Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:18 (3450895): wrapper (7.7.26015): starting
00:02:18 (3450895): wrapper: running run_atlas (--nthreads 10)
[2025-10-13 00:02:18] Arguments: --nthreads 10
[2025-10-13 00:02:18] Threads: 10
[2025-10-13 00:02:18] Checking for CVMFS
[2025-10-13 00:02:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:02:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:02:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:02:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:02:20] 2.13.2.0 870721 130195 850888 151647 3 605 32666403 32935937 48845 16776704 0 391760440 99.724 270358935 18251 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:02:20] CVMFS is ok
[2025-10-13 00:02:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:02:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:02:20] Further information can be found at the LHC@home message board.
[2025-10-13 00:02:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:02:20] Checking for apptainer binary...
[2025-10-13 00:02:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:02:20] Running /usr/bin/apptainer --version
[2025-10-13 00:02:21] apptainer version 1.4.3-1.el9
[2025-10-13 00:02:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:02:21] lc-10-11.aglt2.org
[2025-10-13 00:02:21] apptainer works
[2025-10-13 00:02:21] Set ATHENA_PROC_NUMBER=10
[2025-10-13 00:02:21] Set ATHENA_CORE_NUMBER=10
[2025-10-13 00:02:21] Starting ATLAS job with PandaID=6840749838
[2025-10-13 00:02:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:45:29]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:45:29] 2025-10-13 09:44:45,290 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:45:29] 2025-10-13 09:44:45,290 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:45:29] 2025-10-13 09:44:45,295 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:45:29] 2025-10-13 09:44:45,296 | INFO     | sum of square deviations: 11449989931.189096
[2025-10-13 05:45:29] 2025-10-13 09:44:45,299 | INFO     | sum of deviations: 166445951096.1351
[2025-10-13 05:45:29] 2025-10-13 09:44:45,299 | INFO     | mean x: 1760338508.4864864
[2025-10-13 05:45:29] 2025-10-13 09:44:45,299 | INFO     | mean y: 2135967.4744744743
[2025-10-13 05:45:29] 2025-10-13 09:44:45,299 | INFO     | -- intersect: -25587512500.081562
[2025-10-13 05:45:29] 2025-10-13 09:44:45,299 | INFO     | intersect: -25587512500.081562
[2025-10-13 05:45:29] 2025-10-13 09:44:45,300 | INFO     | chi2: 4.716336558570762
[2025-10-13 05:45:29] 2025-10-13 09:44:45,300 | INFO     | sum of square deviations: 10941953564.972563
[2025-10-13 05:45:29] 2025-10-13 09:44:45,302 | INFO     | sum of deviations: 183671312205.72867
[2025-10-13 05:45:29] 2025-10-13 09:44:45,303 | INFO     | mean x: 1760338355.9908535
[2025-10-13 05:45:29] 2025-10-13 09:44:45,303 | INFO     | mean y: 2141070.576219512
[2025-10-13 05:45:29] 2025-10-13 09:44:45,303 | INFO     | -- intersect: -29546847037.53827
[2025-10-13 05:45:29] 2025-10-13 09:44:45,303 | INFO     | intersect: -29546847037.53827
[2025-10-13 05:45:29] 2025-10-13 09:44:45,303 | INFO     | chi2: 4.010594303155092
[2025-10-13 05:45:29] 2025-10-13 09:44:45,303 | INFO     | current chi2=4.010594303155092 (change=14.963780609192526 %)
[2025-10-13 05:45:29] 2025-10-13 09:44:45,303 | INFO     | right removable region: 327
[2025-10-13 05:45:29] 2025-10-13 09:44:45,304 | INFO     | sum of square deviations: 10941875179.987745
[2025-10-13 05:45:29] 2025-10-13 09:44:45,306 | INFO     | sum of deviations: 88877436955.50005
[2025-10-13 05:45:29] 2025-10-13 09:44:45,306 | INFO     | mean x: 1760338660.9939024
[2025-10-13 05:45:29] 2025-10-13 09:44:45,306 | INFO     | mean y: 2159192.25
[2025-10-13 05:45:29] 2025-10-13 09:44:45,307 | INFO     | -- intersect: -14296522321.588121
[2025-10-13 05:45:29] 2025-10-13 09:44:45,307 | INFO     | intersect: -14296522321.588121
[2025-10-13 05:45:29] 2025-10-13 09:44:45,307 | INFO     | chi2: 1.8781227598762729
[2025-10-13 05:45:29] 2025-10-13 09:44:45,307 | INFO     | current chi2=1.8781227598762729 (change=60.17835587955964 %)
[2025-10-13 05:45:29] 2025-10-13 09:44:45,308 | INFO     | sum of square deviations: 10449036292.749235
[2025-10-13 05:45:29] 2025-10-13 09:44:45,310 | INFO     | sum of deviations: 49095552499.49844
[2025-10-13 05:45:29] 2025-10-13 09:44:45,310 | INFO     | mean x: 1760338813.498452
[2025-10-13 05:45:29] 2025-10-13 09:44:45,310 | INFO     | mean y: 2171475.996904025
[2025-10-13 05:45:29] 2025-10-13 09:44:45,310 | INFO     | -- intersect: -8268907713.860029
[2025-10-13 05:45:29] 2025-10-13 09:44:45,310 | INFO     | intersect: -8268907713.860029
[2025-10-13 05:45:29] 2025-10-13 09:44:45,311 | INFO     | chi2: 1.1848510263962866
[2025-10-13 05:45:29] 2025-10-13 09:44:45,311 | INFO     | current chi2=1.1848510263962866 (change=36.913014862013476 %)
[2025-10-13 05:45:29] 2025-10-13 09:44:45,311 | INFO     | sum of square deviations: 9971220942.996782
[2025-10-13 05:45:29] 2025-10-13 09:44:45,314 | INFO     | sum of deviations: 27567768388.43083
[2025-10-13 05:45:29] 2025-10-13 09:44:45,314 | INFO     | mean x: 1760338966.0031447
[2025-10-13 05:45:29] 2025-10-13 09:44:45,314 | INFO     | mean y: 2178345.56918239
[2025-10-13 05:45:29] 2025-10-13 09:44:45,314 | INFO     | -- intersect: -4864689731.803854
[2025-10-13 05:45:29] 2025-10-13 09:44:45,314 | INFO     | intersect: -4864689731.803854
[2025-10-13 05:45:29] 2025-10-13 09:44:45,315 | INFO     | chi2: 1.0067802420626064
[2025-10-13 05:45:29] 2025-10-13 09:44:45,317 | INFO     | current chi2=1.0067802420626064 (change=15.028959790437185 %)
[2025-10-13 05:45:29] 2025-10-13 09:44:45,317 | INFO     | left removable region: 30
[2025-10-13 05:45:29] 2025-10-13 09:44:45,317 | INFO     | sum of square deviations: 8123355774.208765
[2025-10-13 05:45:29] 2025-10-13 09:44:45,319 | INFO     | sum of deviations: 23583582193.468006
[2025-10-13 05:45:29] 2025-10-13 09:44:45,320 | INFO     | mean x: 1760339240.5117846
[2025-10-13 05:45:29] 2025-10-13 09:44:45,321 | INFO     | mean y: 2191571.437710438
[2025-10-13 05:45:29] 2025-10-13 09:44:45,321 | INFO     | -- intersect: -5108394043.783653
[2025-10-13 05:45:29] 2025-10-13 09:44:45,321 | INFO     | intersect: -5108394043.783653
[2025-10-13 05:45:29] 2025-10-13 09:44:45,321 | INFO     | chi2: 0.12505443246712092
[2025-10-13 05:45:29] 2025-10-13 09:44:45,321 | INFO     | -- intersect: -5108394043.783653
[2025-10-13 05:45:29] 2025-10-13 09:44:45,322 | INFO     | current memory leak: 2.90 B/s (using 297 data points, chi2=0.13)
[2025-10-13 05:45:29] 2025-10-13 09:44:45,322 | INFO     | could have reported an average CPU frequency of 2630 MHz (15 samples)
[2025-10-13 05:45:29] 2025-10-13 09:44:45,322 | INFO     | ..............................
[2025-10-13 05:45:29] 2025-10-13 09:44:45,323 | INFO     | . Timing measurements:
[2025-10-13 05:45:29] 2025-10-13 09:44:45,323 | INFO     | . get job = 0 s
[2025-10-13 05:45:29] 2025-10-13 09:44:45,323 | INFO     | . initial setup = 8 s
[2025-10-13 05:45:29] 2025-10-13 09:44:45,323 | INFO     | . payload setup = 45 s
[2025-10-13 05:45:29] 2025-10-13 09:44:45,323 | INFO     | . stage-in = 0 s
[2025-10-13 05:45:29] 2025-10-13 09:44:45,323 | INFO     | . payload execution = 20308 s
[2025-10-13 05:45:29] 2025-10-13 09:44:45,323 | INFO     | . stage-out = 3 s
[2025-10-13 05:45:29] 2025-10-13 09:44:45,323 | INFO     | . log creation = 0 s
[2025-10-13 05:45:29] 2025-10-13 09:44:45,323 | INFO     | ..............................
[2025-10-13 05:45:29] 2025-10-13 09:44:45,486 | INFO     | 
[2025-10-13 05:45:29] 2025-10-13 09:44:45,486 | INFO     | job summary report
[2025-10-13 05:45:29] 2025-10-13 09:44:45,486 | INFO     | --------------------------------------------------
[2025-10-13 05:45:29] 2025-10-13 09:44:45,486 | INFO     | PanDA job id: 6840749838
[2025-10-13 05:45:29] 2025-10-13 09:44:45,486 | INFO     | task id: 46676269
[2025-10-13 05:45:29] 2025-10-13 09:44:45,486 | INFO     | errors: (none)
[2025-10-13 05:45:29] 2025-10-13 09:44:45,486 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:45:29] 2025-10-13 09:44:45,486 | INFO     | pilot state: finished 
[2025-10-13 05:45:29] 2025-10-13 09:44:45,486 | INFO     | transexitcode: 0
[2025-10-13 05:45:29] 2025-10-13 09:44:45,487 | INFO     | exeerrorcode: 0
[2025-10-13 05:45:29] 2025-10-13 09:44:45,487 | INFO     | exeerrordiag: 
[2025-10-13 05:45:29] 2025-10-13 09:44:45,487 | INFO     | exitcode: 0
[2025-10-13 05:45:29] 2025-10-13 09:44:45,487 | INFO     | exitmsg: OK
[2025-10-13 05:45:29] 2025-10-13 09:44:45,487 | INFO     | cpuconsumptiontime: 44123 s
[2025-10-13 05:45:29] 2025-10-13 09:44:45,487 | INFO     | nevents: 400
[2025-10-13 05:45:29] 2025-10-13 09:44:45,487 | INFO     | neventsw: 0
[2025-10-13 05:45:29] 2025-10-13 09:44:45,487 | INFO     | pid: 3500947
[2025-10-13 05:45:29] 2025-10-13 09:44:45,487 | INFO     | pgrp: 3500947
[2025-10-13 05:45:29] 2025-10-13 09:44:45,487 | INFO     | corecount: 10
[2025-10-13 05:45:29] 2025-10-13 09:44:45,487 | INFO     | event service: False
[2025-10-13 05:45:29] 2025-10-13 09:44:45,487 | INFO     | sizes: {0: 2348630, 1: 2348686, 2: 2348742, 3: 2348941, 14: 2348941, 26: 2348969, 36: 2349125, 39: 2349415, 47: 2349443, 20358: 2382529, 20361: 2391527, 20362: 239
[2025-10-13 05:45:29] 2025-10-13 09:44:45,487 | INFO     | --------------------------------------------------
[2025-10-13 05:45:29] 2025-10-13 09:44:45,487 | INFO     | 
[2025-10-13 05:45:29] 2025-10-13 09:44:45,488 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-10-13 05:45:29] 2025-10-13 09:44:45,556 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:45:29] 2025-10-13 09:44:45,556 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:45:29] 2025-10-13 09:44:45,557 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:45:29] 2025-10-13 09:44:45,557 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:45:29] 2025-10-13 09:44:45,557 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:45:29] 2025-10-13 09:44:45,557 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:45:29] 2025-10-13 09:44:45,557 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:45:29] 2025-10-13 09:44:45,557 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:45:29] 2025-10-13 09:44:45,557 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:45:29] 2025-10-13 09:44:45,557 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:45:29] 2025-10-13 09:44:45,557 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:45:29] 2025-10-13 09:44:45,557 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:45:29] 2025-10-13 09:44:45,558 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:45:29] 2025-10-13 09:44:45,558 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:45:29] 2025-10-13 09:44:45,558 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:45:29] 2025-10-13 09:44:45,558 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:45:29] 2025-10-13 09:44:45,558 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:45:29] 2025-10-13 09:44:45,558 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:45:29] 2025-10-13 09:44:45,558 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:45:29] 2025-10-13 09:44:45,558 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:45:29] 2025-10-13 09:44:45,558 | INFO     | job 6840749838 has completed (purged errors)
[2025-10-13 05:45:29] 2025-10-13 09:44:45,559 | INFO     | overall cleanup function is called
[2025-10-13 05:45:29] 2025-10-13 09:44:46,568 | INFO     | --- collectZombieJob: --- 10, [3500947]
[2025-10-13 05:45:29] 2025-10-13 09:44:46,568 | INFO     | zombie collector waiting for pid 3500947
[2025-10-13 05:45:29] 2025-10-13 09:44:46,568 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:45:29] 2025-10-13 09:44:46,571 | INFO     | collected zombie processes
[2025-10-13 05:45:29] 2025-10-13 09:44:46,571 | INFO     | will attempt to kill all subprocesses of pid=3500947
[2025-10-13 05:45:29] 2025-10-13 09:44:47,710 | INFO     | process IDs to be killed: [3500947] (in reverse order)
[2025-10-13 05:45:29] 2025-10-13 09:44:47,926 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:45:29] 2025-10-13 09:44:47,929 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:45:29] 2025-10-13 09:44:47,964 | INFO     | did not find any defunct processes belonging to 3500947
[2025-10-13 05:45:29] 2025-10-13 09:44:48,018 | INFO     | did not find any defunct processes belonging to 3500947
[2025-10-13 05:45:29] 2025-10-13 09:44:48,018 | INFO     | ready for new job
[2025-10-13 05:45:29] 2025-10-13 09:44:48,019 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:45:29] 2025-10-13 09:44:48,025 | INFO     | ***************************************
[2025-10-13 05:45:29] 2025-10-13 09:44:48,025 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:45:29] 2025-10-13 09:44:48,025 | INFO     | ***************************************
[2025-10-13 05:45:29] 2025-10-13 09:44:48,025 | INFO     | 
[2025-10-13 05:45:29] 2025-10-13 09:44:48,035 | INFO     | architecture information:
[2025-10-13 05:45:29] 2025-10-13 09:44:48,039 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:45:29] 2025-10-13 09:44:48,074 | INFO     | cat /etc/os-release:
[2025-10-13 05:45:29] NAME="CentOS Linux"
[2025-10-13 05:45:29] VERSION="7 (Core)"
[2025-10-13 05:45:29] ID="centos"
[2025-10-13 05:45:29] ID_LIKE="rhel fedora"
[2025-10-13 05:45:29] VERSION_ID="7"
[2025-10-13 05:45:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:45:29] ANSI_COLOR="0;31"
[2025-10-13 05:45:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:45:29] HOME_URL="https://www.centos.org/"
[2025-10-13 05:45:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:45:29] 
[2025-10-13 05:45:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:45:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:45:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:45:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:45:29] 
[2025-10-13 05:45:29] 2025-10-13 09:44:48,077 | INFO     | ***************************************
[2025-10-13 05:45:29] 2025-10-13 09:44:48,579 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-10-13 05:45:29] 2025-10-13 09:44:48,686 | INFO     | sufficient remaining disk space (94840553472 B)
[2025-10-13 05:45:29] 2025-10-13 09:44:48,686 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:45:29] 2025-10-13 09:44:48,686 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:45:29] 2025-10-13 09:44:48,687 | INFO     | update_server=False
[2025-10-13 05:45:29] 2025-10-13 09:44:48,687 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:45:29] 2025-10-13 09:44:48,688 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:45:29] 2025-10-13 09:44:48,688 | INFO     | aborting loop
[2025-10-13 05:45:29] 2025-10-13 09:44:48,775 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:45:29] 2025-10-13 09:44:48,910 | INFO     | all payload control threads have been joined
[2025-10-13 05:45:29] 2025-10-13 09:44:48,959 | INFO     | all data control threads have been joined
[2025-10-13 05:45:29] 2025-10-13 09:44:49,693 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:45:29] 2025-10-13 09:44:49,694 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:45:29] 2025-10-13 09:44:49,825 | INFO     | all job control threads have been joined
[2025-10-13 05:45:29] 2025-10-13 09:44:49,844 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:45:29] 2025-10-13 09:44:49,916 | INFO     | [payload] control thread has finished
[2025-10-13 05:45:29] 2025-10-13 09:44:49,965 | INFO     | [data] control thread has finished
[2025-10-13 05:45:29] 2025-10-13 09:44:50,001 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:45:29] 2025-10-13 09:44:50,099 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:45:29] 2025-10-13 09:44:50,330 | INFO     | [job] validate thread has finished
[2025-10-13 05:45:29] 2025-10-13 09:44:50,510 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:45:29] 2025-10-13 09:44:50,514 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:45:29] 2025-10-13 09:44:50,522 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:45:29] 2025-10-13 09:44:50,530 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:45:29] 2025-10-13 09:44:50,648 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:45:29] 2025-10-13 09:44:50,784 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:45:29] 2025-10-13 09:44:50,833 | INFO     | [job] control thread has finished
[2025-10-13 05:45:29] 2025-10-13 09:44:51,516 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:45:29] 2025-10-13 09:44:54,526 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:45:29] 2025-10-13 09:44:59,274 | INFO     | job.realtimelogging is not enabled
[2025-10-13 05:45:29] 2025-10-13 09:45:00,280 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:45:29] 2025-10-13 09:45:17,987 | INFO     | PID=3461308 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:45:29] 2025-10-13 09:45:17,988 | INFO     | .. there are 50 such processes running
[2025-10-13 05:45:29] 2025-10-13 09:45:17,988 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:45:29] 2025-10-13 09:45:17,988 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:45:29] 2025-10-13 09:45:17,988 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:45:29] 2025-10-13 09:45:22,874 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:45:29] 2025-10-13 09:45:23,446 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139773297076032)>', '<ExcThread(monitor, started 139772655822592)>']
[2025-10-13 05:45:29] 2025-10-13 09:45:24,030 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:45:29] 2025-10-13 09:45:24,030 | INFO     | [monitor] control thread has ended
[2025-10-13 05:45:29] 2025-10-13 09:45:28,471 | INFO     | all workflow threads have been joined
[2025-10-13 05:45:29] 2025-10-13 09:45:28,471 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:45:29] 2025-10-13 09:45:28,471 | INFO     | traces error code: 0
[2025-10-13 05:45:29] 2025-10-13 09:45:28,472 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:45:29] 2025-10-13 09:45:28,720 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:45:29] 2025-10-13 09:45:28,748 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:45:29] 2025-10-13 09:45:28,767 [wrapper] pilotpid: 3461308
[2025-10-13 05:45:29] 2025-10-13 09:45:28,812 [wrapper] Pilot exit status: 0
[2025-10-13 05:45:29] 2025-10-13 09:45:28,862 [wrapper] pandaids: 6840749838
[2025-10-13 05:45:29] 2025-10-13 09:45:29,026 [wrapper] cleanup supervisor_pilot  596779 3461309
[2025-10-13 05:45:29] 2025-10-13 09:45:29,044 [wrapper] Test setup, not cleaning
[2025-10-13 05:45:29] 2025-10-13 09:45:29,053 [wrapper] apfmon messages muted
[2025-10-13 05:45:29] 2025-10-13 09:45:29,056 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:45:29] 2025-10-13 09:45:29,061 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:45:29]  *** Error codes and diagnostics ***
[2025-10-13 05:45:29]     "exeErrorCode": 0,
[2025-10-13 05:45:29]     "exeErrorDiag": "",
[2025-10-13 05:45:29]     "pilotErrorCode": 0,
[2025-10-13 05:45:29]     "pilotErrorDiag": "",
[2025-10-13 05:45:29]  *** Listing of results directory ***
[2025-10-13 05:45:29] total 411132
[2025-10-13 05:45:29] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 16:55 pilot3.tar.gz
[2025-10-13 05:45:29] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 16:56 queuedata.json
[2025-10-13 05:45:29] -rwx------. 1 boincer umatlas     36292 Oct 12 16:57 runpilot2-wrapper.sh
[2025-10-13 05:45:29] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:45:29] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:02 run_atlas
[2025-10-13 05:45:29] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:02 job.xml
[2025-10-13 05:45:29] -rw-r--r--. 2 boincer umatlas 222926901 Oct 13 00:02 EVNT.46676267._004760.pool.root.1
[2025-10-13 05:45:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:02 start_atlas.sh
[2025-10-13 05:45:29] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:02 shared
[2025-10-13 05:45:29] -rw-r--r--. 2 boincer umatlas    569678 Oct 13 00:02 input.tar.gz
[2025-10-13 05:45:29] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:02 boinc_lockfile
[2025-10-13 05:45:29] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:02 pandaJob.out
[2025-10-13 05:45:29] -rw-------. 1 boincer umatlas    974373 Oct 13 00:03 agis_schedconf.cvmfs.json
[2025-10-13 05:45:29] drwx------. 5 boincer umatlas      4096 Oct 13 00:03 pilot3
[2025-10-13 05:45:29] -rw-r--r--. 1 boincer umatlas      6867 Oct 13 05:40 init_data.xml
[2025-10-13 05:45:29] -rw-------. 1 boincer umatlas 188619468 Oct 13 05:43 HITS.46676269._089266.pool.root.1
[2025-10-13 05:45:29] -rw-r--r--. 1 boincer umatlas       531 Oct 13 05:43 boinc_task_state.xml
[2025-10-13 05:45:29] -rw-------. 1 boincer umatlas      1045 Oct 13 05:44 memory_monitor_summary.json
[2025-10-13 05:45:29] -rw-------. 1 boincer umatlas   1560580 Oct 13 05:44 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:45:29] -rw-------. 1 boincer umatlas    553930 Oct 13 05:44 log.46676269._089266.job.log.tgz.1
[2025-10-13 05:45:29] -rw-------. 1 boincer umatlas        95 Oct 13 05:44 pilot_heartbeat.json
[2025-10-13 05:45:29] -rw-------. 1 boincer umatlas      7831 Oct 13 05:44 heartbeat.json
[2025-10-13 05:45:29] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 05:45 boinc_mmap_file
[2025-10-13 05:45:29] -rw-r--r--. 1 boincer umatlas        28 Oct 13 05:45 wrapper_checkpoint.txt
[2025-10-13 05:45:29] -rw-------. 1 boincer umatlas      4896 Oct 13 05:45 pilotlog.txt
[2025-10-13 05:45:29] -rw-------. 1 boincer umatlas   2223714 Oct 13 05:45 log.46676269._089266.job.log.1
[2025-10-13 05:45:29] -rw-------. 1 boincer umatlas       357 Oct 13 05:45 output.list
[2025-10-13 05:45:29] -rw-r--r--. 1 boincer umatlas       620 Oct 13 05:45 runtime_log
[2025-10-13 05:45:29] -rw-------. 1 boincer umatlas   2795520 Oct 13 05:45 result.tar.gz
[2025-10-13 05:45:29] -rw-r--r--. 1 boincer umatlas      8706 Oct 13 05:45 runtime_log.err
[2025-10-13 05:45:29] -rw-------. 1 boincer umatlas       656 Oct 13 05:45 aQDNDmuIIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6WlNDm8rsIdn.diag
[2025-10-13 05:45:29] -rw-r--r--. 1 boincer umatlas     21026 Oct 13 05:45 stderr.txt
[2025-10-13 05:45:29] HITS file was successfully produced:
[2025-10-13 05:45:29] -rw-------. 1 boincer umatlas 188619468 Oct 13 05:43 shared/HITS.pool.root.1
[2025-10-13 05:45:29]  *** Contents of shared directory: ***
[2025-10-13 05:45:29] total 405216
[2025-10-13 05:45:29] -rw-r--r--. 2 boincer umatlas 222926901 Oct 13 00:02 ATLAS.root_0
[2025-10-13 05:45:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:02 start_atlas.sh
[2025-10-13 05:45:29] -rw-r--r--. 2 boincer umatlas    569678 Oct 13 00:02 input.tar.gz
[2025-10-13 05:45:29] -rw-------. 1 boincer umatlas 188619468 Oct 13 05:43 HITS.pool.root.1
[2025-10-13 05:45:29] -rw-------. 1 boincer umatlas   2795520 Oct 13 05:45 result.tar.gz
05:45:30 (3450895): run_atlas exited; CPU time 45142.828263
05:45:30 (3450895): called boinc_finish(0)

</stderr_txt>
]]>

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