Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:10:14 (2908170): wrapper (7.7.26015): starting
00:10:14 (2908170): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 00:10:14] Arguments: --nthreads 9
[2025-10-13 00:10:14] Threads: 9
[2025-10-13 00:10:14] Checking for CVMFS
[2025-10-13 00:10:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:10:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:10:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:10:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:10:18] 2.13.2.0 2126255 8022 235372 151647 0 805 27817945 40960001 24827 16776704 0 18425283 99.727 15457490 32237 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:10:18] CVMFS is ok
[2025-10-13 00:10:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:10:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:10:18] Further information can be found at the LHC@home message board.
[2025-10-13 00:10:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:10:18] Checking for apptainer binary...
[2025-10-13 00:10:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:10:18] Running /usr/bin/apptainer --version
[2025-10-13 00:10:19] apptainer version 1.4.3-1.el9
[2025-10-13 00:10:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:10:20] c6-8-12-3.aglt2.org
[2025-10-13 00:10:20] apptainer works
[2025-10-13 00:10:20] Set ATHENA_PROC_NUMBER=9
[2025-10-13 00:10:20] Set ATHENA_CORE_NUMBER=9
[2025-10-13 00:10:20] Starting ATLAS job with PandaID=6840852388
[2025-10-13 00:10:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:06:11]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:06:11] 2025-10-13 11:05:14,770 | INFO     | time since job start (24781s) is within the limit (172800.0s)
[2025-10-13 07:06:11] 2025-10-13 11:05:16,009 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 07:06:11] 2025-10-13 11:05:16,034 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2710.0614107142856
[2025-10-13 07:06:11] 2025-10-13 11:05:16,194 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6840852388/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 07:06:11] 2025-10-13 11:05:16,195 | INFO     | extracted standard info from prmon json
[2025-10-13 07:06:11] 2025-10-13 11:05:16,195 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 07:06:11] 2025-10-13 11:05:16,195 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 07:06:11] 2025-10-13 11:05:16,206 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:06:11] 2025-10-13 11:05:16,206 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:06:11] 2025-10-13 11:05:16,253 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:06:11] 2025-10-13 11:05:16,254 | INFO     | sum of square deviations: 20143721918.65674
[2025-10-13 07:06:11] 2025-10-13 11:05:16,275 | INFO     | sum of deviations: 108670880352.64175
[2025-10-13 07:06:11] 2025-10-13 11:05:16,275 | INFO     | mean x: 1760341194.6716418
[2025-10-13 07:06:11] 2025-10-13 11:05:16,275 | INFO     | mean y: 2153131.345771144
[2025-10-13 07:06:11] 2025-10-13 11:05:16,275 | INFO     | -- intersect: -9494494415.640665
[2025-10-13 07:06:11] 2025-10-13 11:05:16,276 | INFO     | intersect: -9494494415.640665
[2025-10-13 07:06:11] 2025-10-13 11:05:16,276 | INFO     | chi2: 6.706013114261905
[2025-10-13 07:06:11] 2025-10-13 11:05:16,294 | INFO     | sum of square deviations: 19401443568.302216
[2025-10-13 07:06:11] 2025-10-13 11:05:16,316 | INFO     | sum of deviations: 155385296133.90683
[2025-10-13 07:06:11] 2025-10-13 11:05:16,316 | INFO     | mean x: 1760341042.1788414
[2025-10-13 07:06:11] 2025-10-13 11:05:16,316 | INFO     | mean y: 2162662.5365239293
[2025-10-13 07:06:11] 2025-10-13 11:05:16,316 | INFO     | -- intersect: -14096330223.968088
[2025-10-13 07:06:11] 2025-10-13 11:05:16,316 | INFO     | intersect: -14096330223.968088
[2025-10-13 07:06:11] 2025-10-13 11:05:16,317 | INFO     | chi2: 5.286897622734594
[2025-10-13 07:06:11] 2025-10-13 11:05:16,317 | INFO     | current chi2=5.286897622734594 (change=21.161835912745683 %)
[2025-10-13 07:06:11] 2025-10-13 11:05:16,317 | INFO     | right removable region: 396
[2025-10-13 07:06:11] 2025-10-13 11:05:16,318 | INFO     | sum of square deviations: 19401229454.206425
[2025-10-13 07:06:11] 2025-10-13 11:05:16,338 | INFO     | sum of deviations: 3465906267.0176086
[2025-10-13 07:06:11] 2025-10-13 11:05:16,338 | INFO     | mean x: 1760341347.186398
[2025-10-13 07:06:11] 2025-10-13 11:05:16,338 | INFO     | mean y: 2174710.040302267
[2025-10-13 07:06:11] 2025-10-13 11:05:16,338 | INFO     | -- intersect: -312299077.3918002
[2025-10-13 07:06:11] 2025-10-13 11:05:16,338 | INFO     | intersect: -312299077.3918002
[2025-10-13 07:06:11] 2025-10-13 11:05:16,360 | INFO     | chi2: 3.21229759386612
[2025-10-13 07:06:11] 2025-10-13 11:05:16,360 | INFO     | current chi2=3.21229759386612 (change=52.09825064262971 %)
[2025-10-13 07:06:11] 2025-10-13 11:05:16,361 | INFO     | sum of square deviations: 18677347510.405598
[2025-10-13 07:06:11] 2025-10-13 11:05:16,384 | INFO     | sum of deviations: -42813972374.90307
[2025-10-13 07:06:11] 2025-10-13 11:05:16,385 | INFO     | mean x: 1760341499.6862245
[2025-10-13 07:06:11] 2025-10-13 11:05:16,385 | INFO     | mean y: 2184441.9438775512
[2025-10-13 07:06:11] 2025-10-13 11:05:16,385 | INFO     | -- intersect: 4037404769.4541187
[2025-10-13 07:06:11] 2025-10-13 11:05:16,385 | INFO     | intersect: 4037404769.4541187
[2025-10-13 07:06:11] 2025-10-13 11:05:16,385 | INFO     | chi2: 2.500400214337138
[2025-10-13 07:06:11] 2025-10-13 11:05:16,385 | INFO     | current chi2=2.500400214337138 (change=22.161626023950866 %)
[2025-10-13 07:06:11] 2025-10-13 11:05:16,386 | INFO     | left removable region: 20
[2025-10-13 07:06:11] 2025-10-13 11:05:16,386 | INFO     | sum of square deviations: 16482211562.978773
[2025-10-13 07:06:11] 2025-10-13 11:05:16,413 | INFO     | sum of deviations: -36298129791.31921
[2025-10-13 07:06:11] 2025-10-13 11:05:16,413 | INFO     | mean x: 1760341621.712766
[2025-10-13 07:06:11] 2025-10-13 11:05:16,414 | INFO     | mean y: 2203857.9414893617
[2025-10-13 07:06:11] 2025-10-13 11:05:16,414 | INFO     | -- intersect: 3878935352.246093
[2025-10-13 07:06:11] 2025-10-13 11:05:16,414 | INFO     | intersect: 3878935352.246093
[2025-10-13 07:06:11] 2025-10-13 11:05:16,414 | INFO     | chi2: 0.6746004359531103
[2025-10-13 07:06:11] 2025-10-13 11:05:16,414 | INFO     | -- intersect: 3878935352.246093
[2025-10-13 07:06:11] 2025-10-13 11:05:16,414 | INFO     | current memory leak: -2.20 B/s (using 376 data points, chi2=0.67)
[2025-10-13 07:06:11] 2025-10-13 11:05:16,415 | INFO     | could have reported an average CPU frequency of 2782 MHz (17 samples)
[2025-10-13 07:06:11] 2025-10-13 11:05:16,415 | INFO     | ..............................
[2025-10-13 07:06:11] 2025-10-13 11:05:16,433 | INFO     | . Timing measurements:
[2025-10-13 07:06:11] 2025-10-13 11:05:16,433 | INFO     | . get job = 1 s
[2025-10-13 07:06:11] 2025-10-13 11:05:16,433 | INFO     | . initial setup = 9 s
[2025-10-13 07:06:11] 2025-10-13 11:05:16,433 | INFO     | . payload setup = 76 s
[2025-10-13 07:06:11] 2025-10-13 11:05:16,433 | INFO     | . stage-in = 1 s
[2025-10-13 07:06:11] 2025-10-13 11:05:16,433 | INFO     | . payload execution = 24564 s
[2025-10-13 07:06:11] 2025-10-13 11:05:16,433 | INFO     | . stage-out = 10 s
[2025-10-13 07:06:11] 2025-10-13 11:05:16,433 | INFO     | . log creation = 2 s
[2025-10-13 07:06:11] 2025-10-13 11:05:16,434 | INFO     | ..............................
[2025-10-13 07:06:11] 2025-10-13 11:05:16,869 | INFO     | time since job start (24783s) is within the limit (172800.0s)
[2025-10-13 07:06:11] 2025-10-13 11:05:17,840 | INFO     | 
[2025-10-13 07:06:11] 2025-10-13 11:05:17,840 | INFO     | job summary report
[2025-10-13 07:06:11] 2025-10-13 11:05:17,840 | INFO     | --------------------------------------------------
[2025-10-13 07:06:11] 2025-10-13 11:05:17,840 | INFO     | PanDA job id: 6840852388
[2025-10-13 07:06:11] 2025-10-13 11:05:17,840 | INFO     | task id: 46676269
[2025-10-13 07:06:11] 2025-10-13 11:05:17,840 | INFO     | errors: (none)
[2025-10-13 07:06:11] 2025-10-13 11:05:17,840 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:06:11] 2025-10-13 11:05:17,840 | INFO     | pilot state: finished 
[2025-10-13 07:06:11] 2025-10-13 11:05:17,840 | INFO     | transexitcode: 0
[2025-10-13 07:06:11] 2025-10-13 11:05:17,840 | INFO     | exeerrorcode: 0
[2025-10-13 07:06:11] 2025-10-13 11:05:17,840 | INFO     | exeerrordiag: 
[2025-10-13 07:06:11] 2025-10-13 11:05:17,841 | INFO     | exitcode: 0
[2025-10-13 07:06:11] 2025-10-13 11:05:17,841 | INFO     | exitmsg: OK
[2025-10-13 07:06:11] 2025-10-13 11:05:17,841 | INFO     | cpuconsumptiontime: 42729 s
[2025-10-13 07:06:11] 2025-10-13 11:05:17,841 | INFO     | nevents: 400
[2025-10-13 07:06:11] 2025-10-13 11:05:17,841 | INFO     | neventsw: 0
[2025-10-13 07:06:11] 2025-10-13 11:05:17,841 | INFO     | pid: 2925902
[2025-10-13 07:06:11] 2025-10-13 11:05:17,841 | INFO     | pgrp: 2925902
[2025-10-13 07:06:11] 2025-10-13 11:05:17,841 | INFO     | corecount: 9
[2025-10-13 07:06:11] 2025-10-13 11:05:17,841 | INFO     | event service: False
[2025-10-13 07:06:11] 2025-10-13 11:05:17,841 | INFO     | sizes: {0: 2348630, 1: 2348714, 2: 2348885, 3: 2348913, 15: 2348941, 28: 2348969, 40: 2349125, 49: 2349415, 52: 2349443, 24646: 2384238, 24659: 2393572, 24686: 239
[2025-10-13 07:06:11] 2025-10-13 11:05:17,841 | INFO     | --------------------------------------------------
[2025-10-13 07:06:11] 2025-10-13 11:05:17,841 | INFO     | 
[2025-10-13 07:06:11] 2025-10-13 11:05:17,842 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-13 07:06:11] 2025-10-13 11:05:18,130 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:06:11] 2025-10-13 11:05:18,131 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:06:11] 2025-10-13 11:05:18,131 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:06:11] 2025-10-13 11:05:18,131 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:06:11] 2025-10-13 11:05:18,131 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:06:11] 2025-10-13 11:05:18,132 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:06:11] 2025-10-13 11:05:18,132 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:06:11] 2025-10-13 11:05:18,132 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:06:11] 2025-10-13 11:05:18,132 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:06:11] 2025-10-13 11:05:18,132 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:06:11] 2025-10-13 11:05:18,132 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:06:11] 2025-10-13 11:05:18,132 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:06:11] 2025-10-13 11:05:18,133 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:06:11] 2025-10-13 11:05:18,133 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:06:11] 2025-10-13 11:05:18,133 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:06:11] 2025-10-13 11:05:18,133 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:06:11] 2025-10-13 11:05:18,133 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:06:11] 2025-10-13 11:05:18,133 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:06:11] 2025-10-13 11:05:18,133 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:06:11] 2025-10-13 11:05:18,133 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:06:11] 2025-10-13 11:05:18,189 | INFO     | job 6840852388 has completed (purged errors)
[2025-10-13 07:06:11] 2025-10-13 11:05:18,189 | INFO     | overall cleanup function is called
[2025-10-13 07:06:11] 2025-10-13 11:05:19,258 | INFO     | --- collectZombieJob: --- 10, [2925902]
[2025-10-13 07:06:11] 2025-10-13 11:05:19,258 | INFO     | zombie collector waiting for pid 2925902
[2025-10-13 07:06:11] 2025-10-13 11:05:19,258 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:06:11] 2025-10-13 11:05:19,258 | INFO     | collected zombie processes
[2025-10-13 07:06:11] 2025-10-13 11:05:19,258 | INFO     | will attempt to kill all subprocesses of pid=2925902
[2025-10-13 07:06:11] 2025-10-13 11:05:22,249 | INFO     | process IDs to be killed: [2925902] (in reverse order)
[2025-10-13 07:06:11] 2025-10-13 11:05:22,616 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:06:11] 2025-10-13 11:05:22,617 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:06:11] 2025-10-13 11:05:22,703 | INFO     | did not find any defunct processes belonging to 2925902
[2025-10-13 07:06:11] 2025-10-13 11:05:22,795 | INFO     | did not find any defunct processes belonging to 2925902
[2025-10-13 07:06:11] 2025-10-13 11:05:22,796 | INFO     | ready for new job
[2025-10-13 07:06:11] 2025-10-13 11:05:22,796 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:06:11] 2025-10-13 11:05:22,799 | INFO     | ***************************************
[2025-10-13 07:06:11] 2025-10-13 11:05:22,800 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:06:11] 2025-10-13 11:05:22,800 | INFO     | ***************************************
[2025-10-13 07:06:11] 2025-10-13 11:05:22,800 | INFO     | 
[2025-10-13 07:06:11] 2025-10-13 11:05:22,819 | INFO     | architecture information:
[2025-10-13 07:06:11] 2025-10-13 11:05:22,830 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:06:11] 2025-10-13 11:05:22,854 | INFO     | cat /etc/os-release:
[2025-10-13 07:06:11] NAME="CentOS Linux"
[2025-10-13 07:06:11] VERSION="7 (Core)"
[2025-10-13 07:06:11] ID="centos"
[2025-10-13 07:06:11] ID_LIKE="rhel fedora"
[2025-10-13 07:06:11] VERSION_ID="7"
[2025-10-13 07:06:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:06:11] ANSI_COLOR="0;31"
[2025-10-13 07:06:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:06:11] HOME_URL="https://www.centos.org/"
[2025-10-13 07:06:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:06:11] 
[2025-10-13 07:06:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:06:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:06:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:06:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:06:11] 
[2025-10-13 07:06:11] 2025-10-13 11:05:22,854 | INFO     | ***************************************
[2025-10-13 07:06:11] 2025-10-13 11:05:23,362 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-13 07:06:11] 2025-10-13 11:05:23,543 | INFO     | sufficient remaining disk space (55653171200 B)
[2025-10-13 07:06:11] 2025-10-13 11:05:23,544 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:06:11] 2025-10-13 11:05:23,544 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:06:11] 2025-10-13 11:05:23,544 | INFO     | update_server=False
[2025-10-13 07:06:11] 2025-10-13 11:05:23,544 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:06:11] 2025-10-13 11:05:23,545 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:06:11] 2025-10-13 11:05:23,545 | INFO     | aborting loop
[2025-10-13 07:06:11] 2025-10-13 11:05:23,560 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:06:11] 2025-10-13 11:05:23,952 | INFO     | all data control threads have been joined
[2025-10-13 07:06:11] 2025-10-13 11:05:24,146 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:06:11] 2025-10-13 11:05:24,256 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:06:11] 2025-10-13 11:05:24,550 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:06:11] 2025-10-13 11:05:24,556 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:06:11] 2025-10-13 11:05:24,566 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:06:11] 2025-10-13 11:05:24,582 | INFO     | all payload control threads have been joined
[2025-10-13 07:06:11] 2025-10-13 11:05:24,860 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:06:11] 2025-10-13 11:05:24,958 | INFO     | [data] control thread has finished
[2025-10-13 07:06:11] 2025-10-13 11:05:25,096 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:06:11] 2025-10-13 11:05:25,143 | INFO     | all job control threads have been joined
[2025-10-13 07:06:11] 2025-10-13 11:05:25,356 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:06:11] 2025-10-13 11:05:25,356 | INFO     | [job] validate thread has finished
[2025-10-13 07:06:11] 2025-10-13 11:05:25,363 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:06:11] 2025-10-13 11:05:25,592 | INFO     | [payload] control thread has finished
[2025-10-13 07:06:11] 2025-10-13 11:05:25,852 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:06:11] 2025-10-13 11:05:25,936 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:06:11] 2025-10-13 11:05:26,149 | INFO     | [job] control thread has finished
[2025-10-13 07:06:11] 2025-10-13 11:05:26,153 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:06:11] 2025-10-13 11:05:26,215 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:06:11] 2025-10-13 11:05:28,275 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:06:11] 2025-10-13 11:05:49,048 | INFO     | 24797s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-13 07:06:11] 2025-10-13 11:05:54,605 | INFO     | PID=2916358 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:06:11] 2025-10-13 11:05:54,606 | INFO     | .. there are 28 such processes running
[2025-10-13 07:06:11] 2025-10-13 11:05:54,606 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:06:11] 2025-10-13 11:05:54,606 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:06:11] 2025-10-13 11:05:54,606 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:06:11] 2025-10-13 11:06:01,858 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:06:11] 2025-10-13 11:06:03,905 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139874449155904)>', '<ExcThread(monitor, started 139874099246848)>']
[2025-10-13 07:06:11] 2025-10-13 11:06:04,691 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:06:11] 2025-10-13 11:06:04,691 | INFO     | [monitor] control thread has ended
[2025-10-13 07:06:11] 2025-10-13 11:06:08,933 | INFO     | all workflow threads have been joined
[2025-10-13 07:06:11] 2025-10-13 11:06:08,933 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:06:11] 2025-10-13 11:06:08,933 | INFO     | traces error code: 0
[2025-10-13 07:06:11] 2025-10-13 11:06:08,934 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:06:11] 2025-10-13 11:06:10,630 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:06:11] 2025-10-13 11:06:10,676 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:06:11] 2025-10-13 11:06:10,718 [wrapper] pilotpid: 2916358
[2025-10-13 07:06:11] 2025-10-13 11:06:10,771 [wrapper] Pilot exit status: 0
[2025-10-13 07:06:11] 2025-10-13 11:06:11,008 [wrapper] pandaids: 6840852388
[2025-10-13 07:06:11] 2025-10-13 11:06:11,568 [wrapper] cleanup supervisor_pilot   66589 2916359
[2025-10-13 07:06:11] 2025-10-13 11:06:11,574 [wrapper] Test setup, not cleaning
[2025-10-13 07:06:11] 2025-10-13 11:06:11,577 [wrapper] apfmon messages muted
[2025-10-13 07:06:11] 2025-10-13 11:06:11,580 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:06:11] 2025-10-13 11:06:11,583 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:06:11]  *** Error codes and diagnostics ***
[2025-10-13 07:06:11]     "exeErrorCode": 0,
[2025-10-13 07:06:11]     "exeErrorDiag": "",
[2025-10-13 07:06:11]     "pilotErrorCode": 0,
[2025-10-13 07:06:11]     "pilotErrorDiag": "",
[2025-10-13 07:06:11]  *** Listing of results directory ***
[2025-10-13 07:06:11] total 418812
[2025-10-13 07:06:11] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:57 pilot3.tar.gz
[2025-10-13 07:06:11] -rwx------. 1 boincer umatlas     36292 Oct 12 18:37 runpilot2-wrapper.sh
[2025-10-13 07:06:11] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 18:37 queuedata.json
[2025-10-13 07:06:11] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:06:11] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:10 run_atlas
[2025-10-13 07:06:11] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:10 job.xml
[2025-10-13 07:06:11] -rw-r--r--. 2 boincer umatlas 220486928 Oct 13 00:10 EVNT.46676267._004620.pool.root.1
[2025-10-13 07:06:11] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:10 start_atlas.sh
[2025-10-13 07:06:11] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:10 shared
[2025-10-13 07:06:11] -rw-r--r--. 2 boincer umatlas    569676 Oct 13 00:10 input.tar.gz
[2025-10-13 07:06:11] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:10 boinc_lockfile
[2025-10-13 07:06:11] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:10 pandaJob.out
[2025-10-13 07:06:11] -rw-------. 1 boincer umatlas    974373 Oct 13 00:12 agis_schedconf.cvmfs.json
[2025-10-13 07:06:11] drwx------. 5 boincer umatlas      4096 Oct 13 00:12 pilot3
[2025-10-13 07:06:11] -rw-------. 1 boincer umatlas 197899586 Oct 13 07:02 HITS.46676269._091217.pool.root.1
[2025-10-13 07:06:11] -rw-r--r--. 1 boincer umatlas       530 Oct 13 07:02 boinc_task_state.xml
[2025-10-13 07:06:11] -rw-r--r--. 1 boincer umatlas      6842 Oct 13 07:03 init_data.xml
[2025-10-13 07:06:11] -rw-------. 1 boincer umatlas      1054 Oct 13 07:04 memory_monitor_summary.json
[2025-10-13 07:06:11] -rw-------. 1 boincer umatlas   1560580 Oct 13 07:04 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:06:11] -rw-------. 1 boincer umatlas    583012 Oct 13 07:04 log.46676269._091217.job.log.tgz.1
[2025-10-13 07:06:11] -rw-------. 1 boincer umatlas        95 Oct 13 07:05 pilot_heartbeat.json
[2025-10-13 07:06:11] -rw-------. 1 boincer umatlas      7840 Oct 13 07:05 heartbeat.json
[2025-10-13 07:06:11] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 07:06 boinc_mmap_file
[2025-10-13 07:06:11] -rw-r--r--. 1 boincer umatlas        27 Oct 13 07:06 wrapper_checkpoint.txt
[2025-10-13 07:06:11] -rw-------. 1 boincer umatlas      4940 Oct 13 07:06 pilotlog.txt
[2025-10-13 07:06:11] -rw-------. 1 boincer umatlas   2704681 Oct 13 07:06 log.46676269._091217.job.log.1
[2025-10-13 07:06:11] -rw-------. 1 boincer umatlas       357 Oct 13 07:06 output.list
[2025-10-13 07:06:11] -rw-r--r--. 1 boincer umatlas       620 Oct 13 07:06 runtime_log
[2025-10-13 07:06:11] -rw-------. 1 boincer umatlas   3307520 Oct 13 07:06 result.tar.gz
[2025-10-13 07:06:11] -rw-r--r--. 1 boincer umatlas      8709 Oct 13 07:06 runtime_log.err
[2025-10-13 07:06:11] -rw-------. 1 boincer umatlas       657 Oct 13 07:06 5j4NDmprJS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmwBVMDml13VSo.diag
[2025-10-13 07:06:11] -rw-r--r--. 1 boincer umatlas     21252 Oct 13 07:06 stderr.txt
[2025-10-13 07:06:12] HITS file was successfully produced:
[2025-10-13 07:06:12] -rw-------. 1 boincer umatlas 197899586 Oct 13 07:02 shared/HITS.pool.root.1
[2025-10-13 07:06:12]  *** Contents of shared directory: ***
[2025-10-13 07:06:12] total 412396
[2025-10-13 07:06:12] -rw-r--r--. 2 boincer umatlas 220486928 Oct 13 00:10 ATLAS.root_0
[2025-10-13 07:06:12] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:10 start_atlas.sh
[2025-10-13 07:06:12] -rw-r--r--. 2 boincer umatlas    569676 Oct 13 00:10 input.tar.gz
[2025-10-13 07:06:12] -rw-------. 1 boincer umatlas 197899586 Oct 13 07:02 HITS.pool.root.1
[2025-10-13 07:06:12] -rw-------. 1 boincer umatlas   3307520 Oct 13 07:06 result.tar.gz
07:06:13 (2908170): run_atlas exited; CPU time 43551.728135
07:06:13 (2908170): called boinc_finish(0)

</stderr_txt>
]]>

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