Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:58:54 (1316985): wrapper (7.7.26015): starting
07:58:54 (1316985): wrapper: running run_atlas (--nthreads 10)
[2025-10-13 07:58:54] Arguments: --nthreads 10
[2025-10-13 07:58:54] Threads: 10
[2025-10-13 07:58:54] Checking for CVMFS
[2025-10-13 07:58:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 07:58:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 07:58:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 07:58:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 07:58:54] 2.13.2.0 5344 45623 374180 151660 1 281 30075376 32935936 18375 16776704 0 116716730 99.607 121213596 31575 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 07:58:54] CVMFS is ok
[2025-10-13 07:58:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 07:58:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 07:58:54] Further information can be found at the LHC@home message board.
[2025-10-13 07:58:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:58:54] Checking for apptainer binary...
[2025-10-13 07:58:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 07:58:54] Running /usr/bin/apptainer --version
[2025-10-13 07:58:54] apptainer version 1.4.3-1.el9
[2025-10-13 07:58:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:58:54] c6-1-26-1.aglt2.org
[2025-10-13 07:58:54] apptainer works
[2025-10-13 07:58:54] Set ATHENA_PROC_NUMBER=10
[2025-10-13 07:58:54] Set ATHENA_CORE_NUMBER=10
[2025-10-13 07:58:54] Starting ATLAS job with PandaID=6840961490
[2025-10-13 07:58:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:54:28]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:54:28] 2025-10-13 15:46:37,365 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 12:54:28] 2025-10-13 15:46:37,366 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 12:54:28] 2025-10-13 15:46:37,366 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 12:54:28] 2025-10-13 15:46:37,370 | INFO     | fitting pss+swap vs Time
[2025-10-13 12:54:28] 2025-10-13 15:46:37,371 | INFO     | sum of square deviations: 3438851664.6726375
[2025-10-13 12:54:28] 2025-10-13 15:46:37,372 | INFO     | sum of deviations: -18270103402.69955
[2025-10-13 12:54:28] 2025-10-13 15:46:37,372 | INFO     | mean x: 1760363546.5695066
[2025-10-13 12:54:28] 2025-10-13 15:46:37,372 | INFO     | mean y: 2262234.3677130044
[2025-10-13 12:54:28] 2025-10-13 15:46:37,372 | INFO     | -- intersect: 9354809874.781702
[2025-10-13 12:54:28] 2025-10-13 15:46:37,373 | INFO     | intersect: 9354809874.781702
[2025-10-13 12:54:28] 2025-10-13 15:46:37,373 | INFO     | chi2: 2.327484892852486
[2025-10-13 12:54:28] 2025-10-13 15:46:37,373 | INFO     | sum of square deviations: 3212723839.6743035
[2025-10-13 12:54:28] 2025-10-13 15:46:37,375 | INFO     | sum of deviations: -3604984195.339447
[2025-10-13 12:54:28] 2025-10-13 15:46:37,375 | INFO     | mean x: 1760363394.0779817
[2025-10-13 12:54:28] 2025-10-13 15:46:37,375 | INFO     | mean y: 2271963.137614679
[2025-10-13 12:54:28] 2025-10-13 15:46:37,375 | INFO     | -- intersect: 1977568481.1067963
[2025-10-13 12:54:28] 2025-10-13 15:46:37,375 | INFO     | intersect: 1977568481.1067963
[2025-10-13 12:54:28] 2025-10-13 15:46:37,376 | INFO     | chi2: 1.6529843672811273
[2025-10-13 12:54:28] 2025-10-13 15:46:37,376 | INFO     | current chi2=1.6529843672811273 (change=28.97980251741672 %)
[2025-10-13 12:54:28] 2025-10-13 15:46:37,376 | INFO     | sum of square deviations: 2996722441.8121934
[2025-10-13 12:54:28] 2025-10-13 15:46:37,377 | INFO     | sum of deviations: -4104469006.8262997
[2025-10-13 12:54:28] 2025-10-13 15:46:37,378 | INFO     | mean x: 1760363241.5821595
[2025-10-13 12:54:28] 2025-10-13 15:46:37,378 | INFO     | mean y: 2271607.3615023475
[2025-10-13 12:54:28] 2025-10-13 15:46:37,378 | INFO     | -- intersect: 2413357887.831607
[2025-10-13 12:54:28] 2025-10-13 15:46:37,378 | INFO     | intersect: 2413357887.831607
[2025-10-13 12:54:28] 2025-10-13 15:46:37,378 | INFO     | chi2: 1.6508167743383226
[2025-10-13 12:54:28] 2025-10-13 15:46:37,378 | INFO     | current chi2=1.6508167743383226 (change=0.13113208967426462 %)
[2025-10-13 12:54:28] 2025-10-13 15:46:37,379 | INFO     | right removable region: 212
[2025-10-13 12:54:28] 2025-10-13 15:46:37,379 | INFO     | sum of square deviations: 3212659850.513761
[2025-10-13 12:54:28] 2025-10-13 15:46:37,380 | INFO     | sum of deviations: -43376498916.11926
[2025-10-13 12:54:28] 2025-10-13 15:46:37,380 | INFO     | mean x: 1760363699.082569
[2025-10-13 12:54:28] 2025-10-13 15:46:37,380 | INFO     | mean y: 2278923.7844036696
[2025-10-13 12:54:28] 2025-10-13 15:46:37,380 | INFO     | -- intersect: 23770252390.698334
[2025-10-13 12:54:28] 2025-10-13 15:46:37,381 | INFO     | intersect: 23770252390.698334
[2025-10-13 12:54:28] 2025-10-13 15:46:37,381 | INFO     | chi2: 1.0192139784571674
[2025-10-13 12:54:28] 2025-10-13 15:46:37,381 | INFO     | current chi2=1.0192139784571674 (change=56.20964150671441 %)
[2025-10-13 12:54:28] 2025-10-13 15:46:37,381 | INFO     | sum of square deviations: 2996607761.277009
[2025-10-13 12:54:28] 2025-10-13 15:46:37,383 | INFO     | sum of deviations: -31332731522.09861
[2025-10-13 12:54:28] 2025-10-13 15:46:37,383 | INFO     | mean x: 1760363851.596244
[2025-10-13 12:54:28] 2025-10-13 15:46:37,383 | INFO     | mean y: 2270409.1267605633
[2025-10-13 12:54:28] 2025-10-13 15:46:37,383 | INFO     | -- intersect: 18408752784.30666
[2025-10-13 12:54:28] 2025-10-13 15:46:37,383 | INFO     | intersect: 18408752784.30666
[2025-10-13 12:54:28] 2025-10-13 15:46:37,384 | INFO     | chi2: 0.9363854248493282
[2025-10-13 12:54:28] 2025-10-13 15:46:37,384 | INFO     | current chi2=0.9363854248493282 (change=8.126708950089242 %)
[2025-10-13 12:54:28] 2025-10-13 15:46:37,384 | INFO     | left removable region: 20
[2025-10-13 12:54:28] 2025-10-13 15:46:37,384 | INFO     | sum of square deviations: 2194800086.479172
[2025-10-13 12:54:28] 2025-10-13 15:46:37,385 | INFO     | sum of deviations: -662884706.7187498
[2025-10-13 12:54:28] 2025-10-13 15:46:37,385 | INFO     | mean x: 1760363821.1354167
[2025-10-13 12:54:28] 2025-10-13 15:46:37,385 | INFO     | mean y: 2266735.796875
[2025-10-13 12:54:28] 2025-10-13 15:46:37,386 | INFO     | -- intersect: 533940787.7892736
[2025-10-13 12:54:28] 2025-10-13 15:46:37,386 | INFO     | intersect: 533940787.7892736
[2025-10-13 12:54:28] 2025-10-13 15:46:37,386 | INFO     | chi2: 0.03853625693709898
[2025-10-13 12:54:28] 2025-10-13 15:46:37,386 | INFO     | -- intersect: 533940787.7892736
[2025-10-13 12:54:28] 2025-10-13 15:46:37,386 | INFO     | current memory leak: -0.30 B/s (using 192 data points, chi2=0.04)
[2025-10-13 12:54:28] 2025-10-13 15:46:37,387 | INFO     | could have reported an average CPU frequency of 2737 MHz (11 samples)
[2025-10-13 12:54:28] 2025-10-13 15:46:37,387 | INFO     | ..............................
[2025-10-13 12:54:28] 2025-10-13 15:46:37,387 | INFO     | . Timing measurements:
[2025-10-13 12:54:28] 2025-10-13 15:46:37,387 | INFO     | . get job = 0 s
[2025-10-13 12:54:28] 2025-10-13 15:46:37,387 | INFO     | . initial setup = 3 s
[2025-10-13 12:54:28] 2025-10-13 15:46:37,387 | INFO     | . payload setup = 6 s
[2025-10-13 12:54:28] 2025-10-13 15:46:37,387 | INFO     | . stage-in = 0 s
[2025-10-13 12:54:28] 2025-10-13 15:46:37,387 | INFO     | . payload execution = 13579 s
[2025-10-13 12:54:28] 2025-10-13 15:46:37,388 | INFO     | . stage-out = 7 s
[2025-10-13 12:54:28] 2025-10-13 15:46:37,388 | INFO     | . log creation = 1 s
[2025-10-13 12:54:28] 2025-10-13 15:46:37,388 | INFO     | ..............................
[2025-10-13 12:54:28] 2025-10-13 15:46:38,247 | INFO     | 
[2025-10-13 12:54:28] 2025-10-13 15:46:38,247 | INFO     | job summary report
[2025-10-13 12:54:28] 2025-10-13 15:46:38,247 | INFO     | --------------------------------------------------
[2025-10-13 12:54:28] 2025-10-13 15:46:38,247 | INFO     | PanDA job id: 6840961490
[2025-10-13 12:54:28] 2025-10-13 15:46:38,247 | INFO     | task id: 46676269
[2025-10-13 12:54:28] 2025-10-13 15:46:38,248 | INFO     | errors: (none)
[2025-10-13 12:54:28] 2025-10-13 15:46:38,248 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 12:54:28] 2025-10-13 15:46:38,248 | INFO     | pilot state: finished 
[2025-10-13 12:54:28] 2025-10-13 15:46:38,248 | INFO     | transexitcode: 0
[2025-10-13 12:54:28] 2025-10-13 15:46:38,248 | INFO     | exeerrorcode: 0
[2025-10-13 12:54:28] 2025-10-13 15:46:38,248 | INFO     | exeerrordiag: 
[2025-10-13 12:54:28] 2025-10-13 15:46:38,248 | INFO     | exitcode: 0
[2025-10-13 12:54:28] 2025-10-13 15:46:38,248 | INFO     | exitmsg: OK
[2025-10-13 12:54:28] 2025-10-13 15:46:38,248 | INFO     | cpuconsumptiontime: 43501 s
[2025-10-13 12:54:28] 2025-10-13 15:46:38,248 | INFO     | nevents: 400
[2025-10-13 12:54:28] 2025-10-13 15:46:38,248 | INFO     | neventsw: 0
[2025-10-13 12:54:28] 2025-10-13 15:46:38,248 | INFO     | pid: 1328951
[2025-10-13 12:54:28] 2025-10-13 15:46:38,248 | INFO     | pgrp: 1328951
[2025-10-13 12:54:28] 2025-10-13 15:46:38,248 | INFO     | corecount: 10
[2025-10-13 12:54:28] 2025-10-13 15:46:38,248 | INFO     | event service: False
[2025-10-13 12:54:28] 2025-10-13 15:46:38,249 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 13591: 2379240, 13601: 2388238, 13604: 2388294, 13635: 2388616}
[2025-10-13 12:54:28] 2025-10-13 15:46:38,249 | INFO     | --------------------------------------------------
[2025-10-13 12:54:28] 2025-10-13 15:46:38,249 | INFO     | 
[2025-10-13 12:54:28] 2025-10-13 15:46:38,249 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 12:54:28] 2025-10-13 15:46:38,355 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 12:54:28] 2025-10-13 15:46:38,355 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 12:54:28] 2025-10-13 15:46:38,355 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 12:54:28] 2025-10-13 15:46:38,355 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 12:54:28] 2025-10-13 15:46:38,355 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 12:54:28] 2025-10-13 15:46:38,356 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 12:54:28] 2025-10-13 15:46:38,356 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 12:54:28] 2025-10-13 15:46:38,356 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 12:54:28] 2025-10-13 15:46:38,356 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 12:54:28] 2025-10-13 15:46:38,356 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 12:54:28] 2025-10-13 15:46:38,356 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 12:54:28] 2025-10-13 15:46:38,356 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 12:54:28] 2025-10-13 15:46:38,356 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 12:54:28] 2025-10-13 15:46:38,356 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 12:54:28] 2025-10-13 15:46:38,356 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 12:54:28] 2025-10-13 15:46:38,356 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 12:54:28] 2025-10-13 15:46:38,357 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 12:54:28] 2025-10-13 15:46:38,357 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 12:54:28] 2025-10-13 15:46:38,357 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 12:54:28] 2025-10-13 15:46:38,357 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 12:54:28] 2025-10-13 15:46:38,357 | INFO     | job 6840961490 has completed (purged errors)
[2025-10-13 12:54:28] 2025-10-13 15:46:38,357 | INFO     | overall cleanup function is called
[2025-10-13 12:54:28] 2025-10-13 15:46:39,386 | INFO     | --- collectZombieJob: --- 10, [1328951]
[2025-10-13 12:54:28] 2025-10-13 15:46:39,386 | INFO     | zombie collector waiting for pid 1328951
[2025-10-13 12:54:28] 2025-10-13 15:46:39,386 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 12:54:28] 2025-10-13 15:46:39,386 | INFO     | collected zombie processes
[2025-10-13 12:54:28] 2025-10-13 15:46:39,387 | INFO     | will attempt to kill all subprocesses of pid=1328951
[2025-10-13 12:54:28] 2025-10-13 15:46:41,054 | INFO     | process IDs to be killed: [1328951] (in reverse order)
[2025-10-13 12:54:28] 2025-10-13 15:46:41,285 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 12:54:28] 2025-10-13 15:46:41,285 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 12:54:28] 2025-10-13 15:46:41,360 | INFO     | did not find any defunct processes belonging to 1328951
[2025-10-13 12:54:28] 2025-10-13 15:46:41,377 | INFO     | did not find any defunct processes belonging to 1328951
[2025-10-13 12:54:28] 2025-10-13 15:46:41,377 | INFO     | ready for new job
[2025-10-13 12:54:28] 2025-10-13 15:46:41,378 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 12:54:28] 2025-10-13 15:46:41,424 | INFO     | ***************************************
[2025-10-13 12:54:28] 2025-10-13 15:46:41,424 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 12:54:28] 2025-10-13 15:46:41,424 | INFO     | ***************************************
[2025-10-13 12:54:28] 2025-10-13 15:46:41,424 | INFO     | 
[2025-10-13 12:54:28] 2025-10-13 15:46:41,457 | INFO     | architecture information:
[2025-10-13 12:54:28] 2025-10-13 15:46:41,480 | INFO     | executing command: cat /etc/os-release
[2025-10-13 12:54:28] 2025-10-13 15:46:41,659 | INFO     | cat /etc/os-release:
[2025-10-13 12:54:28] NAME="CentOS Linux"
[2025-10-13 12:54:28] VERSION="7 (Core)"
[2025-10-13 12:54:28] ID="centos"
[2025-10-13 12:54:28] ID_LIKE="rhel fedora"
[2025-10-13 12:54:28] VERSION_ID="7"
[2025-10-13 12:54:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 12:54:28] ANSI_COLOR="0;31"
[2025-10-13 12:54:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 12:54:28] HOME_URL="https://www.centos.org/"
[2025-10-13 12:54:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 12:54:28] 
[2025-10-13 12:54:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 12:54:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 12:54:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 12:54:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 12:54:28] 
[2025-10-13 12:54:28] 2025-10-13 15:46:41,660 | INFO     | ***************************************
[2025-10-13 12:54:28] 2025-10-13 15:46:42,163 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 12:54:28] 2025-10-13 15:46:42,191 | INFO     | sufficient remaining disk space (75221696512 B)
[2025-10-13 12:54:28] 2025-10-13 15:46:42,191 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 12:54:28] 2025-10-13 15:46:42,192 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 12:54:28] 2025-10-13 15:46:42,192 | INFO     | update_server=False
[2025-10-13 12:54:28] 2025-10-13 15:46:42,192 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 12:54:28] 2025-10-13 15:46:42,192 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:54:28] 2025-10-13 15:46:42,192 | INFO     | aborting loop
[2025-10-13 12:54:28] 2025-10-13 15:46:42,502 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 12:54:28] 2025-10-13 15:46:42,662 | INFO     | all data control threads have been joined
[2025-10-13 12:54:28] 2025-10-13 15:46:42,873 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:54:28] 2025-10-13 15:46:42,983 | INFO     | all job control threads have been joined
[2025-10-13 12:54:28] 2025-10-13 15:46:43,198 | INFO     | [job] retrieve thread has finished
[2025-10-13 12:54:28] 2025-10-13 15:46:43,204 | INFO     | [job] job monitor thread has finished
[2025-10-13 12:54:28] 2025-10-13 15:46:43,438 | INFO     | all payload control threads have been joined
[2025-10-13 12:54:28] 2025-10-13 15:46:43,534 | INFO     | [payload] validate_post thread has finished
[2025-10-13 12:54:28] 2025-10-13 15:46:43,669 | INFO     | [data] control thread has finished
[2025-10-13 12:54:28] 2025-10-13 15:46:43,711 | INFO     | [job] validate thread has finished
[2025-10-13 12:54:28] 2025-10-13 15:46:43,720 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 12:54:28] 2025-10-13 15:46:43,724 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 12:54:28] 2025-10-13 15:46:43,870 | INFO     | [payload] failed_post thread has finished
[2025-10-13 12:54:28] 2025-10-13 15:46:43,880 | INFO     | [job] queue monitor thread has finished
[2025-10-13 12:54:28] 2025-10-13 15:46:44,003 | INFO     | [job] control thread has finished
[2025-10-13 12:54:28] 2025-10-13 15:46:44,117 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 12:54:28] 2025-10-13 15:46:44,444 | INFO     | [payload] control thread has finished
[2025-10-13 12:54:28] 2025-10-13 15:46:44,509 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:54:28] 2025-10-13 15:46:44,698 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:54:28] 2025-10-13 15:46:44,702 | INFO     | [data] copytool_in thread has finished
[2025-10-13 12:54:28] 2025-10-13 15:46:44,712 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 12:54:28] 2025-10-13 15:46:48,731 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:54:28] 2025-10-13 15:47:12,350 | INFO     | PID=1320707 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 12:54:28] 2025-10-13 15:47:12,350 | INFO     | .. there are 29 such processes running
[2025-10-13 12:54:28] 2025-10-13 15:47:12,386 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:54:28] 2025-10-13 15:47:12,386 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:54:28] 2025-10-13 15:47:12,386 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:54:28] 2025-10-13 15:47:32,344 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:54:28] 2025-10-13 15:47:33,254 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140533856827200)>', '<ExcThread(monitor, started 140533208971008)>']
[2025-10-13 12:54:28] 2025-10-13 15:47:33,654 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:54:28] 2025-10-13 15:47:33,654 | INFO     | [monitor] control thread has ended
[2025-10-13 12:54:28] 2025-10-13 15:47:38,280 | INFO     | all workflow threads have been joined
[2025-10-13 12:54:28] 2025-10-13 15:47:38,280 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:54:28] 2025-10-13 15:47:38,281 | INFO     | traces error code: 0
[2025-10-13 12:54:28] 2025-10-13 15:47:38,281 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:54:28] 2025-10-13 15:47:39,249 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:54:28] 2025-10-13 15:47:39,336 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:54:28] 2025-10-13 15:47:39,399 [wrapper] pilotpid: 1320707
[2025-10-13 12:54:28] 2025-10-13 15:47:39,420 [wrapper] Pilot exit status: 0
[2025-10-13 12:54:28] 2025-10-13 15:47:39,497 [wrapper] pandaids: 6840961490
[2025-10-13 12:54:28] 2025-10-13 15:47:40,184 [wrapper] cleanup supervisor_pilot 2079807 1320708
[2025-10-13 12:54:28] 2025-10-13 15:47:40,206 [wrapper] Test setup, not cleaning
[2025-10-13 12:54:28] 2025-10-13 15:47:40,245 [wrapper] apfmon messages muted
[2025-10-13 12:54:28] 2025-10-13 15:47:40,261 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:54:28] 2025-10-13 15:47:40,288 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:54:28]  *** Error codes and diagnostics ***
[2025-10-13 12:54:28]     "exeErrorCode": 0,
[2025-10-13 12:54:28]     "exeErrorDiag": "",
[2025-10-13 12:54:28]     "pilotErrorCode": 0,
[2025-10-13 12:54:28]     "pilotErrorDiag": "",
[2025-10-13 12:54:28]  *** Listing of results directory ***
[2025-10-13 12:54:28] total 414296
[2025-10-13 12:54:28] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 18:57 pilot3.tar.gz
[2025-10-13 12:54:28] -rwx------. 1 boincer umatlas     36292 Oct 12 19:00 runpilot2-wrapper.sh
[2025-10-13 12:54:28] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:00 queuedata.json
[2025-10-13 12:54:28] -rw-r--r--. 1 boincer umatlas       100 Oct 13 07:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:54:28] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 07:58 run_atlas
[2025-10-13 12:54:28] -rw-r--r--. 1 boincer umatlas       105 Oct 13 07:58 job.xml
[2025-10-13 12:54:28] -rw-r--r--. 2 boincer umatlas 219713259 Oct 13 07:58 EVNT.46676267._004641.pool.root.1
[2025-10-13 12:54:28] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 07:58 start_atlas.sh
[2025-10-13 12:54:28] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 07:58 shared
[2025-10-13 12:54:28] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 07:58 input.tar.gz
[2025-10-13 12:54:28] -rw-r--r--. 1 boincer umatlas         0 Oct 13 07:58 boinc_lockfile
[2025-10-13 12:54:28] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 07:58 pandaJob.out
[2025-10-13 12:54:28] -rw-------. 1 boincer umatlas    972497 Oct 13 07:59 agis_schedconf.cvmfs.json
[2025-10-13 12:54:28] drwx------. 5 boincer umatlas      4096 Oct 13 07:59 pilot3
[2025-10-13 12:54:28] -rw-------. 1 boincer umatlas 196329136 Oct 13 11:44 HITS.46676269._091791.pool.root.1
[2025-10-13 12:54:28] -rw-r--r--. 1 boincer umatlas       530 Oct 13 11:44 boinc_task_state.xml
[2025-10-13 12:54:28] -rw-------. 1 boincer umatlas      1044 Oct 13 11:45 memory_monitor_summary.json
[2025-10-13 12:54:28] -rw-------. 1 boincer umatlas   1560580 Oct 13 11:45 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:54:28] -rw-------. 1 boincer umatlas    481556 Oct 13 11:46 log.46676269._091791.job.log.tgz.1
[2025-10-13 12:54:28] -rw-------. 1 boincer umatlas      7827 Oct 13 11:46 heartbeat.json
[2025-10-13 12:54:28] -rw-------. 1 boincer umatlas        95 Oct 13 11:47 pilot_heartbeat.json
[2025-10-13 12:54:28] -rw-------. 1 boincer umatlas      4824 Oct 13 11:47 pilotlog.txt
[2025-10-13 12:54:28] -rw-------. 1 boincer umatlas   1669872 Oct 13 11:47 log.46676269._091791.job.log.1
[2025-10-13 12:54:28] -rw-------. 1 boincer umatlas       357 Oct 13 11:47 output.list
[2025-10-13 12:54:28] -rw-r--r--. 1 boincer umatlas       620 Oct 13 11:47 runtime_log
[2025-10-13 12:54:28] -rw-------. 1 boincer umatlas   2170880 Oct 13 11:47 result.tar.gz
[2025-10-13 12:54:28] -rw-r--r--. 1 boincer umatlas      8711 Oct 13 11:47 runtime_log.err
[2025-10-13 12:54:28] -rw-------. 1 boincer umatlas       657 Oct 13 11:47 Ka5KDmPEKS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqylNDmUNXKfm.diag
[2025-10-13 12:54:28] -rw-r--r--. 1 boincer umatlas        27 Oct 13 12:54 wrapper_checkpoint.txt
[2025-10-13 12:54:28] -rw-r--r--. 1 boincer umatlas      6842 Oct 13 12:54 init_data.xml
[2025-10-13 12:54:28] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 12:54 boinc_mmap_file
[2025-10-13 12:54:28] -rw-r--r--. 1 boincer umatlas     20727 Oct 13 12:54 stderr.txt
[2025-10-13 12:54:28] HITS file was successfully produced:
[2025-10-13 12:54:28] -rw-------. 1 boincer umatlas 196329136 Oct 13 11:44 shared/HITS.pool.root.1
[2025-10-13 12:54:28]  *** Contents of shared directory: ***
[2025-10-13 12:54:28] total 408992
[2025-10-13 12:54:28] -rw-r--r--. 2 boincer umatlas 219713259 Oct 13 07:58 ATLAS.root_0
[2025-10-13 12:54:28] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 07:58 start_atlas.sh
[2025-10-13 12:54:28] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 07:58 input.tar.gz
[2025-10-13 12:54:28] -rw-------. 1 boincer umatlas 196329136 Oct 13 11:44 HITS.pool.root.1
[2025-10-13 12:54:28] -rw-------. 1 boincer umatlas   2170880 Oct 13 11:47 result.tar.gz
12:54:30 (1316985): run_atlas exited; CPU time 43960.311289
12:54:30 (1316985): called boinc_finish(0)

</stderr_txt>
]]>

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