Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:04:36 (838538): wrapper (7.7.26015): starting
06:04:36 (838538): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 06:04:36] Arguments: --nthreads 8
[2025-10-13 06:04:36] Threads: 8
[2025-10-13 06:04:36] Checking for CVMFS
[2025-10-13 06:04:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:04:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:04:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:04:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:04:39] 2.13.2.0 738863 130559 297596 151656 0 382 25855608 32935936 19908 16776704 0 102320575 99.692 83677365 30989 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 06:04:39] CVMFS is ok
[2025-10-13 06:04:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:04:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:04:39] Further information can be found at the LHC@home message board.
[2025-10-13 06:04:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:04:39] Checking for apptainer binary...
[2025-10-13 06:04:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:04:39] Running /usr/bin/apptainer --version
[2025-10-13 06:04:39] apptainer version 1.4.3-1.el9
[2025-10-13 06:04:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:04:40] c-4-38.aglt2.org
[2025-10-13 06:04:40] apptainer works
[2025-10-13 06:04:41] Set ATHENA_PROC_NUMBER=8
[2025-10-13 06:04:41] Set ATHENA_CORE_NUMBER=8
[2025-10-13 06:04:41] Starting ATLAS job with PandaID=6840961629
[2025-10-13 06:04:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:49:33]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:49:33] 2025-10-13 13:48:29,077 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 09:49:33] 2025-10-13 13:48:29,077 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 09:49:33] 2025-10-13 13:48:29,082 | INFO     | fitting pss+swap vs Time
[2025-10-13 09:49:33] 2025-10-13 13:48:29,083 | INFO     | sum of square deviations: 3124338704.2037096
[2025-10-13 09:49:33] 2025-10-13 13:48:29,084 | INFO     | sum of deviations: 41196662156.13895
[2025-10-13 09:49:33] 2025-10-13 13:48:29,085 | INFO     | mean x: 1760356708.2129629
[2025-10-13 09:49:33] 2025-10-13 13:48:29,085 | INFO     | mean y: 2231999.236111111
[2025-10-13 09:49:33] 2025-10-13 13:48:29,085 | INFO     | -- intersect: -23209342496.502007
[2025-10-13 09:49:33] 2025-10-13 13:48:29,085 | INFO     | intersect: -23209342496.502007
[2025-10-13 09:49:33] 2025-10-13 13:48:29,085 | INFO     | chi2: 3.363551410883246
[2025-10-13 09:49:33] 2025-10-13 13:48:29,086 | INFO     | sum of square deviations: 2912363091.6019044
[2025-10-13 09:49:33] 2025-10-13 13:48:29,088 | INFO     | sum of deviations: 53803072683.78203
[2025-10-13 09:49:33] 2025-10-13 13:48:29,088 | INFO     | mean x: 1760356555.729858
[2025-10-13 09:49:33] 2025-10-13 13:48:29,088 | INFO     | mean y: 2240875.066350711
[2025-10-13 09:49:33] 2025-10-13 13:48:29,088 | INFO     | -- intersect: -32518632634.977486
[2025-10-13 09:49:33] 2025-10-13 13:48:29,088 | INFO     | intersect: -32518632634.977486
[2025-10-13 09:49:33] 2025-10-13 13:48:29,089 | INFO     | chi2: 2.491159861658163
[2025-10-13 09:49:33] 2025-10-13 13:48:29,089 | INFO     | current chi2=2.491159861658163 (change=25.936620038044804 %)
[2025-10-13 09:49:33] 2025-10-13 13:48:29,089 | INFO     | sum of square deviations: 2710201616.3737926
[2025-10-13 09:49:33] 2025-10-13 13:48:29,091 | INFO     | sum of deviations: 51673530755.50484
[2025-10-13 09:49:33] 2025-10-13 13:48:29,091 | INFO     | mean x: 1760356403.247573
[2025-10-13 09:49:33] 2025-10-13 13:48:29,091 | INFO     | mean y: 2239271.009708738
[2025-10-13 09:49:33] 2025-10-13 13:48:29,091 | INFO     | -- intersect: -33561252904.001064
[2025-10-13 09:49:33] 2025-10-13 13:48:29,091 | INFO     | intersect: -33561252904.001064
[2025-10-13 09:49:33] 2025-10-13 13:48:29,092 | INFO     | chi2: 2.4927655140646023
[2025-10-13 09:49:33] 2025-10-13 13:48:29,092 | INFO     | current chi2=2.4927655140646023 (change=-0.06445400920077528 %)
[2025-10-13 09:49:33] 2025-10-13 13:48:29,092 | INFO     | right removable region: 205
[2025-10-13 09:49:33] 2025-10-13 13:48:29,092 | INFO     | sum of square deviations: 2912282084.05687
[2025-10-13 09:49:33] 2025-10-13 13:48:29,094 | INFO     | sum of deviations: -3210278669.4644585
[2025-10-13 09:49:33] 2025-10-13 13:48:29,094 | INFO     | mean x: 1760356860.7251184
[2025-10-13 09:49:33] 2025-10-13 13:48:29,094 | INFO     | mean y: 2263756.5781990523
[2025-10-13 09:49:33] 2025-10-13 13:48:29,095 | INFO     | -- intersect: 1942747513.824329
[2025-10-13 09:49:33] 2025-10-13 13:48:29,095 | INFO     | intersect: 1942747513.824329
[2025-10-13 09:49:33] 2025-10-13 13:48:29,095 | INFO     | chi2: 1.132741811548822
[2025-10-13 09:49:33] 2025-10-13 13:48:29,095 | INFO     | current chi2=1.132741811548822 (change=66.32304153628584 %)
[2025-10-13 09:49:33] 2025-10-13 13:48:29,096 | INFO     | sum of square deviations: 2710065710.2767
[2025-10-13 09:49:33] 2025-10-13 13:48:29,097 | INFO     | sum of deviations: -13303201906.101946
[2025-10-13 09:49:33] 2025-10-13 13:48:29,098 | INFO     | mean x: 1760357013.2281554
[2025-10-13 09:49:33] 2025-10-13 13:48:29,098 | INFO     | mean y: 2271345.8106796117
[2025-10-13 09:49:33] 2025-10-13 13:48:29,098 | INFO     | -- intersect: 8643532214.502195
[2025-10-13 09:49:33] 2025-10-13 13:48:29,098 | INFO     | intersect: 8643532214.502195
[2025-10-13 09:49:33] 2025-10-13 13:48:29,098 | INFO     | chi2: 1.0258828414466024
[2025-10-13 09:49:33] 2025-10-13 13:48:29,098 | INFO     | current chi2=1.0258828414466024 (change=9.43365637365403 %)
[2025-10-13 09:49:33] 2025-10-13 13:48:29,099 | INFO     | left removable region: 20
[2025-10-13 09:49:33] 2025-10-13 13:48:29,099 | INFO     | sum of square deviations: 1962815605.0054014
[2025-10-13 09:49:33] 2025-10-13 13:48:29,100 | INFO     | sum of deviations: -4448374766.0108185
[2025-10-13 09:49:33] 2025-10-13 13:48:29,100 | INFO     | mean x: 1760356982.7675676
[2025-10-13 09:49:33] 2025-10-13 13:48:29,101 | INFO     | mean y: 2284509.464864865
[2025-10-13 09:49:33] 2025-10-13 13:48:29,101 | INFO     | -- intersect: 3991822579.849546
[2025-10-13 09:49:33] 2025-10-13 13:48:29,101 | INFO     | intersect: 3991822579.849546
[2025-10-13 09:49:33] 2025-10-13 13:48:29,101 | INFO     | chi2: 0.07921028823957074
[2025-10-13 09:49:33] 2025-10-13 13:48:29,101 | INFO     | -- intersect: 3991822579.849546
[2025-10-13 09:49:33] 2025-10-13 13:48:29,101 | INFO     | current memory leak: -2.27 B/s (using 185 data points, chi2=0.08)
[2025-10-13 09:49:33] 2025-10-13 13:48:29,102 | INFO     | could have reported an average CPU frequency of 2609 MHz (11 samples)
[2025-10-13 09:49:33] 2025-10-13 13:48:29,102 | INFO     | ..............................
[2025-10-13 09:49:33] 2025-10-13 13:48:29,102 | INFO     | . Timing measurements:
[2025-10-13 09:49:33] 2025-10-13 13:48:29,103 | INFO     | . get job = 0 s
[2025-10-13 09:49:33] 2025-10-13 13:48:29,103 | INFO     | . initial setup = 7 s
[2025-10-13 09:49:33] 2025-10-13 13:48:29,103 | INFO     | . payload setup = 50 s
[2025-10-13 09:49:33] 2025-10-13 13:48:29,103 | INFO     | . stage-in = 0 s
[2025-10-13 09:49:33] 2025-10-13 13:48:29,103 | INFO     | . payload execution = 13188 s
[2025-10-13 09:49:33] 2025-10-13 13:48:29,103 | INFO     | . stage-out = 2 s
[2025-10-13 09:49:33] 2025-10-13 13:48:29,103 | INFO     | . log creation = 0 s
[2025-10-13 09:49:33] 2025-10-13 13:48:29,103 | INFO     | ..............................
[2025-10-13 09:49:33] 2025-10-13 13:48:29,215 | INFO     | 
[2025-10-13 09:49:33] 2025-10-13 13:48:29,216 | INFO     | job summary report
[2025-10-13 09:49:33] 2025-10-13 13:48:29,216 | INFO     | --------------------------------------------------
[2025-10-13 09:49:33] 2025-10-13 13:48:29,216 | INFO     | PanDA job id: 6840961629
[2025-10-13 09:49:33] 2025-10-13 13:48:29,216 | INFO     | task id: 46676269
[2025-10-13 09:49:33] 2025-10-13 13:48:29,216 | INFO     | errors: (none)
[2025-10-13 09:49:33] 2025-10-13 13:48:29,216 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:49:33] 2025-10-13 13:48:29,216 | INFO     | pilot state: finished 
[2025-10-13 09:49:33] 2025-10-13 13:48:29,217 | INFO     | transexitcode: 0
[2025-10-13 09:49:33] 2025-10-13 13:48:29,217 | INFO     | exeerrorcode: 0
[2025-10-13 09:49:33] 2025-10-13 13:48:29,217 | INFO     | exeerrordiag: 
[2025-10-13 09:49:33] 2025-10-13 13:48:29,217 | INFO     | exitcode: 0
[2025-10-13 09:49:33] 2025-10-13 13:48:29,217 | INFO     | exitmsg: OK
[2025-10-13 09:49:33] 2025-10-13 13:48:29,217 | INFO     | cpuconsumptiontime: 48906 s
[2025-10-13 09:49:33] 2025-10-13 13:48:29,217 | INFO     | nevents: 400
[2025-10-13 09:49:33] 2025-10-13 13:48:29,217 | INFO     | neventsw: 0
[2025-10-13 09:49:33] 2025-10-13 13:48:29,217 | INFO     | pid: 863628
[2025-10-13 09:49:33] 2025-10-13 13:48:29,217 | INFO     | pgrp: 863628
[2025-10-13 09:49:33] 2025-10-13 13:48:29,217 | INFO     | corecount: 8
[2025-10-13 09:49:33] 2025-10-13 13:48:29,218 | INFO     | event service: False
[2025-10-13 09:49:33] 2025-10-13 13:48:29,218 | INFO     | sizes: {0: 2348029, 1: 2348630, 2: 2348742, 3: 2348770, 4: 2348770, 5: 2348941, 16: 2349125, 28: 2349153, 39: 2349181, 43: 2349471, 50: 2349499, 13241: 2379925, 13
[2025-10-13 09:49:33] 2025-10-13 13:48:29,218 | INFO     | --------------------------------------------------
[2025-10-13 09:49:33] 2025-10-13 13:48:29,218 | INFO     | 
[2025-10-13 09:49:33] 2025-10-13 13:48:29,218 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 09:49:33] 2025-10-13 13:48:29,241 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:49:33] 2025-10-13 13:48:29,242 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:49:33] 2025-10-13 13:48:29,242 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:49:33] 2025-10-13 13:48:29,242 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:49:33] 2025-10-13 13:48:29,242 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:49:33] 2025-10-13 13:48:29,242 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:49:33] 2025-10-13 13:48:29,242 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:49:33] 2025-10-13 13:48:29,242 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:49:33] 2025-10-13 13:48:29,242 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:49:33] 2025-10-13 13:48:29,243 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:49:33] 2025-10-13 13:48:29,243 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:49:33] 2025-10-13 13:48:29,243 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:49:33] 2025-10-13 13:48:29,243 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:49:33] 2025-10-13 13:48:29,243 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:49:33] 2025-10-13 13:48:29,243 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:49:33] 2025-10-13 13:48:29,243 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:49:33] 2025-10-13 13:48:29,243 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:49:33] 2025-10-13 13:48:29,243 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:49:33] 2025-10-13 13:48:29,244 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:49:33] 2025-10-13 13:48:29,244 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:49:33] 2025-10-13 13:48:29,244 | INFO     | job 6840961629 has completed (purged errors)
[2025-10-13 09:49:33] 2025-10-13 13:48:29,244 | INFO     | overall cleanup function is called
[2025-10-13 09:49:33] 2025-10-13 13:48:30,253 | INFO     | --- collectZombieJob: --- 10, [863628]
[2025-10-13 09:49:33] 2025-10-13 13:48:30,254 | INFO     | zombie collector waiting for pid 863628
[2025-10-13 09:49:33] 2025-10-13 13:48:30,254 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:49:33] 2025-10-13 13:48:30,254 | INFO     | collected zombie processes
[2025-10-13 09:49:33] 2025-10-13 13:48:30,254 | INFO     | will attempt to kill all subprocesses of pid=863628
[2025-10-13 09:49:33] 2025-10-13 13:48:30,557 | INFO     | process IDs to be killed: [863628] (in reverse order)
[2025-10-13 09:49:33] 2025-10-13 13:48:30,650 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:49:33] 2025-10-13 13:48:30,651 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:49:33] 2025-10-13 13:48:30,662 | INFO     | did not find any defunct processes belonging to 863628
[2025-10-13 09:49:33] 2025-10-13 13:48:30,673 | INFO     | did not find any defunct processes belonging to 863628
[2025-10-13 09:49:33] 2025-10-13 13:48:30,674 | INFO     | ready for new job
[2025-10-13 09:49:33] 2025-10-13 13:48:30,674 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:49:33] 2025-10-13 13:48:30,677 | INFO     | ***************************************
[2025-10-13 09:49:33] 2025-10-13 13:48:30,677 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:49:33] 2025-10-13 13:48:30,677 | INFO     | ***************************************
[2025-10-13 09:49:33] 2025-10-13 13:48:30,677 | INFO     | 
[2025-10-13 09:49:33] 2025-10-13 13:48:30,691 | INFO     | architecture information:
[2025-10-13 09:49:33] 2025-10-13 13:48:30,691 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:49:33] 2025-10-13 13:48:30,707 | INFO     | cat /etc/os-release:
[2025-10-13 09:49:33] NAME="CentOS Linux"
[2025-10-13 09:49:33] VERSION="7 (Core)"
[2025-10-13 09:49:33] ID="centos"
[2025-10-13 09:49:33] ID_LIKE="rhel fedora"
[2025-10-13 09:49:33] VERSION_ID="7"
[2025-10-13 09:49:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:49:33] ANSI_COLOR="0;31"
[2025-10-13 09:49:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:49:33] HOME_URL="https://www.centos.org/"
[2025-10-13 09:49:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:49:33] 
[2025-10-13 09:49:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:49:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:49:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:49:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:49:33] 
[2025-10-13 09:49:33] 2025-10-13 13:48:30,708 | INFO     | ***************************************
[2025-10-13 09:49:33] 2025-10-13 13:48:31,211 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 09:49:33] 2025-10-13 13:48:31,231 | INFO     | sufficient remaining disk space (76542902272 B)
[2025-10-13 09:49:33] 2025-10-13 13:48:31,232 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:49:33] 2025-10-13 13:48:31,232 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:49:33] 2025-10-13 13:48:31,232 | INFO     | update_server=False
[2025-10-13 09:49:33] 2025-10-13 13:48:31,232 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:49:33] 2025-10-13 13:48:31,233 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:49:33] 2025-10-13 13:48:31,262 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:49:33] 2025-10-13 13:48:31,262 | INFO     | aborting loop
[2025-10-13 09:49:33] 2025-10-13 13:48:31,273 | INFO     | all job control threads have been joined
[2025-10-13 09:49:33] 2025-10-13 13:48:31,881 | INFO     | all payload control threads have been joined
[2025-10-13 09:49:33] 2025-10-13 13:48:31,976 | INFO     | all data control threads have been joined
[2025-10-13 09:49:33] 2025-10-13 13:48:32,237 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:49:33] 2025-10-13 13:48:32,268 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:49:33] 2025-10-13 13:48:32,278 | INFO     | [job] control thread has finished
[2025-10-13 09:49:33] 2025-10-13 13:48:32,344 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:49:33] 2025-10-13 13:48:32,554 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:49:33] 2025-10-13 13:48:32,781 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:49:33] 2025-10-13 13:48:32,882 | INFO     | [job] validate thread has finished
[2025-10-13 09:49:33] 2025-10-13 13:48:32,886 | INFO     | [payload] control thread has finished
[2025-10-13 09:49:33] 2025-10-13 13:48:32,917 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:49:33] 2025-10-13 13:48:32,978 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:49:33] 2025-10-13 13:48:32,982 | INFO     | [data] control thread has finished
[2025-10-13 09:49:33] 2025-10-13 13:48:33,148 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:49:33] 2025-10-13 13:48:33,727 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:49:33] 2025-10-13 13:48:34,227 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:49:33] 2025-10-13 13:48:34,349 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:49:33] 2025-10-13 13:48:35,232 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:49:33] 2025-10-13 13:48:35,241 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:49:33] 2025-10-13 13:48:41,789 | INFO     | job.realtimelogging is not enabled
[2025-10-13 09:49:33] 2025-10-13 13:48:42,794 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:49:33] 2025-10-13 13:49:01,756 | INFO     | PID=846977 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 09:49:33] 2025-10-13 13:49:01,757 | INFO     | .. there are 18 such processes running
[2025-10-13 09:49:33] 2025-10-13 13:49:01,759 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:49:33] 2025-10-13 13:49:01,759 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:49:33] 2025-10-13 13:49:01,759 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:49:33] 2025-10-13 13:49:27,714 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:49:33] 2025-10-13 13:49:28,043 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140275996018496)>', '<ExcThread(monitor, started 140275722721024)>']
[2025-10-13 09:49:33] 2025-10-13 13:49:28,889 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:49:33] 2025-10-13 13:49:28,889 | INFO     | [monitor] control thread has ended
[2025-10-13 09:49:33] 2025-10-13 13:49:33,068 | INFO     | all workflow threads have been joined
[2025-10-13 09:49:33] 2025-10-13 13:49:33,068 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:49:33] 2025-10-13 13:49:33,069 | INFO     | traces error code: 0
[2025-10-13 09:49:33] 2025-10-13 13:49:33,069 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:49:33] 2025-10-13 13:49:33,264 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:49:33] 2025-10-13 13:49:33,268 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:49:33] 2025-10-13 13:49:33,271 [wrapper] pilotpid: 846977
[2025-10-13 09:49:33] 2025-10-13 13:49:33,274 [wrapper] Pilot exit status: 0
[2025-10-13 09:49:33] 2025-10-13 13:49:33,286 [wrapper] pandaids: 6840961629
[2025-10-13 09:49:33] 2025-10-13 13:49:33,343 [wrapper] cleanup supervisor_pilot 1302912 846978
[2025-10-13 09:49:33] 2025-10-13 13:49:33,346 [wrapper] Test setup, not cleaning
[2025-10-13 09:49:33] 2025-10-13 13:49:33,349 [wrapper] apfmon messages muted
[2025-10-13 09:49:33] 2025-10-13 13:49:33,352 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:49:33] 2025-10-13 13:49:33,355 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:49:33]  *** Error codes and diagnostics ***
[2025-10-13 09:49:33]     "exeErrorCode": 0,
[2025-10-13 09:49:33]     "exeErrorDiag": "",
[2025-10-13 09:49:33]     "pilotErrorCode": 0,
[2025-10-13 09:49:33]     "pilotErrorDiag": "",
[2025-10-13 09:49:33]  *** Listing of results directory ***
[2025-10-13 09:49:33] total 405900
[2025-10-13 09:49:33] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 18:57 pilot3.tar.gz
[2025-10-13 09:49:33] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:08 queuedata.json
[2025-10-13 09:49:33] -rwx------. 1 boincer umatlas     36292 Oct 12 19:09 runpilot2-wrapper.sh
[2025-10-13 09:49:33] -rw-r--r--. 1 boincer umatlas       100 Oct 13 06:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:49:33] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 06:04 run_atlas
[2025-10-13 09:49:33] -rw-r--r--. 1 boincer umatlas       105 Oct 13 06:04 job.xml
[2025-10-13 09:49:33] -rw-r--r--. 2 boincer umatlas 220336227 Oct 13 06:04 EVNT.46676267._004646.pool.root.1
[2025-10-13 09:49:33] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 06:04 input.tar.gz
[2025-10-13 09:49:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 06:04 start_atlas.sh
[2025-10-13 09:49:33] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 06:04 shared
[2025-10-13 09:49:33] -rw-r--r--. 1 boincer umatlas         0 Oct 13 06:04 boinc_lockfile
[2025-10-13 09:49:33] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 06:04 pandaJob.out
[2025-10-13 09:49:33] -rw-------. 1 boincer umatlas    972849 Oct 13 06:05 agis_schedconf.cvmfs.json
[2025-10-13 09:49:33] drwx------. 5 boincer umatlas      4096 Oct 13 06:06 pilot3
[2025-10-13 09:49:33] -rw-r--r--. 1 boincer umatlas      6659 Oct 13 09:47 init_data.xml
[2025-10-13 09:49:33] -rw-------. 1 boincer umatlas 186996177 Oct 13 09:47 HITS.46676269._091915.pool.root.1
[2025-10-13 09:49:33] -rw-r--r--. 1 boincer umatlas       531 Oct 13 09:47 boinc_task_state.xml
[2025-10-13 09:49:33] -rw-------. 1 boincer umatlas      1040 Oct 13 09:48 memory_monitor_summary.json
[2025-10-13 09:49:33] -rw-------. 1 boincer umatlas   1560580 Oct 13 09:48 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:49:33] -rw-------. 1 boincer umatlas    455971 Oct 13 09:48 log.46676269._091915.job.log.tgz.1
[2025-10-13 09:49:33] -rw-------. 1 boincer umatlas      7826 Oct 13 09:48 heartbeat.json
[2025-10-13 09:49:33] -rw-------. 1 boincer umatlas        95 Oct 13 09:49 pilot_heartbeat.json
[2025-10-13 09:49:33] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 09:49 boinc_mmap_file
[2025-10-13 09:49:33] -rw-r--r--. 1 boincer umatlas        28 Oct 13 09:49 wrapper_checkpoint.txt
[2025-10-13 09:49:33] -rw-------. 1 boincer umatlas      4895 Oct 13 09:49 pilotlog.txt
[2025-10-13 09:49:33] -rw-------. 1 boincer umatlas   1742493 Oct 13 09:49 log.46676269._091915.job.log.1
[2025-10-13 09:49:33] -rw-------. 1 boincer umatlas       357 Oct 13 09:49 output.list
[2025-10-13 09:49:33] -rw-r--r--. 1 boincer umatlas       620 Oct 13 09:49 runtime_log
[2025-10-13 09:49:33] -rw-------. 1 boincer umatlas   2222080 Oct 13 09:49 result.tar.gz
[2025-10-13 09:49:33] -rw-r--r--. 1 boincer umatlas      8694 Oct 13 09:49 runtime_log.err
[2025-10-13 09:49:33] -rw-------. 1 boincer umatlas       655 Oct 13 09:49 5B1LDmwMKS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmoFVMDmn0mdFo.diag
[2025-10-13 09:49:33] -rw-r--r--. 1 boincer umatlas     21008 Oct 13 09:49 stderr.txt
[2025-10-13 09:49:33] HITS file was successfully produced:
[2025-10-13 09:49:33] -rw-------. 1 boincer umatlas 186996177 Oct 13 09:47 shared/HITS.pool.root.1
[2025-10-13 09:49:33]  *** Contents of shared directory: ***
[2025-10-13 09:49:33] total 400548
[2025-10-13 09:49:33] -rw-r--r--. 2 boincer umatlas 220336227 Oct 13 06:04 ATLAS.root_0
[2025-10-13 09:49:33] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 06:04 input.tar.gz
[2025-10-13 09:49:33] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 06:04 start_atlas.sh
[2025-10-13 09:49:33] -rw-------. 1 boincer umatlas 186996177 Oct 13 09:47 HITS.pool.root.1
[2025-10-13 09:49:33] -rw-------. 1 boincer umatlas   2222080 Oct 13 09:49 result.tar.gz
09:49:34 (838538): run_atlas exited; CPU time 49226.010796
09:49:34 (838538): called boinc_finish(0)

</stderr_txt>
]]>

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