Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:59 (3396587): wrapper (7.7.26015): starting
00:00:59 (3396587): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:00:59] Arguments: --nthreads 12
[2025-10-13 00:00:59] Threads: 12
[2025-10-13 00:00:59] Checking for CVMFS
[2025-10-13 00:00:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:00:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:00:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:01:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:01:00] 2.13.2.0 5045 6612 80980 151647 3 357 20983503 40960001 22853 16776704 0 19016333 99.924 3003792 38195 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:01:00] CVMFS is ok
[2025-10-13 00:01:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:01:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:01:00] Further information can be found at the LHC@home message board.
[2025-10-13 00:01:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:01:00] Checking for apptainer binary...
[2025-10-13 00:01:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:01:00] Running /usr/bin/apptainer --version
[2025-10-13 00:01:00] apptainer version 1.4.3-1.el9
[2025-10-13 00:01:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:01:00] c-212-11.aglt2.org
[2025-10-13 00:01:00] apptainer works
[2025-10-13 00:01:00] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:01:00] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:01:00] Starting ATLAS job with PandaID=6840750518
[2025-10-13 00:01:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:14:26]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:14:26] 2025-10-13 09:13:40,487 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:14:26] 2025-10-13 09:13:40,491 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:14:26] 2025-10-13 09:13:40,491 | INFO     | sum of square deviations: 8884375331.271229
[2025-10-13 05:14:26] 2025-10-13 09:13:40,493 | INFO     | sum of deviations: 225200342792.0523
[2025-10-13 05:14:26] 2025-10-13 09:13:40,493 | INFO     | mean x: 1760337499.630719
[2025-10-13 05:14:26] 2025-10-13 09:13:40,493 | INFO     | mean y: 2593162.3986928104
[2025-10-13 05:14:26] 2025-10-13 09:13:40,493 | INFO     | -- intersect: -44618282652.15549
[2025-10-13 05:14:26] 2025-10-13 09:13:40,493 | INFO     | intersect: -44618282652.15549
[2025-10-13 05:14:26] 2025-10-13 09:13:40,493 | INFO     | chi2: 5.597573250639924
[2025-10-13 05:14:26] 2025-10-13 09:13:40,494 | INFO     | sum of square deviations: 8455942288.684356
[2025-10-13 05:14:26] 2025-10-13 09:13:40,496 | INFO     | sum of deviations: 241612040589.9003
[2025-10-13 05:14:26] 2025-10-13 09:13:40,496 | INFO     | mean x: 1760337347.1328905
[2025-10-13 05:14:26] 2025-10-13 09:13:40,496 | INFO     | mean y: 2598905.2524916944
[2025-10-13 05:14:26] 2025-10-13 09:13:40,496 | INFO     | -- intersect: -50295603713.34223
[2025-10-13 05:14:26] 2025-10-13 09:13:40,496 | INFO     | intersect: -50295603713.34223
[2025-10-13 05:14:26] 2025-10-13 09:13:40,496 | INFO     | chi2: 4.892286035775878
[2025-10-13 05:14:26] 2025-10-13 09:13:40,496 | INFO     | current chi2=4.892286035775878 (change=12.599874682897921 %)
[2025-10-13 05:14:26] 2025-10-13 09:13:40,496 | INFO     | right removable region: 300
[2025-10-13 05:14:26] 2025-10-13 09:13:40,497 | INFO     | sum of square deviations: 8455936309.946822
[2025-10-13 05:14:26] 2025-10-13 09:13:40,499 | INFO     | sum of deviations: 128562119608.83383
[2025-10-13 05:14:26] 2025-10-13 09:13:40,499 | INFO     | mean x: 1760337652.129568
[2025-10-13 05:14:26] 2025-10-13 09:13:40,499 | INFO     | mean y: 2627521.0299003324
[2025-10-13 05:14:26] 2025-10-13 09:13:40,499 | INFO     | -- intersect: -26761143099.948025
[2025-10-13 05:14:26] 2025-10-13 09:13:40,499 | INFO     | intersect: -26761143099.948025
[2025-10-13 05:14:26] 2025-10-13 09:13:40,499 | INFO     | chi2: 2.2445083568037223
[2025-10-13 05:14:26] 2025-10-13 09:13:40,499 | INFO     | current chi2=2.2445083568037223 (change=59.902117287216804 %)
[2025-10-13 05:14:26] 2025-10-13 09:13:40,499 | INFO     | sum of square deviations: 8041479434.861454
[2025-10-13 05:14:26] 2025-10-13 09:13:40,501 | INFO     | sum of deviations: 76875317891.31085
[2025-10-13 05:14:26] 2025-10-13 09:13:40,501 | INFO     | mean x: 1760337804.6317568
[2025-10-13 05:14:26] 2025-10-13 09:13:40,501 | INFO     | mean y: 2646494.0945945946
[2025-10-13 05:14:26] 2025-10-13 09:13:40,501 | INFO     | -- intersect: -16825914646.096903
[2025-10-13 05:14:26] 2025-10-13 09:13:40,502 | INFO     | intersect: -16825914646.096903
[2025-10-13 05:14:26] 2025-10-13 09:13:40,502 | INFO     | chi2: 1.3249588688740896
[2025-10-13 05:14:26] 2025-10-13 09:13:40,502 | INFO     | current chi2=1.3249588688740896 (change=40.96886006871951 %)
[2025-10-13 05:14:26] 2025-10-13 09:13:40,502 | INFO     | sum of square deviations: 7640790259.773211
[2025-10-13 05:14:26] 2025-10-13 09:13:40,504 | INFO     | sum of deviations: 45501338437.75255
[2025-10-13 05:14:26] 2025-10-13 09:13:40,504 | INFO     | mean x: 1760337957.1340206
[2025-10-13 05:14:26] 2025-10-13 09:13:40,504 | INFO     | mean y: 2658428.237113402
[2025-10-13 05:14:26] 2025-10-13 09:13:40,504 | INFO     | -- intersect: -10480253735.190655
[2025-10-13 05:14:26] 2025-10-13 09:13:40,504 | INFO     | intersect: -10480253735.190655
[2025-10-13 05:14:26] 2025-10-13 09:13:40,504 | INFO     | chi2: 1.0249175093292453
[2025-10-13 05:14:26] 2025-10-13 09:13:40,505 | INFO     | current chi2=1.0249175093292453 (change=22.64533387363266 %)
[2025-10-13 05:14:26] 2025-10-13 09:13:40,505 | INFO     | left removable region: 30
[2025-10-13 05:14:26] 2025-10-13 09:13:40,505 | INFO     | sum of square deviations: 6103035982.15187
[2025-10-13 05:14:26] 2025-10-13 09:13:40,506 | INFO     | sum of deviations: 17552316914.444458
[2025-10-13 05:14:26] 2025-10-13 09:13:40,507 | INFO     | mean x: 1760338231.6407406
[2025-10-13 05:14:26] 2025-10-13 09:13:40,507 | INFO     | mean y: 2684842.777777778
[2025-10-13 05:14:26] 2025-10-13 09:13:40,507 | INFO     | -- intersect: -5060043708.83674
[2025-10-13 05:14:26] 2025-10-13 09:13:40,507 | INFO     | intersect: -5060043708.83674
[2025-10-13 05:14:26] 2025-10-13 09:13:40,507 | INFO     | chi2: 0.004148035248831522
[2025-10-13 05:14:26] 2025-10-13 09:13:40,507 | INFO     | -- intersect: -5060043708.83674
[2025-10-13 05:14:26] 2025-10-13 09:13:40,507 | INFO     | current memory leak: 2.88 B/s (using 270 data points, chi2=0.00)
[2025-10-13 05:14:26] 2025-10-13 09:13:40,508 | INFO     | could have reported an average CPU frequency of 2934 MHz (14 samples)
[2025-10-13 05:14:26] 2025-10-13 09:13:40,508 | INFO     | ..............................
[2025-10-13 05:14:26] 2025-10-13 09:13:40,508 | INFO     | . Timing measurements:
[2025-10-13 05:14:26] 2025-10-13 09:13:40,508 | INFO     | . get job = 0 s
[2025-10-13 05:14:26] 2025-10-13 09:13:40,508 | INFO     | . initial setup = 3 s
[2025-10-13 05:14:26] 2025-10-13 09:13:40,508 | INFO     | . payload setup = 27 s
[2025-10-13 05:14:26] 2025-10-13 09:13:40,508 | INFO     | . stage-in = 0 s
[2025-10-13 05:14:26] 2025-10-13 09:13:40,508 | INFO     | . payload execution = 18627 s
[2025-10-13 05:14:26] 2025-10-13 09:13:40,508 | INFO     | . stage-out = 2 s
[2025-10-13 05:14:26] 2025-10-13 09:13:40,508 | INFO     | . log creation = 0 s
[2025-10-13 05:14:26] 2025-10-13 09:13:40,508 | INFO     | ..............................
[2025-10-13 05:14:26] 2025-10-13 09:13:41,020 | INFO     | 
[2025-10-13 05:14:26] 2025-10-13 09:13:41,020 | INFO     | job summary report
[2025-10-13 05:14:26] 2025-10-13 09:13:41,020 | INFO     | --------------------------------------------------
[2025-10-13 05:14:26] 2025-10-13 09:13:41,021 | INFO     | PanDA job id: 6840750518
[2025-10-13 05:14:26] 2025-10-13 09:13:41,021 | INFO     | task id: 46676269
[2025-10-13 05:14:26] 2025-10-13 09:13:41,021 | INFO     | errors: (none)
[2025-10-13 05:14:26] 2025-10-13 09:13:41,021 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:14:26] 2025-10-13 09:13:41,021 | INFO     | pilot state: finished 
[2025-10-13 05:14:26] 2025-10-13 09:13:41,021 | INFO     | transexitcode: 0
[2025-10-13 05:14:26] 2025-10-13 09:13:41,021 | INFO     | exeerrorcode: 0
[2025-10-13 05:14:26] 2025-10-13 09:13:41,021 | INFO     | exeerrordiag: 
[2025-10-13 05:14:26] 2025-10-13 09:13:41,021 | INFO     | exitcode: 0
[2025-10-13 05:14:26] 2025-10-13 09:13:41,021 | INFO     | exitmsg: OK
[2025-10-13 05:14:26] 2025-10-13 09:13:41,021 | INFO     | cpuconsumptiontime: 41289 s
[2025-10-13 05:14:26] 2025-10-13 09:13:41,021 | INFO     | nevents: 400
[2025-10-13 05:14:26] 2025-10-13 09:13:41,022 | INFO     | neventsw: 0
[2025-10-13 05:14:26] 2025-10-13 09:13:41,022 | INFO     | pid: 3429810
[2025-10-13 05:14:26] 2025-10-13 09:13:41,022 | INFO     | pgrp: 3429810
[2025-10-13 05:14:26] 2025-10-13 09:13:41,022 | INFO     | corecount: 12
[2025-10-13 05:14:26] 2025-10-13 09:13:41,022 | INFO     | event service: False
[2025-10-13 05:14:26] 2025-10-13 09:13:41,022 | INFO     | sizes: {0: 2348856, 11: 2348856, 18: 2349146, 22: 2349174, 18657: 2381760, 18660: 2390758, 18661: 2390942, 18671: 2391136}
[2025-10-13 05:14:26] 2025-10-13 09:13:41,022 | INFO     | --------------------------------------------------
[2025-10-13 05:14:26] 2025-10-13 09:13:41,022 | INFO     | 
[2025-10-13 05:14:26] 2025-10-13 09:13:41,022 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-10-13 05:14:26] 2025-10-13 09:13:41,171 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:14:26] 2025-10-13 09:13:41,171 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:14:26] 2025-10-13 09:13:41,172 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:14:26] 2025-10-13 09:13:41,172 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:14:26] 2025-10-13 09:13:41,172 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:14:26] 2025-10-13 09:13:41,172 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:14:26] 2025-10-13 09:13:41,172 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:14:26] 2025-10-13 09:13:41,172 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:14:26] 2025-10-13 09:13:41,172 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:14:26] 2025-10-13 09:13:41,172 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:14:26] 2025-10-13 09:13:41,172 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:14:26] 2025-10-13 09:13:41,172 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:14:26] 2025-10-13 09:13:41,172 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:14:26] 2025-10-13 09:13:41,172 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:14:26] 2025-10-13 09:13:41,173 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:14:26] 2025-10-13 09:13:41,173 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:14:26] 2025-10-13 09:13:41,173 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:14:26] 2025-10-13 09:13:41,173 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:14:26] 2025-10-13 09:13:41,173 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:14:26] 2025-10-13 09:13:41,173 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:14:26] 2025-10-13 09:13:41,173 | INFO     | job 6840750518 has completed (purged errors)
[2025-10-13 05:14:26] 2025-10-13 09:13:41,173 | INFO     | overall cleanup function is called
[2025-10-13 05:14:26] 2025-10-13 09:13:42,183 | INFO     | --- collectZombieJob: --- 10, [3429810]
[2025-10-13 05:14:26] 2025-10-13 09:13:42,184 | INFO     | zombie collector waiting for pid 3429810
[2025-10-13 05:14:26] 2025-10-13 09:13:42,184 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:14:26] 2025-10-13 09:13:42,184 | INFO     | collected zombie processes
[2025-10-13 05:14:26] 2025-10-13 09:13:42,185 | INFO     | will attempt to kill all subprocesses of pid=3429810
[2025-10-13 05:14:26] 2025-10-13 09:13:42,617 | INFO     | process IDs to be killed: [3429810] (in reverse order)
[2025-10-13 05:14:26] 2025-10-13 09:13:42,809 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:14:26] 2025-10-13 09:13:42,810 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:14:26] 2025-10-13 09:13:42,915 | INFO     | did not find any defunct processes belonging to 3429810
[2025-10-13 05:14:26] 2025-10-13 09:13:42,973 | INFO     | did not find any defunct processes belonging to 3429810
[2025-10-13 05:14:26] 2025-10-13 09:13:42,974 | INFO     | ready for new job
[2025-10-13 05:14:26] 2025-10-13 09:13:42,974 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:14:26] 2025-10-13 09:13:42,979 | INFO     | ***************************************
[2025-10-13 05:14:26] 2025-10-13 09:13:42,979 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:14:26] 2025-10-13 09:13:42,979 | INFO     | ***************************************
[2025-10-13 05:14:26] 2025-10-13 09:13:42,979 | INFO     | 
[2025-10-13 05:14:26] 2025-10-13 09:13:42,985 | INFO     | architecture information:
[2025-10-13 05:14:26] 2025-10-13 09:13:42,985 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:14:26] 2025-10-13 09:13:43,014 | INFO     | cat /etc/os-release:
[2025-10-13 05:14:26] NAME="CentOS Linux"
[2025-10-13 05:14:26] VERSION="7 (Core)"
[2025-10-13 05:14:26] ID="centos"
[2025-10-13 05:14:26] ID_LIKE="rhel fedora"
[2025-10-13 05:14:26] VERSION_ID="7"
[2025-10-13 05:14:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:14:26] ANSI_COLOR="0;31"
[2025-10-13 05:14:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:14:26] HOME_URL="https://www.centos.org/"
[2025-10-13 05:14:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:14:26] 
[2025-10-13 05:14:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:14:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:14:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:14:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:14:26] 
[2025-10-13 05:14:26] 2025-10-13 09:13:43,014 | INFO     | ***************************************
[2025-10-13 05:14:26] 2025-10-13 09:13:43,516 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-10-13 05:14:26] 2025-10-13 09:13:43,598 | INFO     | sufficient remaining disk space (127782617088 B)
[2025-10-13 05:14:26] 2025-10-13 09:13:43,598 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:14:26] 2025-10-13 09:13:43,598 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:14:26] 2025-10-13 09:13:43,598 | INFO     | update_server=False
[2025-10-13 05:14:26] 2025-10-13 09:13:43,598 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:14:26] 2025-10-13 09:13:43,599 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:14:26] 2025-10-13 09:13:43,666 | INFO     | all data control threads have been joined
[2025-10-13 05:14:26] 2025-10-13 09:13:44,011 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 05:14:26] 2025-10-13 09:13:44,011 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 05:14:26] 2025-10-13 09:13:44,012 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:14:26] 2025-10-13 09:13:44,012 | INFO     | will abort loop
[2025-10-13 05:14:26] 2025-10-13 09:13:44,270 | INFO     | all job control threads have been joined
[2025-10-13 05:14:26] 2025-10-13 09:13:44,604 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:14:26] 2025-10-13 09:13:44,673 | INFO     | [data] control thread has finished
[2025-10-13 05:14:26] 2025-10-13 09:13:44,857 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:14:26] 2025-10-13 09:13:44,994 | INFO     | all payload control threads have been joined
[2025-10-13 05:14:26] 2025-10-13 09:13:45,013 | INFO     | [job] validate thread has finished
[2025-10-13 05:14:26] 2025-10-13 09:13:45,017 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:14:26] 2025-10-13 09:13:45,023 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:14:26] 2025-10-13 09:13:45,275 | INFO     | [job] control thread has finished
[2025-10-13 05:14:26] 2025-10-13 09:13:45,385 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:14:26] 2025-10-13 09:13:45,554 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:14:26] 2025-10-13 09:13:45,600 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:14:26] 2025-10-13 09:13:45,602 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:14:26] 2025-10-13 09:13:45,605 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:14:26] 2025-10-13 09:13:45,644 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:14:26] 2025-10-13 09:13:45,869 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:14:26] 2025-10-13 09:13:46,000 | INFO     | [payload] control thread has finished
[2025-10-13 05:14:26] 2025-10-13 09:13:46,163 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:14:26] 2025-10-13 09:13:46,607 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:14:26] 2025-10-13 09:13:49,612 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:14:26] 2025-10-13 09:14:12,716 | INFO     | PID=3404821 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:14:26] 2025-10-13 09:14:12,717 | INFO     | .. there are 16 such processes running
[2025-10-13 05:14:26] 2025-10-13 09:14:12,717 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:14:26] 2025-10-13 09:14:12,717 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:14:26] 2025-10-13 09:14:12,717 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:14:26] 2025-10-13 09:14:19,356 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:14:26] 2025-10-13 09:14:19,812 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140331274708800)>', '<ExcThread(monitor, started 140330926069504)>']
[2025-10-13 05:14:26] 2025-10-13 09:14:20,756 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:14:26] 2025-10-13 09:14:20,759 | INFO     | [monitor] control thread has ended
[2025-10-13 05:14:26] 2025-10-13 09:14:24,839 | INFO     | all workflow threads have been joined
[2025-10-13 05:14:26] 2025-10-13 09:14:24,839 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:14:26] 2025-10-13 09:14:24,840 | INFO     | traces error code: 0
[2025-10-13 05:14:26] 2025-10-13 09:14:24,840 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:14:26] 2025-10-13 09:14:25,045 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:14:26] 2025-10-13 09:14:25,092 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:14:26] 2025-10-13 09:14:25,111 [wrapper] pilotpid: 3404821
[2025-10-13 05:14:26] 2025-10-13 09:14:25,149 [wrapper] Pilot exit status: 0
[2025-10-13 05:14:26] 2025-10-13 09:14:25,319 [wrapper] pandaids: 6840750518
[2025-10-13 05:14:26] 2025-10-13 09:14:25,903 [wrapper] cleanup supervisor_pilot 4081071 3404822
[2025-10-13 05:14:26] 2025-10-13 09:14:25,921 [wrapper] Test setup, not cleaning
[2025-10-13 05:14:26] 2025-10-13 09:14:25,954 [wrapper] apfmon messages muted
[2025-10-13 05:14:26] 2025-10-13 09:14:25,990 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:14:26] 2025-10-13 09:14:26,023 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:14:26]  *** Error codes and diagnostics ***
[2025-10-13 05:14:26]     "exeErrorCode": 0,
[2025-10-13 05:14:26]     "exeErrorDiag": "",
[2025-10-13 05:14:26]     "pilotErrorCode": 0,
[2025-10-13 05:14:26]     "pilotErrorDiag": "",
[2025-10-13 05:14:26]  *** Listing of results directory ***
[2025-10-13 05:14:26] total 425956
[2025-10-13 05:14:26] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:12 pilot3.tar.gz
[2025-10-13 05:14:26] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 17:23 queuedata.json
[2025-10-13 05:14:26] -rwx------. 1 boincer umatlas     36292 Oct 12 17:25 runpilot2-wrapper.sh
[2025-10-13 05:14:26] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:14:26] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:00 run_atlas
[2025-10-13 05:14:26] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:00 job.xml
[2025-10-13 05:14:26] -rw-r--r--. 2 boincer umatlas 223978105 Oct 13 00:00 EVNT.46676267._004828.pool.root.1
[2025-10-13 05:14:26] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:00 start_atlas.sh
[2025-10-13 05:14:26] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:00 shared
[2025-10-13 05:14:26] -rw-r--r--. 2 boincer umatlas    569686 Oct 13 00:00 input.tar.gz
[2025-10-13 05:14:26] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:00 boinc_lockfile
[2025-10-13 05:14:26] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 00:01 pandaJob.out
[2025-10-13 05:14:26] -rw-------. 1 boincer umatlas    974373 Oct 13 00:01 agis_schedconf.cvmfs.json
[2025-10-13 05:14:26] drwx------. 5 boincer umatlas      4096 Oct 13 00:01 pilot3
[2025-10-13 05:14:26] -rw-r--r--. 1 boincer umatlas      6948 Oct 13 05:09 init_data.xml
[2025-10-13 05:14:26] -rw-------. 1 boincer umatlas 202086547 Oct 13 05:12 HITS.46676269._089890.pool.root.1
[2025-10-13 05:14:26] -rw-r--r--. 1 boincer umatlas       530 Oct 13 05:12 boinc_task_state.xml
[2025-10-13 05:14:26] -rw-------. 1 boincer umatlas      1047 Oct 13 05:13 memory_monitor_summary.json
[2025-10-13 05:14:26] -rw-------. 1 boincer umatlas        95 Oct 13 05:13 pilot_heartbeat.json
[2025-10-13 05:14:26] -rw-------. 1 boincer umatlas   1560580 Oct 13 05:13 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:14:26] -rw-------. 1 boincer umatlas    597090 Oct 13 05:13 log.46676269._089890.job.log.tgz.1
[2025-10-13 05:14:26] -rw-------. 1 boincer umatlas      7808 Oct 13 05:13 heartbeat.json
[2025-10-13 05:14:26] -rw-------. 1 boincer umatlas      5011 Oct 13 05:14 pilotlog.txt
[2025-10-13 05:14:26] -rw-r--r--. 1 boincer umatlas        28 Oct 13 05:14 wrapper_checkpoint.txt
[2025-10-13 05:14:26] -rw-------. 1 boincer umatlas   2509438 Oct 13 05:14 log.46676269._089890.job.log.1
[2025-10-13 05:14:26] -rw-------. 1 boincer umatlas       357 Oct 13 05:14 output.list
[2025-10-13 05:14:26] -rw-r--r--. 1 boincer umatlas       620 Oct 13 05:14 runtime_log
[2025-10-13 05:14:26] -rw-------. 1 boincer umatlas   3123200 Oct 13 05:14 result.tar.gz
[2025-10-13 05:14:26] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 05:14 boinc_mmap_file
[2025-10-13 05:14:26] -rw-------. 1 boincer umatlas       661 Oct 13 05:14 z1dKDmYkIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6elNDmAzSjxn.diag
[2025-10-13 05:14:26] -rw-r--r--. 1 boincer umatlas      8706 Oct 13 05:14 runtime_log.err
[2025-10-13 05:14:26] -rw-r--r--. 1 boincer umatlas     21017 Oct 13 05:14 stderr.txt
[2025-10-13 05:14:27] HITS file was successfully produced:
[2025-10-13 05:14:27] -rw-------. 1 boincer umatlas 202086547 Oct 13 05:12 shared/HITS.pool.root.1
[2025-10-13 05:14:27]  *** Contents of shared directory: ***
[2025-10-13 05:14:27] total 419720
[2025-10-13 05:14:27] -rw-r--r--. 2 boincer umatlas 223978105 Oct 13 00:00 ATLAS.root_0
[2025-10-13 05:14:27] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:00 start_atlas.sh
[2025-10-13 05:14:27] -rw-r--r--. 2 boincer umatlas    569686 Oct 13 00:00 input.tar.gz
[2025-10-13 05:14:27] -rw-------. 1 boincer umatlas 202086547 Oct 13 05:12 HITS.pool.root.1
[2025-10-13 05:14:27] -rw-------. 1 boincer umatlas   3123200 Oct 13 05:14 result.tar.gz
05:14:48 (3396587): run_atlas exited; CPU time 41878.944542
05:14:48 (3396587): called boinc_finish(0)

</stderr_txt>
]]>

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