 13 00:19 EVNT.46676267._002010.pool.root.1
[2025-10-13 07:28:48] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:19 start_atlas.sh
[2025-10-13 07:28:48] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:19 shared
[2025-10-13 07:28:48] -rw-r--r--. 2 boincer umatlas    569677 Oct 13 00:19 input.tar.gz
[2025-10-13 07:28:48] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:19 boinc_lockfile
[2025-10-13 07:28:48] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:19 pandaJob.out
[2025-10-13 07:28:48] -rw-------. 1 boincer umatlas    974365 Oct 13 00:20 agis_schedconf.cvmfs.json
[2025-10-13 07:28:48] drwx------. 5 boincer umatlas      4096 Oct 13 00:21 pilot3
[2025-10-13 07:28:48] -rw-r--r--. 1 boincer umatlas       531 Oct 13 06:26 boinc_task_state.xml
[2025-10-13 07:28:48] -rw-------. 1 boincer umatlas      1054 Oct 13 06:27 memory_monitor_summary.json
[2025-10-13 07:28:48] -rw-------. 1 boincer umatlas    525267 Oct 13 06:27 log.46676269._049880.job.log.tgz.1
[2025-10-13 07:28:48] -rw-------. 1 boincer umatlas   1560580 Oct 13 06:27 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:28:48] -rw-------. 1 boincer umatlas        95 Oct 13 06:30 pilot_heartbeat.json
[2025-10-13 07:28:48] -rw-------. 1 boincer umatlas     11904 Oct 13 06:30 heartbeat.json
[2025-10-13 07:28:48] -rw-------. 1 boincer umatlas      4824 Oct 13 06:31 pilotlog.txt
[2025-10-13 07:28:48] -rw-------. 1 boincer umatlas   2341164 Oct 13 06:32 log.46676269._049880.job.log.1
[2025-10-13 07:28:48] -rw-------. 1 boincer umatlas       188 Oct 13 06:32 output.list
[2025-10-13 07:28:48] -rw-r--r--. 1 boincer umatlas       620 Oct 13 06:32 runtime_log
[2025-10-13 07:28:48] -rw-------. 1 boincer umatlas   2887680 Oct 13 06:32 result.tar.gz
[2025-10-13 07:28:48] -rw-r--r--. 1 boincer umatlas      8557 Oct 13 06:32 runtime_log.err
[2025-10-13 07:28:48] -rw-------. 1 boincer umatlas       657 Oct 13 06:32 BMxNDmN3eR8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8FfNDmB5Xdhn.diag
[2025-10-13 07:28:48] -rw-r--r--. 1 boincer umatlas      6840 Oct 13 07:28 init_data.xml
[2025-10-13 07:28:48] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 07:28 boinc_mmap_file
[2025-10-13 07:28:48] -rw-r--r--. 1 boincer umatlas        28 Oct 13 07:28 wrapper_checkpoint.txt
[2025-10-13 07:28:48] -rw-r--r--. 1 boincer umatlas     22022 Oct 13 07:28 stderr.txt
[2025-10-13 07:28:48] No HITS result produced
[2025-10-13 07:28:48]  *** Contents of shared directory: ***
[2025-10-13 07:28:48] total 219632
[2025-10-13 07:28:48] -rw-r--r--. 2 boincer umatlas 221422003 Oct 13 00:19 ATLAS.root_0
[2025-10-13 07:28:48] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:19 start_atlas.sh
[2025-10-13 07:28:48] -rw-r--r--. 2 boincer umatlas    569677 Oct 13 00:19 input.tar.gz
[2025-10-13 07:28:48] -rw-------. 1 boincer umatlas   2887680 Oct 13 06:32 result.tar.gz
07:28:50 (2882428): run_atlas exited; CPU time 31864.068276
07:28:50 (2882428): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN