Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:38 (2518469): wrapper (7.7.26015): starting
00:04:38 (2518469): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 00:04:38] Arguments: --nthreads 8
[2025-10-13 00:04:38] Threads: 8
[2025-10-13 00:04:38] Checking for CVMFS
[2025-10-13 00:04:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:04:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:04:39] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:04:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:04:40] 2.13.2.0 709547 78319 396324 151647 1 800 25734382 32935937 45951 16776704 0 542625336 99.704 403243211 17479 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:04:40] CVMFS is ok
[2025-10-13 00:04:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:04:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:04:40] Further information can be found at the LHC@home message board.
[2025-10-13 00:04:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:04:40] Checking for apptainer binary...
[2025-10-13 00:04:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:04:40] Running /usr/bin/apptainer --version
[2025-10-13 00:04:40] apptainer version 1.4.3-1.el9
[2025-10-13 00:04:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:04:40] c7-2-37.aglt2.org
[2025-10-13 00:04:40] apptainer works
[2025-10-13 00:04:40] Set ATHENA_PROC_NUMBER=8
[2025-10-13 00:04:40] Set ATHENA_CORE_NUMBER=8
[2025-10-13 00:04:40] Starting ATLAS job with PandaID=6840969727
[2025-10-13 00:04:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:03:37]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:03:38] 2025-10-13 13:03:20,275 | INFO     | fitting pss+swap vs Time
[2025-10-13 09:03:38] 2025-10-13 13:03:20,275 | INFO     | sum of square deviations: 45385277229.233345
[2025-10-13 09:03:38] 2025-10-13 13:03:20,280 | INFO     | sum of deviations: 491491901632.0413
[2025-10-13 09:03:38] 2025-10-13 13:03:20,281 | INFO     | mean x: 1760344501.178368
[2025-10-13 09:03:38] 2025-10-13 13:03:20,281 | INFO     | mean y: 2136503.7229601517
[2025-10-13 09:03:38] 2025-10-13 13:03:20,281 | INFO     | -- intersect: -19061205602.610546
[2025-10-13 09:03:38] 2025-10-13 13:03:20,281 | INFO     | intersect: -19061205602.610546
[2025-10-13 09:03:38] 2025-10-13 13:03:20,281 | INFO     | chi2: 5.225605202231211
[2025-10-13 09:03:38] 2025-10-13 13:03:20,282 | INFO     | sum of square deviations: 44105737721.57307
[2025-10-13 09:03:38] 2025-10-13 13:03:20,286 | INFO     | sum of deviations: 486598873201.7892
[2025-10-13 09:03:38] 2025-10-13 13:03:20,287 | INFO     | mean x: 1760344348.6800766
[2025-10-13 09:03:38] 2025-10-13 13:03:20,287 | INFO     | mean y: 2135918.268199234
[2025-10-13 09:03:38] 2025-10-13 13:03:20,287 | INFO     | -- intersect: -19418955775.56578
[2025-10-13 09:03:38] 2025-10-13 13:03:20,287 | INFO     | intersect: -19418955775.56578
[2025-10-13 09:03:38] 2025-10-13 13:03:20,287 | INFO     | chi2: 5.216029653541267
[2025-10-13 09:03:38] 2025-10-13 13:03:20,287 | INFO     | current chi2=5.216029653541267 (change=0.1832428650724609 %)
[2025-10-13 09:03:38] 2025-10-13 13:03:20,287 | INFO     | right removable region: 521
[2025-10-13 09:03:38] 2025-10-13 13:03:20,288 | INFO     | sum of square deviations: 44105680381.57307
[2025-10-13 09:03:38] 2025-10-13 13:03:20,292 | INFO     | sum of deviations: 354474984524.84503
[2025-10-13 09:03:38] 2025-10-13 13:03:20,293 | INFO     | mean x: 1760344653.6800766
[2025-10-13 09:03:38] 2025-10-13 13:03:20,293 | INFO     | mean y: 2152820.879310345
[2025-10-13 09:03:38] 2025-10-13 13:03:20,293 | INFO     | -- intersect: -14145642621.186682
[2025-10-13 09:03:38] 2025-10-13 13:03:20,293 | INFO     | intersect: -14145642621.186682
[2025-10-13 09:03:38] 2025-10-13 13:03:20,293 | INFO     | chi2: 1.9251269446321364
[2025-10-13 09:03:38] 2025-10-13 13:03:20,293 | INFO     | current chi2=1.9251269446321364 (change=63.15973231559566 %)
[2025-10-13 09:03:38] 2025-10-13 13:03:20,294 | INFO     | sum of square deviations: 42850363058.909096
[2025-10-13 09:03:38] 2025-10-13 13:03:20,298 | INFO     | sum of deviations: 276485798361.5455
[2025-10-13 09:03:38] 2025-10-13 13:03:20,298 | INFO     | mean x: 1760344806.1818182
[2025-10-13 09:03:38] 2025-10-13 13:03:20,298 | INFO     | mean y: 2162285.015473888
[2025-10-13 09:03:38] 2025-10-13 13:03:20,299 | INFO     | -- intersect: -11356209135.540955
[2025-10-13 09:03:38] 2025-10-13 13:03:20,299 | INFO     | intersect: -11356209135.540955
[2025-10-13 09:03:38] 2025-10-13 13:03:20,299 | INFO     | chi2: 0.9269942352216423
[2025-10-13 09:03:38] 2025-10-13 13:03:20,299 | INFO     | current chi2=0.9269942352216423 (change=51.84763073383832 %)
[2025-10-13 09:03:38] 2025-10-13 13:03:20,300 | INFO     | sum of square deviations: 41619092698.74219
[2025-10-13 09:03:38] 2025-10-13 13:03:20,305 | INFO     | sum of deviations: 241382936380.66397
[2025-10-13 09:03:38] 2025-10-13 13:03:20,305 | INFO     | mean x: 1760344958.6835938
[2025-10-13 09:03:38] 2025-10-13 13:03:20,305 | INFO     | mean y: 2166632.423828125
[2025-10-13 09:03:38] 2025-10-13 13:03:20,305 | INFO     | -- intersect: -10207504160.874996
[2025-10-13 09:03:38] 2025-10-13 13:03:20,305 | INFO     | intersect: -10207504160.874996
[2025-10-13 09:03:38] 2025-10-13 13:03:20,305 | INFO     | chi2: 0.7719686181650203
[2025-10-13 09:03:38] 2025-10-13 13:03:20,305 | INFO     | current chi2=0.7719686181650203 (change=16.72347153481011 %)
[2025-10-13 09:03:38] 2025-10-13 13:03:20,306 | INFO     | left removable region: 30
[2025-10-13 09:03:38] 2025-10-13 13:03:20,306 | INFO     | sum of square deviations: 36705170354.003975
[2025-10-13 09:03:38] 2025-10-13 13:03:20,310 | INFO     | sum of deviations: 136278463217.36653
[2025-10-13 09:03:38] 2025-10-13 13:03:20,310 | INFO     | mean x: 1760345233.191446
[2025-10-13 09:03:38] 2025-10-13 13:03:20,310 | INFO     | mean y: 2179540.2301425664
[2025-10-13 09:03:38] 2025-10-13 13:03:20,310 | INFO     | -- intersect: -6533606584.657788
[2025-10-13 09:03:38] 2025-10-13 13:03:20,310 | INFO     | intersect: -6533606584.657788
[2025-10-13 09:03:38] 2025-10-13 13:03:20,311 | INFO     | chi2: 0.2819251285824384
[2025-10-13 09:03:38] 2025-10-13 13:03:20,312 | INFO     | -- intersect: -6533606584.657788
[2025-10-13 09:03:38] 2025-10-13 13:03:20,312 | INFO     | current memory leak: 3.71 B/s (using 491 data points, chi2=0.28)
[2025-10-13 09:03:38] 2025-10-13 13:03:20,312 | INFO     | could have reported an average CPU frequency of 3185 MHz (21 samples)
[2025-10-13 09:03:38] 2025-10-13 13:03:20,312 | INFO     | ..............................
[2025-10-13 09:03:38] 2025-10-13 13:03:20,312 | INFO     | . Timing measurements:
[2025-10-13 09:03:38] 2025-10-13 13:03:20,313 | INFO     | . get job = 0 s
[2025-10-13 09:03:38] 2025-10-13 13:03:20,313 | INFO     | . initial setup = 6 s
[2025-10-13 09:03:38] 2025-10-13 13:03:20,313 | INFO     | . payload setup = 40 s
[2025-10-13 09:03:38] 2025-10-13 13:03:20,313 | INFO     | . stage-in = 0 s
[2025-10-13 09:03:38] 2025-10-13 13:03:20,313 | INFO     | . payload execution = 32154 s
[2025-10-13 09:03:38] 2025-10-13 13:03:20,313 | INFO     | . stage-out = 2 s
[2025-10-13 09:03:38] 2025-10-13 13:03:20,313 | INFO     | . log creation = 0 s
[2025-10-13 09:03:38] 2025-10-13 13:03:20,313 | INFO     | ..............................
[2025-10-13 09:03:38] 2025-10-13 13:03:20,376 | INFO     | 
[2025-10-13 09:03:38] 2025-10-13 13:03:20,377 | INFO     | job summary report
[2025-10-13 09:03:38] 2025-10-13 13:03:20,377 | INFO     | --------------------------------------------------
[2025-10-13 09:03:38] 2025-10-13 13:03:20,377 | INFO     | PanDA job id: 6840969727
[2025-10-13 09:03:38] 2025-10-13 13:03:20,377 | INFO     | task id: 46676269
[2025-10-13 09:03:38] 2025-10-13 13:03:20,377 | INFO     | errors: (none)
[2025-10-13 09:03:38] 2025-10-13 13:03:20,377 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:03:38] 2025-10-13 13:03:20,377 | INFO     | pilot state: finished 
[2025-10-13 09:03:38] 2025-10-13 13:03:20,377 | INFO     | transexitcode: 0
[2025-10-13 09:03:38] 2025-10-13 13:03:20,377 | INFO     | exeerrorcode: 0
[2025-10-13 09:03:38] 2025-10-13 13:03:20,377 | INFO     | exeerrordiag: 
[2025-10-13 09:03:38] 2025-10-13 13:03:20,377 | INFO     | exitcode: 0
[2025-10-13 09:03:38] 2025-10-13 13:03:20,378 | INFO     | exitmsg: OK
[2025-10-13 09:03:38] 2025-10-13 13:03:20,378 | INFO     | cpuconsumptiontime: 34623 s
[2025-10-13 09:03:38] 2025-10-13 13:03:20,378 | INFO     | nevents: 400
[2025-10-13 09:03:38] 2025-10-13 13:03:20,378 | INFO     | neventsw: 0
[2025-10-13 09:03:38] 2025-10-13 13:03:20,378 | INFO     | pid: 2552123
[2025-10-13 09:03:38] 2025-10-13 13:03:20,378 | INFO     | pgrp: 2552123
[2025-10-13 09:03:38] 2025-10-13 13:03:20,378 | INFO     | corecount: 8
[2025-10-13 09:03:38] 2025-10-13 13:03:20,378 | INFO     | event service: False
[2025-10-13 09:03:38] 2025-10-13 13:03:20,378 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348885, 12: 2348913, 23: 2348941, 24: 2349231, 34: 2349387, 32199: 2387998, 32202: 2396996, 32206: 2397052, 32214: 2397246}
[2025-10-13 09:03:38] 2025-10-13 13:03:20,378 | INFO     | --------------------------------------------------
[2025-10-13 09:03:38] 2025-10-13 13:03:20,379 | INFO     | 
[2025-10-13 09:03:38] 2025-10-13 13:03:20,379 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-13 09:03:38] 2025-10-13 13:03:20,404 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:03:38] 2025-10-13 13:03:20,404 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:03:38] 2025-10-13 13:03:20,404 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:03:38] 2025-10-13 13:03:20,404 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:03:38] 2025-10-13 13:03:20,404 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:03:38] 2025-10-13 13:03:20,404 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:03:38] 2025-10-13 13:03:20,404 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:03:38] 2025-10-13 13:03:20,404 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:03:38] 2025-10-13 13:03:20,404 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:03:38] 2025-10-13 13:03:20,405 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:03:38] 2025-10-13 13:03:20,405 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:03:38] 2025-10-13 13:03:20,405 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:03:38] 2025-10-13 13:03:20,405 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:03:38] 2025-10-13 13:03:20,405 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:03:38] 2025-10-13 13:03:20,405 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:03:38] 2025-10-13 13:03:20,405 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:03:38] 2025-10-13 13:03:20,405 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:03:38] 2025-10-13 13:03:20,405 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:03:38] 2025-10-13 13:03:20,405 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:03:38] 2025-10-13 13:03:20,405 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:03:38] 2025-10-13 13:03:20,405 | INFO     | job 6840969727 has completed (purged errors)
[2025-10-13 09:03:38] 2025-10-13 13:03:20,405 | INFO     | overall cleanup function is called
[2025-10-13 09:03:38] 2025-10-13 13:03:21,413 | INFO     | --- collectZombieJob: --- 10, [2552123]
[2025-10-13 09:03:38] 2025-10-13 13:03:21,414 | INFO     | zombie collector waiting for pid 2552123
[2025-10-13 09:03:38] 2025-10-13 13:03:21,414 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:03:38] 2025-10-13 13:03:21,414 | INFO     | collected zombie processes
[2025-10-13 09:03:38] 2025-10-13 13:03:21,414 | INFO     | will attempt to kill all subprocesses of pid=2552123
[2025-10-13 09:03:38] 2025-10-13 13:03:22,348 | INFO     | PID=2528421 has CPU usage=14.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 09:03:38] 2025-10-13 13:03:22,348 | INFO     | .. there are 44 such processes running
[2025-10-13 09:03:38] 2025-10-13 13:03:22,407 | INFO     | process IDs to be killed: [2552123] (in reverse order)
[2025-10-13 09:03:38] 2025-10-13 13:03:22,548 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:03:38] 2025-10-13 13:03:22,548 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:03:38] 2025-10-13 13:03:22,569 | INFO     | did not find any defunct processes belonging to 2552123
[2025-10-13 09:03:38] 2025-10-13 13:03:22,593 | INFO     | did not find any defunct processes belonging to 2552123
[2025-10-13 09:03:38] 2025-10-13 13:03:22,594 | INFO     | ready for new job
[2025-10-13 09:03:38] 2025-10-13 13:03:22,594 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:03:38] 2025-10-13 13:03:22,598 | INFO     | ***************************************
[2025-10-13 09:03:38] 2025-10-13 13:03:22,598 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:03:38] 2025-10-13 13:03:22,598 | INFO     | ***************************************
[2025-10-13 09:03:38] 2025-10-13 13:03:22,598 | INFO     | 
[2025-10-13 09:03:38] 2025-10-13 13:03:22,620 | INFO     | architecture information:
[2025-10-13 09:03:38] 2025-10-13 13:03:22,621 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:03:38] 2025-10-13 13:03:22,643 | INFO     | cat /etc/os-release:
[2025-10-13 09:03:38] NAME="CentOS Linux"
[2025-10-13 09:03:38] VERSION="7 (Core)"
[2025-10-13 09:03:38] ID="centos"
[2025-10-13 09:03:38] ID_LIKE="rhel fedora"
[2025-10-13 09:03:38] VERSION_ID="7"
[2025-10-13 09:03:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:03:38] ANSI_COLOR="0;31"
[2025-10-13 09:03:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:03:38] HOME_URL="https://www.centos.org/"
[2025-10-13 09:03:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:03:38] 
[2025-10-13 09:03:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:03:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:03:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:03:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:03:38] 
[2025-10-13 09:03:38] 2025-10-13 13:03:22,644 | INFO     | ***************************************
[2025-10-13 09:03:38] 2025-10-13 13:03:23,146 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-13 09:03:38] 2025-10-13 13:03:23,165 | INFO     | sufficient remaining disk space (75671535616 B)
[2025-10-13 09:03:38] 2025-10-13 13:03:23,165 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:03:38] 2025-10-13 13:03:23,165 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:03:38] 2025-10-13 13:03:23,165 | INFO     | update_server=False
[2025-10-13 09:03:38] 2025-10-13 13:03:23,165 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:03:38] 2025-10-13 13:03:23,166 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 09:03:38] 2025-10-13 13:03:23,166 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:03:38] 2025-10-13 13:03:23,166 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:03:38] 2025-10-13 13:03:23,166 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:03:38] 2025-10-13 13:03:23,489 | INFO     | all data control threads have been joined
[2025-10-13 09:03:38] 2025-10-13 13:03:23,593 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 09:03:38] 2025-10-13 13:03:23,593 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 09:03:38] 2025-10-13 13:03:23,593 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:03:38] 2025-10-13 13:03:23,593 | INFO     | will abort loop
[2025-10-13 09:03:38] 2025-10-13 13:03:23,908 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:03:38] 2025-10-13 13:03:23,942 | INFO     | all payload control threads have been joined
[2025-10-13 09:03:38] 2025-10-13 13:03:24,132 | INFO     | all job control threads have been joined
[2025-10-13 09:03:38] 2025-10-13 13:03:24,171 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:03:38] 2025-10-13 13:03:24,313 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:03:38] 2025-10-13 13:03:24,494 | INFO     | [data] control thread has finished
[2025-10-13 09:03:38] 2025-10-13 13:03:24,599 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:03:38] 2025-10-13 13:03:24,745 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:03:38] 2025-10-13 13:03:24,775 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:03:38] 2025-10-13 13:03:24,811 | INFO     | [job] validate thread has finished
[2025-10-13 09:03:38] 2025-10-13 13:03:24,950 | INFO     | [payload] control thread has finished
[2025-10-13 09:03:38] 2025-10-13 13:03:25,025 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:03:38] 2025-10-13 13:03:25,138 | INFO     | [job] control thread has finished
[2025-10-13 09:03:38] 2025-10-13 13:03:25,399 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:03:38] 2025-10-13 13:03:25,449 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:03:38] 2025-10-13 13:03:25,587 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:03:38] 2025-10-13 13:03:25,596 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:03:38] 2025-10-13 13:03:25,917 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:03:38] 2025-10-13 13:03:26,405 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:03:38] 2025-10-13 13:03:26,657 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:03:38] 2025-10-13 13:03:30,335 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:03:38] 2025-10-13 13:03:30,664 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:03:38] 2025-10-13 13:03:32,414 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140467497674560)>', '<ExcThread(monitor, started 140467148670720)>']
[2025-10-13 09:03:38] 2025-10-13 13:03:33,237 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:03:38] 2025-10-13 13:03:33,237 | INFO     | [monitor] control thread has ended
[2025-10-13 09:03:38] 2025-10-13 13:03:37,440 | INFO     | all workflow threads have been joined
[2025-10-13 09:03:38] 2025-10-13 13:03:37,441 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:03:38] 2025-10-13 13:03:37,442 | INFO     | traces error code: 0
[2025-10-13 09:03:38] 2025-10-13 13:03:37,442 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:03:38] 2025-10-13 13:03:37,637 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:03:38] 2025-10-13 13:03:37,641 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:03:38] 2025-10-13 13:03:37,643 [wrapper] pilotpid: 2528421
[2025-10-13 09:03:38] 2025-10-13 13:03:37,645 [wrapper] Pilot exit status: 0
[2025-10-13 09:03:38] 2025-10-13 13:03:37,657 [wrapper] pandaids: 6840969727
[2025-10-13 09:03:38] 2025-10-13 13:03:37,770 [wrapper] cleanup supervisor_pilot 1453427 2528422
[2025-10-13 09:03:38] 2025-10-13 13:03:37,773 [wrapper] Test setup, not cleaning
[2025-10-13 09:03:38] 2025-10-13 13:03:37,775 [wrapper] apfmon messages muted
[2025-10-13 09:03:38] 2025-10-13 13:03:37,780 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:03:38] 2025-10-13 13:03:37,804 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:03:38]  *** Error codes and diagnostics ***
[2025-10-13 09:03:38]     "exeErrorCode": 0,
[2025-10-13 09:03:38]     "exeErrorDiag": "",
[2025-10-13 09:03:38]     "pilotErrorCode": 0,
[2025-10-13 09:03:38]     "pilotErrorDiag": "",
[2025-10-13 09:03:38]  *** Listing of results directory ***
[2025-10-13 09:03:38] total 420544
[2025-10-13 09:03:38] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 19:11 pilot3.tar.gz
[2025-10-13 09:03:38] -rwx------. 1 boincer umatlas     36292 Oct 12 19:41 runpilot2-wrapper.sh
[2025-10-13 09:03:38] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:41 queuedata.json
[2025-10-13 09:03:38] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:03:38] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:04 run_atlas
[2025-10-13 09:03:38] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:04 job.xml
[2025-10-13 09:03:38] -rw-r--r--. 2 boincer umatlas 222468087 Oct 13 00:04 EVNT.46676267._004665.pool.root.1
[2025-10-13 09:03:38] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:04 start_atlas.sh
[2025-10-13 09:03:38] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:04 shared
[2025-10-13 09:03:38] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 00:04 input.tar.gz
[2025-10-13 09:03:38] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:04 boinc_lockfile
[2025-10-13 09:03:38] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:04 pandaJob.out
[2025-10-13 09:03:38] -rw-------. 1 boincer umatlas    974373 Oct 13 00:05 agis_schedconf.cvmfs.json
[2025-10-13 09:03:38] drwx------. 5 boincer umatlas      4096 Oct 13 00:05 pilot3
[2025-10-13 09:03:38] -rw-r--r--. 1 boincer umatlas      6934 Oct 13 09:01 init_data.xml
[2025-10-13 09:03:38] -rw-------. 1 boincer umatlas 195088850 Oct 13 09:02 HITS.46676269._092411.pool.root.1
[2025-10-13 09:03:38] -rw-r--r--. 1 boincer umatlas       531 Oct 13 09:02 boinc_task_state.xml
[2025-10-13 09:03:38] -rw-------. 1 boincer umatlas      1059 Oct 13 09:03 memory_monitor_summary.json
[2025-10-13 09:03:38] -rw-------. 1 boincer umatlas   1560580 Oct 13 09:03 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:03:38] -rw-------. 1 boincer umatlas    692411 Oct 13 09:03 log.46676269._092411.job.log.tgz.1
[2025-10-13 09:03:38] -rw-------. 1 boincer umatlas      7802 Oct 13 09:03 heartbeat.json
[2025-10-13 09:03:38] -rw-------. 1 boincer umatlas        95 Oct 13 09:03 pilot_heartbeat.json
[2025-10-13 09:03:38] -rw-r--r--. 1 boincer umatlas        28 Oct 13 09:03 wrapper_checkpoint.txt
[2025-10-13 09:03:38] -rw-------. 1 boincer umatlas      4738 Oct 13 09:03 pilotlog.txt
[2025-10-13 09:03:38] -rw-------. 1 boincer umatlas   3898008 Oct 13 09:03 log.46676269._092411.job.log.1
[2025-10-13 09:03:38] -rw-------. 1 boincer umatlas       357 Oct 13 09:03 output.list
[2025-10-13 09:03:38] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 09:03 boinc_mmap_file
[2025-10-13 09:03:38] -rw-r--r--. 1 boincer umatlas       620 Oct 13 09:03 runtime_log
[2025-10-13 09:03:38] -rw-------. 1 boincer umatlas   4608000 Oct 13 09:03 result.tar.gz
[2025-10-13 09:03:38] -rw-------. 1 boincer umatlas       660 Oct 13 09:03 uTrNDmwrKS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmc4lNDmuRDuIn.diag
[2025-10-13 09:03:38] -rw-r--r--. 1 boincer umatlas      8699 Oct 13 09:03 runtime_log.err
[2025-10-13 09:03:38] -rw-r--r--. 1 boincer umatlas     21102 Oct 13 09:03 stderr.txt
[2025-10-13 09:03:38] HITS file was successfully produced:
[2025-10-13 09:03:38] -rw-------. 1 boincer umatlas 195088850 Oct 13 09:02 shared/HITS.pool.root.1
[2025-10-13 09:03:38]  *** Contents of shared directory: ***
[2025-10-13 09:03:38] total 412856
[2025-10-13 09:03:38] -rw-r--r--. 2 boincer umatlas 222468087 Oct 13 00:04 ATLAS.root_0
[2025-10-13 09:03:38] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:04 start_atlas.sh
[2025-10-13 09:03:38] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 00:04 input.tar.gz
[2025-10-13 09:03:38] -rw-------. 1 boincer umatlas 195088850 Oct 13 09:02 HITS.pool.root.1
[2025-10-13 09:03:38] -rw-------. 1 boincer umatlas   4608000 Oct 13 09:03 result.tar.gz
09:03:39 (2518469): run_atlas exited; CPU time 36137.516012
09:03:39 (2518469): called boinc_finish(0)

</stderr_txt>
]]>

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