Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:55 (1118121): wrapper (7.7.26015): starting
00:02:55 (1118121): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:02:55] Arguments: --nthreads 12
[2025-10-13 00:02:55] Threads: 12
[2025-10-13 00:02:55] Checking for CVMFS
[2025-10-13 00:02:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:02:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:02:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:02:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:02:58] 2.13.2.0 4520 38245 209500 151647 0 26 32815818 39288833 10065 16776704 0 47263530 99.663 41526448 38742 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:02:58] CVMFS is ok
[2025-10-13 00:02:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:02:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:02:58] Further information can be found at the LHC@home message board.
[2025-10-13 00:02:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:02:58] Checking for apptainer binary...
[2025-10-13 00:02:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:02:58] Running /usr/bin/apptainer --version
[2025-10-13 00:02:58] apptainer version 1.4.3-1.el9
[2025-10-13 00:02:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:02:59] c-210-5.aglt2.org
[2025-10-13 00:02:59] apptainer works
[2025-10-13 00:02:59] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:02:59] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:02:59] Starting ATLAS job with PandaID=6840962037
[2025-10-13 00:02:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:51:52]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:51:52] 2025-10-13 09:26:18,060 | INFO     | -- intersect: -21857282224.98069
[2025-10-13 05:51:52] 2025-10-13 09:26:18,060 | INFO     | intersect: -21857282224.98069
[2025-10-13 05:51:52] 2025-10-13 09:26:18,061 | INFO     | chi2: 3.691064632905946
[2025-10-13 05:51:52] 2025-10-13 09:26:18,061 | INFO     | sum of square deviations: 9059513421.698034
[2025-10-13 05:51:52] 2025-10-13 09:26:18,064 | INFO     | sum of deviations: 115942752753.81161
[2025-10-13 05:51:52] 2025-10-13 09:26:18,064 | INFO     | mean x: 1760337808.8084416
[2025-10-13 05:51:52] 2025-10-13 09:26:18,064 | INFO     | mean y: 2652441.149350649
[2025-10-13 05:51:52] 2025-10-13 09:26:18,065 | INFO     | -- intersect: -22525975955.27608
[2025-10-13 05:51:52] 2025-10-13 09:26:18,065 | INFO     | intersect: -22525975955.27608
[2025-10-13 05:51:52] 2025-10-13 09:26:18,065 | INFO     | chi2: 3.6929420442979066
[2025-10-13 05:51:52] 2025-10-13 09:26:18,065 | INFO     | current chi2=3.6929420442979066 (change=-0.050863682397301525 %)
[2025-10-13 05:51:52] 2025-10-13 09:26:18,066 | INFO     | right removable region: 307
[2025-10-13 05:51:52] 2025-10-13 09:26:18,066 | INFO     | sum of square deviations: 9059169656.51943
[2025-10-13 05:51:52] 2025-10-13 09:26:18,069 | INFO     | sum of deviations: 25803580440.077908
[2025-10-13 05:51:52] 2025-10-13 09:26:18,069 | INFO     | mean x: 1760338113.8441558
[2025-10-13 05:51:52] 2025-10-13 09:26:18,069 | INFO     | mean y: 2684471.8766233767
[2025-10-13 05:51:52] 2025-10-13 09:26:18,069 | INFO     | -- intersect: -5011354103.902121
[2025-10-13 05:51:52] 2025-10-13 09:26:18,069 | INFO     | intersect: -5011354103.902121
[2025-10-13 05:51:52] 2025-10-13 09:26:18,070 | INFO     | chi2: 0.7566771474556074
[2025-10-13 05:51:52] 2025-10-13 09:26:18,070 | INFO     | current chi2=0.7566771474556074 (change=79.49975893920119 %)
[2025-10-13 05:51:52] 2025-10-13 09:26:18,070 | INFO     | sum of square deviations: 8624838093.5908
[2025-10-13 05:51:52] 2025-10-13 09:26:18,073 | INFO     | sum of deviations: -14534372296.442242
[2025-10-13 05:51:52] 2025-10-13 09:26:18,073 | INFO     | mean x: 1760338266.3828382
[2025-10-13 05:51:52] 2025-10-13 09:26:18,073 | INFO     | mean y: 2698630.607260726
[2025-10-13 05:51:52] 2025-10-13 09:26:18,073 | INFO     | -- intersect: 2969178865.2095375
[2025-10-13 05:51:52] 2025-10-13 09:26:18,073 | INFO     | intersect: 2969178865.2095375
[2025-10-13 05:51:52] 2025-10-13 09:26:18,074 | INFO     | chi2: 0.2225788357685693
[2025-10-13 05:51:52] 2025-10-13 09:26:18,074 | INFO     | current chi2=0.2225788357685693 (change=70.5847022713703 %)
[2025-10-13 05:51:52] 2025-10-13 09:26:18,075 | INFO     | sum of square deviations: 8204656379.731532
[2025-10-13 05:51:52] 2025-10-13 09:26:18,077 | INFO     | sum of deviations: -33754858317.25504
[2025-10-13 05:51:52] 2025-10-13 09:26:18,077 | INFO     | mean x: 1760338418.9127517
[2025-10-13 05:51:52] 2025-10-13 09:26:18,078 | INFO     | mean y: 2705575.067114094
[2025-10-13 05:51:52] 2025-10-13 09:26:18,078 | INFO     | -- intersect: 7244931351.591953
[2025-10-13 05:51:52] 2025-10-13 09:26:18,078 | INFO     | intersect: 7244931351.591953
[2025-10-13 05:51:52] 2025-10-13 09:26:18,079 | INFO     | chi2: 0.0504500677086506
[2025-10-13 05:51:52] 2025-10-13 09:26:18,079 | INFO     | current chi2=0.0504500677086506 (change=77.3338432944689 %)
[2025-10-13 05:51:52] 2025-10-13 09:26:18,079 | INFO     | sum of square deviations: 7798334536.320864
[2025-10-13 05:51:52] 2025-10-13 09:26:18,082 | INFO     | sum of deviations: -32272214203.30033
[2025-10-13 05:51:52] 2025-10-13 09:26:18,082 | INFO     | mean x: 1760338571.443686
[2025-10-13 05:51:52] 2025-10-13 09:26:18,082 | INFO     | mean y: 2705015.6484641638
[2025-10-13 05:51:52] 2025-10-13 09:26:18,082 | INFO     | -- intersect: 7287596832.40354
[2025-10-13 05:51:52] 2025-10-13 09:26:18,083 | INFO     | intersect: 7287596832.40354
[2025-10-13 05:51:52] 2025-10-13 09:26:18,083 | INFO     | chi2: 0.05022830807421681
[2025-10-13 05:51:52] 2025-10-13 09:26:18,083 | INFO     | current chi2=0.05022830807421681 (change=0.4395626101325537 %)
[2025-10-13 05:51:52] 2025-10-13 09:26:18,083 | INFO     | left removable region: 40
[2025-10-13 05:51:52] 2025-10-13 09:26:18,084 | INFO     | sum of square deviations: 5901219158.119853
[2025-10-13 05:51:52] 2025-10-13 09:26:18,086 | INFO     | sum of deviations: -17039694253.23221
[2025-10-13 05:51:52] 2025-10-13 09:26:18,086 | INFO     | mean x: 1760338998.400749
[2025-10-13 05:51:52] 2025-10-13 09:26:18,087 | INFO     | mean y: 2698780.161048689
[2025-10-13 05:51:52] 2025-10-13 09:26:18,087 | INFO     | -- intersect: 5085654947.534859
[2025-10-13 05:51:52] 2025-10-13 09:26:18,087 | INFO     | intersect: 5085654947.534859
[2025-10-13 05:51:52] 2025-10-13 09:26:18,087 | INFO     | chi2: 0.04026180770770089
[2025-10-13 05:51:52] 2025-10-13 09:26:18,088 | INFO     | -- intersect: 5085654947.534859
[2025-10-13 05:51:52] 2025-10-13 09:26:18,088 | INFO     | current memory leak: -2.89 B/s (using 267 data points, chi2=0.04)
[2025-10-13 05:51:52] 2025-10-13 09:26:18,088 | INFO     | could have reported an average CPU frequency of 2600 MHz (14 samples)
[2025-10-13 05:51:52] 2025-10-13 09:26:18,089 | INFO     | ..............................
[2025-10-13 05:51:52] 2025-10-13 09:26:18,089 | INFO     | . Timing measurements:
[2025-10-13 05:51:52] 2025-10-13 09:26:18,089 | INFO     | . get job = 0 s
[2025-10-13 05:51:52] 2025-10-13 09:26:18,089 | INFO     | . initial setup = 4 s
[2025-10-13 05:51:52] 2025-10-13 09:26:18,089 | INFO     | . payload setup = 46 s
[2025-10-13 05:51:52] 2025-10-13 09:26:18,089 | INFO     | . stage-in = 0 s
[2025-10-13 05:51:52] 2025-10-13 09:26:18,089 | INFO     | . payload execution = 19135 s
[2025-10-13 05:51:52] 2025-10-13 09:26:18,089 | INFO     | . stage-out = 7 s
[2025-10-13 05:51:52] 2025-10-13 09:26:18,090 | INFO     | . log creation = 1 s
[2025-10-13 05:51:52] 2025-10-13 09:26:18,090 | INFO     | ..............................
[2025-10-13 05:51:52] 2025-10-13 09:26:18,637 | INFO     | 
[2025-10-13 05:51:52] 2025-10-13 09:26:18,639 | INFO     | job summary report
[2025-10-13 05:51:52] 2025-10-13 09:26:18,639 | INFO     | --------------------------------------------------
[2025-10-13 05:51:52] 2025-10-13 09:26:18,639 | INFO     | PanDA job id: 6840962037
[2025-10-13 05:51:52] 2025-10-13 09:26:18,639 | INFO     | task id: 46676269
[2025-10-13 05:51:52] 2025-10-13 09:26:18,639 | INFO     | errors: (none)
[2025-10-13 05:51:52] 2025-10-13 09:26:18,640 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:51:52] 2025-10-13 09:26:18,640 | INFO     | pilot state: finished 
[2025-10-13 05:51:52] 2025-10-13 09:26:18,640 | INFO     | transexitcode: 0
[2025-10-13 05:51:52] 2025-10-13 09:26:18,640 | INFO     | exeerrorcode: 0
[2025-10-13 05:51:52] 2025-10-13 09:26:18,640 | INFO     | exeerrordiag: 
[2025-10-13 05:51:52] 2025-10-13 09:26:18,640 | INFO     | exitcode: 0
[2025-10-13 05:51:52] 2025-10-13 09:26:18,640 | INFO     | exitmsg: OK
[2025-10-13 05:51:52] 2025-10-13 09:26:18,640 | INFO     | cpuconsumptiontime: 50129 s
[2025-10-13 05:51:52] 2025-10-13 09:26:18,640 | INFO     | nevents: 400
[2025-10-13 05:51:52] 2025-10-13 09:26:18,640 | INFO     | neventsw: 0
[2025-10-13 05:51:52] 2025-10-13 09:26:18,640 | INFO     | pid: 1130957
[2025-10-13 05:51:52] 2025-10-13 09:26:18,641 | INFO     | pgrp: 1130957
[2025-10-13 05:51:52] 2025-10-13 09:26:18,641 | INFO     | corecount: 12
[2025-10-13 05:51:52] 2025-10-13 09:26:18,641 | INFO     | event service: False
[2025-10-13 05:51:52] 2025-10-13 09:26:18,641 | INFO     | sizes: {0: 2348630, 1: 2348686, 2: 2348714, 3: 2348941, 15: 2348941, 26: 2348969, 37: 2349125, 40: 2349415, 48: 2349443, 19188: 2382049, 19189: 2382048, 19197: 239
[2025-10-13 05:51:52] 2025-10-13 09:26:18,641 | INFO     | --------------------------------------------------
[2025-10-13 05:51:52] 2025-10-13 09:26:18,641 | INFO     | 
[2025-10-13 05:51:52] 2025-10-13 09:26:18,641 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 05:51:52] 2025-10-13 09:26:18,996 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:51:52] 2025-10-13 09:26:18,996 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:51:52] 2025-10-13 09:26:18,997 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:51:52] 2025-10-13 09:26:18,997 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:51:52] 2025-10-13 09:26:18,997 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:51:52] 2025-10-13 09:26:18,997 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:51:52] 2025-10-13 09:26:18,997 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:51:52] 2025-10-13 09:26:18,997 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:51:52] 2025-10-13 09:26:18,997 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:51:52] 2025-10-13 09:26:18,997 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:51:52] 2025-10-13 09:26:18,997 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:51:52] 2025-10-13 09:26:18,997 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:51:52] 2025-10-13 09:26:18,998 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:51:52] 2025-10-13 09:26:18,998 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:51:52] 2025-10-13 09:26:18,998 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:51:52] 2025-10-13 09:26:18,998 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:51:52] 2025-10-13 09:26:18,998 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:51:52] 2025-10-13 09:26:18,998 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:51:52] 2025-10-13 09:26:18,998 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:51:52] 2025-10-13 09:26:18,998 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:51:52] 2025-10-13 09:26:18,998 | INFO     | job 6840962037 has completed (purged errors)
[2025-10-13 05:51:52] 2025-10-13 09:26:18,999 | INFO     | overall cleanup function is called
[2025-10-13 05:51:52] 2025-10-13 09:26:20,073 | INFO     | --- collectZombieJob: --- 10, [1130957]
[2025-10-13 05:51:52] 2025-10-13 09:26:20,074 | INFO     | zombie collector waiting for pid 1130957
[2025-10-13 05:51:52] 2025-10-13 09:26:20,074 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:51:52] 2025-10-13 09:26:20,074 | INFO     | collected zombie processes
[2025-10-13 05:51:52] 2025-10-13 09:26:20,074 | INFO     | will attempt to kill all subprocesses of pid=1130957
[2025-10-13 05:51:52] 2025-10-13 09:26:20,476 | INFO     | process IDs to be killed: [1130957] (in reverse order)
[2025-10-13 05:51:52] 2025-10-13 09:26:20,559 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:51:52] 2025-10-13 09:26:20,559 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:51:52] 2025-10-13 09:26:20,568 | INFO     | did not find any defunct processes belonging to 1130957
[2025-10-13 05:51:52] 2025-10-13 09:26:20,577 | INFO     | did not find any defunct processes belonging to 1130957
[2025-10-13 05:51:52] 2025-10-13 09:26:20,578 | INFO     | ready for new job
[2025-10-13 05:51:52] 2025-10-13 09:26:20,653 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:51:52] 2025-10-13 09:26:20,656 | INFO     | ***************************************
[2025-10-13 05:51:52] 2025-10-13 09:26:20,657 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:51:52] 2025-10-13 09:26:20,657 | INFO     | ***************************************
[2025-10-13 05:51:52] 2025-10-13 09:26:20,657 | INFO     | 
[2025-10-13 05:51:52] 2025-10-13 09:26:20,659 | INFO     | architecture information:
[2025-10-13 05:51:52] 2025-10-13 09:26:20,659 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:51:52] 2025-10-13 09:26:20,757 | INFO     | cat /etc/os-release:
[2025-10-13 05:51:52] NAME="CentOS Linux"
[2025-10-13 05:51:52] VERSION="7 (Core)"
[2025-10-13 05:51:52] ID="centos"
[2025-10-13 05:51:52] ID_LIKE="rhel fedora"
[2025-10-13 05:51:52] VERSION_ID="7"
[2025-10-13 05:51:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:51:52] ANSI_COLOR="0;31"
[2025-10-13 05:51:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:51:52] HOME_URL="https://www.centos.org/"
[2025-10-13 05:51:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:51:52] 
[2025-10-13 05:51:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:51:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:51:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:51:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:51:52] 
[2025-10-13 05:51:52] 2025-10-13 09:26:20,758 | INFO     | ***************************************
[2025-10-13 05:51:52] 2025-10-13 09:26:21,277 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 05:51:52] 2025-10-13 09:26:21,562 | INFO     | sufficient remaining disk space (52969865216 B)
[2025-10-13 05:51:52] 2025-10-13 09:26:21,562 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:51:52] 2025-10-13 09:26:21,562 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:51:52] 2025-10-13 09:26:21,563 | INFO     | update_server=False
[2025-10-13 05:51:52] 2025-10-13 09:26:21,563 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:51:52] 2025-10-13 09:26:21,564 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:51:52] 2025-10-13 09:26:22,362 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:51:52] 2025-10-13 09:26:22,362 | INFO     | aborting loop
[2025-10-13 05:51:52] 2025-10-13 09:26:22,385 | INFO     | all data control threads have been joined
[2025-10-13 05:51:52] 2025-10-13 09:26:22,605 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:51:52] 2025-10-13 09:26:22,846 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:51:52] 2025-10-13 09:26:22,913 | INFO     | all payload control threads have been joined
[2025-10-13 05:51:52] 2025-10-13 09:26:22,929 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:51:52] 2025-10-13 09:26:22,937 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:51:52] 2025-10-13 09:26:23,103 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:51:52] 2025-10-13 09:26:23,171 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:51:52] 2025-10-13 09:26:23,244 | INFO     | all job control threads have been joined
[2025-10-13 05:51:52] 2025-10-13 09:26:23,378 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:51:52] 2025-10-13 09:26:23,385 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:51:52] 2025-10-13 09:26:23,388 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:51:52] 2025-10-13 09:26:23,409 | INFO     | [data] control thread has finished
[2025-10-13 05:51:52] 2025-10-13 09:26:23,571 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:51:52] 2025-10-13 09:26:23,628 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:51:52] 2025-10-13 09:26:23,677 | INFO     | [job] validate thread has finished
[2025-10-13 05:51:52] 2025-10-13 09:26:23,852 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:51:52] 2025-10-13 09:26:23,919 | INFO     | [payload] control thread has finished
[2025-10-13 05:51:52] 2025-10-13 09:26:24,275 | INFO     | [job] control thread has finished
[2025-10-13 05:51:52] 2025-10-13 09:26:24,391 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:51:52] 2025-10-13 09:26:26,945 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:51:52] 2025-10-13 09:26:52,342 | INFO     | PID=1123603 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:51:52] 2025-10-13 09:26:52,343 | INFO     | .. there are 7 such processes running
[2025-10-13 05:51:52] 2025-10-13 09:26:52,344 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:51:52] 2025-10-13 09:26:52,344 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:51:52] 2025-10-13 09:26:52,344 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:51:52] 2025-10-13 09:26:59,322 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:51:52] 2025-10-13 09:27:00,148 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140510038058816)>', '<ExcThread(monitor, started 140509695690496)>']
[2025-10-13 05:51:52] 2025-10-13 09:27:00,391 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:51:52] 2025-10-13 09:27:00,391 | INFO     | [monitor] control thread has ended
[2025-10-13 05:51:52] 2025-10-13 09:27:05,174 | INFO     | all workflow threads have been joined
[2025-10-13 05:51:52] 2025-10-13 09:27:05,174 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:51:52] 2025-10-13 09:27:05,174 | INFO     | traces error code: 0
[2025-10-13 05:51:52] 2025-10-13 09:27:05,175 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:51:52] 2025-10-13 09:27:07,181 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:51:52] 2025-10-13 09:27:07,230 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:51:52] 2025-10-13 09:27:07,272 [wrapper] pilotpid: 1123603
[2025-10-13 05:51:52] 2025-10-13 09:27:07,330 [wrapper] Pilot exit status: 0
[2025-10-13 05:51:52] 2025-10-13 09:27:07,515 [wrapper] pandaids: 6840962037
[2025-10-13 05:51:52] 2025-10-13 09:27:07,790 [wrapper] cleanup supervisor_pilot 1557887 1123604
[2025-10-13 05:51:52] 2025-10-13 09:27:07,810 [wrapper] Test setup, not cleaning
[2025-10-13 05:51:52] 2025-10-13 09:27:07,835 [wrapper] apfmon messages muted
[2025-10-13 05:51:52] 2025-10-13 09:27:07,866 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:51:52] 2025-10-13 09:27:07,890 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:51:52]  *** Error codes and diagnostics ***
[2025-10-13 05:51:52]     "exeErrorCode": 0,
[2025-10-13 05:51:52]     "exeErrorDiag": "",
[2025-10-13 05:51:52]     "pilotErrorCode": 0,
[2025-10-13 05:51:52]     "pilotErrorDiag": "",
[2025-10-13 05:51:52]  *** Listing of results directory ***
[2025-10-13 05:51:52] total 417488
[2025-10-13 05:51:52] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 19:11 pilot3.tar.gz
[2025-10-13 05:51:52] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:17 queuedata.json
[2025-10-13 05:51:52] -rwx------. 1 boincer umatlas     36292 Oct 12 19:18 runpilot2-wrapper.sh
[2025-10-13 05:51:52] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:51:52] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:02 run_atlas
[2025-10-13 05:51:52] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:02 job.xml
[2025-10-13 05:51:52] -rw-r--r--. 2 boincer umatlas 222205582 Oct 13 00:02 EVNT.46676267._004651.pool.root.1
[2025-10-13 05:51:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:02 start_atlas.sh
[2025-10-13 05:51:52] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:02 shared
[2025-10-13 05:51:52] -rw-r--r--. 2 boincer umatlas    569682 Oct 13 00:02 input.tar.gz
[2025-10-13 05:51:52] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:02 boinc_lockfile
[2025-10-13 05:51:52] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:02 pandaJob.out
[2025-10-13 05:51:52] -rw-------. 1 boincer umatlas    974373 Oct 13 00:04 agis_schedconf.cvmfs.json
[2025-10-13 05:51:52] drwx------. 5 boincer umatlas      4096 Oct 13 00:04 pilot3
[2025-10-13 05:51:52] -rw-------. 1 boincer umatlas 195525995 Oct 13 05:24 HITS.46676269._092024.pool.root.1
[2025-10-13 05:51:52] -rw-r--r--. 1 boincer umatlas       530 Oct 13 05:25 boinc_task_state.xml
[2025-10-13 05:51:52] -rw-------. 1 boincer umatlas      1045 Oct 13 05:25 memory_monitor_summary.json
[2025-10-13 05:51:52] -rw-------. 1 boincer umatlas   1560580 Oct 13 05:25 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:51:52] -rw-------. 1 boincer umatlas    565448 Oct 13 05:25 log.46676269._092024.job.log.tgz.1
[2025-10-13 05:51:52] -rw-------. 1 boincer umatlas      7833 Oct 13 05:26 heartbeat.json
[2025-10-13 05:51:52] -rw-------. 1 boincer umatlas        95 Oct 13 05:26 pilot_heartbeat.json
[2025-10-13 05:51:52] -rw-------. 1 boincer umatlas      4823 Oct 13 05:27 pilotlog.txt
[2025-10-13 05:51:52] -rw-------. 1 boincer umatlas   2381254 Oct 13 05:27 log.46676269._092024.job.log.1
[2025-10-13 05:51:52] -rw-------. 1 boincer umatlas       357 Oct 13 05:27 output.list
[2025-10-13 05:51:52] -rw-r--r--. 1 boincer umatlas       620 Oct 13 05:27 runtime_log
[2025-10-13 05:51:52] -rw-------. 1 boincer umatlas   2969600 Oct 13 05:27 result.tar.gz
[2025-10-13 05:51:52] -rw-------. 1 boincer umatlas       657 Oct 13 05:27 tPtMDmiVKS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmG1lNDmXainOm.diag
[2025-10-13 05:51:52] -rw-r--r--. 1 boincer umatlas      8701 Oct 13 05:27 runtime_log.err
[2025-10-13 05:51:52] -rw-r--r--. 1 boincer umatlas      6659 Oct 13 05:48 init_data.xml
[2025-10-13 05:51:52] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 05:51 boinc_mmap_file
[2025-10-13 05:51:52] -rw-r--r--. 1 boincer umatlas      2144 Oct 13 05:51 stderr.txt
[2025-10-13 05:51:52] -rw-r--r--. 1 boincer umatlas        27 Oct 13 05:51 wrapper_checkpoint.txt
[2025-10-13 05:51:52] HITS file was successfully produced:
[2025-10-13 05:51:52] -rw-------. 1 boincer umatlas 195525995 Oct 13 05:24 shared/HITS.pool.root.1
[2025-10-13 05:51:52]  *** Contents of shared directory: ***
[2025-10-13 05:51:52] total 411424
[2025-10-13 05:51:52] -rw-r--r--. 2 boincer umatlas 222205582 Oct 13 00:02 ATLAS.root_0
[2025-10-13 05:51:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:02 start_atlas.sh
[2025-10-13 05:51:52] -rw-r--r--. 2 boincer umatlas    569682 Oct 13 00:02 input.tar.gz
[2025-10-13 05:51:52] -rw-------. 1 boincer umatlas 195525995 Oct 13 05:24 HITS.pool.root.1
[2025-10-13 05:51:52] -rw-------. 1 boincer umatlas   2969600 Oct 13 05:27 result.tar.gz
05:51:54 (1118121): run_atlas exited; CPU time 50367.951619
05:51:54 (1118121): called boinc_finish(0)

</stderr_txt>
]]>

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