Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:24 (3461058): wrapper (7.7.26015): starting
00:03:24 (3461058): wrapper: running run_atlas (--nthreads 10)
[2025-10-13 00:03:24] Arguments: --nthreads 10
[2025-10-13 00:03:24] Threads: 10
[2025-10-13 00:03:24] Checking for CVMFS
[2025-10-13 00:03:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:03:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:03:25] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:03:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:03:26] 2.13.2.0 870721 130196 850888 151647 2 605 32666403 32935937 48733 16776704 0 391784923 99.724 270358935 18251 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:03:26] CVMFS is ok
[2025-10-13 00:03:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:03:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:03:26] Further information can be found at the LHC@home message board.
[2025-10-13 00:03:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:03:26] Checking for apptainer binary...
[2025-10-13 00:03:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:03:26] Running /usr/bin/apptainer --version
[2025-10-13 00:03:26] apptainer version 1.4.3-1.el9
[2025-10-13 00:03:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:03:27] lc-10-11.aglt2.org
[2025-10-13 00:03:27] apptainer works
[2025-10-13 00:03:27] Set ATHENA_PROC_NUMBER=10
[2025-10-13 00:03:27] Set ATHENA_CORE_NUMBER=10
[2025-10-13 00:03:27] Starting ATLAS job with PandaID=6840961514
[2025-10-13 00:03:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:43:34]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:43:34] 2025-10-13 09:42:28,244 | INFO     | sum of deviations: 146290735471.8335
[2025-10-13 05:43:34] 2025-10-13 09:42:28,244 | INFO     | mean x: 1760338298.9166667
[2025-10-13 05:43:34] 2025-10-13 09:42:28,244 | INFO     | mean y: 2135731.9567901236
[2025-10-13 05:43:34] 2025-10-13 09:42:28,245 | INFO     | -- intersect: -24415973831.69833
[2025-10-13 05:43:34] 2025-10-13 09:42:28,249 | INFO     | intersect: -24415973831.69833
[2025-10-13 05:43:34] 2025-10-13 09:42:28,249 | INFO     | chi2: 3.685147700843599
[2025-10-13 05:43:34] 2025-10-13 09:42:28,250 | INFO     | current chi2=3.685147700843599 (change=0.03970554663344816 %)
[2025-10-13 05:43:34] 2025-10-13 09:42:28,250 | INFO     | right removable region: 323
[2025-10-13 05:43:34] 2025-10-13 09:42:28,250 | INFO     | sum of square deviations: 10546256949.580265
[2025-10-13 05:43:34] 2025-10-13 09:42:28,253 | INFO     | sum of deviations: 73943748673.1482
[2025-10-13 05:43:34] 2025-10-13 09:42:28,253 | INFO     | mean x: 1760338603.9135802
[2025-10-13 05:43:34] 2025-10-13 09:42:28,253 | INFO     | mean y: 2160166.1481481483
[2025-10-13 05:43:34] 2025-10-13 09:42:28,253 | INFO     | -- intersect: -12340231635.011871
[2025-10-13 05:43:34] 2025-10-13 09:42:28,254 | INFO     | intersect: -12340231635.011871
[2025-10-13 05:43:34] 2025-10-13 09:42:28,254 | INFO     | chi2: 0.9018560827134307
[2025-10-13 05:43:34] 2025-10-13 09:42:28,254 | INFO     | current chi2=0.9018560827134307 (change=75.5369914855903 %)
[2025-10-13 05:43:34] 2025-10-13 09:42:28,255 | INFO     | sum of square deviations: 10065444273.711632
[2025-10-13 05:43:34] 2025-10-13 09:42:28,261 | INFO     | sum of deviations: 37439474176.266495
[2025-10-13 05:43:34] 2025-10-13 09:42:28,262 | INFO     | mean x: 1760338756.4200628
[2025-10-13 05:43:34] 2025-10-13 09:42:28,262 | INFO     | mean y: 2171727.6771159875
[2025-10-13 05:43:34] 2025-10-13 09:42:28,262 | INFO     | -- intersect: -6545592645.188178
[2025-10-13 05:43:34] 2025-10-13 09:42:28,262 | INFO     | intersect: -6545592645.188178
[2025-10-13 05:43:34] 2025-10-13 09:42:28,263 | INFO     | chi2: 0.30697558938282077
[2025-10-13 05:43:34] 2025-10-13 09:42:28,263 | INFO     | current chi2=0.30697558938282077 (change=65.96179864316957 %)
[2025-10-13 05:43:34] 2025-10-13 09:42:28,263 | INFO     | sum of square deviations: 9599488300.165653
[2025-10-13 05:43:34] 2025-10-13 09:42:28,271 | INFO     | sum of deviations: 20331048041.949043
[2025-10-13 05:43:34] 2025-10-13 09:42:28,271 | INFO     | mean x: 1760338908.9235668
[2025-10-13 05:43:34] 2025-10-13 09:42:28,271 | INFO     | mean y: 2177310.331210191
[2025-10-13 05:43:34] 2025-10-13 09:42:28,272 | INFO     | -- intersect: -3726097969.385481
[2025-10-13 05:43:34] 2025-10-13 09:42:28,272 | INFO     | intersect: -3726097969.385481
[2025-10-13 05:43:34] 2025-10-13 09:42:28,272 | INFO     | chi2: 0.16067300565578355
[2025-10-13 05:43:34] 2025-10-13 09:42:28,272 | INFO     | current chi2=0.16067300565578355 (change=47.65935428975993 %)
[2025-10-13 05:43:34] 2025-10-13 09:42:28,279 | INFO     | sum of square deviations: 9148137373.611618
[2025-10-13 05:43:34] 2025-10-13 09:42:28,282 | INFO     | sum of deviations: 17762513251.52427
[2025-10-13 05:43:34] 2025-10-13 09:42:28,282 | INFO     | mean x: 1760339061.4271846
[2025-10-13 05:43:34] 2025-10-13 09:42:28,282 | INFO     | mean y: 2178175.556634304
[2025-10-13 05:43:34] 2025-10-13 09:42:28,282 | INFO     | -- intersect: -3415790382.2801576
[2025-10-13 05:43:34] 2025-10-13 09:42:28,282 | INFO     | intersect: -3415790382.2801576
[2025-10-13 05:43:34] 2025-10-13 09:42:28,287 | INFO     | chi2: 0.15760856622099187
[2025-10-13 05:43:34] 2025-10-13 09:42:28,287 | INFO     | current chi2=0.15760856622099187 (change=1.9072521997607692 %)
[2025-10-13 05:43:34] 2025-10-13 09:42:28,287 | INFO     | left removable region: 40
[2025-10-13 05:43:34] 2025-10-13 09:42:28,288 | INFO     | sum of square deviations: 7027674393.787969
[2025-10-13 05:43:34] 2025-10-13 09:42:28,290 | INFO     | sum of deviations: 15594930143.936398
[2025-10-13 05:43:34] 2025-10-13 09:42:28,290 | INFO     | mean x: 1760339488.4416962
[2025-10-13 05:43:34] 2025-10-13 09:42:28,290 | INFO     | mean y: 2178628.632508834
[2025-10-13 05:43:34] 2025-10-13 09:42:28,291 | INFO     | -- intersect: -3904145115.695656
[2025-10-13 05:43:34] 2025-10-13 09:42:28,291 | INFO     | intersect: -3904145115.695656
[2025-10-13 05:43:34] 2025-10-13 09:42:28,291 | INFO     | chi2: 0.1445266772600652
[2025-10-13 05:43:34] 2025-10-13 09:42:28,291 | INFO     | -- intersect: -3904145115.695656
[2025-10-13 05:43:34] 2025-10-13 09:42:28,291 | INFO     | current memory leak: 2.22 B/s (using 283 data points, chi2=0.14)
[2025-10-13 05:43:34] 2025-10-13 09:42:28,292 | INFO     | could have reported an average CPU frequency of 2640 MHz (14 samples)
[2025-10-13 05:43:34] 2025-10-13 09:42:28,292 | INFO     | ..............................
[2025-10-13 05:43:34] 2025-10-13 09:42:28,292 | INFO     | . Timing measurements:
[2025-10-13 05:43:34] 2025-10-13 09:42:28,292 | INFO     | . get job = 0 s
[2025-10-13 05:43:34] 2025-10-13 09:42:28,293 | INFO     | . initial setup = 7 s
[2025-10-13 05:43:34] 2025-10-13 09:42:28,297 | INFO     | . payload setup = 44 s
[2025-10-13 05:43:34] 2025-10-13 09:42:28,297 | INFO     | . stage-in = 0 s
[2025-10-13 05:43:34] 2025-10-13 09:42:28,297 | INFO     | . payload execution = 20096 s
[2025-10-13 05:43:34] 2025-10-13 09:42:28,297 | INFO     | . stage-out = 4 s
[2025-10-13 05:43:34] 2025-10-13 09:42:28,297 | INFO     | . log creation = 0 s
[2025-10-13 05:43:34] 2025-10-13 09:42:28,297 | INFO     | ..............................
[2025-10-13 05:43:34] 2025-10-13 09:42:28,500 | INFO     | 
[2025-10-13 05:43:34] 2025-10-13 09:42:28,500 | INFO     | job summary report
[2025-10-13 05:43:34] 2025-10-13 09:42:28,500 | INFO     | --------------------------------------------------
[2025-10-13 05:43:34] 2025-10-13 09:42:28,500 | INFO     | PanDA job id: 6840961514
[2025-10-13 05:43:34] 2025-10-13 09:42:28,500 | INFO     | task id: 46676269
[2025-10-13 05:43:34] 2025-10-13 09:42:28,500 | INFO     | errors: (none)
[2025-10-13 05:43:34] 2025-10-13 09:42:28,500 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:43:34] 2025-10-13 09:42:28,500 | INFO     | pilot state: finished 
[2025-10-13 05:43:34] 2025-10-13 09:42:28,501 | INFO     | transexitcode: 0
[2025-10-13 05:43:34] 2025-10-13 09:42:28,501 | INFO     | exeerrorcode: 0
[2025-10-13 05:43:34] 2025-10-13 09:42:28,501 | INFO     | exeerrordiag: 
[2025-10-13 05:43:34] 2025-10-13 09:42:28,501 | INFO     | exitcode: 0
[2025-10-13 05:43:34] 2025-10-13 09:42:28,501 | INFO     | exitmsg: OK
[2025-10-13 05:43:34] 2025-10-13 09:42:28,501 | INFO     | cpuconsumptiontime: 42991 s
[2025-10-13 05:43:34] 2025-10-13 09:42:28,501 | INFO     | nevents: 400
[2025-10-13 05:43:34] 2025-10-13 09:42:28,501 | INFO     | neventsw: 0
[2025-10-13 05:43:34] 2025-10-13 09:42:28,501 | INFO     | pid: 3524361
[2025-10-13 05:43:34] 2025-10-13 09:42:28,501 | INFO     | pgrp: 3524361
[2025-10-13 05:43:34] 2025-10-13 09:42:28,501 | INFO     | corecount: 10
[2025-10-13 05:43:34] 2025-10-13 09:42:28,501 | INFO     | event service: False
[2025-10-13 05:43:34] 2025-10-13 09:42:28,502 | INFO     | sizes: {0: 2348686, 1: 2348885, 13: 2348885, 25: 2348941, 35: 2348969, 38: 2349259, 46: 2349415, 20144: 2382394, 20145: 2382393, 20150: 2391447, 20151: 2391503, 20
[2025-10-13 05:43:34] 2025-10-13 09:42:28,502 | INFO     | --------------------------------------------------
[2025-10-13 05:43:34] 2025-10-13 09:42:28,502 | INFO     | 
[2025-10-13 05:43:34] 2025-10-13 09:42:28,502 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 05:43:34] 2025-10-13 09:42:28,562 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:43:34] 2025-10-13 09:42:28,562 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:43:34] 2025-10-13 09:42:28,563 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:43:34] 2025-10-13 09:42:28,563 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:43:34] 2025-10-13 09:42:28,563 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:43:34] 2025-10-13 09:42:28,563 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:43:34] 2025-10-13 09:42:28,563 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:43:34] 2025-10-13 09:42:28,563 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:43:34] 2025-10-13 09:42:28,563 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:43:34] 2025-10-13 09:42:28,563 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:43:34] 2025-10-13 09:42:28,563 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:43:34] 2025-10-13 09:42:28,563 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:43:34] 2025-10-13 09:42:28,564 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:43:34] 2025-10-13 09:42:28,564 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:43:34] 2025-10-13 09:42:28,564 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:43:34] 2025-10-13 09:42:28,564 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:43:34] 2025-10-13 09:42:28,564 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:43:34] 2025-10-13 09:42:28,564 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:43:34] 2025-10-13 09:42:28,564 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:43:34] 2025-10-13 09:42:28,564 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:43:34] 2025-10-13 09:42:28,564 | INFO     | job 6840961514 has completed (purged errors)
[2025-10-13 05:43:34] 2025-10-13 09:42:28,565 | INFO     | overall cleanup function is called
[2025-10-13 05:43:34] 2025-10-13 09:42:29,623 | INFO     | --- collectZombieJob: --- 10, [3524361]
[2025-10-13 05:43:34] 2025-10-13 09:42:29,623 | INFO     | zombie collector waiting for pid 3524361
[2025-10-13 05:43:34] 2025-10-13 09:42:29,623 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:43:34] 2025-10-13 09:42:29,623 | INFO     | collected zombie processes
[2025-10-13 05:43:34] 2025-10-13 09:42:29,624 | INFO     | will attempt to kill all subprocesses of pid=3524361
[2025-10-13 05:43:34] 2025-10-13 09:42:31,323 | INFO     | PID=3483161 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:43:34] 2025-10-13 09:42:31,323 | INFO     | .. there are 51 such processes running
[2025-10-13 05:43:34] 2025-10-13 09:42:31,609 | INFO     | process IDs to be killed: [3524361] (in reverse order)
[2025-10-13 05:43:34] 2025-10-13 09:42:31,826 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:43:34] 2025-10-13 09:42:31,827 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:43:34] 2025-10-13 09:42:31,959 | INFO     | did not find any defunct processes belonging to 3524361
[2025-10-13 05:43:34] 2025-10-13 09:42:32,041 | INFO     | did not find any defunct processes belonging to 3524361
[2025-10-13 05:43:34] 2025-10-13 09:42:32,042 | INFO     | ready for new job
[2025-10-13 05:43:34] 2025-10-13 09:42:32,042 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:43:34] 2025-10-13 09:42:32,048 | INFO     | ***************************************
[2025-10-13 05:43:34] 2025-10-13 09:42:32,049 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:43:34] 2025-10-13 09:42:32,049 | INFO     | ***************************************
[2025-10-13 05:43:34] 2025-10-13 09:42:32,049 | INFO     | 
[2025-10-13 05:43:34] 2025-10-13 09:42:32,085 | INFO     | architecture information:
[2025-10-13 05:43:34] 2025-10-13 09:42:32,086 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:43:34] 2025-10-13 09:42:32,200 | INFO     | cat /etc/os-release:
[2025-10-13 05:43:34] NAME="CentOS Linux"
[2025-10-13 05:43:34] VERSION="7 (Core)"
[2025-10-13 05:43:34] ID="centos"
[2025-10-13 05:43:34] ID_LIKE="rhel fedora"
[2025-10-13 05:43:34] VERSION_ID="7"
[2025-10-13 05:43:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:43:34] ANSI_COLOR="0;31"
[2025-10-13 05:43:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:43:34] HOME_URL="https://www.centos.org/"
[2025-10-13 05:43:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:43:34] 
[2025-10-13 05:43:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:43:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:43:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:43:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:43:34] 
[2025-10-13 05:43:34] 2025-10-13 09:42:32,200 | INFO     | ***************************************
[2025-10-13 05:43:34] 2025-10-13 09:42:32,704 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 05:43:34] 2025-10-13 09:42:32,725 | INFO     | sufficient remaining disk space (94602526720 B)
[2025-10-13 05:43:34] 2025-10-13 09:42:32,725 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:43:34] 2025-10-13 09:42:32,726 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:43:34] 2025-10-13 09:42:32,726 | INFO     | update_server=False
[2025-10-13 05:43:34] 2025-10-13 09:42:32,726 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:43:34] 2025-10-13 09:42:32,727 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:43:34] 2025-10-13 09:42:32,803 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 05:43:34] 2025-10-13 09:42:32,803 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 05:43:34] 2025-10-13 09:42:32,803 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:43:34] 2025-10-13 09:42:32,803 | INFO     | will abort loop
[2025-10-13 05:43:34] 2025-10-13 09:42:33,000 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:43:34] 2025-10-13 09:42:33,183 | INFO     | all payload control threads have been joined
[2025-10-13 05:43:34] 2025-10-13 09:42:33,367 | INFO     | all data control threads have been joined
[2025-10-13 05:43:34] 2025-10-13 09:42:33,559 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:43:34] 2025-10-13 09:42:33,659 | INFO     | all job control threads have been joined
[2025-10-13 05:43:34] 2025-10-13 09:42:33,732 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:43:34] 2025-10-13 09:42:33,802 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:43:34] 2025-10-13 09:42:33,809 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:43:34] 2025-10-13 09:42:34,189 | INFO     | [payload] control thread has finished
[2025-10-13 05:43:34] 2025-10-13 09:42:34,218 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:43:34] 2025-10-13 09:42:34,374 | INFO     | [data] control thread has finished
[2025-10-13 05:43:34] 2025-10-13 09:42:34,565 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:43:34] 2025-10-13 09:42:34,665 | INFO     | [job] control thread has finished
[2025-10-13 05:43:34] 2025-10-13 09:42:34,734 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:43:34] 2025-10-13 09:42:34,803 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:43:34] 2025-10-13 09:42:34,803 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:43:34] 2025-10-13 09:42:34,845 | INFO     | [job] validate thread has finished
[2025-10-13 05:43:34] 2025-10-13 09:42:34,845 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:43:34] 2025-10-13 09:42:35,008 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:43:34] 2025-10-13 09:42:35,017 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:43:34] 2025-10-13 09:42:37,009 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:43:34] 2025-10-13 09:43:04,536 | INFO     | PID=3483161 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:43:34] 2025-10-13 09:43:04,537 | INFO     | .. there are 51 such processes running
[2025-10-13 05:43:34] 2025-10-13 09:43:04,537 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:43:34] 2025-10-13 09:43:04,537 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:43:34] 2025-10-13 09:43:04,537 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:43:34] 2025-10-13 09:43:27,915 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:43:34] 2025-10-13 09:43:28,743 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139635525171008)>', '<ExcThread(monitor, started 139634814215936)>']
[2025-10-13 05:43:34] 2025-10-13 09:43:29,706 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:43:34] 2025-10-13 09:43:29,706 | INFO     | [monitor] control thread has ended
[2025-10-13 05:43:34] 2025-10-13 09:43:33,770 | INFO     | all workflow threads have been joined
[2025-10-13 05:43:34] 2025-10-13 09:43:33,770 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:43:34] 2025-10-13 09:43:33,770 | INFO     | traces error code: 0
[2025-10-13 05:43:34] 2025-10-13 09:43:33,770 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:43:34] 2025-10-13 09:43:34,092 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:43:34] 2025-10-13 09:43:34,102 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:43:34] 2025-10-13 09:43:34,122 [wrapper] pilotpid: 3483161
[2025-10-13 05:43:34] 2025-10-13 09:43:34,148 [wrapper] Pilot exit status: 0
[2025-10-13 05:43:34] 2025-10-13 09:43:34,268 [wrapper] pandaids: 6840961514
[2025-10-13 05:43:34] 2025-10-13 09:43:34,536 [wrapper] cleanup supervisor_pilot  598855 3483162
[2025-10-13 05:43:34] 2025-10-13 09:43:34,539 [wrapper] Test setup, not cleaning
[2025-10-13 05:43:34] 2025-10-13 09:43:34,541 [wrapper] apfmon messages muted
[2025-10-13 05:43:34] 2025-10-13 09:43:34,544 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:43:34] 2025-10-13 09:43:34,546 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:43:34]  *** Error codes and diagnostics ***
[2025-10-13 05:43:34]     "exeErrorCode": 0,
[2025-10-13 05:43:34]     "exeErrorDiag": "",
[2025-10-13 05:43:34]     "pilotErrorCode": 0,
[2025-10-13 05:43:34]     "pilotErrorDiag": "",
[2025-10-13 05:43:34]  *** Listing of results directory ***
[2025-10-13 05:43:34] total 410464
[2025-10-13 05:43:34] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 18:57 pilot3.tar.gz
[2025-10-13 05:43:34] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:01 queuedata.json
[2025-10-13 05:43:34] -rwx------. 1 boincer umatlas     36292 Oct 12 19:01 runpilot2-wrapper.sh
[2025-10-13 05:43:34] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:43:34] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:03 run_atlas
[2025-10-13 05:43:34] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:03 job.xml
[2025-10-13 05:43:34] -rw-r--r--. 2 boincer umatlas 221370243 Oct 13 00:03 EVNT.46676267._004642.pool.root.1
[2025-10-13 05:43:34] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:03 start_atlas.sh
[2025-10-13 05:43:34] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:03 shared
[2025-10-13 05:43:34] -rw-r--r--. 2 boincer umatlas    569683 Oct 13 00:03 input.tar.gz
[2025-10-13 05:43:34] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:03 boinc_lockfile
[2025-10-13 05:43:34] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:03 pandaJob.out
[2025-10-13 05:43:34] -rw-------. 1 boincer umatlas    974373 Oct 13 00:04 agis_schedconf.cvmfs.json
[2025-10-13 05:43:34] drwx------. 5 boincer umatlas      4096 Oct 13 00:04 pilot3
[2025-10-13 05:43:34] -rw-r--r--. 1 boincer umatlas      6866 Oct 13 05:40 init_data.xml
[2025-10-13 05:43:34] -rw-------. 1 boincer umatlas 189558113 Oct 13 05:40 HITS.46676269._091813.pool.root.1
[2025-10-13 05:43:34] -rw-r--r--. 1 boincer umatlas       530 Oct 13 05:41 boinc_task_state.xml
[2025-10-13 05:43:34] -rw-------. 1 boincer umatlas      1046 Oct 13 05:41 memory_monitor_summary.json
[2025-10-13 05:43:34] -rw-------. 1 boincer umatlas   1560580 Oct 13 05:42 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:43:34] -rw-------. 1 boincer umatlas    547548 Oct 13 05:42 log.46676269._091813.job.log.tgz.1
[2025-10-13 05:43:34] -rw-------. 1 boincer umatlas      7833 Oct 13 05:42 heartbeat.json
[2025-10-13 05:43:34] -rw-------. 1 boincer umatlas        95 Oct 13 05:42 pilot_heartbeat.json
[2025-10-13 05:43:34] -rw-r--r--. 1 boincer umatlas        27 Oct 13 05:43 wrapper_checkpoint.txt
[2025-10-13 05:43:34] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 05:43 boinc_mmap_file
[2025-10-13 05:43:34] -rw-------. 1 boincer umatlas      5010 Oct 13 05:43 pilotlog.txt
[2025-10-13 05:43:34] -rw-------. 1 boincer umatlas   2196874 Oct 13 05:43 log.46676269._091813.job.log.1
[2025-10-13 05:43:34] -rw-------. 1 boincer umatlas       357 Oct 13 05:43 output.list
[2025-10-13 05:43:34] -rw-r--r--. 1 boincer umatlas       620 Oct 13 05:43 runtime_log
[2025-10-13 05:43:34] -rw-------. 1 boincer umatlas   2764800 Oct 13 05:43 result.tar.gz
[2025-10-13 05:43:34] -rw-------. 1 boincer umatlas       656 Oct 13 05:43 tCXKDmlFKS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm7EVMDmig89To.diag
[2025-10-13 05:43:34] -rw-r--r--. 1 boincer umatlas      8706 Oct 13 05:43 runtime_log.err
[2025-10-13 05:43:34] -rw-r--r--. 1 boincer umatlas     21228 Oct 13 05:43 stderr.txt
[2025-10-13 05:43:34] HITS file was successfully produced:
[2025-10-13 05:43:34] -rw-------. 1 boincer umatlas 189558113 Oct 13 05:40 shared/HITS.pool.root.1
[2025-10-13 05:43:34]  *** Contents of shared directory: ***
[2025-10-13 05:43:34] total 404580
[2025-10-13 05:43:34] -rw-r--r--. 2 boincer umatlas 221370243 Oct 13 00:03 ATLAS.root_0
[2025-10-13 05:43:34] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:03 start_atlas.sh
[2025-10-13 05:43:34] -rw-r--r--. 2 boincer umatlas    569683 Oct 13 00:03 input.tar.gz
[2025-10-13 05:43:34] -rw-------. 1 boincer umatlas 189558113 Oct 13 05:40 HITS.pool.root.1
[2025-10-13 05:43:34] -rw-------. 1 boincer umatlas   2764800 Oct 13 05:43 result.tar.gz
05:43:36 (3461058): run_atlas exited; CPU time 44014.323649
05:43:36 (3461058): called boinc_finish(0)

</stderr_txt>
]]>

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