Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:36:43 (161277): wrapper (7.7.26015): starting
00:36:43 (161277): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 00:36:43] Arguments: --nthreads 8
[2025-10-13 00:36:43] Threads: 8
[2025-10-13 00:36:43] Checking for CVMFS
[2025-10-13 00:36:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:36:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:36:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:36:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:36:46] 2.13.2.0 3310087 19641 231816 151649 3 331 27027428 40960001 13078 16776704 0 41985430 99.800 20748748 36936 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:36:46] CVMFS is ok
[2025-10-13 00:36:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:36:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:36:46] Further information can be found at the LHC@home message board.
[2025-10-13 00:36:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:36:46] Checking for apptainer binary...
[2025-10-13 00:36:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:36:46] Running /usr/bin/apptainer --version
[2025-10-13 00:36:47] apptainer version 1.4.3-1.el9
[2025-10-13 00:36:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:36:48] c-206-38.aglt2.org
[2025-10-13 00:36:48] apptainer works
[2025-10-13 00:36:48] Set ATHENA_PROC_NUMBER=8
[2025-10-13 00:36:48] Set ATHENA_CORE_NUMBER=8
[2025-10-13 00:36:48] Starting ATLAS job with PandaID=6840961687
[2025-10-13 00:36:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 02:34:17]  *** The last 200 lines of the pilot log: ***
[2025-10-13 02:34:17] 2025-10-13 06:33:56,465 | INFO     | sum of deviations: 36548952422.427284
[2025-10-13 02:34:17] 2025-10-13 06:33:56,465 | INFO     | mean x: 1760333895.6090908
[2025-10-13 02:34:17] 2025-10-13 06:33:56,465 | INFO     | mean y: 2414329.172727273
[2025-10-13 02:34:17] 2025-10-13 06:33:56,465 | INFO     | -- intersect: -155901249309.95844
[2025-10-13 02:34:17] 2025-10-13 06:33:56,465 | INFO     | intersect: -155901249309.95844
[2025-10-13 02:34:17] 2025-10-13 06:33:56,465 | INFO     | chi2: 7.108077644373773
[2025-10-13 02:34:17] 2025-10-13 06:33:56,466 | INFO     | sum of square deviations: 358924742.6285716
[2025-10-13 02:34:17] 2025-10-13 06:33:56,466 | INFO     | sum of deviations: 41687317566.65714
[2025-10-13 02:34:17] 2025-10-13 06:33:56,466 | INFO     | mean x: 1760333743.1142857
[2025-10-13 02:34:17] 2025-10-13 06:33:56,466 | INFO     | mean y: 2428188.0285714287
[2025-10-13 02:34:17] 2025-10-13 06:33:56,466 | INFO     | -- intersect: -204451550757.76816
[2025-10-13 02:34:17] 2025-10-13 06:33:56,466 | INFO     | intersect: -204451550757.76816
[2025-10-13 02:34:17] 2025-10-13 06:33:56,466 | INFO     | chi2: 6.529427845750727
[2025-10-13 02:34:17] 2025-10-13 06:33:56,466 | INFO     | current chi2=6.529427845750727 (change=8.140735478333747 %)
[2025-10-13 02:34:17] 2025-10-13 06:33:56,467 | INFO     | right removable region: 104
[2025-10-13 02:34:17] 2025-10-13 06:33:56,467 | INFO     | sum of square deviations: 358917422.6285716
[2025-10-13 02:34:17] 2025-10-13 06:33:56,467 | INFO     | sum of deviations: 1282420113.7428694
[2025-10-13 02:34:17] 2025-10-13 06:33:56,467 | INFO     | mean x: 1760334048.1142857
[2025-10-13 02:34:17] 2025-10-13 06:33:56,467 | INFO     | mean y: 2514117.1047619046
[2025-10-13 02:34:17] 2025-10-13 06:33:56,467 | INFO     | -- intersect: -6287199471.261066
[2025-10-13 02:34:17] 2025-10-13 06:33:56,467 | INFO     | intersect: -6287199471.261066
[2025-10-13 02:34:17] 2025-10-13 06:33:56,468 | INFO     | chi2: 2.4053538689061913
[2025-10-13 02:34:17] 2025-10-13 06:33:56,468 | INFO     | current chi2=2.4053538689061913 (change=66.16027582633272 %)
[2025-10-13 02:34:17] 2025-10-13 06:33:56,468 | INFO     | sum of square deviations: 310038427.5600001
[2025-10-13 02:34:17] 2025-10-13 06:33:56,468 | INFO     | sum of deviations: -17875095171.4
[2025-10-13 02:34:17] 2025-10-13 06:33:56,468 | INFO     | mean x: 1760334200.62
[2025-10-13 02:34:17] 2025-10-13 06:33:56,468 | INFO     | mean y: 2573285.2
[2025-10-13 02:34:17] 2025-10-13 06:33:56,468 | INFO     | -- intersect: 101493674298.68118
[2025-10-13 02:34:17] 2025-10-13 06:33:56,468 | INFO     | intersect: 101493674298.68118
[2025-10-13 02:34:17] 2025-10-13 06:33:56,469 | INFO     | chi2: 0.9058273970014761
[2025-10-13 02:34:17] 2025-10-13 06:33:56,469 | INFO     | current chi2=0.9058273970014761 (change=62.34120024038744 %)
[2025-10-13 02:34:17] 2025-10-13 06:33:56,469 | INFO     | sum of square deviations: 265810682.48421028
[2025-10-13 02:34:17] 2025-10-13 06:33:56,469 | INFO     | sum of deviations: -20036178157.67368
[2025-10-13 02:34:17] 2025-10-13 06:33:56,469 | INFO     | mean x: 1760334353.1263158
[2025-10-13 02:34:17] 2025-10-13 06:33:56,469 | INFO     | mean y: 2580574.389473684
[2025-10-13 02:34:17] 2025-10-13 06:33:56,469 | INFO     | -- intersect: 132692404725.48338
[2025-10-13 02:34:17] 2025-10-13 06:33:56,469 | INFO     | intersect: 132692404725.48338
[2025-10-13 02:34:17] 2025-10-13 06:33:56,470 | INFO     | chi2: 0.8359885322457827
[2025-10-13 02:34:17] 2025-10-13 06:33:56,470 | INFO     | current chi2=0.8359885322457827 (change=7.709952799714176 %)
[2025-10-13 02:34:17] 2025-10-13 06:33:56,470 | INFO     | left removable region: 30
[2025-10-13 02:34:17] 2025-10-13 06:33:56,470 | INFO     | sum of square deviations: 125633867.83783796
[2025-10-13 02:34:17] 2025-10-13 06:33:56,470 | INFO     | sum of deviations: -2027584167.3783784
[2025-10-13 02:34:17] 2025-10-13 06:33:56,470 | INFO     | mean x: 1760334627.5945945
[2025-10-13 02:34:17] 2025-10-13 06:33:56,470 | INFO     | mean y: 2551812.554054054
[2025-10-13 02:34:17] 2025-10-13 06:33:56,470 | INFO     | -- intersect: 28412300566.01675
[2025-10-13 02:34:17] 2025-10-13 06:33:56,470 | INFO     | intersect: 28412300566.01675
[2025-10-13 02:34:17] 2025-10-13 06:33:56,471 | INFO     | chi2: 0.05368005728496451
[2025-10-13 02:34:17] 2025-10-13 06:33:56,471 | INFO     | -- intersect: 28412300566.01675
[2025-10-13 02:34:17] 2025-10-13 06:33:56,471 | INFO     | current memory leak: -16.14 B/s (using 74 data points, chi2=0.05)
[2025-10-13 02:34:17] 2025-10-13 06:33:56,471 | INFO     | could have reported an average CPU frequency of 3253 MHz (7 samples)
[2025-10-13 02:34:17] 2025-10-13 06:33:56,471 | INFO     | ..............................
[2025-10-13 02:34:17] 2025-10-13 06:33:56,471 | INFO     | . Timing measurements:
[2025-10-13 02:34:17] 2025-10-13 06:33:56,471 | INFO     | . get job = 0 s
[2025-10-13 02:34:17] 2025-10-13 06:33:56,471 | INFO     | . initial setup = 11 s
[2025-10-13 02:34:17] 2025-10-13 06:33:56,471 | INFO     | . payload setup = 86 s
[2025-10-13 02:34:17] 2025-10-13 06:33:56,471 | INFO     | . stage-in = 0 s
[2025-10-13 02:34:17] 2025-10-13 06:33:56,472 | INFO     | . payload execution = 6699 s
[2025-10-13 02:34:17] 2025-10-13 06:33:56,472 | INFO     | . stage-out = 0 s
[2025-10-13 02:34:17] 2025-10-13 06:33:56,472 | INFO     | . log creation = 0 s
[2025-10-13 02:34:17] 2025-10-13 06:33:56,472 | INFO     | ..............................
[2025-10-13 02:34:17] 2025-10-13 06:33:56,540 | INFO     | 
[2025-10-13 02:34:17] 2025-10-13 06:33:56,540 | INFO     | time since job start (6907s) is within the limit (172800.0s)
[2025-10-13 02:34:17] 2025-10-13 06:33:56,541 | INFO     | job summary report
[2025-10-13 02:34:17] 2025-10-13 06:33:56,541 | INFO     | --------------------------------------------------
[2025-10-13 02:34:17] 2025-10-13 06:33:56,541 | INFO     | PanDA job id: 6840961687
[2025-10-13 02:34:17] 2025-10-13 06:33:56,541 | INFO     | task id: 46676269
[2025-10-13 02:34:17] 2025-10-13 06:33:56,541 | INFO     | errors: (none)
[2025-10-13 02:34:17] 2025-10-13 06:33:56,541 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 02:34:17] 2025-10-13 06:33:56,541 | INFO     | pilot state: finished 
[2025-10-13 02:34:17] 2025-10-13 06:33:56,541 | INFO     | transexitcode: 0
[2025-10-13 02:34:17] 2025-10-13 06:33:56,541 | INFO     | exeerrorcode: 0
[2025-10-13 02:34:17] 2025-10-13 06:33:56,541 | INFO     | exeerrordiag: 
[2025-10-13 02:34:17] 2025-10-13 06:33:56,542 | INFO     | exitcode: 0
[2025-10-13 02:34:17] 2025-10-13 06:33:56,542 | INFO     | exitmsg: OK
[2025-10-13 02:34:17] 2025-10-13 06:33:56,542 | INFO     | cpuconsumptiontime: 34717 s
[2025-10-13 02:34:17] 2025-10-13 06:33:56,542 | INFO     | nevents: 400
[2025-10-13 02:34:17] 2025-10-13 06:33:56,542 | INFO     | neventsw: 0
[2025-10-13 02:34:17] 2025-10-13 06:33:56,542 | INFO     | pid: 176066
[2025-10-13 02:34:17] 2025-10-13 06:33:56,542 | INFO     | pgrp: 176066
[2025-10-13 02:34:17] 2025-10-13 06:33:56,542 | INFO     | corecount: 8
[2025-10-13 02:34:17] 2025-10-13 06:33:56,542 | INFO     | event service: False
[2025-10-13 02:34:17] 2025-10-13 06:33:56,542 | INFO     | sizes: {0: 2348624, 1: 2348680, 2: 2348736, 3: 2348935, 14: 2348935, 25: 2348963, 36: 2349119, 47: 2349147, 49: 2349465, 57: 2349493, 6789: 2376629, 6790: 2376908,
[2025-10-13 02:34:17] 2025-10-13 06:33:56,542 | INFO     | --------------------------------------------------
[2025-10-13 02:34:17] 2025-10-13 06:33:56,542 | INFO     | 
[2025-10-13 02:34:17] 2025-10-13 06:33:56,542 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 02:34:17] 2025-10-13 06:33:56,566 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 02:34:17] 2025-10-13 06:33:56,567 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 02:34:17] 2025-10-13 06:33:56,567 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 02:34:17] 2025-10-13 06:33:56,567 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 02:34:17] 2025-10-13 06:33:56,567 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 02:34:17] 2025-10-13 06:33:56,567 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 02:34:17] 2025-10-13 06:33:56,567 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 02:34:17] 2025-10-13 06:33:56,567 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 02:34:17] 2025-10-13 06:33:56,567 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 02:34:17] 2025-10-13 06:33:56,567 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 02:34:17] 2025-10-13 06:33:56,567 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 02:34:17] 2025-10-13 06:33:56,567 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 02:34:17] 2025-10-13 06:33:56,567 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 02:34:17] 2025-10-13 06:33:56,567 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 02:34:17] 2025-10-13 06:33:56,567 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 02:34:17] 2025-10-13 06:33:56,567 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 02:34:17] 2025-10-13 06:33:56,567 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 02:34:17] 2025-10-13 06:33:56,567 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 02:34:17] 2025-10-13 06:33:56,567 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 02:34:17] 2025-10-13 06:33:56,567 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 02:34:17] 2025-10-13 06:33:56,568 | INFO     | job 6840961687 has completed (purged errors)
[2025-10-13 02:34:17] 2025-10-13 06:33:56,568 | INFO     | overall cleanup function is called
[2025-10-13 02:34:17] 2025-10-13 06:33:57,576 | INFO     | --- collectZombieJob: --- 10, [176066]
[2025-10-13 02:34:17] 2025-10-13 06:33:57,576 | INFO     | zombie collector waiting for pid 176066
[2025-10-13 02:34:17] 2025-10-13 06:33:57,577 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 02:34:17] 2025-10-13 06:33:57,577 | INFO     | collected zombie processes
[2025-10-13 02:34:17] 2025-10-13 06:33:57,577 | INFO     | will attempt to kill all subprocesses of pid=176066
[2025-10-13 02:34:17] 2025-10-13 06:33:58,200 | INFO     | process IDs to be killed: [176066] (in reverse order)
[2025-10-13 02:34:17] 2025-10-13 06:33:58,214 | INFO     | PID=165396 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 02:34:17] 2025-10-13 06:33:58,215 | INFO     | .. there are 10 such processes running
[2025-10-13 02:34:17] 2025-10-13 06:33:58,300 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 02:34:17] 2025-10-13 06:33:58,300 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 02:34:17] 2025-10-13 06:33:58,311 | INFO     | did not find any defunct processes belonging to 176066
[2025-10-13 02:34:17] 2025-10-13 06:33:58,322 | INFO     | did not find any defunct processes belonging to 176066
[2025-10-13 02:34:17] 2025-10-13 06:33:58,322 | INFO     | ready for new job
[2025-10-13 02:34:17] 2025-10-13 06:33:58,323 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 02:34:17] 2025-10-13 06:33:58,326 | INFO     | ***************************************
[2025-10-13 02:34:17] 2025-10-13 06:33:58,327 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 02:34:17] 2025-10-13 06:33:58,327 | INFO     | ***************************************
[2025-10-13 02:34:17] 2025-10-13 06:33:58,327 | INFO     | 
[2025-10-13 02:34:17] 2025-10-13 06:33:58,355 | INFO     | architecture information:
[2025-10-13 02:34:17] 2025-10-13 06:33:58,356 | INFO     | executing command: cat /etc/os-release
[2025-10-13 02:34:17] 2025-10-13 06:33:58,376 | INFO     | cat /etc/os-release:
[2025-10-13 02:34:17] NAME="CentOS Linux"
[2025-10-13 02:34:17] VERSION="7 (Core)"
[2025-10-13 02:34:17] ID="centos"
[2025-10-13 02:34:17] ID_LIKE="rhel fedora"
[2025-10-13 02:34:17] VERSION_ID="7"
[2025-10-13 02:34:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 02:34:17] ANSI_COLOR="0;31"
[2025-10-13 02:34:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 02:34:17] HOME_URL="https://www.centos.org/"
[2025-10-13 02:34:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 02:34:17] 
[2025-10-13 02:34:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 02:34:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 02:34:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 02:34:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 02:34:17] 
[2025-10-13 02:34:17] 2025-10-13 06:33:58,376 | INFO     | ***************************************
[2025-10-13 02:34:17] 2025-10-13 06:33:58,879 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 02:34:17] 2025-10-13 06:33:58,898 | INFO     | sufficient remaining disk space (85171634176 B)
[2025-10-13 02:34:17] 2025-10-13 06:33:58,899 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 02:34:17] 2025-10-13 06:33:58,899 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 02:34:17] 2025-10-13 06:33:58,899 | INFO     | update_server=False
[2025-10-13 02:34:17] 2025-10-13 06:33:58,899 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 02:34:17] 2025-10-13 06:33:58,899 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 02:34:17] 2025-10-13 06:33:58,900 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 02:34:17] 2025-10-13 06:33:58,900 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 02:34:17] 2025-10-13 06:33:58,900 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 02:34:17] 2025-10-13 06:33:58,901 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 02:34:17] 2025-10-13 06:33:58,901 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 02:34:17] 2025-10-13 06:33:59,053 | INFO     | all job control threads have been joined
[2025-10-13 02:34:17] 2025-10-13 06:33:59,068 | INFO     | all data control threads have been joined
[2025-10-13 02:34:17] 2025-10-13 06:33:59,367 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 02:34:17] 2025-10-13 06:33:59,368 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 02:34:17] 2025-10-13 06:33:59,368 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 02:34:17] 2025-10-13 06:33:59,368 | INFO     | will abort loop
[2025-10-13 02:34:17] 2025-10-13 06:33:59,904 | INFO     | [job] retrieve thread has finished
[2025-10-13 02:34:17] 2025-10-13 06:33:59,984 | INFO     | [monitor] cgroup control has ended
[2025-10-13 02:34:17] 2025-10-13 06:34:00,004 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 02:34:17] 2025-10-13 06:34:00,056 | INFO     | [job] control thread has finished
[2025-10-13 02:34:17] 2025-10-13 06:34:00,074 | INFO     | [data] control thread has finished
[2025-10-13 02:34:17] 2025-10-13 06:34:00,145 | INFO     | [data] copytool_in thread has finished
[2025-10-13 02:34:17] 2025-10-13 06:34:00,342 | INFO     | all payload control threads have been joined
[2025-10-13 02:34:17] 2025-10-13 06:34:00,374 | INFO     | [job] job monitor thread has finished
[2025-10-13 02:34:17] 2025-10-13 06:34:00,528 | INFO     | [payload] failed_post thread has finished
[2025-10-13 02:34:17] 2025-10-13 06:34:00,631 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 02:34:17] 2025-10-13 06:34:00,870 | INFO     | [job] validate thread has finished
[2025-10-13 02:34:17] 2025-10-13 06:34:00,906 | INFO     | [data] copytool_out thread has finished
[2025-10-13 02:34:17] 2025-10-13 06:34:01,165 | INFO     | [payload] validate_post thread has finished
[2025-10-13 02:34:17] 2025-10-13 06:34:01,347 | INFO     | [payload] control thread has finished
[2025-10-13 02:34:17] 2025-10-13 06:34:01,373 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 02:34:17] 2025-10-13 06:34:01,549 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 02:34:17] 2025-10-13 06:34:02,553 | INFO     | [job] queue monitor thread has finished
[2025-10-13 02:34:17] 2025-10-13 06:34:02,908 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 02:34:17] 2025-10-13 06:34:09,561 | INFO     | job.realtimelogging is not enabled
[2025-10-13 02:34:17] 2025-10-13 06:34:10,566 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 02:34:17] 2025-10-13 06:34:11,814 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140638696384320)>', '<ExcThread(monitor, started 140638334990080)>']
[2025-10-13 02:34:17] 2025-10-13 06:34:11,957 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 02:34:17] 2025-10-13 06:34:11,957 | INFO     | [monitor] control thread has ended
[2025-10-13 02:34:17] 2025-10-13 06:34:16,840 | INFO     | all workflow threads have been joined
[2025-10-13 02:34:17] 2025-10-13 06:34:16,840 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 02:34:17] 2025-10-13 06:34:16,841 | INFO     | traces error code: 0
[2025-10-13 02:34:17] 2025-10-13 06:34:16,841 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 02:34:17] 2025-10-13 06:34:16,954 [wrapper] ==== pilot stdout END ====
[2025-10-13 02:34:17] 2025-10-13 06:34:16,956 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 02:34:17] 2025-10-13 06:34:16,959 [wrapper] pilotpid: 165396
[2025-10-13 02:34:17] 2025-10-13 06:34:16,962 [wrapper] Pilot exit status: 0
[2025-10-13 02:34:17] 2025-10-13 06:34:16,970 [wrapper] pandaids: 6840961687
[2025-10-13 02:34:17] 2025-10-13 06:34:17,024 [wrapper] cleanup supervisor_pilot  280831 165397
[2025-10-13 02:34:17] 2025-10-13 06:34:17,027 [wrapper] Test setup, not cleaning
[2025-10-13 02:34:17] 2025-10-13 06:34:17,030 [wrapper] apfmon messages muted
[2025-10-13 02:34:17] 2025-10-13 06:34:17,033 [wrapper] ==== wrapper stdout END ====
[2025-10-13 02:34:17] 2025-10-13 06:34:17,035 [wrapper] ==== wrapper stderr END ====
[2025-10-13 02:34:17]  *** Error codes and diagnostics ***
[2025-10-13 02:34:17]     "exeErrorCode": 0,
[2025-10-13 02:34:17]     "exeErrorDiag": "",
[2025-10-13 02:34:17]     "pilotErrorCode": 0,
[2025-10-13 02:34:17]     "pilotErrorDiag": "",
[2025-10-13 02:34:17]  *** Listing of results directory ***
[2025-10-13 02:34:17] total 412588
[2025-10-13 02:34:17] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 18:57 pilot3.tar.gz
[2025-10-13 02:34:17] -rwx------. 1 boincer umatlas     36292 Oct 12 19:10 runpilot2-wrapper.sh
[2025-10-13 02:34:17] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:10 queuedata.json
[2025-10-13 02:34:17] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 02:34:17] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:36 run_atlas
[2025-10-13 02:34:17] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:36 job.xml
[2025-10-13 02:34:17] -rw-r--r--. 2 boincer umatlas 221485032 Oct 13 00:36 EVNT.46676267._004648.pool.root.1
[2025-10-13 02:34:17] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:36 start_atlas.sh
[2025-10-13 02:34:17] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:36 shared
[2025-10-13 02:34:17] -rw-r--r--. 2 boincer umatlas    569675 Oct 13 00:36 input.tar.gz
[2025-10-13 02:34:17] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:36 boinc_lockfile
[2025-10-13 02:34:17] -rw-r--r--. 1 boincer umatlas      2547 Oct 13 00:36 pandaJob.out
[2025-10-13 02:34:17] -rw-------. 1 boincer umatlas    974365 Oct 13 00:38 agis_schedconf.cvmfs.json
[2025-10-13 02:34:17] -rw-------. 1 boincer umatlas   1560580 Oct 13 00:38 agis_ddmendpoints.agis.ALL.json
[2025-10-13 02:34:17] drwx------. 5 boincer umatlas      4096 Oct 13 00:38 pilot3
[2025-10-13 02:34:17] -rw-r--r--. 1 boincer umatlas      6898 Oct 13 02:29 init_data.xml
[2025-10-13 02:34:17] -rw-------. 1 boincer umatlas 194480520 Oct 13 02:33 HITS.46676269._091946.pool.root.1
[2025-10-13 02:34:17] -rw-r--r--. 1 boincer umatlas       530 Oct 13 02:33 boinc_task_state.xml
[2025-10-13 02:34:17] -rw-------. 1 boincer umatlas        95 Oct 13 02:33 pilot_heartbeat.json
[2025-10-13 02:34:17] -rw-------. 1 boincer umatlas      1028 Oct 13 02:33 memory_monitor_summary.json
[2025-10-13 02:34:17] -rw-------. 1 boincer umatlas    343919 Oct 13 02:33 log.46676269._091946.job.log.tgz.1
[2025-10-13 02:34:17] -rw-------. 1 boincer umatlas      7774 Oct 13 02:33 heartbeat.json
[2025-10-13 02:34:17] -rw-r--r--. 1 boincer umatlas        27 Oct 13 02:33 wrapper_checkpoint.txt
[2025-10-13 02:34:17] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 02:33 boinc_mmap_file
[2025-10-13 02:34:17] -rw-------. 1 boincer umatlas      4810 Oct 13 02:34 pilotlog.txt
[2025-10-13 02:34:17] -rw-------. 1 boincer umatlas    967357 Oct 13 02:34 log.46676269._091946.job.log.1
[2025-10-13 02:34:17] -rw-------. 1 boincer umatlas       357 Oct 13 02:34 output.list
[2025-10-13 02:34:17] -rw-r--r--. 1 boincer umatlas       620 Oct 13 02:34 runtime_log
[2025-10-13 02:34:17] -rw-------. 1 boincer umatlas   1331200 Oct 13 02:34 result.tar.gz
[2025-10-13 02:34:17] -rw-r--r--. 1 boincer umatlas      8703 Oct 13 02:34 runtime_log.err
[2025-10-13 02:34:17] -rw-------. 1 boincer umatlas       652 Oct 13 02:34 2e2NDmtNKS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmHGVMDmTJxoln.diag
[2025-10-13 02:34:17] -rw-r--r--. 1 boincer umatlas     21101 Oct 13 02:34 stderr.txt
[2025-10-13 02:34:17] HITS file was successfully produced:
[2025-10-13 02:34:17] -rw-------. 1 boincer umatlas 194480520 Oct 13 02:33 shared/HITS.pool.root.1
[2025-10-13 02:34:17]  *** Contents of shared directory: ***
[2025-10-13 02:34:17] total 408104
[2025-10-13 02:34:17] -rw-r--r--. 2 boincer umatlas 221485032 Oct 13 00:36 ATLAS.root_0
[2025-10-13 02:34:17] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:36 start_atlas.sh
[2025-10-13 02:34:17] -rw-r--r--. 2 boincer umatlas    569675 Oct 13 00:36 input.tar.gz
[2025-10-13 02:34:17] -rw-------. 1 boincer umatlas 194480520 Oct 13 02:33 HITS.pool.root.1
[2025-10-13 02:34:17] -rw-------. 1 boincer umatlas   1331200 Oct 13 02:34 result.tar.gz
02:34:18 (161277): run_atlas exited; CPU time 34727.409071
02:34:18 (161277): called boinc_finish(0)

</stderr_txt>
]]>

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