Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:10:07 (2206563): wrapper (7.7.26015): starting
00:10:07 (2206563): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 00:10:07] Arguments: --nthreads 9
[2025-10-13 00:10:07] Threads: 9
[2025-10-13 00:10:07] Checking for CVMFS
[2025-10-13 00:10:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:10:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:10:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:10:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:10:12] 2.13.2.0 5406 6619 115872 151647 2 195 39488518 40960001 14716 16776704 0 10197828 99.878 2171865 33025 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:10:12] CVMFS is ok
[2025-10-13 00:10:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:10:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:10:12] Further information can be found at the LHC@home message board.
[2025-10-13 00:10:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:10:12] Checking for apptainer binary...
[2025-10-13 00:10:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:10:12] Running /usr/bin/apptainer --version
[2025-10-13 00:10:13] apptainer version 1.4.3-1.el9
[2025-10-13 00:10:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:10:13] c-210-35-3.aglt2.org
[2025-10-13 00:10:13] apptainer works
[2025-10-13 00:10:14] Set ATHENA_PROC_NUMBER=9
[2025-10-13 00:10:14] Set ATHENA_CORE_NUMBER=9
[2025-10-13 00:10:14] Starting ATLAS job with PandaID=6840852617
[2025-10-13 00:10:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:36:07]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:36:07] 2025-10-13 08:34:54,802 | INFO     | PID=2212726 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 04:36:07] 2025-10-13 08:34:54,803 | INFO     | .. there are 10 such processes running
[2025-10-13 04:36:07] 2025-10-13 08:34:55,137 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 04:36:07] 2025-10-13 08:34:55,181 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2507.3921428571425
[2025-10-13 04:36:07] 2025-10-13 08:34:55,229 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6840852617/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 04:36:07] 2025-10-13 08:34:55,230 | INFO     | extracted standard info from prmon json
[2025-10-13 04:36:07] 2025-10-13 08:34:55,231 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 04:36:07] 2025-10-13 08:34:55,231 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 04:36:07] 2025-10-13 08:34:55,235 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 04:36:07] 2025-10-13 08:34:55,235 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 04:36:07] 2025-10-13 08:34:55,257 | INFO     | fitting pss+swap vs Time
[2025-10-13 04:36:07] 2025-10-13 08:34:55,258 | INFO     | sum of square deviations: 5201833574.964844
[2025-10-13 04:36:07] 2025-10-13 08:34:55,277 | INFO     | sum of deviations: 111779848845.3125
[2025-10-13 04:36:07] 2025-10-13 08:34:55,277 | INFO     | mean x: 1760336642.9882812
[2025-10-13 04:36:07] 2025-10-13 08:34:55,277 | INFO     | mean y: 2490516.4375
[2025-10-13 04:36:07] 2025-10-13 08:34:55,278 | INFO     | -- intersect: -37824587384.92053
[2025-10-13 04:36:07] 2025-10-13 08:34:55,278 | INFO     | intersect: -37824587384.92053
[2025-10-13 04:36:07] 2025-10-13 08:34:55,278 | INFO     | chi2: 3.874395815031965
[2025-10-13 04:36:07] 2025-10-13 08:34:55,295 | INFO     | sum of square deviations: 4902870542.581683
[2025-10-13 04:36:07] 2025-10-13 08:34:55,297 | INFO     | sum of deviations: 125621417590.4541
[2025-10-13 04:36:07] 2025-10-13 08:34:55,310 | INFO     | mean x: 1760336490.4741037
[2025-10-13 04:36:07] 2025-10-13 08:34:55,311 | INFO     | mean y: 2497446.685258964
[2025-10-13 04:36:07] 2025-10-13 08:34:55,311 | INFO     | -- intersect: -45100868724.006905
[2025-10-13 04:36:07] 2025-10-13 08:34:55,311 | INFO     | intersect: -45100868724.006905
[2025-10-13 04:36:07] 2025-10-13 08:34:55,312 | INFO     | chi2: 3.17677296938915
[2025-10-13 04:36:07] 2025-10-13 08:34:55,312 | INFO     | current chi2=3.17677296938915 (change=18.005977678794785 %)
[2025-10-13 04:36:07] 2025-10-13 08:34:55,312 | INFO     | right removable region: 250
[2025-10-13 04:36:07] 2025-10-13 08:34:55,312 | INFO     | sum of square deviations: 4902824924.701215
[2025-10-13 04:36:07] 2025-10-13 08:34:55,315 | INFO     | sum of deviations: 51983196999.11152
[2025-10-13 04:36:07] 2025-10-13 08:34:55,315 | INFO     | mean x: 1760336795.5139441
[2025-10-13 04:36:07] 2025-10-13 08:34:55,315 | INFO     | mean y: 2520883.96812749
[2025-10-13 04:36:07] 2025-10-13 08:34:55,315 | INFO     | -- intersect: -18661807504.53999
[2025-10-13 04:36:07] 2025-10-13 08:34:55,315 | INFO     | intersect: -18661807504.53999
[2025-10-13 04:36:07] 2025-10-13 08:34:55,316 | INFO     | chi2: 1.6365987383568816
[2025-10-13 04:36:07] 2025-10-13 08:34:55,316 | INFO     | current chi2=1.6365987383568816 (change=57.758607625809155 %)
[2025-10-13 04:36:07] 2025-10-13 08:34:55,317 | INFO     | sum of square deviations: 4615536848.800806
[2025-10-13 04:36:07] 2025-10-13 08:34:55,319 | INFO     | sum of deviations: 25793888927.82527
[2025-10-13 04:36:07] 2025-10-13 08:34:55,319 | INFO     | mean x: 1760336948.0284553
[2025-10-13 04:36:07] 2025-10-13 08:34:55,319 | INFO     | mean y: 2534791.8821138213
[2025-10-13 04:36:07] 2025-10-13 08:34:55,320 | INFO     | -- intersect: -9835093462.519133
[2025-10-13 04:36:07] 2025-10-13 08:34:55,320 | INFO     | intersect: -9835093462.519133
[2025-10-13 04:36:07] 2025-10-13 08:34:55,320 | INFO     | chi2: 1.2994203894784762
[2025-10-13 04:36:07] 2025-10-13 08:34:55,320 | INFO     | current chi2=1.2994203894784762 (change=20.602383527249142 %)
[2025-10-13 04:36:07] 2025-10-13 08:34:55,321 | INFO     | left removable region: 20
[2025-10-13 04:36:07] 2025-10-13 08:34:55,321 | INFO     | sum of square deviations: 3772032529.72172
[2025-10-13 04:36:07] 2025-10-13 08:34:55,327 | INFO     | sum of deviations: 360077962.8086919
[2025-10-13 04:36:07] 2025-10-13 08:34:55,327 | INFO     | mean x: 1760337070.0347826
[2025-10-13 04:36:07] 2025-10-13 08:34:55,328 | INFO     | mean y: 2566555.7739130436
[2025-10-13 04:36:07] 2025-10-13 08:34:55,328 | INFO     | -- intersect: -165475098.43777764
[2025-10-13 04:36:07] 2025-10-13 08:34:55,328 | INFO     | intersect: -165475098.43777764
[2025-10-13 04:36:07] 2025-10-13 08:34:55,328 | INFO     | chi2: 0.12206005016011184
[2025-10-13 04:36:07] 2025-10-13 08:34:55,329 | INFO     | -- intersect: -165475098.43777764
[2025-10-13 04:36:07] 2025-10-13 08:34:55,329 | INFO     | current memory leak: 0.10 B/s (using 230 data points, chi2=0.12)
[2025-10-13 04:36:07] 2025-10-13 08:34:55,329 | INFO     | could have reported an average CPU frequency of 2547 MHz (12 samples)
[2025-10-13 04:36:07] 2025-10-13 08:34:55,332 | INFO     | ..............................
[2025-10-13 04:36:07] 2025-10-13 08:34:55,332 | INFO     | . Timing measurements:
[2025-10-13 04:36:07] 2025-10-13 08:34:55,333 | INFO     | . get job = 0 s
[2025-10-13 04:36:07] 2025-10-13 08:34:55,333 | INFO     | . initial setup = 5 s
[2025-10-13 04:36:07] 2025-10-13 08:34:55,333 | INFO     | . payload setup = 44 s
[2025-10-13 04:36:07] 2025-10-13 08:34:55,333 | INFO     | . stage-in = 0 s
[2025-10-13 04:36:07] 2025-10-13 08:34:55,333 | INFO     | . payload execution = 15619 s
[2025-10-13 04:36:07] 2025-10-13 08:34:55,333 | INFO     | . stage-out = 4 s
[2025-10-13 04:36:07] 2025-10-13 08:34:55,337 | INFO     | . log creation = 0 s
[2025-10-13 04:36:07] 2025-10-13 08:34:55,337 | INFO     | ..............................
[2025-10-13 04:36:07] 2025-10-13 08:34:55,599 | INFO     | 
[2025-10-13 04:36:07] 2025-10-13 08:34:55,599 | INFO     | job summary report
[2025-10-13 04:36:07] 2025-10-13 08:34:55,599 | INFO     | --------------------------------------------------
[2025-10-13 04:36:07] 2025-10-13 08:34:55,599 | INFO     | PanDA job id: 6840852617
[2025-10-13 04:36:07] 2025-10-13 08:34:55,599 | INFO     | task id: 46676269
[2025-10-13 04:36:07] 2025-10-13 08:34:55,599 | INFO     | errors: (none)
[2025-10-13 04:36:07] 2025-10-13 08:34:55,599 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 04:36:07] 2025-10-13 08:34:55,600 | INFO     | pilot state: finished 
[2025-10-13 04:36:07] 2025-10-13 08:34:55,600 | INFO     | transexitcode: 0
[2025-10-13 04:36:07] 2025-10-13 08:34:55,600 | INFO     | exeerrorcode: 0
[2025-10-13 04:36:07] 2025-10-13 08:34:55,600 | INFO     | exeerrordiag: 
[2025-10-13 04:36:07] 2025-10-13 08:34:55,600 | INFO     | exitcode: 0
[2025-10-13 04:36:07] 2025-10-13 08:34:55,600 | INFO     | exitmsg: OK
[2025-10-13 04:36:07] 2025-10-13 08:34:55,600 | INFO     | cpuconsumptiontime: 46838 s
[2025-10-13 04:36:07] 2025-10-13 08:34:55,600 | INFO     | nevents: 400
[2025-10-13 04:36:07] 2025-10-13 08:34:55,600 | INFO     | neventsw: 0
[2025-10-13 04:36:07] 2025-10-13 08:34:55,600 | INFO     | pid: 2219432
[2025-10-13 04:36:07] 2025-10-13 08:34:55,600 | INFO     | pgrp: 2219432
[2025-10-13 04:36:07] 2025-10-13 08:34:55,600 | INFO     | corecount: 9
[2025-10-13 04:36:07] 2025-10-13 08:34:55,600 | INFO     | event service: False
[2025-10-13 04:36:07] 2025-10-13 08:34:55,600 | INFO     | sizes: {0: 2348630, 1: 2348686, 2: 2348742, 3: 2348941, 14: 2348941, 26: 2348969, 37: 2349387, 49: 2349415, 15668: 2380735, 15674: 2389733, 15676: 2389789, 15714: 
[2025-10-13 04:36:07] 2025-10-13 08:34:55,601 | INFO     | --------------------------------------------------
[2025-10-13 04:36:07] 2025-10-13 08:34:55,601 | INFO     | 
[2025-10-13 04:36:07] 2025-10-13 08:34:55,601 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-13 04:36:07] 2025-10-13 08:34:55,819 | INFO     | time since job start (15805s) is within the limit (172800.0s)
[2025-10-13 04:36:07] 2025-10-13 08:34:55,860 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 04:36:07] 2025-10-13 08:34:55,860 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 04:36:07] 2025-10-13 08:34:55,860 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 04:36:07] 2025-10-13 08:34:55,860 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 04:36:07] 2025-10-13 08:34:55,860 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 04:36:07] 2025-10-13 08:34:55,860 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 04:36:07] 2025-10-13 08:34:55,861 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 04:36:07] 2025-10-13 08:34:55,861 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 04:36:07] 2025-10-13 08:34:55,861 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 04:36:07] 2025-10-13 08:34:55,861 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 04:36:07] 2025-10-13 08:34:55,861 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 04:36:07] 2025-10-13 08:34:55,861 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 04:36:07] 2025-10-13 08:34:55,861 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 04:36:07] 2025-10-13 08:34:55,861 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 04:36:07] 2025-10-13 08:34:55,861 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 04:36:07] 2025-10-13 08:34:55,861 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 04:36:07] 2025-10-13 08:34:55,861 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 04:36:07] 2025-10-13 08:34:55,861 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 04:36:07] 2025-10-13 08:34:55,861 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 04:36:07] 2025-10-13 08:34:55,861 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 04:36:07] 2025-10-13 08:34:55,862 | INFO     | job 6840852617 has completed (purged errors)
[2025-10-13 04:36:07] 2025-10-13 08:34:55,862 | INFO     | overall cleanup function is called
[2025-10-13 04:36:07] 2025-10-13 08:34:56,875 | INFO     | --- collectZombieJob: --- 10, [2219432]
[2025-10-13 04:36:07] 2025-10-13 08:34:56,875 | INFO     | zombie collector waiting for pid 2219432
[2025-10-13 04:36:07] 2025-10-13 08:34:56,876 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 04:36:07] 2025-10-13 08:34:56,877 | INFO     | collected zombie processes
[2025-10-13 04:36:07] 2025-10-13 08:34:56,877 | INFO     | will attempt to kill all subprocesses of pid=2219432
[2025-10-13 04:36:07] 2025-10-13 08:34:59,036 | INFO     | process IDs to be killed: [2219432] (in reverse order)
[2025-10-13 04:36:07] 2025-10-13 08:34:59,532 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:36:07] 2025-10-13 08:34:59,532 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:36:07] 2025-10-13 08:34:59,545 | INFO     | did not find any defunct processes belonging to 2219432
[2025-10-13 04:36:07] 2025-10-13 08:34:59,563 | INFO     | did not find any defunct processes belonging to 2219432
[2025-10-13 04:36:07] 2025-10-13 08:34:59,563 | INFO     | ready for new job
[2025-10-13 04:36:07] 2025-10-13 08:34:59,563 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:36:07] 2025-10-13 08:34:59,566 | INFO     | ***************************************
[2025-10-13 04:36:07] 2025-10-13 08:34:59,566 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-13 04:36:07] 2025-10-13 08:34:59,566 | INFO     | ***************************************
[2025-10-13 04:36:07] 2025-10-13 08:34:59,566 | INFO     | 
[2025-10-13 04:36:07] 2025-10-13 08:34:59,570 | INFO     | architecture information:
[2025-10-13 04:36:07] 2025-10-13 08:34:59,575 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:36:07] 2025-10-13 08:34:59,642 | INFO     | cat /etc/os-release:
[2025-10-13 04:36:07] NAME="CentOS Linux"
[2025-10-13 04:36:07] VERSION="7 (Core)"
[2025-10-13 04:36:07] ID="centos"
[2025-10-13 04:36:07] ID_LIKE="rhel fedora"
[2025-10-13 04:36:07] VERSION_ID="7"
[2025-10-13 04:36:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:36:07] ANSI_COLOR="0;31"
[2025-10-13 04:36:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:36:07] HOME_URL="https://www.centos.org/"
[2025-10-13 04:36:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:36:07] 
[2025-10-13 04:36:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:36:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:36:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:36:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:36:07] 
[2025-10-13 04:36:07] 2025-10-13 08:34:59,643 | INFO     | ***************************************
[2025-10-13 04:36:07] 2025-10-13 08:35:00,146 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-13 04:36:07] 2025-10-13 08:35:00,210 | INFO     | sufficient remaining disk space (74183606272 B)
[2025-10-13 04:36:07] 2025-10-13 08:35:00,211 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:36:07] 2025-10-13 08:35:00,211 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:36:07] 2025-10-13 08:35:00,211 | INFO     | update_server=False
[2025-10-13 04:36:07] 2025-10-13 08:35:00,211 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:36:07] 2025-10-13 08:35:00,212 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:36:07] 2025-10-13 08:35:00,212 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:36:07] 2025-10-13 08:35:00,325 | INFO     | all data control threads have been joined
[2025-10-13 04:36:07] 2025-10-13 08:35:00,401 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:36:07] 2025-10-13 08:35:00,401 | INFO     | aborting loop
[2025-10-13 04:36:07] 2025-10-13 08:35:00,661 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:36:07] 2025-10-13 08:35:01,222 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:36:07] 2025-10-13 08:35:01,252 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:36:07] 2025-10-13 08:35:01,256 | INFO     | [job] validate thread has finished
[2025-10-13 04:36:07] 2025-10-13 08:35:01,331 | INFO     | [data] control thread has finished
[2025-10-13 04:36:07] 2025-10-13 08:35:01,407 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:36:07] 2025-10-13 08:35:01,510 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:36:07] 2025-10-13 08:35:01,526 | INFO     | all payload control threads have been joined
[2025-10-13 04:36:07] 2025-10-13 08:35:01,658 | INFO     | all job control threads have been joined
[2025-10-13 04:36:07] 2025-10-13 08:35:01,666 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:36:07] 2025-10-13 08:35:01,907 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:36:07] 2025-10-13 08:35:01,976 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:36:07] 2025-10-13 08:35:02,177 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:36:07] 2025-10-13 08:35:02,219 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:36:07] 2025-10-13 08:35:02,239 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:36:07] 2025-10-13 08:35:02,299 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:36:07] 2025-10-13 08:35:02,532 | INFO     | [payload] control thread has finished
[2025-10-13 04:36:07] 2025-10-13 08:35:02,664 | INFO     | [job] control thread has finished
[2025-10-13 04:36:07] 2025-10-13 08:35:04,221 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:36:07] 2025-10-13 08:35:29,502 | INFO     | PID=2212726 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 04:36:07] 2025-10-13 08:35:29,503 | INFO     | .. there are 10 such processes running
[2025-10-13 04:36:07] 2025-10-13 08:35:29,504 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:36:07] 2025-10-13 08:35:29,504 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:36:07] 2025-10-13 08:35:29,504 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:36:07] 2025-10-13 08:35:58,742 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:36:07] 2025-10-13 08:36:00,784 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140276329719616)>', '<ExcThread(monitor, started 140275712259840)>']
[2025-10-13 04:36:07] 2025-10-13 08:36:01,766 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:36:07] 2025-10-13 08:36:01,766 | INFO     | [monitor] control thread has ended
[2025-10-13 04:36:07] 2025-10-13 08:36:05,812 | INFO     | all workflow threads have been joined
[2025-10-13 04:36:07] 2025-10-13 08:36:05,812 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:36:07] 2025-10-13 08:36:05,812 | INFO     | traces error code: 0
[2025-10-13 04:36:07] 2025-10-13 08:36:05,812 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:36:07] 2025-10-13 08:36:06,790 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:36:07] 2025-10-13 08:36:06,796 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:36:07] 2025-10-13 08:36:06,800 [wrapper] pilotpid: 2212726
[2025-10-13 04:36:07] 2025-10-13 08:36:06,819 [wrapper] Pilot exit status: 0
[2025-10-13 04:36:07] 2025-10-13 08:36:07,002 [wrapper] pandaids: 6840852617
[2025-10-13 04:36:07] 2025-10-13 08:36:07,070 [wrapper] cleanup supervisor_pilot 2600770 2212727
[2025-10-13 04:36:07] 2025-10-13 08:36:07,074 [wrapper] Test setup, not cleaning
[2025-10-13 04:36:07] 2025-10-13 08:36:07,077 [wrapper] apfmon messages muted
[2025-10-13 04:36:07] 2025-10-13 08:36:07,080 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:36:07] 2025-10-13 08:36:07,083 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:36:07]  *** Error codes and diagnostics ***
[2025-10-13 04:36:07]     "exeErrorCode": 0,
[2025-10-13 04:36:07]     "exeErrorDiag": "",
[2025-10-13 04:36:07]     "pilotErrorCode": 0,
[2025-10-13 04:36:07]     "pilotErrorDiag": "",
[2025-10-13 04:36:07]  *** Listing of results directory ***
[2025-10-13 04:36:07] total 420412
[2025-10-13 04:36:07] -rw-r--r--. 1 boincer umatlas    563267 Oct  7 03:02 pilot3.tar.gz
[2025-10-13 04:36:07] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 18:47 queuedata.json
[2025-10-13 04:36:07] -rwx------. 1 boincer umatlas     36292 Oct 12 18:47 runpilot2-wrapper.sh
[2025-10-13 04:36:07] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:36:07] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:10 run_atlas
[2025-10-13 04:36:07] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:10 job.xml
[2025-10-13 04:36:07] -rw-r--r--. 2 boincer umatlas 220055697 Oct 13 00:10 EVNT.46676267._004629.pool.root.1
[2025-10-13 04:36:07] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:10 start_atlas.sh
[2025-10-13 04:36:07] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:10 shared
[2025-10-13 04:36:07] -rw-r--r--. 2 boincer umatlas    576708 Oct 13 00:10 input.tar.gz
[2025-10-13 04:36:07] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:10 boinc_lockfile
[2025-10-13 04:36:07] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:10 pandaJob.out
[2025-10-13 04:36:07] -rw-------. 1 boincer umatlas    974373 Oct 13 00:11 agis_schedconf.cvmfs.json
[2025-10-13 04:36:07] drwx------. 4 boincer umatlas      4096 Oct 13 00:11 pilot3
[2025-10-13 04:36:07] -rw-r--r--. 1 boincer umatlas      6839 Oct 13 04:31 init_data.xml
[2025-10-13 04:36:07] -rw-------. 1 boincer umatlas 201431518 Oct 13 04:32 HITS.46676269._091446.pool.root.1
[2025-10-13 04:36:07] -rw-r--r--. 1 boincer umatlas       531 Oct 13 04:33 boinc_task_state.xml
[2025-10-13 04:36:07] -rw-------. 1 boincer umatlas      1058 Oct 13 04:34 memory_monitor_summary.json
[2025-10-13 04:36:07] -rw-------. 1 boincer umatlas   1560580 Oct 13 04:34 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:36:07] -rw-------. 1 boincer umatlas    500424 Oct 13 04:34 log.46676269._091446.job.log.tgz.1
[2025-10-13 04:36:07] -rw-------. 1 boincer umatlas      7828 Oct 13 04:34 heartbeat.json
[2025-10-13 04:36:07] -rw-------. 1 boincer umatlas        95 Oct 13 04:35 pilot_heartbeat.json
[2025-10-13 04:36:07] -rw-r--r--. 1 boincer umatlas        28 Oct 13 04:35 wrapper_checkpoint.txt
[2025-10-13 04:36:07] -rw-------. 1 boincer umatlas      4824 Oct 13 04:36 pilotlog.txt
[2025-10-13 04:36:07] -rw-------. 1 boincer umatlas   2049568 Oct 13 04:36 log.46676269._091446.job.log.1
[2025-10-13 04:36:07] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 04:36 boinc_mmap_file
[2025-10-13 04:36:07] -rw-------. 1 boincer umatlas       357 Oct 13 04:36 output.list
[2025-10-13 04:36:07] -rw-r--r--. 1 boincer umatlas       620 Oct 13 04:36 runtime_log
[2025-10-13 04:36:07] -rw-------. 1 boincer umatlas   2570240 Oct 13 04:36 result.tar.gz
[2025-10-13 04:36:07] -rw-r--r--. 1 boincer umatlas      8714 Oct 13 04:36 runtime_log.err
[2025-10-13 04:36:07] -rw-------. 1 boincer umatlas       658 Oct 13 04:36 RLLKDmw1JS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHvlNDmG0ZjVo.diag
[2025-10-13 04:36:07] -rw-r--r--. 1 boincer umatlas     21306 Oct 13 04:36 stderr.txt
[2025-10-13 04:36:07] HITS file was successfully produced:
[2025-10-13 04:36:07] -rw-------. 1 boincer umatlas 201431518 Oct 13 04:32 shared/HITS.pool.root.1
[2025-10-13 04:36:07]  *** Contents of shared directory: ***
[2025-10-13 04:36:07] total 414712
[2025-10-13 04:36:07] -rw-r--r--. 2 boincer umatlas 220055697 Oct 13 00:10 ATLAS.root_0
[2025-10-13 04:36:07] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:10 start_atlas.sh
[2025-10-13 04:36:07] -rw-r--r--. 2 boincer umatlas    576708 Oct 13 00:10 input.tar.gz
[2025-10-13 04:36:07] -rw-------. 1 boincer umatlas 201431518 Oct 13 04:32 HITS.pool.root.1
[2025-10-13 04:36:07] -rw-------. 1 boincer umatlas   2570240 Oct 13 04:36 result.tar.gz
04:36:29 (2206563): run_atlas exited; CPU time 47221.114741
04:36:29 (2206563): called boinc_finish(0)

</stderr_txt>
]]>

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