Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:51 (2738793): wrapper (7.7.26015): starting
00:01:51 (2738793): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:01:51] Arguments: --nthreads 12
[2025-10-13 00:01:51] Threads: 12
[2025-10-13 00:01:51] Checking for CVMFS
[2025-10-13 00:01:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:01:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:01:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:01:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:01:55] 2.13.2.0 1387712 19471 228856 151647 2 196 21344918 32935937 20214 16776704 0 47770868 99.633 45796740 29024 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:01:55] CVMFS is ok
[2025-10-13 00:01:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:01:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:01:55] Further information can be found at the LHC@home message board.
[2025-10-13 00:01:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:01:55] Checking for apptainer binary...
[2025-10-13 00:01:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:01:55] Running /usr/bin/apptainer --version
[2025-10-13 00:01:55] apptainer version 1.4.3-1.el9
[2025-10-13 00:01:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:01:56] c6-2-29-3.aglt2.org
[2025-10-13 00:01:56] apptainer works
[2025-10-13 00:01:56] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:01:56] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:01:57] Starting ATLAS job with PandaID=6841124433
[2025-10-13 00:01:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:13:23]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:13:23] 2025-10-13 09:12:34,470 | INFO     | chi2: 7.111459355323011
[2025-10-13 05:13:23] 2025-10-13 09:12:34,470 | INFO     | current chi2=7.111459355323011 (change=10.279656338597064 %)
[2025-10-13 05:13:23] 2025-10-13 09:12:34,470 | INFO     | right removable region: 294
[2025-10-13 05:13:23] 2025-10-13 09:12:34,471 | INFO     | sum of square deviations: 7960623530.081358
[2025-10-13 05:13:23] 2025-10-13 09:12:34,473 | INFO     | sum of deviations: 137494804672.36285
[2025-10-13 05:13:23] 2025-10-13 09:12:34,473 | INFO     | mean x: 1760337716.2847457
[2025-10-13 05:13:23] 2025-10-13 09:12:34,474 | INFO     | mean y: 2249152.7694915254
[2025-10-13 05:13:23] 2025-10-13 09:12:34,474 | INFO     | -- intersect: -30402063969.608597
[2025-10-13 05:13:23] 2025-10-13 09:12:34,474 | INFO     | intersect: -30402063969.608597
[2025-10-13 05:13:23] 2025-10-13 09:12:34,474 | INFO     | chi2: 4.090495313081468
[2025-10-13 05:13:23] 2025-10-13 09:12:34,474 | INFO     | current chi2=4.090495313081468 (change=48.39306155067553 %)
[2025-10-13 05:13:23] 2025-10-13 09:12:34,475 | INFO     | sum of square deviations: 7562664012.744804
[2025-10-13 05:13:23] 2025-10-13 09:12:34,485 | INFO     | sum of deviations: 81217580042.11035
[2025-10-13 05:13:23] 2025-10-13 09:12:34,486 | INFO     | mean x: 1760337868.786207
[2025-10-13 05:13:23] 2025-10-13 09:12:34,486 | INFO     | mean y: 2270689.227586207
[2025-10-13 05:13:23] 2025-10-13 09:12:34,486 | INFO     | -- intersect: -18902493758.63949
[2025-10-13 05:13:23] 2025-10-13 09:12:34,486 | INFO     | intersect: -18902493758.63949
[2025-10-13 05:13:23] 2025-10-13 09:12:34,486 | INFO     | chi2: 2.534630835466048
[2025-10-13 05:13:23] 2025-10-13 09:12:34,487 | INFO     | current chi2=2.534630835466048 (change=38.03608997276543 %)
[2025-10-13 05:13:23] 2025-10-13 09:12:34,487 | INFO     | sum of square deviations: 7178246065.101756
[2025-10-13 05:13:23] 2025-10-13 09:12:34,494 | INFO     | sum of deviations: 37096051351.80351
[2025-10-13 05:13:23] 2025-10-13 09:12:34,494 | INFO     | mean x: 1760338021.277193
[2025-10-13 05:13:23] 2025-10-13 09:12:34,494 | INFO     | mean y: 2288186.154385965
[2025-10-13 05:13:23] 2025-10-13 09:12:34,495 | INFO     | -- intersect: -9094862989.99511
[2025-10-13 05:13:23] 2025-10-13 09:12:34,495 | INFO     | intersect: -9094862989.99511
[2025-10-13 05:13:23] 2025-10-13 09:12:34,495 | INFO     | chi2: 1.6033883476342534
[2025-10-13 05:13:23] 2025-10-13 09:12:34,495 | INFO     | current chi2=1.6033883476342534 (change=36.74075430635897 %)
[2025-10-13 05:13:23] 2025-10-13 09:12:34,495 | INFO     | sum of square deviations: 6807067163.371398
[2025-10-13 05:13:23] 2025-10-13 09:12:34,505 | INFO     | sum of deviations: 5537660400.400017
[2025-10-13 05:13:23] 2025-10-13 09:12:34,505 | INFO     | mean x: 1760338173.7714286
[2025-10-13 05:13:23] 2025-10-13 09:12:34,506 | INFO     | mean y: 2301117.225
[2025-10-13 05:13:23] 2025-10-13 09:12:34,506 | INFO     | -- intersect: -1429762760.2494316
[2025-10-13 05:13:23] 2025-10-13 09:12:34,506 | INFO     | intersect: -1429762760.2494316
[2025-10-13 05:13:23] 2025-10-13 09:12:34,506 | INFO     | chi2: 1.075014519652001
[2025-10-13 05:13:23] 2025-10-13 09:12:34,506 | INFO     | current chi2=1.075014519652001 (change=32.953577887843 %)
[2025-10-13 05:13:23] 2025-10-13 09:12:34,507 | INFO     | sum of square deviations: 6448877480.545411
[2025-10-13 05:13:23] 2025-10-13 09:12:34,508 | INFO     | sum of deviations: -5911328347.818174
[2025-10-13 05:13:23] 2025-10-13 09:12:34,508 | INFO     | mean x: 1760338326.2727273
[2025-10-13 05:13:23] 2025-10-13 09:12:34,508 | INFO     | mean y: 2305959.0109090907
[2025-10-13 05:13:23] 2025-10-13 09:12:34,509 | INFO     | -- intersect: 1615910478.7492332
[2025-10-13 05:13:23] 2025-10-13 09:12:34,509 | INFO     | intersect: 1615910478.7492332
[2025-10-13 05:13:23] 2025-10-13 09:12:34,513 | INFO     | chi2: 0.9770944241819346
[2025-10-13 05:13:23] 2025-10-13 09:12:34,513 | INFO     | current chi2=0.9770944241819346 (change=9.108723061876836 %)
[2025-10-13 05:13:23] 2025-10-13 09:12:34,513 | INFO     | left removable region: 50
[2025-10-13 05:13:23] 2025-10-13 09:12:34,514 | INFO     | sum of square deviations: 4504685592.733617
[2025-10-13 05:13:23] 2025-10-13 09:12:34,515 | INFO     | sum of deviations: 4811079001.852476
[2025-10-13 05:13:23] 2025-10-13 09:12:34,515 | INFO     | mean x: 1760338905.7581968
[2025-10-13 05:13:23] 2025-10-13 09:12:34,515 | INFO     | mean y: 2321711.573770492
[2025-10-13 05:13:23] 2025-10-13 09:12:34,515 | INFO     | -- intersect: -1877749465.7129512
[2025-10-13 05:13:23] 2025-10-13 09:12:34,515 | INFO     | intersect: -1877749465.7129512
[2025-10-13 05:13:23] 2025-10-13 09:12:34,516 | INFO     | chi2: 0.1013286628017547
[2025-10-13 05:13:23] 2025-10-13 09:12:34,516 | INFO     | -- intersect: -1877749465.7129512
[2025-10-13 05:13:23] 2025-10-13 09:12:34,516 | INFO     | current memory leak: 1.07 B/s (using 244 data points, chi2=0.10)
[2025-10-13 05:13:23] 2025-10-13 09:12:34,516 | INFO     | could have reported an average CPU frequency of 2693 MHz (14 samples)
[2025-10-13 05:13:23] 2025-10-13 09:12:34,517 | INFO     | ..............................
[2025-10-13 05:13:23] 2025-10-13 09:12:34,517 | INFO     | . Timing measurements:
[2025-10-13 05:13:23] 2025-10-13 09:12:34,517 | INFO     | . get job = 0 s
[2025-10-13 05:13:23] 2025-10-13 09:12:34,521 | INFO     | . initial setup = 6 s
[2025-10-13 05:13:23] 2025-10-13 09:12:34,521 | INFO     | . payload setup = 60 s
[2025-10-13 05:13:23] 2025-10-13 09:12:34,521 | INFO     | . stage-in = 1 s
[2025-10-13 05:13:23] 2025-10-13 09:12:34,521 | INFO     | . payload execution = 18303 s
[2025-10-13 05:13:23] 2025-10-13 09:12:34,521 | INFO     | . stage-out = 5 s
[2025-10-13 05:13:23] 2025-10-13 09:12:34,521 | INFO     | . log creation = 0 s
[2025-10-13 05:13:23] 2025-10-13 09:12:34,521 | INFO     | ..............................
[2025-10-13 05:13:23] 2025-10-13 09:12:34,633 | INFO     | 
[2025-10-13 05:13:23] 2025-10-13 09:12:34,633 | INFO     | job summary report
[2025-10-13 05:13:23] 2025-10-13 09:12:34,633 | INFO     | --------------------------------------------------
[2025-10-13 05:13:23] 2025-10-13 09:12:34,633 | INFO     | PanDA job id: 6841124433
[2025-10-13 05:13:23] 2025-10-13 09:12:34,633 | INFO     | task id: 46676269
[2025-10-13 05:13:23] 2025-10-13 09:12:34,633 | INFO     | errors: (none)
[2025-10-13 05:13:23] 2025-10-13 09:12:34,633 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:13:23] 2025-10-13 09:12:34,633 | INFO     | pilot state: finished 
[2025-10-13 05:13:23] 2025-10-13 09:12:34,634 | INFO     | transexitcode: 0
[2025-10-13 05:13:23] 2025-10-13 09:12:34,634 | INFO     | exeerrorcode: 0
[2025-10-13 05:13:23] 2025-10-13 09:12:34,634 | INFO     | exeerrordiag: 
[2025-10-13 05:13:23] 2025-10-13 09:12:34,634 | INFO     | exitcode: 0
[2025-10-13 05:13:23] 2025-10-13 09:12:34,634 | INFO     | exitmsg: OK
[2025-10-13 05:13:23] 2025-10-13 09:12:34,634 | INFO     | cpuconsumptiontime: 43576 s
[2025-10-13 05:13:23] 2025-10-13 09:12:34,634 | INFO     | nevents: 400
[2025-10-13 05:13:23] 2025-10-13 09:12:34,634 | INFO     | neventsw: 0
[2025-10-13 05:13:23] 2025-10-13 09:12:34,634 | INFO     | pid: 2764481
[2025-10-13 05:13:23] 2025-10-13 09:12:34,634 | INFO     | pgrp: 2764481
[2025-10-13 05:13:23] 2025-10-13 09:12:34,634 | INFO     | corecount: 12
[2025-10-13 05:13:23] 2025-10-13 09:12:34,634 | INFO     | event service: False
[2025-10-13 05:13:23] 2025-10-13 09:12:34,634 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348913, 3: 2348913, 15: 2348941, 27: 2348969, 38: 2349125, 50: 2349415, 61: 2349443, 18368: 2381741, 18369: 2381740, 18375: 239
[2025-10-13 05:13:23] 2025-10-13 09:12:34,634 | INFO     | --------------------------------------------------
[2025-10-13 05:13:23] 2025-10-13 09:12:34,634 | INFO     | 
[2025-10-13 05:13:23] 2025-10-13 09:12:34,635 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 05:13:23] 2025-10-13 09:12:34,879 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:13:23] 2025-10-13 09:12:34,880 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:13:23] 2025-10-13 09:12:34,880 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:13:23] 2025-10-13 09:12:34,880 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:13:23] 2025-10-13 09:12:34,880 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:13:23] 2025-10-13 09:12:34,880 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:13:23] 2025-10-13 09:12:34,880 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:13:23] 2025-10-13 09:12:34,880 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:13:23] 2025-10-13 09:12:34,880 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:13:23] 2025-10-13 09:12:34,880 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:13:23] 2025-10-13 09:12:34,880 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:13:23] 2025-10-13 09:12:34,880 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:13:23] 2025-10-13 09:12:34,881 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:13:23] 2025-10-13 09:12:34,881 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:13:23] 2025-10-13 09:12:34,881 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:13:23] 2025-10-13 09:12:34,881 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:13:23] 2025-10-13 09:12:34,881 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:13:23] 2025-10-13 09:12:34,881 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:13:23] 2025-10-13 09:12:34,881 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:13:23] 2025-10-13 09:12:34,881 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:13:23] 2025-10-13 09:12:34,881 | INFO     | job 6841124433 has completed (purged errors)
[2025-10-13 05:13:23] 2025-10-13 09:12:34,881 | INFO     | overall cleanup function is called
[2025-10-13 05:13:23] 2025-10-13 09:12:35,928 | INFO     | --- collectZombieJob: --- 10, [2764481]
[2025-10-13 05:13:23] 2025-10-13 09:12:35,928 | INFO     | zombie collector waiting for pid 2764481
[2025-10-13 05:13:23] 2025-10-13 09:12:35,928 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:13:23] 2025-10-13 09:12:35,929 | INFO     | collected zombie processes
[2025-10-13 05:13:23] 2025-10-13 09:12:35,929 | INFO     | will attempt to kill all subprocesses of pid=2764481
[2025-10-13 05:13:23] 2025-10-13 09:12:38,841 | INFO     | process IDs to be killed: [2764481] (in reverse order)
[2025-10-13 05:13:23] 2025-10-13 09:12:39,055 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:13:23] 2025-10-13 09:12:39,055 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:13:23] 2025-10-13 09:12:39,088 | INFO     | did not find any defunct processes belonging to 2764481
[2025-10-13 05:13:23] 2025-10-13 09:12:39,105 | INFO     | did not find any defunct processes belonging to 2764481
[2025-10-13 05:13:23] 2025-10-13 09:12:39,106 | INFO     | ready for new job
[2025-10-13 05:13:23] 2025-10-13 09:12:39,106 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:13:23] 2025-10-13 09:12:39,110 | INFO     | ***************************************
[2025-10-13 05:13:23] 2025-10-13 09:12:39,110 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:13:23] 2025-10-13 09:12:39,110 | INFO     | ***************************************
[2025-10-13 05:13:23] 2025-10-13 09:12:39,111 | INFO     | 
[2025-10-13 05:13:23] 2025-10-13 09:12:39,128 | INFO     | architecture information:
[2025-10-13 05:13:23] 2025-10-13 09:12:39,129 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:13:23] 2025-10-13 09:12:39,153 | INFO     | cat /etc/os-release:
[2025-10-13 05:13:23] NAME="CentOS Linux"
[2025-10-13 05:13:23] VERSION="7 (Core)"
[2025-10-13 05:13:23] ID="centos"
[2025-10-13 05:13:23] ID_LIKE="rhel fedora"
[2025-10-13 05:13:23] VERSION_ID="7"
[2025-10-13 05:13:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:13:23] ANSI_COLOR="0;31"
[2025-10-13 05:13:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:13:23] HOME_URL="https://www.centos.org/"
[2025-10-13 05:13:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:13:23] 
[2025-10-13 05:13:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:13:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:13:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:13:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:13:23] 
[2025-10-13 05:13:23] 2025-10-13 09:12:39,154 | INFO     | ***************************************
[2025-10-13 05:13:23] 2025-10-13 09:12:39,657 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 05:13:23] 2025-10-13 09:12:39,776 | INFO     | sufficient remaining disk space (75425120256 B)
[2025-10-13 05:13:23] 2025-10-13 09:12:39,776 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:13:23] 2025-10-13 09:12:39,776 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:13:23] 2025-10-13 09:12:39,776 | INFO     | update_server=False
[2025-10-13 05:13:23] 2025-10-13 09:12:39,776 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:13:23] 2025-10-13 09:12:39,791 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:13:23] 2025-10-13 09:12:39,791 | INFO     | aborting loop
[2025-10-13 05:13:23] 2025-10-13 09:12:39,798 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:13:23] 2025-10-13 09:12:40,021 | INFO     | all payload control threads have been joined
[2025-10-13 05:13:23] 2025-10-13 09:12:40,468 | INFO     | all data control threads have been joined
[2025-10-13 05:13:23] 2025-10-13 09:12:40,568 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:13:23] 2025-10-13 09:12:40,782 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:13:23] 2025-10-13 09:12:40,797 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:13:23] 2025-10-13 09:12:40,804 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:13:23] 2025-10-13 09:12:40,846 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:13:23] 2025-10-13 09:12:40,993 | INFO     | all job control threads have been joined
[2025-10-13 05:13:23] 2025-10-13 09:12:41,027 | INFO     | [payload] control thread has finished
[2025-10-13 05:13:23] 2025-10-13 09:12:41,087 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:13:23] 2025-10-13 09:12:41,133 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:13:23] 2025-10-13 09:12:41,474 | INFO     | [data] control thread has finished
[2025-10-13 05:13:23] 2025-10-13 09:12:41,999 | INFO     | [job] control thread has finished
[2025-10-13 05:13:23] 2025-10-13 09:12:42,088 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:13:23] 2025-10-13 09:12:42,144 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:13:23] 2025-10-13 09:12:42,210 | INFO     | [job] validate thread has finished
[2025-10-13 05:13:23] 2025-10-13 09:12:42,247 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:13:23] 2025-10-13 09:12:42,311 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:13:23] 2025-10-13 09:12:42,320 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:13:23] 2025-10-13 09:12:42,585 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:13:23] 2025-10-13 09:12:45,143 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:13:23] 2025-10-13 09:13:05,459 | INFO     | 18538s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-13 05:13:23] 2025-10-13 09:13:08,743 | INFO     | PID=2746423 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:13:23] 2025-10-13 09:13:08,743 | INFO     | .. there are 19 such processes running
[2025-10-13 05:13:23] 2025-10-13 09:13:08,743 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:13:23] 2025-10-13 09:13:08,743 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:13:23] 2025-10-13 09:13:08,744 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:13:23] 2025-10-13 09:13:16,935 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:13:23] 2025-10-13 09:13:17,146 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140698739783488)>', '<ExcThread(monitor, started 140697944446720)>']
[2025-10-13 05:13:23] 2025-10-13 09:13:17,797 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:13:23] 2025-10-13 09:13:17,797 | INFO     | [monitor] control thread has ended
[2025-10-13 05:13:23] 2025-10-13 09:13:22,173 | INFO     | all workflow threads have been joined
[2025-10-13 05:13:23] 2025-10-13 09:13:22,173 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:13:23] 2025-10-13 09:13:22,174 | INFO     | traces error code: 0
[2025-10-13 05:13:23] 2025-10-13 09:13:22,174 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:13:23] 2025-10-13 09:13:22,574 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:13:23] 2025-10-13 09:13:22,579 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:13:23] 2025-10-13 09:13:22,582 [wrapper] pilotpid: 2746423
[2025-10-13 05:13:23] 2025-10-13 09:13:22,601 [wrapper] Pilot exit status: 0
[2025-10-13 05:13:23] 2025-10-13 09:13:22,764 [wrapper] pandaids: 6841124433
[2025-10-13 05:13:23] 2025-10-13 09:13:22,872 [wrapper] cleanup supervisor_pilot 3637485 2746424
[2025-10-13 05:13:23] 2025-10-13 09:13:22,898 [wrapper] Test setup, not cleaning
[2025-10-13 05:13:23] 2025-10-13 09:13:22,901 [wrapper] apfmon messages muted
[2025-10-13 05:13:23] 2025-10-13 09:13:22,925 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:13:23] 2025-10-13 09:13:22,928 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:13:23]  *** Error codes and diagnostics ***
[2025-10-13 05:13:23]     "exeErrorCode": 0,
[2025-10-13 05:13:23]     "exeErrorDiag": "",
[2025-10-13 05:13:23]     "pilotErrorCode": 0,
[2025-10-13 05:13:23]     "pilotErrorDiag": "",
[2025-10-13 05:13:23]  *** Listing of results directory ***
[2025-10-13 05:13:23] total 410892
[2025-10-13 05:13:23] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 21:18 pilot3.tar.gz
[2025-10-13 05:13:23] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 21:49 queuedata.json
[2025-10-13 05:13:23] -rwx------. 1 boincer umatlas     36292 Oct 12 21:49 runpilot2-wrapper.sh
[2025-10-13 05:13:23] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:13:23] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:01 run_atlas
[2025-10-13 05:13:23] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:01 job.xml
[2025-10-13 05:13:23] -rw-r--r--. 2 boincer umatlas 219765346 Oct 13 00:01 EVNT.46676267._004366.pool.root.1
[2025-10-13 05:13:23] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:01 start_atlas.sh
[2025-10-13 05:13:23] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:01 shared
[2025-10-13 05:13:23] -rw-r--r--. 2 boincer umatlas    569685 Oct 13 00:01 input.tar.gz
[2025-10-13 05:13:23] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:01 boinc_lockfile
[2025-10-13 05:13:23] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:01 pandaJob.out
[2025-10-13 05:13:23] -rw-------. 1 boincer umatlas    974373 Oct 13 00:03 agis_schedconf.cvmfs.json
[2025-10-13 05:13:23] drwx------. 5 boincer umatlas      4096 Oct 13 00:03 pilot3
[2025-10-13 05:13:23] -rw-------. 1 boincer umatlas 191308793 Oct 13 05:10 HITS.46676269._094341.pool.root.1
[2025-10-13 05:13:23] -rw-r--r--. 1 boincer umatlas       531 Oct 13 05:10 boinc_task_state.xml
[2025-10-13 05:13:23] -rw-r--r--. 1 boincer umatlas      6843 Oct 13 05:10 init_data.xml
[2025-10-13 05:13:23] -rw-------. 1 boincer umatlas      1042 Oct 13 05:11 memory_monitor_summary.json
[2025-10-13 05:13:23] -rw-------. 1 boincer umatlas   1560580 Oct 13 05:11 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:13:23] -rw-------. 1 boincer umatlas    570503 Oct 13 05:11 log.46676269._094341.job.log.tgz.1
[2025-10-13 05:13:23] -rw-------. 1 boincer umatlas        95 Oct 13 05:12 pilot_heartbeat.json
[2025-10-13 05:13:23] -rw-------. 1 boincer umatlas      7831 Oct 13 05:12 heartbeat.json
[2025-10-13 05:13:23] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 05:13 boinc_mmap_file
[2025-10-13 05:13:23] -rw-r--r--. 1 boincer umatlas        28 Oct 13 05:13 wrapper_checkpoint.txt
[2025-10-13 05:13:23] -rw-------. 1 boincer umatlas      4940 Oct 13 05:13 pilotlog.txt
[2025-10-13 05:13:23] -rw-------. 1 boincer umatlas   2317324 Oct 13 05:13 log.46676269._094341.job.log.1
[2025-10-13 05:13:23] -rw-------. 1 boincer umatlas       357 Oct 13 05:13 output.list
[2025-10-13 05:13:23] -rw-r--r--. 1 boincer umatlas       620 Oct 13 05:13 runtime_log
[2025-10-13 05:13:23] -rw-------. 1 boincer umatlas   2908160 Oct 13 05:13 result.tar.gz
[2025-10-13 05:13:23] -rw-r--r--. 1 boincer umatlas      8711 Oct 13 05:13 runtime_log.err
[2025-10-13 05:13:23] -rw-------. 1 boincer umatlas       657 Oct 13 05:13 lYeLDmsrMS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm2TVMDmvnQe7m.diag
[2025-10-13 05:13:23] -rw-r--r--. 1 boincer umatlas     21096 Oct 13 05:13 stderr.txt
[2025-10-13 05:13:23] HITS file was successfully produced:
[2025-10-13 05:13:23] -rw-------. 1 boincer umatlas 191308793 Oct 13 05:10 shared/HITS.pool.root.1
[2025-10-13 05:13:23]  *** Contents of shared directory: ***
[2025-10-13 05:13:23] total 404868
[2025-10-13 05:13:23] -rw-r--r--. 2 boincer umatlas 219765346 Oct 13 00:01 ATLAS.root_0
[2025-10-13 05:13:23] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:01 start_atlas.sh
[2025-10-13 05:13:23] -rw-r--r--. 2 boincer umatlas    569685 Oct 13 00:01 input.tar.gz
[2025-10-13 05:13:23] -rw-------. 1 boincer umatlas 191308793 Oct 13 05:10 HITS.pool.root.1
[2025-10-13 05:13:23] -rw-------. 1 boincer umatlas   2908160 Oct 13 05:13 result.tar.gz
05:13:45 (2738793): run_atlas exited; CPU time 44085.990647
05:13:45 (2738793): called boinc_finish(0)

</stderr_txt>
]]>

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