Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:35:53 (203540): wrapper (7.7.26015): starting
08:35:53 (203540): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 08:35:53] Arguments: --nthreads 8
[2025-10-13 08:35:53] Threads: 8
[2025-10-13 08:35:53] Checking for CVMFS
[2025-10-13 08:35:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 08:35:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 08:35:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 08:35:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 08:35:54] 2.13.2.0 5698 6928 202556 151661 3 133 24320564 32935937 13726 16776704 0 17888744 99.675 14418434 27433 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 08:35:54] CVMFS is ok
[2025-10-13 08:35:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 08:35:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 08:35:54] Further information can be found at the LHC@home message board.
[2025-10-13 08:35:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 08:35:54] Checking for apptainer binary...
[2025-10-13 08:35:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 08:35:54] Running /usr/bin/apptainer --version
[2025-10-13 08:35:54] apptainer version 1.4.3-1.el9
[2025-10-13 08:35:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 08:35:54] c-6-4.aglt2.org
[2025-10-13 08:35:54] apptainer works
[2025-10-13 08:35:54] Set ATHENA_PROC_NUMBER=8
[2025-10-13 08:35:54] Set ATHENA_CORE_NUMBER=8
[2025-10-13 08:35:55] Starting ATLAS job with PandaID=6831946397
[2025-10-13 08:35:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 14:36:20]  *** The last 200 lines of the pilot log: ***
[2025-10-13 14:36:20] 2025-10-13 18:35:23,073 | INFO     | time since job start (21527s) is within the limit (172800.0s)
[2025-10-13 14:36:20] 2025-10-13 18:35:23,432 | INFO     | monitor loop #1291: job 0:6831946397 is in state 'finished'
[2025-10-13 14:36:20] 2025-10-13 18:35:23,432 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 14:36:20] 2025-10-13 18:35:24,403 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 14:36:20] 2025-10-13 18:35:24,411 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.176050000002
[2025-10-13 14:36:20] 2025-10-13 18:35:24,420 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6831946397/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 14:36:20] 2025-10-13 18:35:24,422 | INFO     | extracted standard info from prmon json
[2025-10-13 14:36:20] 2025-10-13 18:35:24,422 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 14:36:20] 2025-10-13 18:35:24,422 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 14:36:20] 2025-10-13 18:35:24,422 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 14:36:20] 2025-10-13 18:35:24,423 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 14:36:20] 2025-10-13 18:35:24,430 | INFO     | fitting pss+swap vs Time
[2025-10-13 14:36:20] 2025-10-13 18:35:24,431 | INFO     | sum of square deviations: 13295311179.054314
[2025-10-13 14:36:20] 2025-10-13 18:35:24,434 | INFO     | sum of deviations: -48608201018.511444
[2025-10-13 14:36:20] 2025-10-13 18:35:24,434 | INFO     | mean x: 1760369803.3114285
[2025-10-13 14:36:20] 2025-10-13 18:35:24,434 | INFO     | mean y: 2163858.802857143
[2025-10-13 14:36:20] 2025-10-13 18:35:24,434 | INFO     | -- intersect: 6438147801.855312
[2025-10-13 14:36:20] 2025-10-13 18:35:24,434 | INFO     | intersect: 6438147801.855312
[2025-10-13 14:36:20] 2025-10-13 18:35:24,435 | INFO     | chi2: 2.6536967816543293
[2025-10-13 14:36:20] 2025-10-13 18:35:24,436 | INFO     | sum of square deviations: 12733701042.858025
[2025-10-13 14:36:20] 2025-10-13 18:35:24,439 | INFO     | sum of deviations: -50834803856.28698
[2025-10-13 14:36:20] 2025-10-13 18:35:24,439 | INFO     | mean x: 1760369650.8202899
[2025-10-13 14:36:20] 2025-10-13 18:35:24,439 | INFO     | mean y: 2163256.269565217
[2025-10-13 14:36:20] 2025-10-13 18:35:24,439 | INFO     | -- intersect: 7029817322.657528
[2025-10-13 14:36:20] 2025-10-13 18:35:24,439 | INFO     | intersect: 7029817322.657528
[2025-10-13 14:36:20] 2025-10-13 18:35:24,440 | INFO     | chi2: 2.6389682151480245
[2025-10-13 14:36:20] 2025-10-13 18:35:24,440 | INFO     | current chi2=2.6389682151480245 (change=0.5550207019930499 %)
[2025-10-13 14:36:20] 2025-10-13 18:35:24,440 | INFO     | right removable region: 344
[2025-10-13 14:36:20] 2025-10-13 18:35:24,441 | INFO     | sum of square deviations: 12733548908.214478
[2025-10-13 14:36:20] 2025-10-13 18:35:24,444 | INFO     | sum of deviations: -107457313338.07556
[2025-10-13 14:36:20] 2025-10-13 18:35:24,444 | INFO     | mean x: 1760369955.8231883
[2025-10-13 14:36:20] 2025-10-13 18:35:24,444 | INFO     | mean y: 2179768.3594202898
[2025-10-13 14:36:20] 2025-10-13 18:35:24,444 | INFO     | -- intersect: 14857788938.855127
[2025-10-13 14:36:20] 2025-10-13 18:35:24,444 | INFO     | intersect: 14857788938.855127
[2025-10-13 14:36:20] 2025-10-13 18:35:24,445 | INFO     | chi2: 0.8226510889284059
[2025-10-13 14:36:20] 2025-10-13 18:35:24,445 | INFO     | current chi2=0.8226510889284059 (change=68.99980831963927 %)
[2025-10-13 14:36:20] 2025-10-13 18:35:24,446 | INFO     | sum of square deviations: 12187833449.776514
[2025-10-13 14:36:20] 2025-10-13 18:35:24,449 | INFO     | sum of deviations: -106882537901.6353
[2025-10-13 14:36:20] 2025-10-13 18:35:24,449 | INFO     | mean x: 1760370108.335294
[2025-10-13 14:36:20] 2025-10-13 18:35:24,449 | INFO     | mean y: 2179576.9529411765
[2025-10-13 14:36:20] 2025-10-13 18:35:24,449 | INFO     | -- intersect: 15439937698.639698
[2025-10-13 14:36:20] 2025-10-13 18:35:24,449 | INFO     | intersect: 15439937698.639698
[2025-10-13 14:36:20] 2025-10-13 18:35:24,450 | INFO     | chi2: 0.743039843684271
[2025-10-13 14:36:20] 2025-10-13 18:35:24,451 | INFO     | current chi2=0.743039843684271 (change=9.677401065357774 %)
[2025-10-13 14:36:20] 2025-10-13 18:35:24,451 | INFO     | left removable region: 20
[2025-10-13 14:36:20] 2025-10-13 18:35:24,451 | INFO     | sum of square deviations: 10546837791.555634
[2025-10-13 14:36:20] 2025-10-13 18:35:24,454 | INFO     | sum of deviations: -73627021207.92596
[2025-10-13 14:36:20] 2025-10-13 18:35:24,454 | INFO     | mean x: 1760370230.3703704
[2025-10-13 14:36:20] 2025-10-13 18:35:24,455 | INFO     | mean y: 2168557.8827160494
[2025-10-13 14:36:20] 2025-10-13 18:35:24,455 | INFO     | -- intersect: 12291237456.719309
[2025-10-13 14:36:20] 2025-10-13 18:35:24,456 | INFO     | intersect: 12291237456.719309
[2025-10-13 14:36:20] 2025-10-13 18:35:24,456 | INFO     | chi2: 0.5893461727413322
[2025-10-13 14:36:20] 2025-10-13 18:35:24,456 | INFO     | -- intersect: 12291237456.719309
[2025-10-13 14:36:20] 2025-10-13 18:35:24,457 | INFO     | current memory leak: -6.98 B/s (using 324 data points, chi2=0.59)
[2025-10-13 14:36:20] 2025-10-13 18:35:24,457 | INFO     | could have reported an average CPU frequency of 2601 MHz (15 samples)
[2025-10-13 14:36:20] 2025-10-13 18:35:24,457 | INFO     | ..............................
[2025-10-13 14:36:20] 2025-10-13 18:35:24,458 | INFO     | . Timing measurements:
[2025-10-13 14:36:20] 2025-10-13 18:35:24,458 | INFO     | . get job = 1 s
[2025-10-13 14:36:20] 2025-10-13 18:35:24,458 | INFO     | . initial setup = 5 s
[2025-10-13 14:36:20] 2025-10-13 18:35:24,458 | INFO     | . payload setup = 56 s
[2025-10-13 14:36:20] 2025-10-13 18:35:24,458 | INFO     | . stage-in = 0 s
[2025-10-13 14:36:20] 2025-10-13 18:35:24,458 | INFO     | . payload execution = 21362 s
[2025-10-13 14:36:20] 2025-10-13 18:35:24,458 | INFO     | . stage-out = 3 s
[2025-10-13 14:36:20] 2025-10-13 18:35:24,458 | INFO     | . log creation = 0 s
[2025-10-13 14:36:20] 2025-10-13 18:35:24,458 | INFO     | ..............................
[2025-10-13 14:36:20] 2025-10-13 18:35:24,563 | INFO     | 
[2025-10-13 14:36:20] 2025-10-13 18:35:24,564 | INFO     | job summary report
[2025-10-13 14:36:20] 2025-10-13 18:35:24,564 | INFO     | --------------------------------------------------
[2025-10-13 14:36:20] 2025-10-13 18:35:24,564 | INFO     | PanDA job id: 6831946397
[2025-10-13 14:36:20] 2025-10-13 18:35:24,564 | INFO     | task id: 46376905
[2025-10-13 14:36:20] 2025-10-13 18:35:24,564 | INFO     | errors: (none)
[2025-10-13 14:36:20] 2025-10-13 18:35:24,564 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 14:36:20] 2025-10-13 18:35:24,564 | INFO     | pilot state: finished 
[2025-10-13 14:36:20] 2025-10-13 18:35:24,564 | INFO     | transexitcode: 0
[2025-10-13 14:36:20] 2025-10-13 18:35:24,564 | INFO     | exeerrorcode: 0
[2025-10-13 14:36:20] 2025-10-13 18:35:24,564 | INFO     | exeerrordiag: 
[2025-10-13 14:36:20] 2025-10-13 18:35:24,565 | INFO     | exitcode: 0
[2025-10-13 14:36:20] 2025-10-13 18:35:24,565 | INFO     | exitmsg: OK
[2025-10-13 14:36:20] 2025-10-13 18:35:24,565 | INFO     | cpuconsumptiontime: 44519 s
[2025-10-13 14:36:20] 2025-10-13 18:35:24,565 | INFO     | nevents: 400
[2025-10-13 14:36:20] 2025-10-13 18:35:24,565 | INFO     | neventsw: 0
[2025-10-13 14:36:20] 2025-10-13 18:35:24,565 | INFO     | pid: 221246
[2025-10-13 14:36:20] 2025-10-13 18:35:24,565 | INFO     | pgrp: 221246
[2025-10-13 14:36:20] 2025-10-13 18:35:24,565 | INFO     | corecount: 8
[2025-10-13 14:36:20] 2025-10-13 18:35:24,565 | INFO     | event service: False
[2025-10-13 14:36:20] 2025-10-13 18:35:24,565 | INFO     | sizes: {0: 2348645, 1: 2348673, 2: 2348872, 3: 2348872, 13: 2348900, 25: 2348956, 36: 2349402, 47: 2349402, 21423: 2382813, 21429: 2391811, 21432: 2391867, 21456: 
[2025-10-13 14:36:20] 2025-10-13 18:35:24,566 | INFO     | --------------------------------------------------
[2025-10-13 14:36:20] 2025-10-13 18:35:24,566 | INFO     | 
[2025-10-13 14:36:20] 2025-10-13 18:35:24,566 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 14:36:20] 2025-10-13 18:35:24,590 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 14:36:20] 2025-10-13 18:35:24,591 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 14:36:20] 2025-10-13 18:35:24,591 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 14:36:20] 2025-10-13 18:35:24,591 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 14:36:20] 2025-10-13 18:35:24,591 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 14:36:20] 2025-10-13 18:35:24,591 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 14:36:20] 2025-10-13 18:35:24,591 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 14:36:20] 2025-10-13 18:35:24,591 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 14:36:20] 2025-10-13 18:35:24,591 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 14:36:20] 2025-10-13 18:35:24,592 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 14:36:20] 2025-10-13 18:35:24,592 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 14:36:20] 2025-10-13 18:35:24,592 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 14:36:20] 2025-10-13 18:35:24,592 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 14:36:20] 2025-10-13 18:35:24,592 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 14:36:20] 2025-10-13 18:35:24,592 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 14:36:20] 2025-10-13 18:35:24,592 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 14:36:20] 2025-10-13 18:35:24,592 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 14:36:20] 2025-10-13 18:35:24,592 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 14:36:20] 2025-10-13 18:35:24,592 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 14:36:20] 2025-10-13 18:35:24,593 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 14:36:20] 2025-10-13 18:35:24,593 | INFO     | job 6831946397 has completed (purged errors)
[2025-10-13 14:36:20] 2025-10-13 18:35:24,593 | INFO     | overall cleanup function is called
[2025-10-13 14:36:20] 2025-10-13 18:35:25,603 | INFO     | --- collectZombieJob: --- 10, [221246]
[2025-10-13 14:36:20] 2025-10-13 18:35:25,604 | INFO     | zombie collector waiting for pid 221246
[2025-10-13 14:36:20] 2025-10-13 18:35:25,604 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 14:36:20] 2025-10-13 18:35:25,604 | INFO     | collected zombie processes
[2025-10-13 14:36:20] 2025-10-13 18:35:25,604 | INFO     | will attempt to kill all subprocesses of pid=221246
[2025-10-13 14:36:20] 2025-10-13 18:35:26,187 | INFO     | process IDs to be killed: [221246] (in reverse order)
[2025-10-13 14:36:20] 2025-10-13 18:35:26,481 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 14:36:20] 2025-10-13 18:35:26,482 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 14:36:20] 2025-10-13 18:35:26,498 | INFO     | did not find any defunct processes belonging to 221246
[2025-10-13 14:36:20] 2025-10-13 18:35:26,516 | INFO     | did not find any defunct processes belonging to 221246
[2025-10-13 14:36:20] 2025-10-13 18:35:26,516 | INFO     | ready for new job
[2025-10-13 14:36:20] 2025-10-13 18:35:26,516 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 14:36:20] 2025-10-13 18:35:26,526 | INFO     | ***************************************
[2025-10-13 14:36:20] 2025-10-13 18:35:26,531 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-13 14:36:20] 2025-10-13 18:35:26,531 | INFO     | ***************************************
[2025-10-13 14:36:20] 2025-10-13 18:35:26,532 | INFO     | 
[2025-10-13 14:36:20] 2025-10-13 18:35:26,550 | INFO     | architecture information:
[2025-10-13 14:36:20] 2025-10-13 18:35:26,554 | INFO     | executing command: cat /etc/os-release
[2025-10-13 14:36:20] 2025-10-13 18:35:26,666 | INFO     | cat /etc/os-release:
[2025-10-13 14:36:20] NAME="CentOS Linux"
[2025-10-13 14:36:20] VERSION="7 (Core)"
[2025-10-13 14:36:20] ID="centos"
[2025-10-13 14:36:20] ID_LIKE="rhel fedora"
[2025-10-13 14:36:20] VERSION_ID="7"
[2025-10-13 14:36:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 14:36:20] ANSI_COLOR="0;31"
[2025-10-13 14:36:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 14:36:20] HOME_URL="https://www.centos.org/"
[2025-10-13 14:36:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 14:36:20] 
[2025-10-13 14:36:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 14:36:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 14:36:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 14:36:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 14:36:20] 
[2025-10-13 14:36:20] 2025-10-13 18:35:26,666 | INFO     | ***************************************
[2025-10-13 14:36:20] 2025-10-13 18:35:27,179 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 14:36:20] 2025-10-13 18:35:27,280 | INFO     | sufficient remaining disk space (76362547200 B)
[2025-10-13 14:36:20] 2025-10-13 18:35:27,281 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 14:36:20] 2025-10-13 18:35:27,281 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 14:36:20] 2025-10-13 18:35:27,281 | INFO     | update_server=False
[2025-10-13 14:36:20] 2025-10-13 18:35:27,282 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 14:36:20] 2025-10-13 18:35:27,283 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:36:20] 2025-10-13 18:35:27,283 | INFO     | aborting loop
[2025-10-13 14:36:20] 2025-10-13 18:35:27,461 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 14:36:20] 2025-10-13 18:35:27,524 | INFO     | all job control threads have been joined
[2025-10-13 14:36:20] 2025-10-13 18:35:27,706 | INFO     | all payload control threads have been joined
[2025-10-13 14:36:20] 2025-10-13 18:35:28,288 | INFO     | [job] retrieve thread has finished
[2025-10-13 14:36:20] 2025-10-13 18:35:28,293 | INFO     | [job] job monitor thread has finished
[2025-10-13 14:36:20] 2025-10-13 18:35:28,370 | INFO     | all data control threads have been joined
[2025-10-13 14:36:20] 2025-10-13 18:35:28,405 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 14:36:20] 2025-10-13 18:35:28,530 | INFO     | [job] control thread has finished
[2025-10-13 14:36:20] 2025-10-13 18:35:28,713 | INFO     | [payload] control thread has finished
[2025-10-13 14:36:20] 2025-10-13 18:35:28,872 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 14:36:20] 2025-10-13 18:35:28,902 | INFO     | [payload] failed_post thread has finished
[2025-10-13 14:36:20] 2025-10-13 18:35:29,372 | INFO     | [data] copytool_in thread has finished
[2025-10-13 14:36:20] 2025-10-13 18:35:29,377 | INFO     | [data] control thread has finished
[2025-10-13 14:36:20] 2025-10-13 18:35:29,379 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 14:36:20] 2025-10-13 18:35:29,464 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 14:36:20] 2025-10-13 18:35:29,468 | INFO     | [data] copytool_out thread has finished
[2025-10-13 14:36:20] 2025-10-13 18:35:29,583 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 14:36:20] 2025-10-13 18:35:29,588 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 14:36:20] 2025-10-13 18:35:29,662 | INFO     | [job] validate thread has finished
[2025-10-13 14:36:20] 2025-10-13 18:35:29,737 | INFO     | [payload] validate_post thread has finished
[2025-10-13 14:36:20] 2025-10-13 18:35:30,591 | INFO     | [job] queue monitor thread has finished
[2025-10-13 14:36:20] 2025-10-13 18:35:32,883 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 14:36:20] 2025-10-13 18:35:56,709 | INFO     | PID=207850 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 14:36:20] 2025-10-13 18:35:56,709 | INFO     | .. there are 17 such processes running
[2025-10-13 14:36:20] 2025-10-13 18:35:56,711 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 14:36:20] 2025-10-13 18:35:56,711 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 14:36:20] 2025-10-13 18:35:56,711 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 14:36:20] 2025-10-13 18:36:14,503 | INFO     | [monitor] cgroup control has ended
[2025-10-13 14:36:20] 2025-10-13 18:36:14,852 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139898366248768)>', '<ExcThread(monitor, started 139897721566976)>']
[2025-10-13 14:36:20] 2025-10-13 18:36:15,831 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 14:36:20] 2025-10-13 18:36:15,832 | INFO     | [monitor] control thread has ended
[2025-10-13 14:36:20] 2025-10-13 18:36:19,877 | INFO     | all workflow threads have been joined
[2025-10-13 14:36:20] 2025-10-13 18:36:19,881 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 14:36:20] 2025-10-13 18:36:19,881 | INFO     | traces error code: 0
[2025-10-13 14:36:20] 2025-10-13 18:36:19,882 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 14:36:20] 2025-10-13 18:36:20,098 [wrapper] ==== pilot stdout END ====
[2025-10-13 14:36:20] 2025-10-13 18:36:20,105 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 14:36:20] 2025-10-13 18:36:20,110 [wrapper] pilotpid: 207850
[2025-10-13 14:36:20] 2025-10-13 18:36:20,132 [wrapper] Pilot exit status: 0
[2025-10-13 14:36:20] 2025-10-13 18:36:20,253 [wrapper] pandaids: 6831946397
[2025-10-13 14:36:20] 2025-10-13 18:36:20,419 [wrapper] cleanup supervisor_pilot  975177 207851
[2025-10-13 14:36:20] 2025-10-13 18:36:20,438 [wrapper] Test setup, not cleaning
[2025-10-13 14:36:20] 2025-10-13 18:36:20,443 [wrapper] apfmon messages muted
[2025-10-13 14:36:20] 2025-10-13 18:36:20,447 [wrapper] ==== wrapper stdout END ====
[2025-10-13 14:36:20] 2025-10-13 18:36:20,450 [wrapper] ==== wrapper stderr END ====
[2025-10-13 14:36:20]  *** Error codes and diagnostics ***
[2025-10-13 14:36:20]     "exeErrorCode": 0,
[2025-10-13 14:36:20]     "exeErrorDiag": "",
[2025-10-13 14:36:20]     "pilotErrorCode": 0,
[2025-10-13 14:36:20]     "pilotErrorDiag": "",
[2025-10-13 14:36:20]  *** Listing of results directory ***
[2025-10-13 14:36:20] total 385744
[2025-10-13 14:36:20] -rw-r--r--. 1 boincer umatlas    552446 Oct  5 15:35 pilot3.tar.gz
[2025-10-13 14:36:20] -rw-r--r--. 1 boincer umatlas      5112 Oct  5 15:44 queuedata.json
[2025-10-13 14:36:20] -rwx------. 1 boincer umatlas     36292 Oct  5 15:45 runpilot2-wrapper.sh
[2025-10-13 14:36:20] -rw-r--r--. 1 boincer umatlas       100 Oct 13 08:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 14:36:20] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 08:35 run_atlas
[2025-10-13 14:36:20] -rw-r--r--. 1 boincer umatlas       105 Oct 13 08:35 job.xml
[2025-10-13 14:36:20] -rw-r--r--. 2 boincer umatlas 212424901 Oct 13 08:35 EVNT.46376901._003472.pool.root.1
[2025-10-13 14:36:20] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 08:35 start_atlas.sh
[2025-10-13 14:36:20] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 08:35 shared
[2025-10-13 14:36:20] -rw-r--r--. 2 boincer umatlas    565602 Oct 13 08:35 input.tar.gz
[2025-10-13 14:36:20] -rw-r--r--. 1 boincer umatlas         0 Oct 13 08:35 boinc_lockfile
[2025-10-13 14:36:20] -rw-r--r--. 1 boincer umatlas      2519 Oct 13 08:35 pandaJob.out
[2025-10-13 14:36:20] -rw-------. 1 boincer umatlas    972497 Oct 13 08:36 agis_schedconf.cvmfs.json
[2025-10-13 14:36:20] drwx------. 4 boincer umatlas      4096 Oct 13 08:36 pilot3
[2025-10-13 14:36:20] -rw-r--r--. 1 boincer umatlas      6655 Oct 13 14:30 init_data.xml
[2025-10-13 14:36:20] -rw-------. 1 boincer umatlas 172353273 Oct 13 14:34 HITS.46376905._094238.pool.root.1
[2025-10-13 14:36:20] -rw-r--r--. 1 boincer umatlas       531 Oct 13 14:34 boinc_task_state.xml
[2025-10-13 14:36:20] -rw-------. 1 boincer umatlas      1040 Oct 13 14:34 memory_monitor_summary.json
[2025-10-13 14:36:20] -rw-------. 1 boincer umatlas   1560580 Oct 13 14:34 agis_ddmendpoints.agis.ALL.json
[2025-10-13 14:36:20] -rw-------. 1 boincer umatlas    547789 Oct 13 14:34 log.46376905._094238.job.log.tgz.1
[2025-10-13 14:36:20] -rw-------. 1 boincer umatlas      7823 Oct 13 14:35 heartbeat.json
[2025-10-13 14:36:20] -rw-------. 1 boincer umatlas        95 Oct 13 14:35 pilot_heartbeat.json
[2025-10-13 14:36:20] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 14:36 boinc_mmap_file
[2025-10-13 14:36:20] -rw-r--r--. 1 boincer umatlas        28 Oct 13 14:36 wrapper_checkpoint.txt
[2025-10-13 14:36:20] -rw-------. 1 boincer umatlas      4823 Oct 13 14:36 pilotlog.txt
[2025-10-13 14:36:20] -rw-------. 1 boincer umatlas   2619740 Oct 13 14:36 log.46376905._094238.job.log.1
[2025-10-13 14:36:20] -rw-------. 1 boincer umatlas       357 Oct 13 14:36 output.list
[2025-10-13 14:36:20] -rw-r--r--. 1 boincer umatlas       620 Oct 13 14:36 runtime_log
[2025-10-13 14:36:20] -rw-------. 1 boincer umatlas   3184640 Oct 13 14:36 result.tar.gz
[2025-10-13 14:36:20] -rw-r--r--. 1 boincer umatlas      8689 Oct 13 14:36 runtime_log.err
[2025-10-13 14:36:20] -rw-------. 1 boincer umatlas       654 Oct 13 14:36 4qGKDmmqjP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmtLHMDmje23Jo.diag
[2025-10-13 14:36:20] -rw-r--r--. 1 boincer umatlas     21237 Oct 13 14:36 stderr.txt
[2025-10-13 14:36:20] HITS file was successfully produced:
[2025-10-13 14:36:21] -rw-------. 1 boincer umatlas 172353273 Oct 13 14:34 shared/HITS.pool.root.1
[2025-10-13 14:36:21]  *** Contents of shared directory: ***
[2025-10-13 14:36:21] total 379456
[2025-10-13 14:36:21] -rw-r--r--. 2 boincer umatlas 212424901 Oct 13 08:35 ATLAS.root_0
[2025-10-13 14:36:21] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 08:35 start_atlas.sh
[2025-10-13 14:36:21] -rw-r--r--. 2 boincer umatlas    565602 Oct 13 08:35 input.tar.gz
[2025-10-13 14:36:21] -rw-------. 1 boincer umatlas 172353273 Oct 13 14:34 HITS.pool.root.1
[2025-10-13 14:36:21] -rw-------. 1 boincer umatlas   3184640 Oct 13 14:36 result.tar.gz
14:36:22 (203540): run_atlas exited; CPU time 45064.103020
14:36:22 (203540): called boinc_finish(0)

</stderr_txt>
]]>

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