Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:11 (2493658): wrapper (7.7.26015): starting
00:04:11 (2493658): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 00:04:11] Arguments: --nthreads 8
[2025-10-13 00:04:11] Threads: 8
[2025-10-13 00:04:11] Checking for CVMFS
[2025-10-13 00:04:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:04:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:04:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:04:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:04:13] 2.13.2.0 2038924 69504 179576 151647 2 592 31421800 32503809 54015 16776704 0 457723022 99.750 311571247 34567 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:04:13] CVMFS is ok
[2025-10-13 00:04:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:04:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:04:13] Further information can be found at the LHC@home message board.
[2025-10-13 00:04:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:04:13] Checking for apptainer binary...
[2025-10-13 00:04:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:04:13] Running /usr/bin/apptainer --version
[2025-10-13 00:04:13] apptainer version 1.4.3-1.el9
[2025-10-13 00:04:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:04:14] c8-7-1.aglt2.org
[2025-10-13 00:04:14] apptainer works
[2025-10-13 00:04:14] Set ATHENA_PROC_NUMBER=8
[2025-10-13 00:04:14] Set ATHENA_CORE_NUMBER=8
[2025-10-13 00:04:14] Starting ATLAS job with PandaID=6840969096
[2025-10-13 00:04:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 02:38:21]  *** The last 200 lines of the pilot log: ***
[2025-10-13 02:38:21] 2025-10-13 06:37:24,187 | INFO     | monitor loop #497: job 0:6840969096 is in state 'finished'
[2025-10-13 02:38:21] 2025-10-13 06:37:24,187 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 02:38:21] 2025-10-13 06:37:25,090 | INFO     | time since job start (9088s) is within the limit (172800.0s)
[2025-10-13 02:38:21] 2025-10-13 06:37:26,189 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 02:38:21] 2025-10-13 06:37:26,204 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3748.7702968750004
[2025-10-13 02:38:21] 2025-10-13 06:37:26,245 | INFO     | using path: /tmp/boinchome/slots/12/PanDA_Pilot-6840969096/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 02:38:21] 2025-10-13 06:37:26,246 | INFO     | extracted standard info from prmon json
[2025-10-13 02:38:21] 2025-10-13 06:37:26,246 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 02:38:21] 2025-10-13 06:37:26,246 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 02:38:21] 2025-10-13 06:37:26,246 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 02:38:21] 2025-10-13 06:37:26,246 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 02:38:21] 2025-10-13 06:37:26,248 | INFO     | fitting pss+swap vs Time
[2025-10-13 02:38:21] 2025-10-13 06:37:26,248 | INFO     | sum of square deviations: 945237741.9724134
[2025-10-13 02:38:21] 2025-10-13 06:37:26,248 | INFO     | sum of deviations: 33675013755.931015
[2025-10-13 02:38:21] 2025-10-13 06:37:26,248 | INFO     | mean x: 1760332972.1862068
[2025-10-13 02:38:21] 2025-10-13 06:37:26,248 | INFO     | mean y: 2356530.9655172415
[2025-10-13 02:38:21] 2025-10-13 06:37:26,248 | INFO     | -- intersect: -62711217442.17308
[2025-10-13 02:38:21] 2025-10-13 06:37:26,249 | INFO     | intersect: -62711217442.17308
[2025-10-13 02:38:21] 2025-10-13 06:37:26,249 | INFO     | chi2: 3.7787692288764805
[2025-10-13 02:38:21] 2025-10-13 06:37:26,249 | INFO     | sum of square deviations: 850788391.7928559
[2025-10-13 02:38:21] 2025-10-13 06:37:26,249 | INFO     | sum of deviations: 41846162058.014305
[2025-10-13 02:38:21] 2025-10-13 06:37:26,249 | INFO     | mean x: 1760332819.692857
[2025-10-13 02:38:21] 2025-10-13 06:37:26,249 | INFO     | mean y: 2369284.814285714
[2025-10-13 02:38:21] 2025-10-13 06:37:26,249 | INFO     | -- intersect: -86579879790.86842
[2025-10-13 02:38:21] 2025-10-13 06:37:26,249 | INFO     | intersect: -86579879790.86842
[2025-10-13 02:38:21] 2025-10-13 06:37:26,249 | INFO     | chi2: 2.9684565469184916
[2025-10-13 02:38:21] 2025-10-13 06:37:26,250 | INFO     | current chi2=2.9684565469184916 (change=21.44382556536575 %)
[2025-10-13 02:38:21] 2025-10-13 06:37:26,250 | INFO     | right removable region: 139
[2025-10-13 02:38:21] 2025-10-13 06:37:26,250 | INFO     | sum of square deviations: 850771921.7928559
[2025-10-13 02:38:21] 2025-10-13 06:37:26,250 | INFO     | sum of deviations: -2160855416.292857
[2025-10-13 02:38:21] 2025-10-13 06:37:26,250 | INFO     | mean x: 1760333124.692857
[2025-10-13 02:38:21] 2025-10-13 06:37:26,250 | INFO     | mean y: 2413980.807142857
[2025-10-13 02:38:21] 2025-10-13 06:37:26,250 | INFO     | -- intersect: 4473442313.472824
[2025-10-13 02:38:21] 2025-10-13 06:37:26,250 | INFO     | intersect: 4473442313.472824
[2025-10-13 02:38:21] 2025-10-13 06:37:26,250 | INFO     | chi2: 0.9541841886751911
[2025-10-13 02:38:21] 2025-10-13 06:37:26,250 | INFO     | current chi2=0.9541841886751911 (change=74.7488102373774 %)
[2025-10-13 02:38:21] 2025-10-13 06:37:26,251 | INFO     | sum of square deviations: 762826512.9925928
[2025-10-13 02:38:21] 2025-10-13 06:37:26,251 | INFO     | sum of deviations: -8075556053.207407
[2025-10-13 02:38:21] 2025-10-13 06:37:26,251 | INFO     | mean x: 1760333277.1925926
[2025-10-13 02:38:21] 2025-10-13 06:37:26,251 | INFO     | mean y: 2424130.3925925926
[2025-10-13 02:38:21] 2025-10-13 06:37:26,251 | INFO     | -- intersect: 18637945851.480324
[2025-10-13 02:38:21] 2025-10-13 06:37:26,251 | INFO     | intersect: 18637945851.480324
[2025-10-13 02:38:21] 2025-10-13 06:37:26,251 | INFO     | chi2: 0.8678477264131247
[2025-10-13 02:38:21] 2025-10-13 06:37:26,251 | INFO     | current chi2=0.8678477264131247 (change=9.048196698997673 %)
[2025-10-13 02:38:21] 2025-10-13 06:37:26,251 | INFO     | left removable region: 20
[2025-10-13 02:38:21] 2025-10-13 06:37:26,251 | INFO     | sum of square deviations: 522451985.7478993
[2025-10-13 02:38:21] 2025-10-13 06:37:26,254 | INFO     | sum of deviations: -370311007.06722695
[2025-10-13 02:38:21] 2025-10-13 06:37:26,254 | INFO     | mean x: 1760333399.210084
[2025-10-13 02:38:21] 2025-10-13 06:37:26,254 | INFO     | mean y: 2443093.722689076
[2025-10-13 02:38:21] 2025-10-13 06:37:26,254 | INFO     | -- intersect: 1250157432.2994606
[2025-10-13 02:38:21] 2025-10-13 06:37:26,254 | INFO     | intersect: 1250157432.2994606
[2025-10-13 02:38:21] 2025-10-13 06:37:26,254 | INFO     | chi2: 0.0013239759578054032
[2025-10-13 02:38:21] 2025-10-13 06:37:26,254 | INFO     | -- intersect: 1250157432.2994606
[2025-10-13 02:38:21] 2025-10-13 06:37:26,254 | INFO     | current memory leak: -0.71 B/s (using 119 data points, chi2=0.00)
[2025-10-13 02:38:21] 2025-10-13 06:37:26,254 | INFO     | could have reported an average CPU frequency of 3792 MHz (8 samples)
[2025-10-13 02:38:21] 2025-10-13 06:37:26,255 | INFO     | ..............................
[2025-10-13 02:38:21] 2025-10-13 06:37:26,255 | INFO     | . Timing measurements:
[2025-10-13 02:38:21] 2025-10-13 06:37:26,255 | INFO     | . get job = 0 s
[2025-10-13 02:38:21] 2025-10-13 06:37:26,255 | INFO     | . initial setup = 5 s
[2025-10-13 02:38:21] 2025-10-13 06:37:26,255 | INFO     | . payload setup = 68 s
[2025-10-13 02:38:21] 2025-10-13 06:37:26,255 | INFO     | . stage-in = 0 s
[2025-10-13 02:38:21] 2025-10-13 06:37:26,255 | INFO     | . payload execution = 8884 s
[2025-10-13 02:38:21] 2025-10-13 06:37:26,255 | INFO     | . stage-out = 2 s
[2025-10-13 02:38:21] 2025-10-13 06:37:26,255 | INFO     | . log creation = 0 s
[2025-10-13 02:38:21] 2025-10-13 06:37:26,255 | INFO     | ..............................
[2025-10-13 02:38:21] 2025-10-13 06:37:26,306 | INFO     | 
[2025-10-13 02:38:21] 2025-10-13 06:37:26,306 | INFO     | job summary report
[2025-10-13 02:38:21] 2025-10-13 06:37:26,306 | INFO     | --------------------------------------------------
[2025-10-13 02:38:21] 2025-10-13 06:37:26,306 | INFO     | PanDA job id: 6840969096
[2025-10-13 02:38:21] 2025-10-13 06:37:26,306 | INFO     | task id: 46676269
[2025-10-13 02:38:21] 2025-10-13 06:37:26,306 | INFO     | errors: (none)
[2025-10-13 02:38:21] 2025-10-13 06:37:26,306 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 02:38:21] 2025-10-13 06:37:26,306 | INFO     | pilot state: finished 
[2025-10-13 02:38:21] 2025-10-13 06:37:26,306 | INFO     | transexitcode: 0
[2025-10-13 02:38:21] 2025-10-13 06:37:26,306 | INFO     | exeerrorcode: 0
[2025-10-13 02:38:21] 2025-10-13 06:37:26,306 | INFO     | exeerrordiag: 
[2025-10-13 02:38:21] 2025-10-13 06:37:26,306 | INFO     | exitcode: 0
[2025-10-13 02:38:21] 2025-10-13 06:37:26,307 | INFO     | exitmsg: OK
[2025-10-13 02:38:21] 2025-10-13 06:37:26,307 | INFO     | cpuconsumptiontime: 24800 s
[2025-10-13 02:38:21] 2025-10-13 06:37:26,307 | INFO     | nevents: 400
[2025-10-13 02:38:21] 2025-10-13 06:37:26,307 | INFO     | neventsw: 0
[2025-10-13 02:38:21] 2025-10-13 06:37:26,307 | INFO     | pid: 2664423
[2025-10-13 02:38:21] 2025-10-13 06:37:26,307 | INFO     | pgrp: 2664423
[2025-10-13 02:38:21] 2025-10-13 06:37:26,307 | INFO     | corecount: 8
[2025-10-13 02:38:21] 2025-10-13 06:37:26,307 | INFO     | event service: False
[2025-10-13 02:38:21] 2025-10-13 06:37:26,307 | INFO     | sizes: {0: 2348637, 1: 2348836, 12: 2348836, 22: 2348864, 33: 2348892, 44: 2348948, 47: 2349366, 55: 2349422, 8957: 2377385, 8958: 2377384, 8961: 2386440, 8962: 23
[2025-10-13 02:38:21] 2025-10-13 06:37:26,307 | INFO     | --------------------------------------------------
[2025-10-13 02:38:21] 2025-10-13 06:37:26,307 | INFO     | 
[2025-10-13 02:38:21] 2025-10-13 06:37:26,307 | INFO     | executing command: ls -lF /tmp/boinchome/slots/12
[2025-10-13 02:38:21] 2025-10-13 06:37:26,417 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 02:38:21] 2025-10-13 06:37:26,417 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 02:38:21] 2025-10-13 06:37:26,417 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 02:38:21] 2025-10-13 06:37:26,418 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 02:38:21] 2025-10-13 06:37:26,418 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 02:38:21] 2025-10-13 06:37:26,418 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 02:38:21] 2025-10-13 06:37:26,418 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 02:38:21] 2025-10-13 06:37:26,418 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 02:38:21] 2025-10-13 06:37:26,418 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 02:38:21] 2025-10-13 06:37:26,418 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 02:38:21] 2025-10-13 06:37:26,418 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 02:38:21] 2025-10-13 06:37:26,418 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 02:38:21] 2025-10-13 06:37:26,418 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 02:38:21] 2025-10-13 06:37:26,418 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 02:38:21] 2025-10-13 06:37:26,418 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 02:38:21] 2025-10-13 06:37:26,418 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 02:38:21] 2025-10-13 06:37:26,418 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 02:38:21] 2025-10-13 06:37:26,418 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 02:38:21] 2025-10-13 06:37:26,418 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 02:38:21] 2025-10-13 06:37:26,418 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 02:38:21] 2025-10-13 06:37:26,418 | INFO     | job 6840969096 has completed (purged errors)
[2025-10-13 02:38:21] 2025-10-13 06:37:26,418 | INFO     | overall cleanup function is called
[2025-10-13 02:38:21] 2025-10-13 06:37:27,441 | INFO     | --- collectZombieJob: --- 10, [2664423]
[2025-10-13 02:38:21] 2025-10-13 06:37:27,441 | INFO     | zombie collector waiting for pid 2664423
[2025-10-13 02:38:21] 2025-10-13 06:37:27,441 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 02:38:21] 2025-10-13 06:37:27,441 | INFO     | collected zombie processes
[2025-10-13 02:38:21] 2025-10-13 06:37:27,441 | INFO     | will attempt to kill all subprocesses of pid=2664423
[2025-10-13 02:38:21] 2025-10-13 06:37:29,386 | INFO     | process IDs to be killed: [2664423] (in reverse order)
[2025-10-13 02:38:21] 2025-10-13 06:37:29,874 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 02:38:21] 2025-10-13 06:37:29,874 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 02:38:21] 2025-10-13 06:37:29,904 | INFO     | did not find any defunct processes belonging to 2664423
[2025-10-13 02:38:21] 2025-10-13 06:37:29,934 | INFO     | did not find any defunct processes belonging to 2664423
[2025-10-13 02:38:21] 2025-10-13 06:37:29,934 | INFO     | ready for new job
[2025-10-13 02:38:21] 2025-10-13 06:37:29,935 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 02:38:21] 2025-10-13 06:37:29,936 | INFO     | ***************************************
[2025-10-13 02:38:21] 2025-10-13 06:37:29,948 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 02:38:21] 2025-10-13 06:37:29,948 | INFO     | ***************************************
[2025-10-13 02:38:21] 2025-10-13 06:37:29,948 | INFO     | 
[2025-10-13 02:38:21] 2025-10-13 06:37:29,975 | INFO     | architecture information:
[2025-10-13 02:38:21] 2025-10-13 06:37:29,984 | INFO     | executing command: cat /etc/os-release
[2025-10-13 02:38:21] 2025-10-13 06:37:30,014 | INFO     | cat /etc/os-release:
[2025-10-13 02:38:21] NAME="CentOS Linux"
[2025-10-13 02:38:21] VERSION="7 (Core)"
[2025-10-13 02:38:21] ID="centos"
[2025-10-13 02:38:21] ID_LIKE="rhel fedora"
[2025-10-13 02:38:21] VERSION_ID="7"
[2025-10-13 02:38:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 02:38:21] ANSI_COLOR="0;31"
[2025-10-13 02:38:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 02:38:21] HOME_URL="https://www.centos.org/"
[2025-10-13 02:38:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 02:38:21] 
[2025-10-13 02:38:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 02:38:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 02:38:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 02:38:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 02:38:21] 
[2025-10-13 02:38:21] 2025-10-13 06:37:30,016 | INFO     | ***************************************
[2025-10-13 02:38:21] 2025-10-13 06:37:30,519 | INFO     | executing command: df -mP /tmp/boinchome/slots/12
[2025-10-13 02:38:21] 2025-10-13 06:37:30,582 | INFO     | sufficient remaining disk space (92218064896 B)
[2025-10-13 02:38:21] 2025-10-13 06:37:30,582 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 02:38:21] 2025-10-13 06:37:30,583 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 02:38:21] 2025-10-13 06:37:30,583 | INFO     | update_server=False
[2025-10-13 02:38:21] 2025-10-13 06:37:30,583 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 02:38:21] 2025-10-13 06:37:30,584 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 02:38:21] 2025-10-13 06:37:30,584 | INFO     | aborting loop
[2025-10-13 02:38:21] 2025-10-13 06:37:30,831 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 02:38:21] 2025-10-13 06:37:31,336 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 02:38:21] 2025-10-13 06:37:31,344 | INFO     | all data control threads have been joined
[2025-10-13 02:38:21] 2025-10-13 06:37:31,589 | INFO     | [job] retrieve thread has finished
[2025-10-13 02:38:21] 2025-10-13 06:37:31,590 | INFO     | [job] job monitor thread has finished
[2025-10-13 02:38:21] 2025-10-13 06:37:31,761 | INFO     | [payload] failed_post thread has finished
[2025-10-13 02:38:21] 2025-10-13 06:37:31,767 | INFO     | all payload control threads have been joined
[2025-10-13 02:38:21] 2025-10-13 06:37:31,914 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 02:38:21] 2025-10-13 06:37:32,005 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 02:38:21] 2025-10-13 06:37:32,093 | INFO     | all job control threads have been joined
[2025-10-13 02:38:21] 2025-10-13 06:37:32,310 | INFO     | [job] validate thread has finished
[2025-10-13 02:38:21] 2025-10-13 06:37:32,343 | INFO     | [job] queue monitor thread has finished
[2025-10-13 02:38:21] 2025-10-13 06:37:32,349 | INFO     | [data] control thread has finished
[2025-10-13 02:38:21] 2025-10-13 06:37:32,390 | INFO     | [data] copytool_in thread has finished
[2025-10-13 02:38:21] 2025-10-13 06:37:32,391 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 02:38:21] 2025-10-13 06:37:32,444 | INFO     | [payload] validate_post thread has finished
[2025-10-13 02:38:21] 2025-10-13 06:37:32,465 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 02:38:21] 2025-10-13 06:37:32,622 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 02:38:21] 2025-10-13 06:37:32,773 | INFO     | [payload] control thread has finished
[2025-10-13 02:38:21] 2025-10-13 06:37:32,838 | INFO     | [data] copytool_out thread has finished
[2025-10-13 02:38:21] 2025-10-13 06:37:33,099 | INFO     | [job] control thread has finished
[2025-10-13 02:38:21] 2025-10-13 06:37:35,924 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 02:38:21] 2025-10-13 06:37:59,403 | INFO     | PID=2554655 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 02:38:21] 2025-10-13 06:37:59,403 | INFO     | .. there are 47 such processes running
[2025-10-13 02:38:21] 2025-10-13 06:37:59,417 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 02:38:21] 2025-10-13 06:37:59,417 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 02:38:21] 2025-10-13 06:37:59,417 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 02:38:21] 2025-10-13 06:38:13,496 | INFO     | [monitor] cgroup control has ended
[2025-10-13 02:38:21] 2025-10-13 06:38:13,947 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140352845391680)>', '<ExcThread(monitor, started 140352040183552)>']
[2025-10-13 02:38:21] 2025-10-13 06:38:14,528 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 02:38:21] 2025-10-13 06:38:14,528 | INFO     | [monitor] control thread has ended
[2025-10-13 02:38:21] 2025-10-13 06:38:18,972 | INFO     | all workflow threads have been joined
[2025-10-13 02:38:21] 2025-10-13 06:38:18,972 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 02:38:21] 2025-10-13 06:38:18,973 | INFO     | traces error code: 0
[2025-10-13 02:38:21] 2025-10-13 06:38:18,973 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 02:38:21] 2025-10-13 06:38:20,360 [wrapper] ==== pilot stdout END ====
[2025-10-13 02:38:21] 2025-10-13 06:38:20,416 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 02:38:21] 2025-10-13 06:38:20,482 [wrapper] pilotpid: 2554655
[2025-10-13 02:38:21] 2025-10-13 06:38:20,490 [wrapper] Pilot exit status: 0
[2025-10-13 02:38:21] 2025-10-13 06:38:20,715 [wrapper] pandaids: 6840969096
[2025-10-13 02:38:21] 2025-10-13 06:38:20,891 [wrapper] cleanup supervisor_pilot  740107 2554656
[2025-10-13 02:38:21] 2025-10-13 06:38:20,905 [wrapper] Test setup, not cleaning
[2025-10-13 02:38:21] 2025-10-13 06:38:20,967 [wrapper] apfmon messages muted
[2025-10-13 02:38:21] 2025-10-13 06:38:21,000 [wrapper] ==== wrapper stdout END ====
[2025-10-13 02:38:21] 2025-10-13 06:38:21,150 [wrapper] ==== wrapper stderr END ====
[2025-10-13 02:38:21]  *** Error codes and diagnostics ***
[2025-10-13 02:38:21]     "exeErrorCode": 0,
[2025-10-13 02:38:21]     "exeErrorDiag": "",
[2025-10-13 02:38:21]     "pilotErrorCode": 0,
[2025-10-13 02:38:21]     "pilotErrorDiag": "",
[2025-10-13 02:38:21]  *** Listing of results directory ***
[2025-10-13 02:38:21] total 421884
[2025-10-13 02:38:21] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 19:11 pilot3.tar.gz
[2025-10-13 02:38:21] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:17 queuedata.json
[2025-10-13 02:38:21] -rwx------. 1 boincer umatlas     36292 Oct 12 19:18 runpilot2-wrapper.sh
[2025-10-13 02:38:21] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 02:38:21] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:04 run_atlas
[2025-10-13 02:38:21] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:04 job.xml
[2025-10-13 02:38:21] -rw-r--r--. 2 boincer umatlas 221570828 Oct 13 00:04 EVNT.46676267._001822.pool.root.1
[2025-10-13 02:38:21] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:04 start_atlas.sh
[2025-10-13 02:38:21] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:04 shared
[2025-10-13 02:38:21] -rw-r--r--. 2 boincer umatlas    569690 Oct 13 00:04 input.tar.gz
[2025-10-13 02:38:21] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:04 boinc_lockfile
[2025-10-13 02:38:21] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:04 pandaJob.out
[2025-10-13 02:38:21] -rw-------. 1 boincer umatlas    974373 Oct 13 00:05 agis_schedconf.cvmfs.json
[2025-10-13 02:38:21] -rw-------. 1 boincer umatlas   1560580 Oct 13 00:05 agis_ddmendpoints.agis.ALL.json
[2025-10-13 02:38:21] drwx------. 5 boincer umatlas      4096 Oct 13 00:05 pilot3
[2025-10-13 02:38:21] -rw-r--r--. 1 boincer umatlas      7161 Oct 13 02:29 init_data.xml
[2025-10-13 02:38:21] -rw-------. 1 boincer umatlas 203661705 Oct 13 02:35 HITS.46676269._092097.pool.root.1
[2025-10-13 02:38:21] -rw-r--r--. 1 boincer umatlas       530 Oct 13 02:36 boinc_task_state.xml
[2025-10-13 02:38:21] -rw-------. 1 boincer umatlas      1063 Oct 13 02:36 memory_monitor_summary.json
[2025-10-13 02:38:21] -rw-------. 1 boincer umatlas    387560 Oct 13 02:36 log.46676269._092097.job.log.tgz.1
[2025-10-13 02:38:21] -rw-------. 1 boincer umatlas      7799 Oct 13 02:37 heartbeat.json
[2025-10-13 02:38:21] -rw-------. 1 boincer umatlas        95 Oct 13 02:37 pilot_heartbeat.json
[2025-10-13 02:38:21] -rw-r--r--. 1 boincer umatlas        27 Oct 13 02:38 wrapper_checkpoint.txt
[2025-10-13 02:38:21] -rw-------. 1 boincer umatlas      4825 Oct 13 02:38 pilotlog.txt
[2025-10-13 02:38:21] -rw-------. 1 boincer umatlas   1052053 Oct 13 02:38 log.46676269._092097.job.log.1
[2025-10-13 02:38:21] -rw-------. 1 boincer umatlas       357 Oct 13 02:38 output.list
[2025-10-13 02:38:21] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 02:38 boinc_mmap_file
[2025-10-13 02:38:21] -rw-r--r--. 1 boincer umatlas       620 Oct 13 02:38 runtime_log
[2025-10-13 02:38:21] -rw-------. 1 boincer umatlas   1454080 Oct 13 02:38 result.tar.gz
[2025-10-13 02:38:21] -rw-------. 1 boincer umatlas       656 Oct 13 02:38 X2TMDm8VKS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDme1lNDmhEWYHn.diag
[2025-10-13 02:38:21] -rw-r--r--. 1 boincer umatlas      8707 Oct 13 02:38 runtime_log.err
[2025-10-13 02:38:21] -rw-r--r--. 1 boincer umatlas     21253 Oct 13 02:38 stderr.txt
[2025-10-13 02:38:21] HITS file was successfully produced:
[2025-10-13 02:38:21] -rw-------. 1 boincer umatlas 203661705 Oct 13 02:35 shared/HITS.pool.root.1
[2025-10-13 02:38:22]  *** Contents of shared directory: ***
[2025-10-13 02:38:22] total 417276
[2025-10-13 02:38:22] -rw-r--r--. 2 boincer umatlas 221570828 Oct 13 00:04 ATLAS.root_0
[2025-10-13 02:38:22] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:04 start_atlas.sh
[2025-10-13 02:38:22] -rw-r--r--. 2 boincer umatlas    569690 Oct 13 00:04 input.tar.gz
[2025-10-13 02:38:22] -rw-------. 1 boincer umatlas 203661705 Oct 13 02:35 HITS.pool.root.1
[2025-10-13 02:38:22] -rw-------. 1 boincer umatlas   1454080 Oct 13 02:38 result.tar.gz
02:38:23 (2493658): run_atlas exited; CPU time 25095.107532
02:38:23 (2493658): called boinc_finish(0)

</stderr_txt>
]]>

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