Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:11:31 (1701715): wrapper (7.7.26015): starting
00:11:31 (1701715): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 00:11:31] Arguments: --nthreads 9
[2025-10-13 00:11:31] Threads: 9
[2025-10-13 00:11:31] Checking for CVMFS
[2025-10-13 00:11:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:11:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:11:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:11:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:11:34] 2.13.2.0 6302 45204 259632 151648 3 19 26294265 32935937 25345 16776704 0 134405141 99.641 123587385 30170 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:11:34] CVMFS is ok
[2025-10-13 00:11:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:11:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:11:34] Further information can be found at the LHC@home message board.
[2025-10-13 00:11:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:11:34] Checking for apptainer binary...
[2025-10-13 00:11:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:11:34] Running /usr/bin/apptainer --version
[2025-10-13 00:11:34] apptainer version 1.4.3-1.el9
[2025-10-13 00:11:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:11:35] c6-1-24-4.aglt2.org
[2025-10-13 00:11:35] apptainer works
[2025-10-13 00:11:35] Set ATHENA_PROC_NUMBER=9
[2025-10-13 00:11:35] Set ATHENA_CORE_NUMBER=9
[2025-10-13 00:11:35] Starting ATLAS job with PandaID=6840850876
[2025-10-13 00:11:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:43:28]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:43:28] 2025-10-13 12:42:20,283 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 08:43:28] 2025-10-13 12:42:20,283 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 08:43:28] 2025-10-13 12:42:20,314 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:43:28] 2025-10-13 12:42:20,334 | INFO     | sum of square deviations: 38063474981.766
[2025-10-13 08:43:28] 2025-10-13 12:42:20,380 | INFO     | sum of deviations: 115098253225.66801
[2025-10-13 08:43:28] 2025-10-13 12:42:20,380 | INFO     | mean x: 1760344151.468813
[2025-10-13 08:43:28] 2025-10-13 12:42:20,380 | INFO     | mean y: 2290669.6237424547
[2025-10-13 08:43:28] 2025-10-13 12:42:20,380 | INFO     | -- intersect: -5320726658.85562
[2025-10-13 08:43:28] 2025-10-13 12:42:20,381 | INFO     | intersect: -5320726658.85562
[2025-10-13 08:43:28] 2025-10-13 12:42:20,381 | INFO     | chi2: 4.674291574946753
[2025-10-13 08:43:28] 2025-10-13 12:42:20,382 | INFO     | sum of square deviations: 36926166580.65657
[2025-10-13 08:43:28] 2025-10-13 12:42:20,412 | INFO     | sum of deviations: 141065310574.64236
[2025-10-13 08:43:28] 2025-10-13 12:42:20,453 | INFO     | mean x: 1760343998.9735773
[2025-10-13 08:43:28] 2025-10-13 12:42:20,453 | INFO     | mean y: 2294119.2032520324
[2025-10-13 08:43:28] 2025-10-13 12:42:20,477 | INFO     | -- intersect: -6722570547.997203
[2025-10-13 08:43:28] 2025-10-13 12:42:20,478 | INFO     | intersect: -6722570547.997203
[2025-10-13 08:43:28] 2025-10-13 12:42:20,480 | INFO     | chi2: 3.998513134126915
[2025-10-13 08:43:28] 2025-10-13 12:42:20,480 | INFO     | current chi2=3.998513134126915 (change=14.457344604728384 %)
[2025-10-13 08:43:28] 2025-10-13 12:42:20,480 | INFO     | right removable region: 491
[2025-10-13 08:43:28] 2025-10-13 12:42:20,481 | INFO     | sum of square deviations: 36926054523.60183
[2025-10-13 08:43:28] 2025-10-13 12:42:20,488 | INFO     | sum of deviations: -8398871182.6748085
[2025-10-13 08:43:28] 2025-10-13 12:42:20,488 | INFO     | mean x: 1760344303.9715447
[2025-10-13 08:43:28] 2025-10-13 12:42:20,488 | INFO     | mean y: 2307206.3089430896
[2025-10-13 08:43:28] 2025-10-13 12:42:20,488 | INFO     | -- intersect: 402699429.00802296
[2025-10-13 08:43:28] 2025-10-13 12:42:20,488 | INFO     | intersect: 402699429.00802296
[2025-10-13 08:43:28] 2025-10-13 12:42:20,489 | INFO     | chi2: 1.890008497680928
[2025-10-13 08:43:28] 2025-10-13 12:42:20,489 | INFO     | current chi2=1.890008497680928 (change=59.565883570229396 %)
[2025-10-13 08:43:28] 2025-10-13 12:42:20,490 | INFO     | sum of square deviations: 35811638381.1909
[2025-10-13 08:43:28] 2025-10-13 12:42:20,535 | INFO     | sum of deviations: -58673721557.663246
[2025-10-13 08:43:28] 2025-10-13 12:42:20,535 | INFO     | mean x: 1760344456.466119
[2025-10-13 08:43:28] 2025-10-13 12:42:20,535 | INFO     | mean y: 2314075.2628336754
[2025-10-13 08:43:28] 2025-10-13 12:42:20,535 | INFO     | -- intersect: 2886459150.80669
[2025-10-13 08:43:28] 2025-10-13 12:42:20,535 | INFO     | intersect: 2886459150.80669
[2025-10-13 08:43:28] 2025-10-13 12:42:20,536 | INFO     | chi2: 1.3998586749721729
[2025-10-13 08:43:28] 2025-10-13 12:42:20,536 | INFO     | current chi2=1.3998586749721729 (change=25.933736451988292 %)
[2025-10-13 08:43:28] 2025-10-13 12:42:20,537 | INFO     | sum of square deviations: 34719844487.32785
[2025-10-13 08:43:28] 2025-10-13 12:42:20,605 | INFO     | sum of deviations: -84643922514.81735
[2025-10-13 08:43:28] 2025-10-13 12:42:20,605 | INFO     | mean x: 1760344608.9626555
[2025-10-13 08:43:28] 2025-10-13 12:42:20,605 | INFO     | mean y: 2317700.2323651453
[2025-10-13 08:43:28] 2025-10-13 12:42:20,605 | INFO     | -- intersect: 4293882794.5056076
[2025-10-13 08:43:28] 2025-10-13 12:42:20,605 | INFO     | intersect: 4293882794.5056076
[2025-10-13 08:43:28] 2025-10-13 12:42:20,606 | INFO     | chi2: 1.2644775043219498
[2025-10-13 08:43:28] 2025-10-13 12:42:20,606 | INFO     | current chi2=1.2644775043219498 (change=9.671059877020387 %)
[2025-10-13 08:43:28] 2025-10-13 12:42:20,606 | INFO     | left removable region: 30
[2025-10-13 08:43:28] 2025-10-13 12:42:20,606 | INFO     | sum of square deviations: 30376694131.488007
[2025-10-13 08:43:28] 2025-10-13 12:42:20,645 | INFO     | sum of deviations: -56835418528.2928
[2025-10-13 08:43:28] 2025-10-13 12:42:20,646 | INFO     | mean x: 1760344883.4381778
[2025-10-13 08:43:28] 2025-10-13 12:42:20,646 | INFO     | mean y: 2321227.9370932756
[2025-10-13 08:43:28] 2025-10-13 12:42:20,646 | INFO     | -- intersect: 3295962654.857129
[2025-10-13 08:43:28] 2025-10-13 12:42:20,646 | INFO     | intersect: 3295962654.857129
[2025-10-13 08:43:28] 2025-10-13 12:42:20,647 | INFO     | chi2: 0.5101952631429761
[2025-10-13 08:43:28] 2025-10-13 12:42:20,647 | INFO     | -- intersect: 3295962654.857129
[2025-10-13 08:43:28] 2025-10-13 12:42:20,647 | INFO     | current memory leak: -1.87 B/s (using 461 data points, chi2=0.51)
[2025-10-13 08:43:28] 2025-10-13 12:42:20,649 | INFO     | could have reported an average CPU frequency of 2764 MHz (20 samples)
[2025-10-13 08:43:28] 2025-10-13 12:42:20,649 | INFO     | ..............................
[2025-10-13 08:43:28] 2025-10-13 12:42:20,650 | INFO     | . Timing measurements:
[2025-10-13 08:43:28] 2025-10-13 12:42:20,650 | INFO     | . get job = 0 s
[2025-10-13 08:43:28] 2025-10-13 12:42:20,650 | INFO     | . initial setup = 13 s
[2025-10-13 08:43:28] 2025-10-13 12:42:20,650 | INFO     | . payload setup = 58 s
[2025-10-13 08:43:28] 2025-10-13 12:42:20,650 | INFO     | . stage-in = 0 s
[2025-10-13 08:43:28] 2025-10-13 12:42:20,650 | INFO     | . payload execution = 30336 s
[2025-10-13 08:43:28] 2025-10-13 12:42:20,650 | INFO     | . stage-out = 3 s
[2025-10-13 08:43:28] 2025-10-13 12:42:20,650 | INFO     | . log creation = 0 s
[2025-10-13 08:43:28] 2025-10-13 12:42:20,650 | INFO     | ..............................
[2025-10-13 08:43:28] 2025-10-13 12:42:20,991 | INFO     | 
[2025-10-13 08:43:28] 2025-10-13 12:42:20,992 | INFO     | job summary report
[2025-10-13 08:43:28] 2025-10-13 12:42:20,992 | INFO     | --------------------------------------------------
[2025-10-13 08:43:28] 2025-10-13 12:42:20,992 | INFO     | PanDA job id: 6840850876
[2025-10-13 08:43:28] 2025-10-13 12:42:20,992 | INFO     | task id: 46676269
[2025-10-13 08:43:28] 2025-10-13 12:42:20,992 | INFO     | errors: (none)
[2025-10-13 08:43:28] 2025-10-13 12:42:20,992 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:43:28] 2025-10-13 12:42:20,992 | INFO     | pilot state: finished 
[2025-10-13 08:43:28] 2025-10-13 12:42:20,992 | INFO     | transexitcode: 0
[2025-10-13 08:43:28] 2025-10-13 12:42:20,992 | INFO     | exeerrorcode: 0
[2025-10-13 08:43:28] 2025-10-13 12:42:20,992 | INFO     | exeerrordiag: 
[2025-10-13 08:43:28] 2025-10-13 12:42:20,992 | INFO     | exitcode: 0
[2025-10-13 08:43:28] 2025-10-13 12:42:20,992 | INFO     | exitmsg: OK
[2025-10-13 08:43:28] 2025-10-13 12:42:20,992 | INFO     | cpuconsumptiontime: 47561 s
[2025-10-13 08:43:28] 2025-10-13 12:42:20,992 | INFO     | nevents: 400
[2025-10-13 08:43:28] 2025-10-13 12:42:20,993 | INFO     | neventsw: 0
[2025-10-13 08:43:28] 2025-10-13 12:42:20,993 | INFO     | pid: 1720682
[2025-10-13 08:43:28] 2025-10-13 12:42:20,993 | INFO     | pgrp: 1720682
[2025-10-13 08:43:28] 2025-10-13 12:42:20,993 | INFO     | corecount: 9
[2025-10-13 08:43:28] 2025-10-13 12:42:20,993 | INFO     | event service: False
[2025-10-13 08:43:28] 2025-10-13 12:42:20,993 | INFO     | sizes: {0: 2348685, 1: 2348713, 2: 2348884, 15: 2348912, 27: 2348940, 38: 2348968, 51: 2349124, 57: 2349414, 62: 2349442, 30399: 2387609, 30404: 2396607, 30406: 23
[2025-10-13 08:43:28] 2025-10-13 12:42:20,993 | INFO     | --------------------------------------------------
[2025-10-13 08:43:28] 2025-10-13 12:42:20,993 | INFO     | 
[2025-10-13 08:43:28] 2025-10-13 12:42:20,993 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-13 08:43:28] 2025-10-13 12:42:21,085 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:43:28] 2025-10-13 12:42:21,085 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:43:28] 2025-10-13 12:42:21,085 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:43:28] 2025-10-13 12:42:21,085 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:43:28] 2025-10-13 12:42:21,085 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:43:28] 2025-10-13 12:42:21,085 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:43:28] 2025-10-13 12:42:21,086 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:43:28] 2025-10-13 12:42:21,086 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:43:28] 2025-10-13 12:42:21,086 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:43:28] 2025-10-13 12:42:21,086 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:43:28] 2025-10-13 12:42:21,086 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:43:28] 2025-10-13 12:42:21,086 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:43:28] 2025-10-13 12:42:21,086 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:43:28] 2025-10-13 12:42:21,086 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:43:28] 2025-10-13 12:42:21,086 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:43:28] 2025-10-13 12:42:21,086 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:43:28] 2025-10-13 12:42:21,086 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:43:28] 2025-10-13 12:42:21,086 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:43:28] 2025-10-13 12:42:21,086 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:43:28] 2025-10-13 12:42:21,086 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:43:28] 2025-10-13 12:42:21,087 | INFO     | job 6840850876 has completed (purged errors)
[2025-10-13 08:43:28] 2025-10-13 12:42:21,087 | INFO     | overall cleanup function is called
[2025-10-13 08:43:28] 2025-10-13 12:42:22,101 | INFO     | --- collectZombieJob: --- 10, [1720682]
[2025-10-13 08:43:28] 2025-10-13 12:42:22,102 | INFO     | zombie collector waiting for pid 1720682
[2025-10-13 08:43:28] 2025-10-13 12:42:22,102 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:43:28] 2025-10-13 12:42:22,102 | INFO     | collected zombie processes
[2025-10-13 08:43:28] 2025-10-13 12:42:22,102 | INFO     | will attempt to kill all subprocesses of pid=1720682
[2025-10-13 08:43:28] 2025-10-13 12:42:22,562 | INFO     | process IDs to be killed: [1720682] (in reverse order)
[2025-10-13 08:43:28] 2025-10-13 12:42:22,819 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:43:28] 2025-10-13 12:42:22,820 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:43:28] 2025-10-13 12:42:22,849 | INFO     | did not find any defunct processes belonging to 1720682
[2025-10-13 08:43:28] 2025-10-13 12:42:22,875 | INFO     | did not find any defunct processes belonging to 1720682
[2025-10-13 08:43:28] 2025-10-13 12:42:22,875 | INFO     | ready for new job
[2025-10-13 08:43:28] 2025-10-13 12:42:22,880 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:43:28] 2025-10-13 12:42:22,883 | INFO     | ***************************************
[2025-10-13 08:43:28] 2025-10-13 12:42:22,883 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:43:28] 2025-10-13 12:42:22,883 | INFO     | ***************************************
[2025-10-13 08:43:28] 2025-10-13 12:42:22,884 | INFO     | 
[2025-10-13 08:43:28] 2025-10-13 12:42:22,900 | INFO     | architecture information:
[2025-10-13 08:43:28] 2025-10-13 12:42:22,905 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:43:28] 2025-10-13 12:42:22,982 | INFO     | cat /etc/os-release:
[2025-10-13 08:43:28] NAME="CentOS Linux"
[2025-10-13 08:43:28] VERSION="7 (Core)"
[2025-10-13 08:43:28] ID="centos"
[2025-10-13 08:43:28] ID_LIKE="rhel fedora"
[2025-10-13 08:43:28] VERSION_ID="7"
[2025-10-13 08:43:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:43:28] ANSI_COLOR="0;31"
[2025-10-13 08:43:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:43:28] HOME_URL="https://www.centos.org/"
[2025-10-13 08:43:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:43:28] 
[2025-10-13 08:43:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:43:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:43:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:43:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:43:28] 
[2025-10-13 08:43:28] 2025-10-13 12:42:22,982 | INFO     | ***************************************
[2025-10-13 08:43:28] 2025-10-13 12:42:23,486 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-13 08:43:28] 2025-10-13 12:42:23,638 | INFO     | sufficient remaining disk space (75325505536 B)
[2025-10-13 08:43:28] 2025-10-13 12:42:23,638 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:43:28] 2025-10-13 12:42:23,639 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:43:28] 2025-10-13 12:42:23,639 | INFO     | update_server=False
[2025-10-13 08:43:28] 2025-10-13 12:42:23,639 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:43:28] 2025-10-13 12:42:23,639 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:43:28] 2025-10-13 12:42:24,243 | INFO     | all payload control threads have been joined
[2025-10-13 08:43:28] 2025-10-13 12:42:24,251 | INFO     | all data control threads have been joined
[2025-10-13 08:43:28] 2025-10-13 12:42:24,466 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:43:28] 2025-10-13 12:42:24,467 | INFO     | aborting loop
[2025-10-13 08:43:28] 2025-10-13 12:42:24,645 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:43:28] 2025-10-13 12:42:24,663 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:43:28] 2025-10-13 12:42:24,668 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:43:28] 2025-10-13 12:42:24,968 | INFO     | all job control threads have been joined
[2025-10-13 08:43:28] 2025-10-13 12:42:24,980 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:43:28] 2025-10-13 12:42:25,164 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:43:28] 2025-10-13 12:42:25,250 | INFO     | [payload] control thread has finished
[2025-10-13 08:43:28] 2025-10-13 12:42:25,256 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:43:28] 2025-10-13 12:42:25,258 | INFO     | [data] control thread has finished
[2025-10-13 08:43:28] 2025-10-13 12:42:25,431 | INFO     | [job] validate thread has finished
[2025-10-13 08:43:28] 2025-10-13 12:42:25,473 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:43:28] 2025-10-13 12:42:25,647 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:43:28] 2025-10-13 12:42:25,806 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:43:28] 2025-10-13 12:42:25,887 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:43:28] 2025-10-13 12:42:25,910 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:43:28] 2025-10-13 12:42:25,979 | INFO     | [job] control thread has finished
[2025-10-13 08:43:28] 2025-10-13 12:42:26,189 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:43:28] 2025-10-13 12:42:26,813 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:43:28] 2025-10-13 12:42:28,988 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:43:28] 2025-10-13 12:42:53,869 | INFO     | PID=1707147 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 08:43:28] 2025-10-13 12:42:53,870 | INFO     | .. there are 26 such processes running
[2025-10-13 08:43:28] 2025-10-13 12:42:53,870 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:43:28] 2025-10-13 12:42:53,870 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:43:28] 2025-10-13 12:42:53,870 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:43:28] 2025-10-13 12:43:12,491 [wrapper] supervise_pilot (15 min periods counter: 35)
[2025-10-13 08:43:28] 2025-10-13 12:43:22,035 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:43:28] 2025-10-13 12:43:22,998 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139885043574592)>', '<ExcThread(monitor, started 139884685661952)>']
[2025-10-13 08:43:28] 2025-10-13 12:43:23,060 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:43:28] 2025-10-13 12:43:23,061 | INFO     | [monitor] control thread has ended
[2025-10-13 08:43:28] 2025-10-13 12:43:28,023 | INFO     | all workflow threads have been joined
[2025-10-13 08:43:28] 2025-10-13 12:43:28,025 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:43:28] 2025-10-13 12:43:28,025 | INFO     | traces error code: 0
[2025-10-13 08:43:28] 2025-10-13 12:43:28,026 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:43:28] 2025-10-13 12:43:28,244 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:43:28] 2025-10-13 12:43:28,250 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:43:28] 2025-10-13 12:43:28,254 [wrapper] pilotpid: 1707147
[2025-10-13 08:43:28] 2025-10-13 12:43:28,258 [wrapper] Pilot exit status: 0
[2025-10-13 08:43:28] 2025-10-13 12:43:28,297 [wrapper] pandaids: 6840850876
[2025-10-13 08:43:28] 2025-10-13 12:43:28,409 [wrapper] cleanup supervisor_pilot 3246170 1707148
[2025-10-13 08:43:28] 2025-10-13 12:43:28,413 [wrapper] Test setup, not cleaning
[2025-10-13 08:43:28] 2025-10-13 12:43:28,416 [wrapper] apfmon messages muted
[2025-10-13 08:43:28] 2025-10-13 12:43:28,419 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:43:28] 2025-10-13 12:43:28,422 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:43:28]  *** Error codes and diagnostics ***
[2025-10-13 08:43:28]     "exeErrorCode": 0,
[2025-10-13 08:43:28]     "exeErrorDiag": "",
[2025-10-13 08:43:28]     "pilotErrorCode": 0,
[2025-10-13 08:43:28]     "pilotErrorDiag": "",
[2025-10-13 08:43:28]  *** Listing of results directory ***
[2025-10-13 08:43:28] total 431456
[2025-10-13 08:43:28] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:57 pilot3.tar.gz
[2025-10-13 08:43:28] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 18:12 queuedata.json
[2025-10-13 08:43:28] -rwx------. 1 boincer umatlas     36292 Oct 12 18:12 runpilot2-wrapper.sh
[2025-10-13 08:43:28] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:43:28] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:11 run_atlas
[2025-10-13 08:43:28] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:11 job.xml
[2025-10-13 08:43:28] -rw-r--r--. 2 boincer umatlas 222491257 Oct 13 00:11 EVNT.46676267._004335.pool.root.1
[2025-10-13 08:43:28] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:11 start_atlas.sh
[2025-10-13 08:43:28] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:11 shared
[2025-10-13 08:43:28] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 00:11 input.tar.gz
[2025-10-13 08:43:28] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:11 boinc_lockfile
[2025-10-13 08:43:28] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 00:11 pandaJob.out
[2025-10-13 08:43:28] -rw-------. 1 boincer umatlas    974373 Oct 13 00:13 agis_schedconf.cvmfs.json
[2025-10-13 08:43:28] drwx------. 5 boincer umatlas      4096 Oct 13 00:13 pilot3
[2025-10-13 08:43:28] -rw-r--r--. 1 boincer umatlas      6843 Oct 13 08:38 init_data.xml
[2025-10-13 08:43:28] -rw-------. 1 boincer umatlas 206364826 Oct 13 08:41 HITS.46676269._090824.pool.root.1
[2025-10-13 08:43:28] -rw-r--r--. 1 boincer umatlas       531 Oct 13 08:41 boinc_task_state.xml
[2025-10-13 08:43:28] -rw-------. 1 boincer umatlas      1043 Oct 13 08:41 memory_monitor_summary.json
[2025-10-13 08:43:28] -rw-------. 1 boincer umatlas        95 Oct 13 08:41 pilot_heartbeat.json
[2025-10-13 08:43:28] -rw-------. 1 boincer umatlas   1560580 Oct 13 08:41 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:43:28] -rw-------. 1 boincer umatlas    697495 Oct 13 08:41 log.46676269._090824.job.log.tgz.1
[2025-10-13 08:43:28] -rw-------. 1 boincer umatlas      7830 Oct 13 08:42 heartbeat.json
[2025-10-13 08:43:28] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 08:43 boinc_mmap_file
[2025-10-13 08:43:28] -rw-r--r--. 1 boincer umatlas        28 Oct 13 08:43 wrapper_checkpoint.txt
[2025-10-13 08:43:28] -rw-------. 1 boincer umatlas      4824 Oct 13 08:43 pilotlog.txt
[2025-10-13 08:43:28] -rw-------. 1 boincer umatlas   3828948 Oct 13 08:43 log.46676269._090824.job.log.1
[2025-10-13 08:43:28] -rw-------. 1 boincer umatlas       357 Oct 13 08:43 output.list
[2025-10-13 08:43:28] -rw-r--r--. 1 boincer umatlas       620 Oct 13 08:43 runtime_log
[2025-10-13 08:43:28] -rw-------. 1 boincer umatlas   4546560 Oct 13 08:43 result.tar.gz
[2025-10-13 08:43:28] -rw-r--r--. 1 boincer umatlas      8709 Oct 13 08:43 runtime_log.err
[2025-10-13 08:43:28] -rw-------. 1 boincer umatlas       659 Oct 13 08:43 9KKODmjTJS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmB9UMDmsvYVCn.diag
[2025-10-13 08:43:28] -rw-r--r--. 1 boincer umatlas     21021 Oct 13 08:43 stderr.txt
[2025-10-13 08:43:28] HITS file was successfully produced:
[2025-10-13 08:43:28] -rw-------. 1 boincer umatlas 206364826 Oct 13 08:41 shared/HITS.pool.root.1
[2025-10-13 08:43:28]  *** Contents of shared directory: ***
[2025-10-13 08:43:28] total 423832
[2025-10-13 08:43:28] -rw-r--r--. 2 boincer umatlas 222491257 Oct 13 00:11 ATLAS.root_0
[2025-10-13 08:43:28] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:11 start_atlas.sh
[2025-10-13 08:43:28] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 00:11 input.tar.gz
[2025-10-13 08:43:28] -rw-------. 1 boincer umatlas 206364826 Oct 13 08:41 HITS.pool.root.1
[2025-10-13 08:43:28] -rw-------. 1 boincer umatlas   4546560 Oct 13 08:43 result.tar.gz
08:43:51 (1701715): run_atlas exited; CPU time 48492.477610
08:43:51 (1701715): called boinc_finish(0)

</stderr_txt>
]]>

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