Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:13 (1680077): wrapper (7.7.26015): starting
00:02:13 (1680077): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 00:02:13] Arguments: --nthreads 9
[2025-10-13 00:02:13] Threads: 9
[2025-10-13 00:02:13] Checking for CVMFS
[2025-10-13 00:02:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:02:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:02:15] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:02:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:02:16] 2.13.2.0 4249 75371 418532 151647 3 430 38202425 39288832 22081 16776704 0 132452094 99.541 163274823 29464 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:02:16] CVMFS is ok
[2025-10-13 00:02:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:02:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:02:17] Further information can be found at the LHC@home message board.
[2025-10-13 00:02:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:02:17] Checking for apptainer binary...
[2025-10-13 00:02:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:02:17] Running /usr/bin/apptainer --version
[2025-10-13 00:02:17] apptainer version 1.4.3-1.el9
[2025-10-13 00:02:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:02:18] c-211-29.aglt2.org
[2025-10-13 00:02:18] apptainer works
[2025-10-13 00:02:18] Set ATHENA_PROC_NUMBER=9
[2025-10-13 00:02:18] Set ATHENA_CORE_NUMBER=9
[2025-10-13 00:02:19] Starting ATLAS job with PandaID=6840961646
[2025-10-13 00:02:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 15:30:23]  *** The last 200 lines of the pilot log: ***
[2025-10-13 15:30:23] 2025-10-13 19:29:34,563 | INFO     | sum of square deviations: 226788796920.072
[2025-10-13 15:30:23] 2025-10-13 19:29:34,617 | INFO     | sum of deviations: 749718998245.5024
[2025-10-13 15:30:23] 2025-10-13 19:29:34,618 | INFO     | mean x: 1760355982.7336292
[2025-10-13 15:30:23] 2025-10-13 19:29:34,618 | INFO     | mean y: 2541881.8645948945
[2025-10-13 15:30:23] 2025-10-13 19:29:34,618 | INFO     | -- intersect: -5816847531.782967
[2025-10-13 15:30:23] 2025-10-13 19:29:34,618 | INFO     | intersect: -5816847531.782967
[2025-10-13 15:30:23] 2025-10-13 19:29:34,620 | INFO     | chi2: 5.7061603034912665
[2025-10-13 15:30:23] 2025-10-13 19:29:34,620 | INFO     | current chi2=5.7061603034912665 (change=10.672359941884235 %)
[2025-10-13 15:30:23] 2025-10-13 19:29:34,620 | INFO     | right removable region: 900
[2025-10-13 15:30:23] 2025-10-13 19:29:34,622 | INFO     | sum of square deviations: 226787898631.60254
[2025-10-13 15:30:23] 2025-10-13 19:29:34,711 | INFO     | time since job start (55521s) is within the limit (172800.0s)
[2025-10-13 15:30:23] 2025-10-13 19:29:34,726 | INFO     | sum of deviations: 396246500868.08026
[2025-10-13 15:30:23] 2025-10-13 19:29:34,726 | INFO     | mean x: 1760356287.734739
[2025-10-13 15:30:23] 2025-10-13 19:29:34,727 | INFO     | mean y: 2551774.514983352
[2025-10-13 15:30:23] 2025-10-13 19:29:34,727 | INFO     | -- intersect: -3073163567.9032626
[2025-10-13 15:30:23] 2025-10-13 19:29:34,727 | INFO     | intersect: -3073163567.9032626
[2025-10-13 15:30:23] 2025-10-13 19:29:34,741 | INFO     | chi2: 2.5943583264339765
[2025-10-13 15:30:23] 2025-10-13 19:29:34,741 | INFO     | current chi2=2.5943583264339765 (change=59.38636588536133 %)
[2025-10-13 15:30:23] 2025-10-13 19:29:34,742 | INFO     | sum of square deviations: 223032558976.4453
[2025-10-13 15:30:23] 2025-10-13 19:29:34,901 | INFO     | sum of deviations: 217535756981.99207
[2025-10-13 15:30:23] 2025-10-13 19:29:34,901 | INFO     | mean x: 1760356440.2421875
[2025-10-13 15:30:23] 2025-10-13 19:29:34,901 | INFO     | mean y: 2559026.106026786
[2025-10-13 15:30:23] 2025-10-13 19:29:34,902 | INFO     | -- intersect: -1714412130.6776419
[2025-10-13 15:30:23] 2025-10-13 19:29:34,902 | INFO     | intersect: -1714412130.6776419
[2025-10-13 15:30:23] 2025-10-13 19:29:34,916 | INFO     | chi2: 1.2113016471990998
[2025-10-13 15:30:23] 2025-10-13 19:29:34,917 | INFO     | current chi2=1.2113016471990998 (change=53.31016402564289 %)
[2025-10-13 15:30:23] 2025-10-13 19:29:34,940 | INFO     | sum of square deviations: 219318949423.68524
[2025-10-13 15:30:23] 2025-10-13 19:29:35,047 | INFO     | sum of deviations: 122388868671.9017
[2025-10-13 15:30:23] 2025-10-13 19:29:35,048 | INFO     | mean x: 1760356592.7485971
[2025-10-13 15:30:23] 2025-10-13 19:29:35,048 | INFO     | mean y: 2562932.3209876544
[2025-10-13 15:30:23] 2025-10-13 19:29:35,048 | INFO     | -- intersect: -979787441.0132245
[2025-10-13 15:30:23] 2025-10-13 19:29:35,048 | INFO     | intersect: -979787441.0132245
[2025-10-13 15:30:23] 2025-10-13 19:29:35,050 | INFO     | chi2: 0.8517685676604138
[2025-10-13 15:30:23] 2025-10-13 19:29:35,050 | INFO     | current chi2=0.8517685676604138 (change=29.681547975274086 %)
[2025-10-13 15:30:23] 2025-10-13 19:29:35,065 | INFO     | sum of square deviations: 215646890969.36798
[2025-10-13 15:30:23] 2025-10-13 19:29:35,181 | INFO     | sum of deviations: 69750997223.10606
[2025-10-13 15:30:23] 2025-10-13 19:29:35,181 | INFO     | mean x: 1760356745.2528217
[2025-10-13 15:30:23] 2025-10-13 19:29:35,210 | INFO     | mean y: 2565117.057562077
[2025-10-13 15:30:23] 2025-10-13 19:29:35,210 | INFO     | -- intersect: -566822356.593737
[2025-10-13 15:30:23] 2025-10-13 19:29:35,210 | INFO     | intersect: -566822356.593737
[2025-10-13 15:30:23] 2025-10-13 19:29:35,211 | INFO     | chi2: 0.739082913918907
[2025-10-13 15:30:23] 2025-10-13 19:29:35,212 | INFO     | current chi2=0.739082913918907 (change=13.229609311720067 %)
[2025-10-13 15:30:23] 2025-10-13 19:29:35,212 | INFO     | left removable region: 40
[2025-10-13 15:30:23] 2025-10-13 19:29:35,216 | INFO     | sum of square deviations: 197213176866.73947
[2025-10-13 15:30:23] 2025-10-13 19:29:35,341 | INFO     | sum of deviations: 118358108653.06502
[2025-10-13 15:30:23] 2025-10-13 19:29:35,341 | INFO     | mean x: 1760357172.2534883
[2025-10-13 15:30:23] 2025-10-13 19:29:35,342 | INFO     | mean y: 2567729.3116279067
[2025-10-13 15:30:23] 2025-10-13 19:29:35,342 | INFO     | -- intersect: -1053916166.8053554
[2025-10-13 15:30:23] 2025-10-13 19:29:35,342 | INFO     | intersect: -1053916166.8053554
[2025-10-13 15:30:23] 2025-10-13 19:29:35,405 | INFO     | chi2: 0.023857296522354923
[2025-10-13 15:30:23] 2025-10-13 19:29:35,405 | INFO     | -- intersect: -1053916166.8053554
[2025-10-13 15:30:23] 2025-10-13 19:29:35,405 | INFO     | current memory leak: 0.60 B/s (using 860 data points, chi2=0.02)
[2025-10-13 15:30:23] 2025-10-13 19:29:35,406 | INFO     | could have reported an average CPU frequency of 2899 MHz (33 samples)
[2025-10-13 15:30:23] 2025-10-13 19:29:35,407 | INFO     | ..............................
[2025-10-13 15:30:23] 2025-10-13 19:29:35,407 | INFO     | . Timing measurements:
[2025-10-13 15:30:23] 2025-10-13 19:29:35,407 | INFO     | . get job = 0 s
[2025-10-13 15:30:23] 2025-10-13 19:29:35,407 | INFO     | . initial setup = 8 s
[2025-10-13 15:30:23] 2025-10-13 19:29:35,407 | INFO     | . payload setup = 80 s
[2025-10-13 15:30:23] 2025-10-13 19:29:35,408 | INFO     | . stage-in = 1 s
[2025-10-13 15:30:23] 2025-10-13 19:29:35,408 | INFO     | . payload execution = 55287 s
[2025-10-13 15:30:23] 2025-10-13 19:29:35,408 | INFO     | . stage-out = 3 s
[2025-10-13 15:30:23] 2025-10-13 19:29:35,408 | INFO     | . log creation = 0 s
[2025-10-13 15:30:23] 2025-10-13 19:29:35,408 | INFO     | ..............................
[2025-10-13 15:30:23] 2025-10-13 19:29:36,728 | INFO     | time since job start (55523s) is within the limit (172800.0s)
[2025-10-13 15:30:23] 2025-10-13 19:29:36,742 | INFO     | 
[2025-10-13 15:30:23] 2025-10-13 19:29:36,743 | INFO     | job summary report
[2025-10-13 15:30:23] 2025-10-13 19:29:36,743 | INFO     | --------------------------------------------------
[2025-10-13 15:30:23] 2025-10-13 19:29:36,743 | INFO     | PanDA job id: 6840961646
[2025-10-13 15:30:23] 2025-10-13 19:29:36,743 | INFO     | task id: 46676269
[2025-10-13 15:30:23] 2025-10-13 19:29:36,743 | INFO     | errors: (none)
[2025-10-13 15:30:23] 2025-10-13 19:29:36,744 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 15:30:23] 2025-10-13 19:29:36,744 | INFO     | pilot state: finished 
[2025-10-13 15:30:23] 2025-10-13 19:29:36,744 | INFO     | transexitcode: 0
[2025-10-13 15:30:23] 2025-10-13 19:29:36,744 | INFO     | exeerrorcode: 0
[2025-10-13 15:30:23] 2025-10-13 19:29:36,744 | INFO     | exeerrordiag: 
[2025-10-13 15:30:23] 2025-10-13 19:29:36,744 | INFO     | exitcode: 0
[2025-10-13 15:30:23] 2025-10-13 19:29:36,745 | INFO     | exitmsg: OK
[2025-10-13 15:30:23] 2025-10-13 19:29:36,745 | INFO     | cpuconsumptiontime: 78931 s
[2025-10-13 15:30:23] 2025-10-13 19:29:36,745 | INFO     | nevents: 400
[2025-10-13 15:30:23] 2025-10-13 19:29:36,745 | INFO     | neventsw: 0
[2025-10-13 15:30:23] 2025-10-13 19:29:36,745 | INFO     | pid: 1715545
[2025-10-13 15:30:23] 2025-10-13 19:29:36,745 | INFO     | pgrp: 1715545
[2025-10-13 15:30:23] 2025-10-13 19:29:36,745 | INFO     | corecount: 9
[2025-10-13 15:30:23] 2025-10-13 19:29:36,746 | INFO     | event service: False
[2025-10-13 15:30:23] 2025-10-13 19:29:36,746 | INFO     | sizes: {0: 2348028, 2: 2348629, 3: 2348713, 7: 2348741, 8: 2348769, 9: 2348769, 10: 2349096, 11: 2349124, 24: 2349152, 36: 2349180, 47: 2349208, 60: 2349544, 70: 2
[2025-10-13 15:30:23] 2025-10-13 19:29:36,746 | INFO     | --------------------------------------------------
[2025-10-13 15:30:23] 2025-10-13 19:29:36,746 | INFO     | 
[2025-10-13 15:30:23] 2025-10-13 19:29:36,765 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 15:30:23] 2025-10-13 19:29:36,795 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 15:30:23] 2025-10-13 19:29:36,796 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 15:30:23] 2025-10-13 19:29:36,796 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 15:30:23] 2025-10-13 19:29:36,796 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 15:30:23] 2025-10-13 19:29:36,796 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 15:30:23] 2025-10-13 19:29:36,796 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 15:30:23] 2025-10-13 19:29:36,796 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 15:30:23] 2025-10-13 19:29:36,797 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 15:30:23] 2025-10-13 19:29:36,797 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 15:30:23] 2025-10-13 19:29:36,797 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 15:30:23] 2025-10-13 19:29:36,797 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 15:30:23] 2025-10-13 19:29:36,797 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 15:30:23] 2025-10-13 19:29:36,797 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 15:30:23] 2025-10-13 19:29:36,798 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 15:30:23] 2025-10-13 19:29:36,798 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 15:30:23] 2025-10-13 19:29:36,798 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 15:30:23] 2025-10-13 19:29:36,798 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 15:30:23] 2025-10-13 19:29:36,798 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 15:30:23] 2025-10-13 19:29:36,798 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 15:30:23] 2025-10-13 19:29:36,798 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 15:30:23] 2025-10-13 19:29:36,799 | INFO     | job 6840961646 has completed (purged errors)
[2025-10-13 15:30:23] 2025-10-13 19:29:36,799 | INFO     | overall cleanup function is called
[2025-10-13 15:30:23] 2025-10-13 19:29:37,808 | INFO     | --- collectZombieJob: --- 10, [1715545]
[2025-10-13 15:30:23] 2025-10-13 19:29:37,809 | INFO     | zombie collector waiting for pid 1715545
[2025-10-13 15:30:23] 2025-10-13 19:29:37,809 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 15:30:23] 2025-10-13 19:29:37,809 | INFO     | collected zombie processes
[2025-10-13 15:30:23] 2025-10-13 19:29:37,809 | INFO     | will attempt to kill all subprocesses of pid=1715545
[2025-10-13 15:30:23] 2025-10-13 19:29:38,877 | INFO     | process IDs to be killed: [1715545] (in reverse order)
[2025-10-13 15:30:23] 2025-10-13 19:29:39,560 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 15:30:23] 2025-10-13 19:29:39,561 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 15:30:23] 2025-10-13 19:29:39,673 | INFO     | did not find any defunct processes belonging to 1715545
[2025-10-13 15:30:23] 2025-10-13 19:29:39,866 | INFO     | did not find any defunct processes belonging to 1715545
[2025-10-13 15:30:23] 2025-10-13 19:29:39,866 | INFO     | ready for new job
[2025-10-13 15:30:23] 2025-10-13 19:29:39,866 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 15:30:23] 2025-10-13 19:29:39,901 | INFO     | ***************************************
[2025-10-13 15:30:23] 2025-10-13 19:29:39,901 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 15:30:23] 2025-10-13 19:29:39,901 | INFO     | ***************************************
[2025-10-13 15:30:23] 2025-10-13 19:29:39,901 | INFO     | 
[2025-10-13 15:30:23] 2025-10-13 19:29:39,943 | INFO     | architecture information:
[2025-10-13 15:30:23] 2025-10-13 19:29:39,979 | INFO     | executing command: cat /etc/os-release
[2025-10-13 15:30:23] 2025-10-13 19:29:40,097 | INFO     | cat /etc/os-release:
[2025-10-13 15:30:23] NAME="CentOS Linux"
[2025-10-13 15:30:23] VERSION="7 (Core)"
[2025-10-13 15:30:23] ID="centos"
[2025-10-13 15:30:23] ID_LIKE="rhel fedora"
[2025-10-13 15:30:23] VERSION_ID="7"
[2025-10-13 15:30:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 15:30:23] ANSI_COLOR="0;31"
[2025-10-13 15:30:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 15:30:23] HOME_URL="https://www.centos.org/"
[2025-10-13 15:30:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 15:30:23] 
[2025-10-13 15:30:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 15:30:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 15:30:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 15:30:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 15:30:23] 
[2025-10-13 15:30:23] 2025-10-13 19:29:40,097 | INFO     | ***************************************
[2025-10-13 15:30:23] 2025-10-13 19:29:40,608 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 15:30:23] 2025-10-13 19:29:40,696 | INFO     | sufficient remaining disk space (52962525184 B)
[2025-10-13 15:30:23] 2025-10-13 19:29:40,698 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 15:30:23] 2025-10-13 19:29:40,714 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 15:30:23] 2025-10-13 19:29:40,719 | INFO     | update_server=False
[2025-10-13 15:30:23] 2025-10-13 19:29:40,720 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 15:30:23] 2025-10-13 19:29:40,720 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:30:23] 2025-10-13 19:29:40,720 | INFO     | aborting loop
[2025-10-13 15:30:23] 2025-10-13 19:29:40,721 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 15:30:23] 2025-10-13 19:29:41,106 | INFO     | all data control threads have been joined
[2025-10-13 15:30:23] 2025-10-13 19:29:41,423 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 15:30:23] 2025-10-13 19:29:41,726 | INFO     | [job] retrieve thread has finished
[2025-10-13 15:30:23] 2025-10-13 19:29:41,727 | INFO     | [job] job monitor thread has finished
[2025-10-13 15:30:23] 2025-10-13 19:29:41,732 | INFO     | all payload control threads have been joined
[2025-10-13 15:30:23] 2025-10-13 19:29:41,846 | INFO     | [job] validate thread has finished
[2025-10-13 15:30:23] 2025-10-13 19:29:41,859 | INFO     | [data] copytool_in thread has finished
[2025-10-13 15:30:23] 2025-10-13 19:29:41,928 | INFO     | all job control threads have been joined
[2025-10-13 15:30:23] 2025-10-13 19:29:42,010 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 15:30:23] 2025-10-13 19:29:42,112 | INFO     | [data] control thread has finished
[2025-10-13 15:30:23] 2025-10-13 19:29:42,190 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 15:30:23] 2025-10-13 19:29:42,251 | INFO     | [payload] validate_post thread has finished
[2025-10-13 15:30:23] 2025-10-13 19:29:42,319 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 15:30:23] 2025-10-13 19:29:42,397 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 15:30:23] 2025-10-13 19:29:42,430 | INFO     | [job] queue monitor thread has finished
[2025-10-13 15:30:23] 2025-10-13 19:29:42,727 | INFO     | [data] copytool_out thread has finished
[2025-10-13 15:30:23] 2025-10-13 19:29:42,738 | INFO     | [payload] control thread has finished
[2025-10-13 15:30:23] 2025-10-13 19:29:42,934 | INFO     | [job] control thread has finished
[2025-10-13 15:30:23] 2025-10-13 19:29:43,129 | INFO     | [payload] failed_post thread has finished
[2025-10-13 15:30:23] 2025-10-13 19:29:46,019 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 15:30:23] 2025-10-13 19:29:51,525 | INFO     | job.realtimelogging is not enabled
[2025-10-13 15:30:23] 2025-10-13 19:29:52,531 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 15:30:23] 2025-10-13 19:30:11,983 | INFO     | PID=1689613 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 15:30:23] 2025-10-13 19:30:11,983 | INFO     | .. there are 30 such processes running
[2025-10-13 15:30:23] 2025-10-13 19:30:11,984 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 15:30:23] 2025-10-13 19:30:11,984 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 15:30:23] 2025-10-13 19:30:11,984 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 15:30:23] 2025-10-13 19:30:14,755 | INFO     | [monitor] cgroup control has ended
[2025-10-13 15:30:23] 2025-10-13 19:30:15,809 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140632814028608)>', '<ExcThread(monitor, started 140632169367296)>']
[2025-10-13 15:30:23] 2025-10-13 19:30:16,008 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 15:30:23] 2025-10-13 19:30:16,008 | INFO     | [monitor] control thread has ended
[2025-10-13 15:30:23] 2025-10-13 19:30:20,835 | INFO     | all workflow threads have been joined
[2025-10-13 15:30:23] 2025-10-13 19:30:20,836 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 15:30:23] 2025-10-13 19:30:20,836 | INFO     | traces error code: 0
[2025-10-13 15:30:23] 2025-10-13 19:30:20,837 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 15:30:23] 2025-10-13 19:30:21,725 [wrapper] ==== pilot stdout END ====
[2025-10-13 15:30:23] 2025-10-13 19:30:21,795 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 15:30:23] 2025-10-13 19:30:21,799 [wrapper] pilotpid: 1689613
[2025-10-13 15:30:23] 2025-10-13 19:30:21,807 [wrapper] Pilot exit status: 0
[2025-10-13 15:30:23] 2025-10-13 19:30:21,970 [wrapper] pandaids: 6840961646
[2025-10-13 15:30:23] 2025-10-13 19:30:22,164 [wrapper] cleanup supervisor_pilot 1689415 1689614
[2025-10-13 15:30:23] 2025-10-13 19:30:22,196 [wrapper] Test setup, not cleaning
[2025-10-13 15:30:23] 2025-10-13 19:30:22,243 [wrapper] apfmon messages muted
[2025-10-13 15:30:23] 2025-10-13 19:30:22,276 [wrapper] ==== wrapper stdout END ====
[2025-10-13 15:30:23] 2025-10-13 19:30:22,323 [wrapper] ==== wrapper stderr END ====
[2025-10-13 15:30:23]  *** Error codes and diagnostics ***
[2025-10-13 15:30:23]     "exeErrorCode": 0,
[2025-10-13 15:30:23]     "exeErrorDiag": "",
[2025-10-13 15:30:23]     "pilotErrorCode": 0,
[2025-10-13 15:30:23]     "pilotErrorDiag": "",
[2025-10-13 15:30:23]  *** Listing of results directory ***
[2025-10-13 15:30:23] total 422252
[2025-10-13 15:30:23] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 18:57 pilot3.tar.gz
[2025-10-13 15:30:23] -rwx------. 1 boincer umatlas     36292 Oct 12 19:10 runpilot2-wrapper.sh
[2025-10-13 15:30:23] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:10 queuedata.json
[2025-10-13 15:30:23] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 15:30:23] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:02 run_atlas
[2025-10-13 15:30:23] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:02 job.xml
[2025-10-13 15:30:23] -rw-r--r--. 2 boincer umatlas 221002967 Oct 13 00:02 EVNT.46676267._004647.pool.root.1
[2025-10-13 15:30:23] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:02 start_atlas.sh
[2025-10-13 15:30:23] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:02 shared
[2025-10-13 15:30:23] -rw-r--r--. 2 boincer umatlas    569678 Oct 13 00:02 input.tar.gz
[2025-10-13 15:30:23] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:02 boinc_lockfile
[2025-10-13 15:30:23] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 00:02 pandaJob.out
[2025-10-13 15:30:23] -rw-------. 1 boincer umatlas    974373 Oct 13 00:04 agis_schedconf.cvmfs.json
[2025-10-13 15:30:23] drwx------. 5 boincer umatlas      4096 Oct 13 00:04 pilot3
[2025-10-13 15:30:23] -rw-r--r--. 1 boincer umatlas      6524 Oct 13 15:27 init_data.xml
[2025-10-13 15:30:23] -rw-------. 1 boincer umatlas 194917797 Oct 13 15:28 HITS.46676269._091932.pool.root.1
[2025-10-13 15:30:23] -rw-r--r--. 1 boincer umatlas       531 Oct 13 15:28 boinc_task_state.xml
[2025-10-13 15:30:23] -rw-------. 1 boincer umatlas      1046 Oct 13 15:29 memory_monitor_summary.json
[2025-10-13 15:30:23] -rw-------. 1 boincer umatlas        95 Oct 13 15:29 pilot_heartbeat.json
[2025-10-13 15:30:23] -rw-------. 1 boincer umatlas   1560580 Oct 13 15:29 agis_ddmendpoints.agis.ALL.json
[2025-10-13 15:30:23] -rw-------. 1 boincer umatlas    886759 Oct 13 15:29 log.46676269._091932.job.log.tgz.1
[2025-10-13 15:30:23] -rw-------. 1 boincer umatlas      7825 Oct 13 15:29 heartbeat.json
[2025-10-13 15:30:23] -rw-------. 1 boincer umatlas      4896 Oct 13 15:30 pilotlog.txt
[2025-10-13 15:30:23] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 15:30 boinc_mmap_file
[2025-10-13 15:30:23] -rw-r--r--. 1 boincer umatlas        28 Oct 13 15:30 wrapper_checkpoint.txt
[2025-10-13 15:30:23] -rw-------. 1 boincer umatlas   5396589 Oct 13 15:30 log.46676269._091932.job.log.1
[2025-10-13 15:30:23] -rw-------. 1 boincer umatlas       357 Oct 13 15:30 output.list
[2025-10-13 15:30:23] -rw-r--r--. 1 boincer umatlas       620 Oct 13 15:30 runtime_log
[2025-10-13 15:30:23] -rw-------. 1 boincer umatlas   6297600 Oct 13 15:30 result.tar.gz
[2025-10-13 15:30:23] -rw-r--r--. 1 boincer umatlas      8704 Oct 13 15:30 runtime_log.err
[2025-10-13 15:30:23] -rw-------. 1 boincer umatlas       660 Oct 13 15:30 9CgNDmtNKS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm3FVMDmR77w4n.diag
[2025-10-13 15:30:23] -rw-r--r--. 1 boincer umatlas     21106 Oct 13 15:30 stderr.txt
[2025-10-13 15:30:23] HITS file was successfully produced:
[2025-10-13 15:30:23] -rw-------. 1 boincer umatlas 194917797 Oct 13 15:28 shared/HITS.pool.root.1
[2025-10-13 15:30:23]  *** Contents of shared directory: ***
[2025-10-13 15:30:23] total 412912
[2025-10-13 15:30:23] -rw-r--r--. 2 boincer umatlas 221002967 Oct 13 00:02 ATLAS.root_0
[2025-10-13 15:30:23] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:02 start_atlas.sh
[2025-10-13 15:30:23] -rw-r--r--. 2 boincer umatlas    569678 Oct 13 00:02 input.tar.gz
[2025-10-13 15:30:23] -rw-------. 1 boincer umatlas 194917797 Oct 13 15:28 HITS.pool.root.1
[2025-10-13 15:30:23] -rw-------. 1 boincer umatlas   6297600 Oct 13 15:30 result.tar.gz
15:30:24 (1680077): run_atlas exited; CPU time 81176.837132
15:30:24 (1680077): called boinc_finish(0)

</stderr_txt>
]]>

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