Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:11:43 (522389): wrapper (7.7.26015): starting
00:11:43 (522389): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 00:11:43] Arguments: --nthreads 8
[2025-10-13 00:11:43] Threads: 8
[2025-10-13 00:11:43] Checking for CVMFS
[2025-10-13 00:11:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:11:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:11:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:11:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:11:46] 2.13.2.0 1071838 130204 798820 151594 -1933 964 27610110 32935937 23150 16776704 0 106144983 99.672 91624553 24335 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:11:46] CVMFS is ok
[2025-10-13 00:11:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:11:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:11:46] Further information can be found at the LHC@home message board.
[2025-10-13 00:11:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:11:46] Checking for apptainer binary...
[2025-10-13 00:11:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:11:46] Running /usr/bin/apptainer --version
[2025-10-13 00:11:46] apptainer version 1.4.3-1.el9
[2025-10-13 00:11:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:11:47] c-8-39.aglt2.org
[2025-10-13 00:11:47] apptainer works
[2025-10-13 00:11:47] Set ATHENA_PROC_NUMBER=8
[2025-10-13 00:11:47] Set ATHENA_CORE_NUMBER=8
[2025-10-13 00:11:47] Starting ATLAS job with PandaID=6840853918
[2025-10-13 00:11:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:03:19]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:03:19] 2025-10-13 13:02:34,768 | INFO     | sum of deviations: 636228670194.6935
[2025-10-13 09:03:19] 2025-10-13 13:02:34,768 | INFO     | mean x: 1760344573.9550781
[2025-10-13 09:03:19] 2025-10-13 13:02:34,769 | INFO     | mean y: 2152453.248046875
[2025-10-13 09:03:19] 2025-10-13 13:02:34,769 | INFO     | -- intersect: -26909449039.925606
[2025-10-13 09:03:19] 2025-10-13 13:02:34,769 | INFO     | intersect: -26909449039.925606
[2025-10-13 09:03:19] 2025-10-13 13:02:34,770 | INFO     | chi2: 5.838075804914196
[2025-10-13 09:03:19] 2025-10-13 13:02:34,770 | INFO     | current chi2=5.838075804914196 (change=11.593009531002634 %)
[2025-10-13 09:03:19] 2025-10-13 13:02:34,770 | INFO     | right removable region: 511
[2025-10-13 09:03:19] 2025-10-13 13:02:34,787 | INFO     | sum of square deviations: 41617101462.2948
[2025-10-13 09:03:19] 2025-10-13 13:02:34,849 | INFO     | sum of deviations: 482520753474.03284
[2025-10-13 09:03:19] 2025-10-13 13:02:34,850 | INFO     | mean x: 1760344878.9628906
[2025-10-13 09:03:19] 2025-10-13 13:02:34,850 | INFO     | mean y: 2167106.265625
[2025-10-13 09:03:19] 2025-10-13 13:02:34,850 | INFO     | -- intersect: -20407782350.23101
[2025-10-13 09:03:19] 2025-10-13 13:02:34,851 | INFO     | intersect: -20407782350.23101
[2025-10-13 09:03:19] 2025-10-13 13:02:34,852 | INFO     | chi2: 3.304703178125654
[2025-10-13 09:03:19] 2025-10-13 13:02:34,852 | INFO     | current chi2=3.304703178125654 (change=49.95630887055363 %)
[2025-10-13 09:03:19] 2025-10-13 13:02:34,853 | INFO     | sum of square deviations: 40409695703.99994
[2025-10-13 09:03:19] 2025-10-13 13:02:34,923 | INFO     | sum of deviations: 403866221828.07684
[2025-10-13 09:03:19] 2025-10-13 13:02:34,923 | INFO     | mean x: 1760345031.4615386
[2025-10-13 09:03:19] 2025-10-13 13:02:34,923 | INFO     | mean y: 2177032.2090729782
[2025-10-13 09:03:19] 2025-10-13 13:02:34,923 | INFO     | -- intersect: -17591221893.084644
[2025-10-13 09:03:19] 2025-10-13 13:02:34,924 | INFO     | intersect: -17591221893.084644
[2025-10-13 09:03:19] 2025-10-13 13:02:34,925 | INFO     | chi2: 2.3352434983247417
[2025-10-13 09:03:19] 2025-10-13 13:02:34,925 | INFO     | current chi2=2.3352434983247417 (change=29.33575657317478 %)
[2025-10-13 09:03:19] 2025-10-13 13:02:34,946 | INFO     | sum of square deviations: 39225810051.354645
[2025-10-13 09:03:19] 2025-10-13 13:02:35,004 | INFO     | sum of deviations: 337836427874.2113
[2025-10-13 09:03:19] 2025-10-13 13:02:35,004 | INFO     | mean x: 1760345183.9641435
[2025-10-13 09:03:19] 2025-10-13 13:02:35,004 | INFO     | mean y: 2185536.456175299
[2025-10-13 09:03:19] 2025-10-13 13:02:35,004 | INFO     | -- intersect: -15158973098.570652
[2025-10-13 09:03:19] 2025-10-13 13:02:35,005 | INFO     | intersect: -15158973098.570652
[2025-10-13 09:03:19] 2025-10-13 13:02:35,021 | INFO     | chi2: 1.7143163312916312
[2025-10-13 09:03:19] 2025-10-13 13:02:35,021 | INFO     | current chi2=1.7143163312916312 (change=26.589397100497298 %)
[2025-10-13 09:03:19] 2025-10-13 13:02:35,022 | INFO     | sum of square deviations: 38065334183.56141
[2025-10-13 09:03:19] 2025-10-13 13:02:35,071 | INFO     | sum of deviations: 291938551198.0884
[2025-10-13 09:03:19] 2025-10-13 13:02:35,071 | INFO     | mean x: 1760345336.4627767
[2025-10-13 09:03:19] 2025-10-13 13:02:35,071 | INFO     | mean y: 2191559.3561368207
[2025-10-13 09:03:19] 2025-10-13 13:02:35,071 | INFO     | -- intersect: -13498613783.821138
[2025-10-13 09:03:19] 2025-10-13 13:02:35,072 | INFO     | intersect: -13498613783.821138
[2025-10-13 09:03:19] 2025-10-13 13:02:35,097 | INFO     | chi2: 1.41411232621198
[2025-10-13 09:03:19] 2025-10-13 13:02:35,097 | INFO     | current chi2=1.41411232621198 (change=17.511587540758374 %)
[2025-10-13 09:03:19] 2025-10-13 13:02:35,097 | INFO     | left removable region: 40
[2025-10-13 09:03:19] 2025-10-13 13:02:35,098 | INFO     | sum of square deviations: 32398077178.369625
[2025-10-13 09:03:19] 2025-10-13 13:02:35,195 | INFO     | sum of deviations: 226147177523.17865
[2025-10-13 09:03:19] 2025-10-13 13:02:35,195 | INFO     | mean x: 1760345763.44586
[2025-10-13 09:03:19] 2025-10-13 13:02:35,195 | INFO     | mean y: 2205712.0658174097
[2025-10-13 09:03:19] 2025-10-13 13:02:35,196 | INFO     | -- intersect: -12285474932.572979
[2025-10-13 09:03:19] 2025-10-13 13:02:35,196 | INFO     | intersect: -12285474932.572979
[2025-10-13 09:03:19] 2025-10-13 13:02:35,197 | INFO     | chi2: 0.4185776890970556
[2025-10-13 09:03:19] 2025-10-13 13:02:35,197 | INFO     | -- intersect: -12285474932.572979
[2025-10-13 09:03:19] 2025-10-13 13:02:35,197 | INFO     | current memory leak: 6.98 B/s (using 471 data points, chi2=0.42)
[2025-10-13 09:03:19] 2025-10-13 13:02:35,225 | INFO     | could have reported an average CPU frequency of 2637 MHz (21 samples)
[2025-10-13 09:03:19] 2025-10-13 13:02:35,226 | INFO     | ..............................
[2025-10-13 09:03:19] 2025-10-13 13:02:35,226 | INFO     | . Timing measurements:
[2025-10-13 09:03:19] 2025-10-13 13:02:35,226 | INFO     | . get job = 0 s
[2025-10-13 09:03:19] 2025-10-13 13:02:35,226 | INFO     | . initial setup = 6 s
[2025-10-13 09:03:19] 2025-10-13 13:02:35,226 | INFO     | . payload setup = 53 s
[2025-10-13 09:03:19] 2025-10-13 13:02:35,226 | INFO     | . stage-in = 0 s
[2025-10-13 09:03:19] 2025-10-13 13:02:35,226 | INFO     | . payload execution = 31549 s
[2025-10-13 09:03:19] 2025-10-13 13:02:35,227 | INFO     | . stage-out = 12 s
[2025-10-13 09:03:19] 2025-10-13 13:02:35,227 | INFO     | . log creation = 2 s
[2025-10-13 09:03:19] 2025-10-13 13:02:35,227 | INFO     | ..............................
[2025-10-13 09:03:19] 2025-10-13 13:02:35,254 | INFO     | monitor loop #1750: job 0:6840853918 is in state 'finished'
[2025-10-13 09:03:19] 2025-10-13 13:02:35,268 | WARNING  | exception caught: deque index out of range
[2025-10-13 09:03:19] 2025-10-13 13:02:35,649 | INFO     | time since job start (31763s) is within the limit (172800.0s)
[2025-10-13 09:03:19] 2025-10-13 13:02:35,649 | INFO     | 31769s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-13 09:03:19] 2025-10-13 13:02:35,657 | INFO     | 
[2025-10-13 09:03:19] 2025-10-13 13:02:35,657 | INFO     | job summary report
[2025-10-13 09:03:19] 2025-10-13 13:02:35,657 | INFO     | --------------------------------------------------
[2025-10-13 09:03:19] 2025-10-13 13:02:35,657 | INFO     | PanDA job id: 6840853918
[2025-10-13 09:03:19] 2025-10-13 13:02:35,657 | INFO     | task id: 46676269
[2025-10-13 09:03:19] 2025-10-13 13:02:35,657 | INFO     | errors: (none)
[2025-10-13 09:03:19] 2025-10-13 13:02:35,658 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:03:19] 2025-10-13 13:02:35,658 | INFO     | pilot state: finished 
[2025-10-13 09:03:19] 2025-10-13 13:02:35,658 | INFO     | transexitcode: 0
[2025-10-13 09:03:19] 2025-10-13 13:02:35,658 | INFO     | exeerrorcode: 0
[2025-10-13 09:03:19] 2025-10-13 13:02:35,658 | INFO     | exeerrordiag: 
[2025-10-13 09:03:19] 2025-10-13 13:02:35,658 | INFO     | exitcode: 0
[2025-10-13 09:03:19] 2025-10-13 13:02:35,658 | INFO     | exitmsg: OK
[2025-10-13 09:03:19] 2025-10-13 13:02:35,658 | INFO     | cpuconsumptiontime: 55177 s
[2025-10-13 09:03:19] 2025-10-13 13:02:35,659 | INFO     | nevents: 400
[2025-10-13 09:03:19] 2025-10-13 13:02:35,659 | INFO     | neventsw: 0
[2025-10-13 09:03:19] 2025-10-13 13:02:35,659 | INFO     | pid: 540089
[2025-10-13 09:03:19] 2025-10-13 13:02:35,659 | INFO     | pgrp: 540089
[2025-10-13 09:03:19] 2025-10-13 13:02:35,659 | INFO     | corecount: 8
[2025-10-13 09:03:19] 2025-10-13 13:02:35,659 | INFO     | event service: False
[2025-10-13 09:03:19] 2025-10-13 13:02:35,659 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348742, 3: 2348941, 14: 2348941, 26: 2348969, 37: 2349125, 48: 2349355, 50: 2349443, 60: 2349471, 31608: 2387793, 31609: 238807
[2025-10-13 09:03:19] 2025-10-13 13:02:35,659 | INFO     | --------------------------------------------------
[2025-10-13 09:03:19] 2025-10-13 13:02:35,659 | INFO     | 
[2025-10-13 09:03:19] 2025-10-13 13:02:35,660 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-13 09:03:19] 2025-10-13 13:02:36,005 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:03:19] 2025-10-13 13:02:36,005 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:03:19] 2025-10-13 13:02:36,006 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:03:19] 2025-10-13 13:02:36,006 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:03:19] 2025-10-13 13:02:36,006 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:03:19] 2025-10-13 13:02:36,006 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:03:19] 2025-10-13 13:02:36,006 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:03:19] 2025-10-13 13:02:36,006 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:03:19] 2025-10-13 13:02:36,006 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:03:19] 2025-10-13 13:02:36,006 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:03:19] 2025-10-13 13:02:36,007 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:03:19] 2025-10-13 13:02:36,007 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:03:19] 2025-10-13 13:02:36,007 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:03:19] 2025-10-13 13:02:36,007 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:03:19] 2025-10-13 13:02:36,007 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:03:19] 2025-10-13 13:02:36,007 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:03:19] 2025-10-13 13:02:36,007 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:03:19] 2025-10-13 13:02:36,007 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:03:19] 2025-10-13 13:02:36,008 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:03:19] 2025-10-13 13:02:36,008 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:03:19] 2025-10-13 13:02:36,008 | INFO     | job 6840853918 has completed (purged errors)
[2025-10-13 09:03:19] 2025-10-13 13:02:36,008 | INFO     | overall cleanup function is called
[2025-10-13 09:03:19] 2025-10-13 13:02:37,059 | INFO     | --- collectZombieJob: --- 10, [540089]
[2025-10-13 09:03:19] 2025-10-13 13:02:37,059 | INFO     | zombie collector waiting for pid 540089
[2025-10-13 09:03:19] 2025-10-13 13:02:37,059 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:03:19] 2025-10-13 13:02:37,059 | INFO     | collected zombie processes
[2025-10-13 09:03:19] 2025-10-13 13:02:37,059 | INFO     | will attempt to kill all subprocesses of pid=540089
[2025-10-13 09:03:19] 2025-10-13 13:02:39,545 | INFO     | process IDs to be killed: [540089] (in reverse order)
[2025-10-13 09:03:19] 2025-10-13 13:02:40,029 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:03:19] 2025-10-13 13:02:40,029 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:03:19] 2025-10-13 13:02:40,065 | INFO     | did not find any defunct processes belonging to 540089
[2025-10-13 09:03:19] 2025-10-13 13:02:40,170 | INFO     | did not find any defunct processes belonging to 540089
[2025-10-13 09:03:19] 2025-10-13 13:02:40,171 | INFO     | ready for new job
[2025-10-13 09:03:19] 2025-10-13 13:02:40,171 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:03:19] 2025-10-13 13:02:40,197 | INFO     | ***************************************
[2025-10-13 09:03:19] 2025-10-13 13:02:40,227 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:03:19] 2025-10-13 13:02:40,227 | INFO     | ***************************************
[2025-10-13 09:03:19] 2025-10-13 13:02:40,227 | INFO     | 
[2025-10-13 09:03:19] 2025-10-13 13:02:40,253 | INFO     | architecture information:
[2025-10-13 09:03:19] 2025-10-13 13:02:40,265 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:03:19] 2025-10-13 13:02:40,488 | INFO     | cat /etc/os-release:
[2025-10-13 09:03:19] NAME="CentOS Linux"
[2025-10-13 09:03:19] VERSION="7 (Core)"
[2025-10-13 09:03:19] ID="centos"
[2025-10-13 09:03:19] ID_LIKE="rhel fedora"
[2025-10-13 09:03:19] VERSION_ID="7"
[2025-10-13 09:03:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:03:19] ANSI_COLOR="0;31"
[2025-10-13 09:03:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:03:19] HOME_URL="https://www.centos.org/"
[2025-10-13 09:03:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:03:19] 
[2025-10-13 09:03:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:03:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:03:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:03:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:03:19] 
[2025-10-13 09:03:19] 2025-10-13 13:02:40,488 | INFO     | ***************************************
[2025-10-13 09:03:19] 2025-10-13 13:02:40,992 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-13 09:03:19] 2025-10-13 13:02:41,044 | INFO     | sufficient remaining disk space (76022808576 B)
[2025-10-13 09:03:19] 2025-10-13 13:02:41,045 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:03:19] 2025-10-13 13:02:41,045 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:03:19] 2025-10-13 13:02:41,045 | INFO     | update_server=False
[2025-10-13 09:03:19] 2025-10-13 13:02:41,045 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:03:19] 2025-10-13 13:02:41,046 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:03:19] 2025-10-13 13:02:41,046 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:03:19] 2025-10-13 13:02:41,068 | INFO     | all job control threads have been joined
[2025-10-13 09:03:19] 2025-10-13 13:02:41,211 | INFO     | all data control threads have been joined
[2025-10-13 09:03:19] 2025-10-13 13:02:41,360 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:03:19] 2025-10-13 13:02:41,360 | INFO     | aborting loop
[2025-10-13 09:03:19] 2025-10-13 13:02:41,714 | INFO     | all payload control threads have been joined
[2025-10-13 09:03:19] 2025-10-13 13:02:42,051 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:03:19] 2025-10-13 13:02:42,060 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:03:19] 2025-10-13 13:02:42,088 | INFO     | [job] control thread has finished
[2025-10-13 09:03:19] 2025-10-13 13:02:42,092 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:03:19] 2025-10-13 13:02:42,111 | INFO     | [job] validate thread has finished
[2025-10-13 09:03:19] 2025-10-13 13:02:42,232 | INFO     | [data] control thread has finished
[2025-10-13 09:03:19] 2025-10-13 13:02:42,350 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:03:19] 2025-10-13 13:02:42,366 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:03:19] 2025-10-13 13:02:42,527 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:03:19] 2025-10-13 13:02:42,569 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:03:19] 2025-10-13 13:02:42,658 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:03:19] 2025-10-13 13:02:42,720 | INFO     | [payload] control thread has finished
[2025-10-13 09:03:19] 2025-10-13 13:02:43,005 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:03:19] 2025-10-13 13:02:43,054 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:03:19] 2025-10-13 13:02:43,255 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:03:19] 2025-10-13 13:02:43,464 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:03:19] 2025-10-13 13:02:47,059 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:03:19] 2025-10-13 13:03:11,155 | INFO     | PID=527509 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 09:03:19] 2025-10-13 13:03:11,155 | INFO     | .. there are 25 such processes running
[2025-10-13 09:03:19] 2025-10-13 13:03:11,156 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:03:19] 2025-10-13 13:03:11,156 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:03:19] 2025-10-13 13:03:11,156 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:03:19] 2025-10-13 13:03:12,665 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:03:19] 2025-10-13 13:03:13,081 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139697959319360)>', '<ExcThread(monitor, started 139697133172480)>']
[2025-10-13 09:03:19] 2025-10-13 13:03:13,171 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:03:19] 2025-10-13 13:03:13,171 | INFO     | [monitor] control thread has ended
[2025-10-13 09:03:19] 2025-10-13 13:03:18,107 | INFO     | all workflow threads have been joined
[2025-10-13 09:03:19] 2025-10-13 13:03:18,107 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:03:19] 2025-10-13 13:03:18,107 | INFO     | traces error code: 0
[2025-10-13 09:03:19] 2025-10-13 13:03:18,108 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:03:19] 2025-10-13 13:03:18,741 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:03:19] 2025-10-13 13:03:18,744 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:03:19] 2025-10-13 13:03:18,746 [wrapper] pilotpid: 527509
[2025-10-13 09:03:19] 2025-10-13 13:03:18,749 [wrapper] Pilot exit status: 0
[2025-10-13 09:03:19] 2025-10-13 13:03:18,911 [wrapper] pandaids: 6840853918
[2025-10-13 09:03:19] 2025-10-13 13:03:19,202 [wrapper] cleanup supervisor_pilot 2119891 527510
[2025-10-13 09:03:19] 2025-10-13 13:03:19,220 [wrapper] Test setup, not cleaning
[2025-10-13 09:03:19] 2025-10-13 13:03:19,237 [wrapper] apfmon messages muted
[2025-10-13 09:03:19] 2025-10-13 13:03:19,281 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:03:19] 2025-10-13 13:03:19,344 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:03:19]  *** Error codes and diagnostics ***
[2025-10-13 09:03:19]     "exeErrorCode": 0,
[2025-10-13 09:03:19]     "exeErrorDiag": "",
[2025-10-13 09:03:19]     "pilotErrorCode": 0,
[2025-10-13 09:03:19]     "pilotErrorDiag": "",
[2025-10-13 09:03:19]  *** Listing of results directory ***
[2025-10-13 09:03:19] total 419060
[2025-10-13 09:03:19] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:57 pilot3.tar.gz
[2025-10-13 09:03:19] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 18:47 queuedata.json
[2025-10-13 09:03:19] -rwx------. 1 boincer umatlas     36292 Oct 12 18:48 runpilot2-wrapper.sh
[2025-10-13 09:03:19] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:03:19] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:11 run_atlas
[2025-10-13 09:03:19] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:11 job.xml
[2025-10-13 09:03:19] -rw-r--r--. 2 boincer umatlas 219764389 Oct 13 00:11 EVNT.46676267._004632.pool.root.1
[2025-10-13 09:03:19] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:11 start_atlas.sh
[2025-10-13 09:03:19] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:11 shared
[2025-10-13 09:03:19] -rw-r--r--. 2 boincer umatlas    569684 Oct 13 00:11 input.tar.gz
[2025-10-13 09:03:19] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:11 boinc_lockfile
[2025-10-13 09:03:19] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:11 pandaJob.out
[2025-10-13 09:03:19] -rw-------. 1 boincer umatlas    975512 Oct 13 00:13 agis_schedconf.cvmfs.json
[2025-10-13 09:03:19] drwx------. 5 boincer umatlas      4096 Oct 13 00:13 pilot3
[2025-10-13 09:03:19] -rw-------. 1 boincer umatlas 196601831 Oct 13 09:00 HITS.46676269._091518.pool.root.1
[2025-10-13 09:03:19] -rw-r--r--. 1 boincer umatlas       531 Oct 13 09:00 boinc_task_state.xml
[2025-10-13 09:03:19] -rw-------. 1 boincer umatlas      1055 Oct 13 09:01 memory_monitor_summary.json
[2025-10-13 09:03:19] -rw-------. 1 boincer umatlas   1560580 Oct 13 09:01 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:03:19] -rw-------. 1 boincer umatlas    676250 Oct 13 09:01 log.46676269._091518.job.log.tgz.1
[2025-10-13 09:03:19] -rw-r--r--. 1 boincer umatlas      6613 Oct 13 09:01 init_data.xml
[2025-10-13 09:03:19] -rw-------. 1 boincer umatlas        95 Oct 13 09:02 pilot_heartbeat.json
[2025-10-13 09:03:19] -rw-------. 1 boincer umatlas      7825 Oct 13 09:02 heartbeat.json
[2025-10-13 09:03:19] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 09:03 boinc_mmap_file
[2025-10-13 09:03:19] -rw-r--r--. 1 boincer umatlas        28 Oct 13 09:03 wrapper_checkpoint.txt
[2025-10-13 09:03:19] -rw-------. 1 boincer umatlas      4823 Oct 13 09:03 pilotlog.txt
[2025-10-13 09:03:19] -rw-------. 1 boincer umatlas   3746299 Oct 13 09:03 log.46676269._091518.job.log.1
[2025-10-13 09:03:19] -rw-------. 1 boincer umatlas       357 Oct 13 09:03 output.list
[2025-10-13 09:03:19] -rw-r--r--. 1 boincer umatlas       620 Oct 13 09:03 runtime_log
[2025-10-13 09:03:19] -rw-------. 1 boincer umatlas   4444160 Oct 13 09:03 result.tar.gz
[2025-10-13 09:03:19] -rw-r--r--. 1 boincer umatlas      8694 Oct 13 09:03 runtime_log.err
[2025-10-13 09:03:19] -rw-------. 1 boincer umatlas       654 Oct 13 09:03 HtFODmM2JS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxvlNDmizA23m.diag
[2025-10-13 09:03:19] -rw-r--r--. 1 boincer umatlas     21133 Oct 13 09:03 stderr.txt
[2025-10-13 09:03:19] HITS file was successfully produced:
[2025-10-13 09:03:19] -rw-------. 1 boincer umatlas 196601831 Oct 13 09:00 shared/HITS.pool.root.1
[2025-10-13 09:03:19]  *** Contents of shared directory: ***
[2025-10-13 09:03:19] total 411532
[2025-10-13 09:03:19] -rw-r--r--. 2 boincer umatlas 219764389 Oct 13 00:11 ATLAS.root_0
[2025-10-13 09:03:19] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:11 start_atlas.sh
[2025-10-13 09:03:19] -rw-r--r--. 2 boincer umatlas    569684 Oct 13 00:11 input.tar.gz
[2025-10-13 09:03:19] -rw-------. 1 boincer umatlas 196601831 Oct 13 09:00 HITS.pool.root.1
[2025-10-13 09:03:19] -rw-------. 1 boincer umatlas   4444160 Oct 13 09:03 result.tar.gz
09:03:21 (522389): run_atlas exited; CPU time 56662.136743
09:03:21 (522389): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN