Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:06 (3314009): wrapper (7.7.26015): starting
00:01:06 (3314009): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:01:06] Arguments: --nthreads 12
[2025-10-13 00:01:06] Threads: 12
[2025-10-13 00:01:06] Checking for CVMFS
[2025-10-13 00:01:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:01:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:01:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:01:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:01:07] 2.13.2.0 1863115 16594 197740 151475 -6558 1580 18114230 32503809 45256 16776704 0 110301904 99.670 100473402 17592 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:01:07] CVMFS is ok
[2025-10-13 00:01:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:01:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:01:07] Further information can be found at the LHC@home message board.
[2025-10-13 00:01:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:01:07] Checking for apptainer binary...
[2025-10-13 00:01:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:01:08] Running /usr/bin/apptainer --version
[2025-10-13 00:01:08] apptainer version 1.4.3-1.el9
[2025-10-13 00:01:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:01:08] c7-3-16.aglt2.org
[2025-10-13 00:01:08] apptainer works
[2025-10-13 00:01:08] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:01:08] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:01:09] Starting ATLAS job with PandaID=6840852611
[2025-10-13 00:01:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:40:44]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:40:44] 2025-10-13 10:40:10,306 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:40:44] 2025-10-13 10:40:11,031 | INFO     | PID=3322610 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 06:40:44] 2025-10-13 10:40:11,031 | INFO     | .. there are 57 such processes running
[2025-10-13 06:40:44] 2025-10-13 10:40:11,431 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 06:40:44] 2025-10-13 10:40:11,436 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3115.2792187500013
[2025-10-13 06:40:44] 2025-10-13 10:40:11,448 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6840852611/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:40:44] 2025-10-13 10:40:11,449 | INFO     | extracted standard info from prmon json
[2025-10-13 06:40:44] 2025-10-13 10:40:11,449 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 06:40:44] 2025-10-13 10:40:11,449 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 06:40:44] 2025-10-13 10:40:11,449 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:40:44] 2025-10-13 10:40:11,449 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:40:44] 2025-10-13 10:40:11,454 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:40:44] 2025-10-13 10:40:11,454 | INFO     | sum of square deviations: 18535591425.043427
[2025-10-13 06:40:44] 2025-10-13 10:40:11,457 | INFO     | sum of deviations: 189090089644.26096
[2025-10-13 06:40:44] 2025-10-13 10:40:11,457 | INFO     | mean x: 1760340062.0869565
[2025-10-13 06:40:44] 2025-10-13 10:40:11,457 | INFO     | mean y: 2408396.462915601
[2025-10-13 06:40:44] 2025-10-13 10:40:11,457 | INFO     | -- intersect: -17955629872.26347
[2025-10-13 06:40:44] 2025-10-13 10:40:11,457 | INFO     | intersect: -17955629872.26347
[2025-10-13 06:40:44] 2025-10-13 10:40:11,457 | INFO     | chi2: 3.468669937528931
[2025-10-13 06:40:44] 2025-10-13 10:40:11,458 | INFO     | sum of square deviations: 17833546053.678535
[2025-10-13 06:40:44] 2025-10-13 10:40:11,461 | INFO     | sum of deviations: 213187493196.88092
[2025-10-13 06:40:44] 2025-10-13 10:40:11,461 | INFO     | mean x: 1760339909.5854921
[2025-10-13 06:40:44] 2025-10-13 10:40:11,461 | INFO     | mean y: 2413573.4430051814
[2025-10-13 06:40:44] 2025-10-13 10:40:11,461 | INFO     | -- intersect: -21041211254.135544
[2025-10-13 06:40:44] 2025-10-13 10:40:11,461 | INFO     | intersect: -21041211254.135544
[2025-10-13 06:40:44] 2025-10-13 10:40:11,461 | INFO     | chi2: 2.6506582894798707
[2025-10-13 06:40:44] 2025-10-13 10:40:11,461 | INFO     | current chi2=2.6506582894798707 (change=23.582862099350084 %)
[2025-10-13 06:40:44] 2025-10-13 10:40:11,461 | INFO     | right removable region: 385
[2025-10-13 06:40:44] 2025-10-13 10:40:11,462 | INFO     | sum of square deviations: 17833549287.50507
[2025-10-13 06:40:44] 2025-10-13 10:40:11,465 | INFO     | sum of deviations: 94699657779.27469
[2025-10-13 06:40:44] 2025-10-13 10:40:11,465 | INFO     | mean x: 1760340214.5880828
[2025-10-13 06:40:44] 2025-10-13 10:40:11,465 | INFO     | mean y: 2428854.6683937823
[2025-10-13 06:40:44] 2025-10-13 10:40:11,465 | INFO     | -- intersect: -9345324259.928144
[2025-10-13 06:40:44] 2025-10-13 10:40:11,465 | INFO     | intersect: -9345324259.928144
[2025-10-13 06:40:44] 2025-10-13 10:40:11,465 | INFO     | chi2: 1.0999420140698368
[2025-10-13 06:40:44] 2025-10-13 10:40:11,466 | INFO     | current chi2=1.0999420140698368 (change=68.28922803610908 %)
[2025-10-13 06:40:44] 2025-10-13 10:40:11,466 | INFO     | sum of square deviations: 17149460974.965834
[2025-10-13 06:40:44] 2025-10-13 10:40:11,469 | INFO     | sum of deviations: 68993702955.39635
[2025-10-13 06:40:44] 2025-10-13 10:40:11,469 | INFO     | mean x: 1760340367.089239
[2025-10-13 06:40:44] 2025-10-13 10:40:11,469 | INFO     | mean y: 2434566.194225722
[2025-10-13 06:40:44] 2025-10-13 10:40:11,469 | INFO     | -- intersect: -7079560638.473732
[2025-10-13 06:40:44] 2025-10-13 10:40:11,469 | INFO     | intersect: -7079560638.473732
[2025-10-13 06:40:44] 2025-10-13 10:40:11,470 | INFO     | chi2: 0.9330741941468557
[2025-10-13 06:40:44] 2025-10-13 10:40:11,470 | INFO     | current chi2=0.9330741941468557 (change=15.170601521580437 %)
[2025-10-13 06:40:44] 2025-10-13 10:40:11,470 | INFO     | left removable region: 20
[2025-10-13 06:40:44] 2025-10-13 10:40:11,470 | INFO     | sum of square deviations: 15078321264.01645
[2025-10-13 06:40:44] 2025-10-13 10:40:11,472 | INFO     | sum of deviations: 78346153798.60004
[2025-10-13 06:40:44] 2025-10-13 10:40:11,473 | INFO     | mean x: 1760340489.090411
[2025-10-13 06:40:44] 2025-10-13 10:40:11,473 | INFO     | mean y: 2443742.8
[2025-10-13 06:40:44] 2025-10-13 10:40:11,473 | INFO     | -- intersect: -9144191633.998117
[2025-10-13 06:40:44] 2025-10-13 10:40:11,473 | INFO     | intersect: -9144191633.998117
[2025-10-13 06:40:44] 2025-10-13 10:40:11,473 | INFO     | chi2: 0.08239404976955138
[2025-10-13 06:40:44] 2025-10-13 10:40:11,473 | INFO     | -- intersect: -9144191633.998117
[2025-10-13 06:40:44] 2025-10-13 10:40:11,473 | INFO     | current memory leak: 5.20 B/s (using 365 data points, chi2=0.08)
[2025-10-13 06:40:44] 2025-10-13 10:40:11,474 | INFO     | could have reported an average CPU frequency of 3149 MHz (17 samples)
[2025-10-13 06:40:44] 2025-10-13 10:40:11,474 | INFO     | ..............................
[2025-10-13 06:40:44] 2025-10-13 10:40:11,474 | INFO     | . Timing measurements:
[2025-10-13 06:40:44] 2025-10-13 10:40:11,474 | INFO     | . get job = 0 s
[2025-10-13 06:40:44] 2025-10-13 10:40:11,474 | INFO     | . initial setup = 4 s
[2025-10-13 06:40:44] 2025-10-13 10:40:11,474 | INFO     | . payload setup = 19 s
[2025-10-13 06:40:44] 2025-10-13 10:40:11,474 | INFO     | . stage-in = 0 s
[2025-10-13 06:40:44] 2025-10-13 10:40:11,474 | INFO     | . payload execution = 23836 s
[2025-10-13 06:40:44] 2025-10-13 10:40:11,474 | INFO     | . stage-out = 3 s
[2025-10-13 06:40:44] 2025-10-13 10:40:11,474 | INFO     | . log creation = 0 s
[2025-10-13 06:40:44] 2025-10-13 10:40:11,474 | INFO     | ..............................
[2025-10-13 06:40:44] 2025-10-13 10:40:11,630 | INFO     | 
[2025-10-13 06:40:44] 2025-10-13 10:40:11,630 | INFO     | job summary report
[2025-10-13 06:40:44] 2025-10-13 10:40:11,630 | INFO     | --------------------------------------------------
[2025-10-13 06:40:44] 2025-10-13 10:40:11,630 | INFO     | PanDA job id: 6840852611
[2025-10-13 06:40:44] 2025-10-13 10:40:11,630 | INFO     | task id: 46676269
[2025-10-13 06:40:44] 2025-10-13 10:40:11,630 | INFO     | errors: (none)
[2025-10-13 06:40:44] 2025-10-13 10:40:11,630 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:40:44] 2025-10-13 10:40:11,630 | INFO     | pilot state: finished 
[2025-10-13 06:40:44] 2025-10-13 10:40:11,630 | INFO     | transexitcode: 0
[2025-10-13 06:40:44] 2025-10-13 10:40:11,630 | INFO     | exeerrorcode: 0
[2025-10-13 06:40:44] 2025-10-13 10:40:11,631 | INFO     | exeerrordiag: 
[2025-10-13 06:40:44] 2025-10-13 10:40:11,631 | INFO     | exitcode: 0
[2025-10-13 06:40:44] 2025-10-13 10:40:11,631 | INFO     | exitmsg: OK
[2025-10-13 06:40:44] 2025-10-13 10:40:11,631 | INFO     | cpuconsumptiontime: 31265 s
[2025-10-13 06:40:44] 2025-10-13 10:40:11,631 | INFO     | nevents: 400
[2025-10-13 06:40:44] 2025-10-13 10:40:11,631 | INFO     | neventsw: 0
[2025-10-13 06:40:44] 2025-10-13 10:40:11,631 | INFO     | pid: 3356385
[2025-10-13 06:40:44] 2025-10-13 10:40:11,631 | INFO     | pgrp: 3356385
[2025-10-13 06:40:44] 2025-10-13 10:40:11,631 | INFO     | corecount: 12
[2025-10-13 06:40:44] 2025-10-13 10:40:11,631 | INFO     | event service: False
[2025-10-13 06:40:44] 2025-10-13 10:40:11,631 | INFO     | sizes: {0: 2348857, 11: 2348857, 15: 2349147, 22: 2349175, 23860: 2383156, 23864: 2392154, 23865: 2392338, 23882: 2392596}
[2025-10-13 06:40:44] 2025-10-13 10:40:11,631 | INFO     | --------------------------------------------------
[2025-10-13 06:40:44] 2025-10-13 10:40:11,631 | INFO     | 
[2025-10-13 06:40:44] 2025-10-13 10:40:11,632 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-10-13 06:40:44] 2025-10-13 10:40:11,699 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:40:44] 2025-10-13 10:40:11,699 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:40:44] 2025-10-13 10:40:11,699 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:40:44] 2025-10-13 10:40:11,699 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:40:44] 2025-10-13 10:40:11,699 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:40:44] 2025-10-13 10:40:11,699 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:40:44] 2025-10-13 10:40:11,699 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:40:44] 2025-10-13 10:40:11,700 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:40:44] 2025-10-13 10:40:11,700 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:40:44] 2025-10-13 10:40:11,700 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:40:44] 2025-10-13 10:40:11,700 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:40:44] 2025-10-13 10:40:11,700 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:40:44] 2025-10-13 10:40:11,700 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:40:44] 2025-10-13 10:40:11,700 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:40:44] 2025-10-13 10:40:11,700 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:40:44] 2025-10-13 10:40:11,700 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:40:44] 2025-10-13 10:40:11,721 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:40:44] 2025-10-13 10:40:11,721 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:40:44] 2025-10-13 10:40:11,721 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:40:44] 2025-10-13 10:40:11,721 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:40:44] 2025-10-13 10:40:11,721 | INFO     | job 6840852611 has completed (purged errors)
[2025-10-13 06:40:44] 2025-10-13 10:40:11,721 | INFO     | overall cleanup function is called
[2025-10-13 06:40:44] 2025-10-13 10:40:12,761 | INFO     | --- collectZombieJob: --- 10, [3356385]
[2025-10-13 06:40:44] 2025-10-13 10:40:12,761 | INFO     | zombie collector waiting for pid 3356385
[2025-10-13 06:40:44] 2025-10-13 10:40:12,761 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:40:44] 2025-10-13 10:40:12,761 | INFO     | collected zombie processes
[2025-10-13 06:40:44] 2025-10-13 10:40:12,761 | INFO     | will attempt to kill all subprocesses of pid=3356385
[2025-10-13 06:40:44] 2025-10-13 10:40:14,239 | INFO     | process IDs to be killed: [3356385] (in reverse order)
[2025-10-13 06:40:44] 2025-10-13 10:40:14,862 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:40:44] 2025-10-13 10:40:14,862 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:40:44] 2025-10-13 10:40:14,911 | INFO     | did not find any defunct processes belonging to 3356385
[2025-10-13 06:40:44] 2025-10-13 10:40:14,961 | INFO     | did not find any defunct processes belonging to 3356385
[2025-10-13 06:40:44] 2025-10-13 10:40:14,961 | INFO     | ready for new job
[2025-10-13 06:40:44] 2025-10-13 10:40:14,961 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:40:44] 2025-10-13 10:40:14,967 | INFO     | ***************************************
[2025-10-13 06:40:44] 2025-10-13 10:40:14,967 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:40:44] 2025-10-13 10:40:14,967 | INFO     | ***************************************
[2025-10-13 06:40:44] 2025-10-13 10:40:14,967 | INFO     | 
[2025-10-13 06:40:44] 2025-10-13 10:40:14,977 | INFO     | architecture information:
[2025-10-13 06:40:44] 2025-10-13 10:40:14,977 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:40:44] 2025-10-13 10:40:15,021 | INFO     | cat /etc/os-release:
[2025-10-13 06:40:44] NAME="CentOS Linux"
[2025-10-13 06:40:44] VERSION="7 (Core)"
[2025-10-13 06:40:44] ID="centos"
[2025-10-13 06:40:44] ID_LIKE="rhel fedora"
[2025-10-13 06:40:44] VERSION_ID="7"
[2025-10-13 06:40:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:40:44] ANSI_COLOR="0;31"
[2025-10-13 06:40:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:40:44] HOME_URL="https://www.centos.org/"
[2025-10-13 06:40:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:40:44] 
[2025-10-13 06:40:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:40:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:40:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:40:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:40:44] 
[2025-10-13 06:40:44] 2025-10-13 10:40:15,021 | INFO     | ***************************************
[2025-10-13 06:40:44] 2025-10-13 10:40:15,525 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-10-13 06:40:44] 2025-10-13 10:40:15,578 | INFO     | sufficient remaining disk space (93896835072 B)
[2025-10-13 06:40:44] 2025-10-13 10:40:15,578 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:40:44] 2025-10-13 10:40:15,578 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:40:44] 2025-10-13 10:40:15,578 | INFO     | update_server=False
[2025-10-13 06:40:44] 2025-10-13 10:40:15,578 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:40:44] 2025-10-13 10:40:15,578 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:40:44] 2025-10-13 10:40:16,111 | INFO     | all job control threads have been joined
[2025-10-13 06:40:44] 2025-10-13 10:40:16,288 | INFO     | all payload control threads have been joined
[2025-10-13 06:40:44] 2025-10-13 10:40:16,374 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:40:44] 2025-10-13 10:40:16,374 | INFO     | aborting loop
[2025-10-13 06:40:44] 2025-10-13 10:40:16,417 | INFO     | all data control threads have been joined
[2025-10-13 06:40:44] 2025-10-13 10:40:16,583 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:40:44] 2025-10-13 10:40:16,684 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:40:44] 2025-10-13 10:40:17,129 | INFO     | [job] control thread has finished
[2025-10-13 06:40:44] 2025-10-13 10:40:17,258 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:40:44] 2025-10-13 10:40:17,272 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:40:44] 2025-10-13 10:40:17,294 | INFO     | [payload] control thread has finished
[2025-10-13 06:40:44] 2025-10-13 10:40:17,329 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:40:44] 2025-10-13 10:40:17,380 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:40:44] 2025-10-13 10:40:17,425 | INFO     | [data] control thread has finished
[2025-10-13 06:40:44] 2025-10-13 10:40:17,585 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:40:44] 2025-10-13 10:40:17,610 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:40:44] 2025-10-13 10:40:17,709 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:40:44] 2025-10-13 10:40:17,781 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:40:44] 2025-10-13 10:40:17,882 | INFO     | [job] validate thread has finished
[2025-10-13 06:40:44] 2025-10-13 10:40:17,882 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:40:44] 2025-10-13 10:40:18,008 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:40:44] 2025-10-13 10:40:19,080 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:40:44] 2025-10-13 10:40:23,104 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:40:44] 2025-10-13 10:40:25,607 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:40:44] 2025-10-13 10:40:27,450 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140246874081088)>', '<ExcThread(monitor, started 140246243075840)>']
[2025-10-13 06:40:44] 2025-10-13 10:40:32,476 | INFO     | all workflow threads have been joined
[2025-10-13 06:40:44] 2025-10-13 10:40:32,476 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:40:44] 2025-10-13 10:40:32,476 | INFO     | traces error code: 0
[2025-10-13 06:40:44] 2025-10-13 10:40:32,476 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:40:44] 2025-10-13 10:40:43,928 | INFO     | PID=3322610 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 06:40:44] 2025-10-13 10:40:43,929 | INFO     | .. there are 56 such processes running
[2025-10-13 06:40:44] 2025-10-13 10:40:43,929 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:40:44] 2025-10-13 10:40:43,929 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:40:44] 2025-10-13 10:40:43,929 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:40:44] 2025-10-13 10:40:43,929 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:40:44] 2025-10-13 10:40:43,929 | INFO     | [monitor] control thread has ended
[2025-10-13 06:40:44] 2025-10-13 10:40:44,456 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:40:44] 2025-10-13 10:40:44,458 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:40:44] 2025-10-13 10:40:44,461 [wrapper] pilotpid: 3322610
[2025-10-13 06:40:44] 2025-10-13 10:40:44,463 [wrapper] Pilot exit status: 0
[2025-10-13 06:40:44] 2025-10-13 10:40:44,491 [wrapper] pandaids: 6840852611
[2025-10-13 06:40:44] 2025-10-13 10:40:44,644 [wrapper] cleanup supervisor_pilot 1355729 3322611
[2025-10-13 06:40:44] 2025-10-13 10:40:44,653 [wrapper] Test setup, not cleaning
[2025-10-13 06:40:44] 2025-10-13 10:40:44,664 [wrapper] apfmon messages muted
[2025-10-13 06:40:44] 2025-10-13 10:40:44,672 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:40:44] 2025-10-13 10:40:44,677 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:40:44]  *** Error codes and diagnostics ***
[2025-10-13 06:40:44]     "exeErrorCode": 0,
[2025-10-13 06:40:44]     "exeErrorDiag": "",
[2025-10-13 06:40:44]     "pilotErrorCode": 0,
[2025-10-13 06:40:44]     "pilotErrorDiag": "",
[2025-10-13 06:40:44]  *** Listing of results directory ***
[2025-10-13 06:40:44] total 410032
[2025-10-13 06:40:44] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:57 pilot3.tar.gz
[2025-10-13 06:40:44] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 18:47 queuedata.json
[2025-10-13 06:40:44] -rwx------. 1 boincer umatlas     36292 Oct 12 18:47 runpilot2-wrapper.sh
[2025-10-13 06:40:44] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:40:44] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:01 run_atlas
[2025-10-13 06:40:44] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:01 job.xml
[2025-10-13 06:40:44] -rw-r--r--. 2 boincer umatlas 220055697 Oct 13 00:01 EVNT.46676267._004629.pool.root.1
[2025-10-13 06:40:44] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:01 shared
[2025-10-13 06:40:44] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 00:01 input.tar.gz
[2025-10-13 06:40:44] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:01 start_atlas.sh
[2025-10-13 06:40:44] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:01 boinc_lockfile
[2025-10-13 06:40:44] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:01 pandaJob.out
[2025-10-13 06:40:44] -rw-------. 1 boincer umatlas    979287 Oct 13 00:01 agis_schedconf.cvmfs.json
[2025-10-13 06:40:44] drwx------. 5 boincer umatlas      4096 Oct 13 00:01 pilot3
[2025-10-13 06:40:44] -rw-r--r--. 1 boincer umatlas      6937 Oct 13 06:37 init_data.xml
[2025-10-13 06:40:44] -rw-------. 1 boincer umatlas 189848232 Oct 13 06:38 HITS.46676269._091440.pool.root.1
[2025-10-13 06:40:44] -rw-r--r--. 1 boincer umatlas       531 Oct 13 06:38 boinc_task_state.xml
[2025-10-13 06:40:44] -rw-------. 1 boincer umatlas      1045 Oct 13 06:39 memory_monitor_summary.json
[2025-10-13 06:40:44] -rw-------. 1 boincer umatlas   1560580 Oct 13 06:39 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:40:44] -rw-------. 1 boincer umatlas    598512 Oct 13 06:39 log.46676269._091440.job.log.tgz.1
[2025-10-13 06:40:44] -rw-------. 1 boincer umatlas        95 Oct 13 06:39 pilot_heartbeat.json
[2025-10-13 06:40:44] -rw-------. 1 boincer umatlas      7794 Oct 13 06:40 heartbeat.json
[2025-10-13 06:40:44] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 06:40 boinc_mmap_file
[2025-10-13 06:40:44] -rw-r--r--. 1 boincer umatlas        28 Oct 13 06:40 wrapper_checkpoint.txt
[2025-10-13 06:40:44] -rw-------. 1 boincer umatlas       823 Oct 13 06:40 pilotlog.txt
[2025-10-13 06:40:44] -rw-------. 1 boincer umatlas   2431803 Oct 13 06:40 log.46676269._091440.job.log.1
[2025-10-13 06:40:44] -rw-------. 1 boincer umatlas       357 Oct 13 06:40 output.list
[2025-10-13 06:40:44] -rw-r--r--. 1 boincer umatlas       620 Oct 13 06:40 runtime_log
[2025-10-13 06:40:44] -rw-------. 1 boincer umatlas   3051520 Oct 13 06:40 result.tar.gz
[2025-10-13 06:40:44] -rw-r--r--. 1 boincer umatlas      8701 Oct 13 06:40 runtime_log.err
[2025-10-13 06:40:44] -rw-------. 1 boincer umatlas       657 Oct 13 06:40 b9FODmv1JS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBvlNDm1CkN5m.diag
[2025-10-13 06:40:44] -rw-r--r--. 1 boincer umatlas     21300 Oct 13 06:40 stderr.txt
[2025-10-13 06:40:44] HITS file was successfully produced:
[2025-10-13 06:40:44] -rw-------. 1 boincer umatlas 189848232 Oct 13 06:38 shared/HITS.pool.root.1
[2025-10-13 06:40:44]  *** Contents of shared directory: ***
[2025-10-13 06:40:44] total 403864
[2025-10-13 06:40:44] -rw-r--r--. 2 boincer umatlas 220055697 Oct 13 00:01 ATLAS.root_0
[2025-10-13 06:40:44] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 00:01 input.tar.gz
[2025-10-13 06:40:44] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:01 start_atlas.sh
[2025-10-13 06:40:44] -rw-------. 1 boincer umatlas 189848232 Oct 13 06:38 HITS.pool.root.1
[2025-10-13 06:40:44] -rw-------. 1 boincer umatlas   3051520 Oct 13 06:40 result.tar.gz
06:40:46 (3314009): run_atlas exited; CPU time 32112.280953
06:40:46 (3314009): called boinc_finish(0)

</stderr_txt>
]]>

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