Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:18 (1476424): wrapper (7.7.26015): starting
00:02:18 (1476424): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:02:18] Arguments: --nthreads 12
[2025-10-13 00:02:18] Threads: 12
[2025-10-13 00:02:18] Checking for CVMFS
[2025-10-13 00:02:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:02:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:02:19] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:02:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:02:21] 2.13.2.0 125410 125975 408880 151647 1 196 16501837 32935936 36402 16776704 0 261383348 99.644 242098110 20886 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:02:21] CVMFS is ok
[2025-10-13 00:02:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:02:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:02:21] Further information can be found at the LHC@home message board.
[2025-10-13 00:02:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:02:21] Checking for apptainer binary...
[2025-10-13 00:02:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:02:21] Running /usr/bin/apptainer --version
[2025-10-13 00:02:21] apptainer version 1.4.3-1.el9
[2025-10-13 00:02:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:02:22] c6-12-27-1.aglt2.org
[2025-10-13 00:02:22] apptainer works
[2025-10-13 00:02:22] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:02:22] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:02:22] Starting ATLAS job with PandaID=6840750372
[2025-10-13 00:02:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:12:56]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:12:56] 2025-10-13 11:05:01,943 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:12:56] 2025-10-13 11:05:01,961 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:12:56] 2025-10-13 11:05:01,967 | INFO     | sum of square deviations: 21527325812.355156
[2025-10-13 07:12:56] 2025-10-13 11:05:01,979 | INFO     | sum of deviations: 146502062627.57687
[2025-10-13 07:12:56] 2025-10-13 11:05:01,980 | INFO     | mean x: 1760340899.3965936
[2025-10-13 07:12:56] 2025-10-13 11:05:01,980 | INFO     | mean y: 2403932.5547445253
[2025-10-13 07:12:56] 2025-10-13 11:05:01,980 | INFO     | -- intersect: -11977419986.92494
[2025-10-13 07:12:56] 2025-10-13 11:05:01,980 | INFO     | intersect: -11977419986.92494
[2025-10-13 07:12:56] 2025-10-13 11:05:01,981 | INFO     | chi2: 6.500979424677195
[2025-10-13 07:12:56] 2025-10-13 11:05:01,982 | INFO     | sum of square deviations: 20751178006.85953
[2025-10-13 07:12:56] 2025-10-13 11:05:01,996 | INFO     | sum of deviations: 225788037690.1503
[2025-10-13 07:12:56] 2025-10-13 11:05:01,997 | INFO     | mean x: 1760340746.8990147
[2025-10-13 07:12:56] 2025-10-13 11:05:01,997 | INFO     | mean y: 2419439.1256157635
[2025-10-13 07:12:56] 2025-10-13 11:05:01,997 | INFO     | -- intersect: -19151379095.924107
[2025-10-13 07:12:56] 2025-10-13 11:05:01,997 | INFO     | intersect: -19151379095.924107
[2025-10-13 07:12:56] 2025-10-13 11:05:01,998 | INFO     | chi2: 4.195013232906959
[2025-10-13 07:12:56] 2025-10-13 11:05:01,998 | INFO     | current chi2=4.195013232906959 (change=35.47105814574606 %)
[2025-10-13 07:12:56] 2025-10-13 11:05:01,998 | INFO     | sum of square deviations: 19993889632.159576
[2025-10-13 07:12:56] 2025-10-13 11:05:02,004 | INFO     | sum of deviations: 225665095880.5463
[2025-10-13 07:12:56] 2025-10-13 11:05:02,005 | INFO     | mean x: 1760340594.3990026
[2025-10-13 07:12:56] 2025-10-13 11:05:02,005 | INFO     | mean y: 2419412.8653366584
[2025-10-13 07:12:56] 2025-10-13 11:05:02,005 | INFO     | -- intersect: -19866022212.3454
[2025-10-13 07:12:56] 2025-10-13 11:05:02,005 | INFO     | intersect: -19866022212.3454
[2025-10-13 07:12:56] 2025-10-13 11:05:02,006 | INFO     | chi2: 4.18984531681515
[2025-10-13 07:12:56] 2025-10-13 11:05:02,010 | INFO     | current chi2=4.18984531681515 (change=0.12319189010585407 %)
[2025-10-13 07:12:56] 2025-10-13 11:05:02,010 | INFO     | right removable region: 400
[2025-10-13 07:12:56] 2025-10-13 11:05:02,011 | INFO     | sum of square deviations: 20751153667.655186
[2025-10-13 07:12:56] 2025-10-13 11:05:02,021 | INFO     | sum of deviations: 29064611316.517273
[2025-10-13 07:12:56] 2025-10-13 11:05:02,021 | INFO     | mean x: 1760341051.8965516
[2025-10-13 07:12:56] 2025-10-13 11:05:02,021 | INFO     | mean y: 2426979.798029557
[2025-10-13 07:12:56] 2025-10-13 11:05:02,022 | INFO     | -- intersect: -2463152971.9147835
[2025-10-13 07:12:56] 2025-10-13 11:05:02,022 | INFO     | intersect: -2463152971.9147835
[2025-10-13 07:12:56] 2025-10-13 11:05:02,022 | INFO     | chi2: 3.3101040639114307
[2025-10-13 07:12:56] 2025-10-13 11:05:02,022 | INFO     | current chi2=3.3101040639114307 (change=49.08299430472673 %)
[2025-10-13 07:12:56] 2025-10-13 11:05:02,023 | INFO     | sum of square deviations: 19993815944.35916
[2025-10-13 07:12:56] 2025-10-13 11:05:02,031 | INFO     | sum of deviations: -26789907329.3666
[2025-10-13 07:12:56] 2025-10-13 11:05:02,031 | INFO     | mean x: 1760341204.4014962
[2025-10-13 07:12:56] 2025-10-13 11:05:02,032 | INFO     | mean y: 2438222.6109725684
[2025-10-13 07:12:56] 2025-10-13 11:05:02,032 | INFO     | -- intersect: 2361136425.356342
[2025-10-13 07:12:56] 2025-10-13 11:05:02,032 | INFO     | intersect: 2361136425.356342
[2025-10-13 07:12:56] 2025-10-13 11:05:02,037 | INFO     | chi2: 2.6297230994761507
[2025-10-13 07:12:56] 2025-10-13 11:05:02,037 | INFO     | current chi2=2.6297230994761507 (change=20.55466992271229 %)
[2025-10-13 07:12:56] 2025-10-13 11:05:02,037 | INFO     | left removable region: 20
[2025-10-13 07:12:56] 2025-10-13 11:05:02,038 | INFO     | sum of square deviations: 17014132103.776258
[2025-10-13 07:12:56] 2025-10-13 11:05:02,046 | INFO     | sum of deviations: 18744436102.684208
[2025-10-13 07:12:56] 2025-10-13 11:05:02,046 | INFO     | mean x: 1760341173.9078948
[2025-10-13 07:12:56] 2025-10-13 11:05:02,046 | INFO     | mean y: 2462762.905263158
[2025-10-13 07:12:56] 2025-10-13 11:05:02,046 | INFO     | -- intersect: -1936901669.6723528
[2025-10-13 07:12:56] 2025-10-13 11:05:02,046 | INFO     | intersect: -1936901669.6723528
[2025-10-13 07:12:56] 2025-10-13 11:05:02,047 | INFO     | chi2: 0.024280481382089353
[2025-10-13 07:12:56] 2025-10-13 11:05:02,047 | INFO     | -- intersect: -1936901669.6723528
[2025-10-13 07:12:56] 2025-10-13 11:05:02,047 | INFO     | current memory leak: 1.10 B/s (using 380 data points, chi2=0.02)
[2025-10-13 07:12:56] 2025-10-13 11:05:02,053 | INFO     | could have reported an average CPU frequency of 2584 MHz (17 samples)
[2025-10-13 07:12:56] 2025-10-13 11:05:02,054 | INFO     | ..............................
[2025-10-13 07:12:56] 2025-10-13 11:05:02,054 | INFO     | . Timing measurements:
[2025-10-13 07:12:56] 2025-10-13 11:05:02,054 | INFO     | . get job = 0 s
[2025-10-13 07:12:56] 2025-10-13 11:05:02,054 | INFO     | . initial setup = 7 s
[2025-10-13 07:12:56] 2025-10-13 11:05:02,054 | INFO     | . payload setup = 47 s
[2025-10-13 07:12:56] 2025-10-13 11:05:02,054 | INFO     | . stage-in = 0 s
[2025-10-13 07:12:56] 2025-10-13 11:05:02,054 | INFO     | . payload execution = 25092 s
[2025-10-13 07:12:56] 2025-10-13 11:05:02,054 | INFO     | . stage-out = 7 s
[2025-10-13 07:12:56] 2025-10-13 11:05:02,054 | INFO     | . log creation = 1 s
[2025-10-13 07:12:56] 2025-10-13 11:05:02,054 | INFO     | ..............................
[2025-10-13 07:12:56] 2025-10-13 11:05:02,366 | INFO     | 
[2025-10-13 07:12:56] 2025-10-13 11:05:02,366 | INFO     | job summary report
[2025-10-13 07:12:56] 2025-10-13 11:05:02,366 | INFO     | --------------------------------------------------
[2025-10-13 07:12:56] 2025-10-13 11:05:02,366 | INFO     | PanDA job id: 6840750372
[2025-10-13 07:12:56] 2025-10-13 11:05:02,366 | INFO     | task id: 46676269
[2025-10-13 07:12:56] 2025-10-13 11:05:02,367 | INFO     | errors: (none)
[2025-10-13 07:12:56] 2025-10-13 11:05:02,367 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:12:56] 2025-10-13 11:05:02,367 | INFO     | pilot state: finished 
[2025-10-13 07:12:56] 2025-10-13 11:05:02,367 | INFO     | transexitcode: 0
[2025-10-13 07:12:56] 2025-10-13 11:05:02,367 | INFO     | exeerrorcode: 0
[2025-10-13 07:12:56] 2025-10-13 11:05:02,367 | INFO     | exeerrordiag: 
[2025-10-13 07:12:56] 2025-10-13 11:05:02,367 | INFO     | exitcode: 0
[2025-10-13 07:12:56] 2025-10-13 11:05:02,367 | INFO     | exitmsg: OK
[2025-10-13 07:12:56] 2025-10-13 11:05:02,367 | INFO     | cpuconsumptiontime: 47968 s
[2025-10-13 07:12:56] 2025-10-13 11:05:02,367 | INFO     | nevents: 400
[2025-10-13 07:12:56] 2025-10-13 11:05:02,367 | INFO     | neventsw: 0
[2025-10-13 07:12:56] 2025-10-13 11:05:02,368 | INFO     | pid: 1519830
[2025-10-13 07:12:56] 2025-10-13 11:05:02,368 | INFO     | pgrp: 1519830
[2025-10-13 07:12:56] 2025-10-13 11:05:02,368 | INFO     | corecount: 12
[2025-10-13 07:12:56] 2025-10-13 11:05:02,368 | INFO     | event service: False
[2025-10-13 07:12:56] 2025-10-13 11:05:02,368 | INFO     | sizes: {0: 2348029, 1: 2348714, 2: 2348913, 3: 2348913, 14: 2348941, 25: 2348969, 36: 2349125, 41: 2349415, 48: 2349443, 25143: 2384524, 25144: 2384523, 25152: 239
[2025-10-13 07:12:56] 2025-10-13 11:05:02,368 | INFO     | --------------------------------------------------
[2025-10-13 07:12:56] 2025-10-13 11:05:02,368 | INFO     | 
[2025-10-13 07:12:56] 2025-10-13 11:05:02,368 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-10-13 07:12:56] 2025-10-13 11:05:02,416 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:12:56] 2025-10-13 11:05:02,417 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:12:56] 2025-10-13 11:05:02,417 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:12:56] 2025-10-13 11:05:02,417 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:12:56] 2025-10-13 11:05:02,417 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:12:56] 2025-10-13 11:05:02,417 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:12:56] 2025-10-13 11:05:02,417 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:12:56] 2025-10-13 11:05:02,417 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:12:56] 2025-10-13 11:05:02,418 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:12:56] 2025-10-13 11:05:02,418 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:12:56] 2025-10-13 11:05:02,418 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:12:56] 2025-10-13 11:05:02,418 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:12:56] 2025-10-13 11:05:02,418 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:12:56] 2025-10-13 11:05:02,418 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:12:56] 2025-10-13 11:05:02,418 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:12:56] 2025-10-13 11:05:02,418 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:12:56] 2025-10-13 11:05:02,418 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:12:56] 2025-10-13 11:05:02,418 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:12:56] 2025-10-13 11:05:02,418 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:12:56] 2025-10-13 11:05:02,418 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:12:56] 2025-10-13 11:05:02,418 | INFO     | job 6840750372 has completed (purged errors)
[2025-10-13 07:12:56] 2025-10-13 11:05:02,419 | INFO     | overall cleanup function is called
[2025-10-13 07:12:56] 2025-10-13 11:05:03,430 | INFO     | --- collectZombieJob: --- 10, [1519830]
[2025-10-13 07:12:56] 2025-10-13 11:05:03,431 | INFO     | zombie collector waiting for pid 1519830
[2025-10-13 07:12:56] 2025-10-13 11:05:03,431 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:12:56] 2025-10-13 11:05:03,431 | INFO     | collected zombie processes
[2025-10-13 07:12:56] 2025-10-13 11:05:03,431 | INFO     | will attempt to kill all subprocesses of pid=1519830
[2025-10-13 07:12:56] 2025-10-13 11:05:06,413 | INFO     | process IDs to be killed: [1519830] (in reverse order)
[2025-10-13 07:12:56] 2025-10-13 11:05:06,777 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:12:56] 2025-10-13 11:05:06,778 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:12:56] 2025-10-13 11:05:06,839 | INFO     | did not find any defunct processes belonging to 1519830
[2025-10-13 07:12:56] 2025-10-13 11:05:06,920 | INFO     | did not find any defunct processes belonging to 1519830
[2025-10-13 07:12:56] 2025-10-13 11:05:06,920 | INFO     | ready for new job
[2025-10-13 07:12:56] 2025-10-13 11:05:06,920 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:12:56] 2025-10-13 11:05:06,934 | INFO     | ***************************************
[2025-10-13 07:12:56] 2025-10-13 11:05:06,934 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:12:56] 2025-10-13 11:05:06,934 | INFO     | ***************************************
[2025-10-13 07:12:56] 2025-10-13 11:05:06,934 | INFO     | 
[2025-10-13 07:12:56] 2025-10-13 11:05:06,963 | INFO     | architecture information:
[2025-10-13 07:12:56] 2025-10-13 11:05:06,971 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:12:56] 2025-10-13 11:05:07,092 | INFO     | cat /etc/os-release:
[2025-10-13 07:12:56] NAME="CentOS Linux"
[2025-10-13 07:12:56] VERSION="7 (Core)"
[2025-10-13 07:12:56] ID="centos"
[2025-10-13 07:12:56] ID_LIKE="rhel fedora"
[2025-10-13 07:12:56] VERSION_ID="7"
[2025-10-13 07:12:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:12:56] ANSI_COLOR="0;31"
[2025-10-13 07:12:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:12:56] HOME_URL="https://www.centos.org/"
[2025-10-13 07:12:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:12:56] 
[2025-10-13 07:12:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:12:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:12:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:12:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:12:56] 
[2025-10-13 07:12:56] 2025-10-13 11:05:07,092 | INFO     | ***************************************
[2025-10-13 07:12:56] 2025-10-13 11:05:07,595 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-10-13 07:12:56] 2025-10-13 11:05:07,674 | INFO     | sufficient remaining disk space (93357867008 B)
[2025-10-13 07:12:56] 2025-10-13 11:05:07,674 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:12:56] 2025-10-13 11:05:07,674 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:12:56] 2025-10-13 11:05:07,674 | INFO     | update_server=False
[2025-10-13 07:12:56] 2025-10-13 11:05:07,675 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:12:56] 2025-10-13 11:05:07,675 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:12:56] 2025-10-13 11:05:07,675 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:12:56] 2025-10-13 11:05:07,998 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 07:12:56] 2025-10-13 11:05:07,999 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 07:12:56] 2025-10-13 11:05:08,002 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:12:56] 2025-10-13 11:05:08,003 | INFO     | will abort loop
[2025-10-13 07:12:56] 2025-10-13 11:05:08,198 | INFO     | all data control threads have been joined
[2025-10-13 07:12:56] 2025-10-13 11:05:08,224 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:12:56] 2025-10-13 11:05:08,252 | INFO     | all job control threads have been joined
[2025-10-13 07:12:56] 2025-10-13 11:05:08,683 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:12:56] 2025-10-13 11:05:08,684 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:12:56] 2025-10-13 11:05:08,735 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:12:56] 2025-10-13 11:05:08,995 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:12:56] 2025-10-13 11:05:09,007 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:12:56] 2025-10-13 11:05:09,059 | INFO     | all payload control threads have been joined
[2025-10-13 07:12:56] 2025-10-13 11:05:09,204 | INFO     | [data] control thread has finished
[2025-10-13 07:12:56] 2025-10-13 11:05:09,258 | INFO     | [job] control thread has finished
[2025-10-13 07:12:56] 2025-10-13 11:05:09,506 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:12:56] 2025-10-13 11:05:09,659 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:12:56] 2025-10-13 11:05:09,682 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:12:56] 2025-10-13 11:05:09,739 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:12:56] 2025-10-13 11:05:09,740 | INFO     | [job] validate thread has finished
[2025-10-13 07:12:56] 2025-10-13 11:05:10,065 | INFO     | [payload] control thread has finished
[2025-10-13 07:12:56] 2025-10-13 11:05:10,144 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:12:56] 2025-10-13 11:05:10,256 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:12:56] 2025-10-13 11:05:12,233 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:12:56] 2025-10-13 11:05:36,108 | INFO     | PID=1488844 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:12:56] 2025-10-13 11:05:36,108 | INFO     | .. there are 42 such processes running
[2025-10-13 07:12:56] 2025-10-13 11:05:36,109 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:12:56] 2025-10-13 11:05:36,110 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:12:56] 2025-10-13 11:05:36,110 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:12:56] 2025-10-13 11:05:38,333 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:12:56] 2025-10-13 11:05:39,492 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139629294425920)>', '<ExcThread(monitor, started 139628438873856)>']
[2025-10-13 07:12:56] 2025-10-13 11:05:40,145 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:12:56] 2025-10-13 11:05:40,145 | INFO     | [monitor] control thread has ended
[2025-10-13 07:12:56] 2025-10-13 11:05:44,518 | INFO     | all workflow threads have been joined
[2025-10-13 07:12:56] 2025-10-13 11:05:44,519 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:12:56] 2025-10-13 11:05:44,519 | INFO     | traces error code: 0
[2025-10-13 07:12:56] 2025-10-13 11:05:44,519 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:12:56] 2025-10-13 11:05:45,127 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:12:56] 2025-10-13 11:05:45,168 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:12:56] 2025-10-13 11:05:45,246 [wrapper] pilotpid: 1488844
[2025-10-13 07:12:56] 2025-10-13 11:05:45,286 [wrapper] Pilot exit status: 0
[2025-10-13 07:12:56] 2025-10-13 11:05:45,476 [wrapper] pandaids: 6840750372
[2025-10-13 07:12:56] 2025-10-13 11:05:46,421 [wrapper] cleanup supervisor_pilot 3032101 1488845
[2025-10-13 07:12:56] 2025-10-13 11:05:46,443 [wrapper] Test setup, not cleaning
[2025-10-13 07:12:56] 2025-10-13 11:05:46,493 [wrapper] apfmon messages muted
[2025-10-13 07:12:56] 2025-10-13 11:05:46,516 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:12:56] 2025-10-13 11:05:46,594 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:12:56]  *** Error codes and diagnostics ***
[2025-10-13 07:12:56]     "exeErrorCode": 0,
[2025-10-13 07:12:56]     "exeErrorDiag": "",
[2025-10-13 07:12:56]     "pilotErrorCode": 0,
[2025-10-13 07:12:56]     "pilotErrorDiag": "",
[2025-10-13 07:12:56]  *** Listing of results directory ***
[2025-10-13 07:12:56] total 417564
[2025-10-13 07:12:56] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:12 pilot3.tar.gz
[2025-10-13 07:12:56] -rwx------. 1 boincer umatlas     36292 Oct 12 17:17 runpilot2-wrapper.sh
[2025-10-13 07:12:56] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 17:17 queuedata.json
[2025-10-13 07:12:56] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:12:56] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:02 run_atlas
[2025-10-13 07:12:56] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:02 job.xml
[2025-10-13 07:12:56] -rw-r--r--. 2 boincer umatlas 220418489 Oct 13 00:02 EVNT.46676267._004779.pool.root.1
[2025-10-13 07:12:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:02 start_atlas.sh
[2025-10-13 07:12:56] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:02 shared
[2025-10-13 07:12:56] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 00:02 input.tar.gz
[2025-10-13 07:12:56] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:02 boinc_lockfile
[2025-10-13 07:12:56] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:02 pandaJob.out
[2025-10-13 07:12:56] -rw-------. 1 boincer umatlas    974373 Oct 13 00:03 agis_schedconf.cvmfs.json
[2025-10-13 07:12:56] drwx------. 5 boincer umatlas      4096 Oct 13 00:03 pilot3
[2025-10-13 07:12:56] -rw-------. 1 boincer umatlas 196026831 Oct 13 07:01 HITS.46676269._089744.pool.root.1
[2025-10-13 07:12:56] -rw-r--r--. 1 boincer umatlas       530 Oct 13 07:01 boinc_task_state.xml
[2025-10-13 07:12:56] -rw-------. 1 boincer umatlas      1056 Oct 13 07:04 memory_monitor_summary.json
[2025-10-13 07:12:56] -rw-------. 1 boincer umatlas   1560580 Oct 13 07:04 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:12:56] -rw-------. 1 boincer umatlas    660622 Oct 13 07:04 log.46676269._089744.job.log.tgz.1
[2025-10-13 07:12:56] -rw-------. 1 boincer umatlas      7855 Oct 13 07:05 heartbeat.json
[2025-10-13 07:12:56] -rw-------. 1 boincer umatlas        95 Oct 13 07:05 pilot_heartbeat.json
[2025-10-13 07:12:56] -rw-------. 1 boincer umatlas      5010 Oct 13 07:05 pilotlog.txt
[2025-10-13 07:12:56] -rw-------. 1 boincer umatlas   2960258 Oct 13 07:05 log.46676269._089744.job.log.1
[2025-10-13 07:12:56] -rw-------. 1 boincer umatlas       357 Oct 13 07:05 output.list
[2025-10-13 07:12:56] -rw-r--r--. 1 boincer umatlas       620 Oct 13 07:05 runtime_log
[2025-10-13 07:12:56] -rw-------. 1 boincer umatlas   3635200 Oct 13 07:05 result.tar.gz
[2025-10-13 07:12:56] -rw-r--r--. 1 boincer umatlas      8716 Oct 13 07:05 runtime_log.err
[2025-10-13 07:12:56] -rw-------. 1 boincer umatlas       663 Oct 13 07:05 46kNDmjcIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmdblNDm8sR0bn.diag
[2025-10-13 07:12:56] -rw-r--r--. 1 boincer umatlas      6860 Oct 13 07:09 init_data.xml
[2025-10-13 07:12:56] -rw-r--r--. 1 boincer umatlas        27 Oct 13 07:12 wrapper_checkpoint.txt
[2025-10-13 07:12:56] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 07:12 boinc_mmap_file
[2025-10-13 07:12:56] -rw-r--r--. 1 boincer umatlas     21071 Oct 13 07:12 stderr.txt
[2025-10-13 07:12:56] HITS file was successfully produced:
[2025-10-13 07:12:56] -rw-------. 1 boincer umatlas 196026831 Oct 13 07:01 shared/HITS.pool.root.1
[2025-10-13 07:12:56]  *** Contents of shared directory: ***
[2025-10-13 07:12:56] total 410824
[2025-10-13 07:12:56] -rw-r--r--. 2 boincer umatlas 220418489 Oct 13 00:02 ATLAS.root_0
[2025-10-13 07:12:56] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:02 start_atlas.sh
[2025-10-13 07:12:56] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 00:02 input.tar.gz
[2025-10-13 07:12:56] -rw-------. 1 boincer umatlas 196026831 Oct 13 07:01 HITS.pool.root.1
[2025-10-13 07:12:56] -rw-------. 1 boincer umatlas   3635200 Oct 13 07:05 result.tar.gz
07:13:18 (1476424): run_atlas exited; CPU time 49355.457887
07:13:18 (1476424): called boinc_finish(0)

</stderr_txt>
]]>

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