Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:27 (3010381): wrapper (7.7.26015): starting
00:01:27 (3010381): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 00:01:27] Arguments: --nthreads 9
[2025-10-13 00:01:27] Threads: 9
[2025-10-13 00:01:27] Checking for CVMFS
[2025-10-13 00:01:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:01:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:01:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:01:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:01:29] 2.13.2.0 5698 6414 215836 151647 1 269 19868730 32935937 22087 16776704 0 16897393 99.668 13320930 27036 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:01:29] CVMFS is ok
[2025-10-13 00:01:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:01:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:01:29] Further information can be found at the LHC@home message board.
[2025-10-13 00:01:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:01:29] Checking for apptainer binary...
[2025-10-13 00:01:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:01:29] Running /usr/bin/apptainer --version
[2025-10-13 00:01:29] apptainer version 1.4.3-1.el9
[2025-10-13 00:01:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:01:29] c-6-4.aglt2.org
[2025-10-13 00:01:29] apptainer works
[2025-10-13 00:01:29] Set ATHENA_PROC_NUMBER=9
[2025-10-13 00:01:29] Set ATHENA_CORE_NUMBER=9
[2025-10-13 00:01:29] Starting ATLAS job with PandaID=6840854806
[2025-10-13 00:01:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:35:28]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:35:29] 2025-10-13 12:34:34,285 | INFO     | PID=3019215 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 08:35:29] 2025-10-13 12:34:34,285 | INFO     | .. there are 18 such processes running
[2025-10-13 08:35:29] 2025-10-13 12:34:35,287 | INFO     | time since job start (30737s) is within the limit (172800.0s)
[2025-10-13 08:35:29] 2025-10-13 12:34:35,857 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 08:35:29] 2025-10-13 12:34:35,873 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1760000000017
[2025-10-13 08:35:29] 2025-10-13 12:34:35,882 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6840854806/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 08:35:29] 2025-10-13 12:34:35,886 | INFO     | extracted standard info from prmon json
[2025-10-13 08:35:29] 2025-10-13 12:34:35,886 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 08:35:29] 2025-10-13 12:34:35,886 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 08:35:29] 2025-10-13 12:34:35,887 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 08:35:29] 2025-10-13 12:34:35,887 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 08:35:29] 2025-10-13 12:34:35,897 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:35:29] 2025-10-13 12:34:35,898 | INFO     | sum of square deviations: 39225593943.141304
[2025-10-13 08:35:29] 2025-10-13 12:34:35,904 | INFO     | sum of deviations: 178890148681.07562
[2025-10-13 08:35:29] 2025-10-13 12:34:35,904 | INFO     | mean x: 1760343519.691235
[2025-10-13 08:35:29] 2025-10-13 12:34:35,905 | INFO     | mean y: 2107172.426294821
[2025-10-13 08:35:29] 2025-10-13 12:34:35,905 | INFO     | -- intersect: -8026021462.76536
[2025-10-13 08:35:29] 2025-10-13 12:34:35,905 | INFO     | intersect: -8026021462.76536
[2025-10-13 08:35:29] 2025-10-13 12:34:35,906 | INFO     | chi2: 3.5137196873817778
[2025-10-13 08:35:29] 2025-10-13 12:34:35,906 | INFO     | sum of square deviations: 38065280148.47508
[2025-10-13 08:35:29] 2025-10-13 12:34:35,913 | INFO     | sum of deviations: 210195314584.453
[2025-10-13 08:35:29] 2025-10-13 12:34:35,913 | INFO     | mean x: 1760343367.2032194
[2025-10-13 08:35:29] 2025-10-13 12:34:35,913 | INFO     | mean y: 2111255.342052314
[2025-10-13 08:35:29] 2025-10-13 12:34:35,913 | INFO     | -- intersect: -9718451062.935251
[2025-10-13 08:35:29] 2025-10-13 12:34:35,914 | INFO     | intersect: -9718451062.935251
[2025-10-13 08:35:29] 2025-10-13 12:34:35,914 | INFO     | chi2: 2.683034133454109
[2025-10-13 08:35:29] 2025-10-13 12:34:35,915 | INFO     | current chi2=2.683034133454109 (change=23.641201570824457 %)
[2025-10-13 08:35:29] 2025-10-13 12:34:35,915 | INFO     | right removable region: 496
[2025-10-13 08:35:29] 2025-10-13 12:34:35,916 | INFO     | sum of square deviations: 38064915368.475105
[2025-10-13 08:35:29] 2025-10-13 12:34:35,922 | INFO     | sum of deviations: 81977534680.96378
[2025-10-13 08:35:29] 2025-10-13 12:34:35,922 | INFO     | mean x: 1760343672.2032194
[2025-10-13 08:35:29] 2025-10-13 12:34:35,922 | INFO     | mean y: 2119877.7726358147
[2025-10-13 08:35:29] 2025-10-13 12:34:35,922 | INFO     | -- intersect: -3788999399.428468
[2025-10-13 08:35:29] 2025-10-13 12:34:35,922 | INFO     | intersect: -3788999399.428468
[2025-10-13 08:35:29] 2025-10-13 12:34:35,923 | INFO     | chi2: 1.3958924417302816
[2025-10-13 08:35:29] 2025-10-13 12:34:35,923 | INFO     | current chi2=1.3958924417302816 (change=60.273084767031584 %)
[2025-10-13 08:35:29] 2025-10-13 12:34:35,924 | INFO     | sum of square deviations: 36927383580.59137
[2025-10-13 08:35:29] 2025-10-13 12:34:35,930 | INFO     | sum of deviations: 51072893321.2865
[2025-10-13 08:35:29] 2025-10-13 12:34:35,930 | INFO     | mean x: 1760343824.7134147
[2025-10-13 08:35:29] 2025-10-13 12:34:35,930 | INFO     | mean y: 2124007.3353658537
[2025-10-13 08:35:29] 2025-10-13 12:34:35,931 | INFO     | -- intersect: -2432542184.8187737
[2025-10-13 08:35:29] 2025-10-13 12:34:35,931 | INFO     | intersect: -2432542184.8187737
[2025-10-13 08:35:29] 2025-10-13 12:34:35,932 | INFO     | chi2: 1.1627394745858313
[2025-10-13 08:35:29] 2025-10-13 12:34:35,932 | INFO     | current chi2=1.1627394745858313 (change=16.70278885208699 %)
[2025-10-13 08:35:29] 2025-10-13 12:34:35,932 | INFO     | left removable region: 20
[2025-10-13 08:35:29] 2025-10-13 12:34:35,933 | INFO     | sum of square deviations: 33440288850.74808
[2025-10-13 08:35:29] 2025-10-13 12:34:35,938 | INFO     | sum of deviations: 68333790366.2605
[2025-10-13 08:35:29] 2025-10-13 12:34:35,939 | INFO     | mean x: 1760343946.752101
[2025-10-13 08:35:29] 2025-10-13 12:34:35,939 | INFO     | mean y: 2130422.7394957985
[2025-10-13 08:35:29] 2025-10-13 12:34:35,939 | INFO     | -- intersect: -3595056634.0697556
[2025-10-13 08:35:29] 2025-10-13 12:34:35,939 | INFO     | intersect: -3595056634.0697556
[2025-10-13 08:35:29] 2025-10-13 12:34:35,940 | INFO     | chi2: 0.30323837157591066
[2025-10-13 08:35:29] 2025-10-13 12:34:35,940 | INFO     | -- intersect: -3595056634.0697556
[2025-10-13 08:35:29] 2025-10-13 12:34:35,940 | INFO     | current memory leak: 2.04 B/s (using 476 data points, chi2=0.30)
[2025-10-13 08:35:29] 2025-10-13 12:34:35,941 | INFO     | could have reported an average CPU frequency of 2600 MHz (20 samples)
[2025-10-13 08:35:29] 2025-10-13 12:34:35,941 | INFO     | ..............................
[2025-10-13 08:35:29] 2025-10-13 12:34:35,941 | INFO     | . Timing measurements:
[2025-10-13 08:35:29] 2025-10-13 12:34:35,941 | INFO     | . get job = 0 s
[2025-10-13 08:35:29] 2025-10-13 12:34:35,942 | INFO     | . initial setup = 4 s
[2025-10-13 08:35:29] 2025-10-13 12:34:35,942 | INFO     | . payload setup = 30 s
[2025-10-13 08:35:29] 2025-10-13 12:34:35,942 | INFO     | . stage-in = 0 s
[2025-10-13 08:35:29] 2025-10-13 12:34:35,942 | INFO     | . payload execution = 30631 s
[2025-10-13 08:35:29] 2025-10-13 12:34:35,942 | INFO     | . stage-out = 3 s
[2025-10-13 08:35:29] 2025-10-13 12:34:35,942 | INFO     | . log creation = 0 s
[2025-10-13 08:35:29] 2025-10-13 12:34:35,942 | INFO     | ..............................
[2025-10-13 08:35:29] 2025-10-13 12:34:36,685 | INFO     | 
[2025-10-13 08:35:29] 2025-10-13 12:34:36,686 | INFO     | job summary report
[2025-10-13 08:35:29] 2025-10-13 12:34:36,686 | INFO     | --------------------------------------------------
[2025-10-13 08:35:29] 2025-10-13 12:34:36,686 | INFO     | PanDA job id: 6840854806
[2025-10-13 08:35:29] 2025-10-13 12:34:36,686 | INFO     | task id: 46676269
[2025-10-13 08:35:29] 2025-10-13 12:34:36,686 | INFO     | errors: (none)
[2025-10-13 08:35:29] 2025-10-13 12:34:36,686 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:35:29] 2025-10-13 12:34:36,686 | INFO     | pilot state: finished 
[2025-10-13 08:35:29] 2025-10-13 12:34:36,687 | INFO     | transexitcode: 0
[2025-10-13 08:35:29] 2025-10-13 12:34:36,687 | INFO     | exeerrorcode: 0
[2025-10-13 08:35:29] 2025-10-13 12:34:36,687 | INFO     | exeerrordiag: 
[2025-10-13 08:35:29] 2025-10-13 12:34:36,687 | INFO     | exitcode: 0
[2025-10-13 08:35:29] 2025-10-13 12:34:36,687 | INFO     | exitmsg: OK
[2025-10-13 08:35:29] 2025-10-13 12:34:36,687 | INFO     | cpuconsumptiontime: 47194 s
[2025-10-13 08:35:29] 2025-10-13 12:34:36,687 | INFO     | nevents: 400
[2025-10-13 08:35:29] 2025-10-13 12:34:36,687 | INFO     | neventsw: 0
[2025-10-13 08:35:29] 2025-10-13 12:34:36,687 | INFO     | pid: 3036700
[2025-10-13 08:35:29] 2025-10-13 12:34:36,687 | INFO     | pgrp: 3036700
[2025-10-13 08:35:29] 2025-10-13 12:34:36,688 | INFO     | corecount: 9
[2025-10-13 08:35:29] 2025-10-13 12:34:36,688 | INFO     | event service: False
[2025-10-13 08:35:29] 2025-10-13 12:34:36,688 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 21: 2349175, 23: 2349203, 30667: 2387180, 30672: 2396178, 30676: 2396234, 30692: 2396428}
[2025-10-13 08:35:29] 2025-10-13 12:34:36,688 | INFO     | --------------------------------------------------
[2025-10-13 08:35:29] 2025-10-13 12:34:36,688 | INFO     | 
[2025-10-13 08:35:29] 2025-10-13 12:34:36,688 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 08:35:29] 2025-10-13 12:34:36,717 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:35:29] 2025-10-13 12:34:36,717 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:35:29] 2025-10-13 12:34:36,717 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:35:29] 2025-10-13 12:34:36,718 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:35:29] 2025-10-13 12:34:36,718 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:35:29] 2025-10-13 12:34:36,718 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:35:29] 2025-10-13 12:34:36,718 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:35:29] 2025-10-13 12:34:36,718 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:35:29] 2025-10-13 12:34:36,718 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:35:29] 2025-10-13 12:34:36,718 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:35:29] 2025-10-13 12:34:36,718 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:35:29] 2025-10-13 12:34:36,718 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:35:29] 2025-10-13 12:34:36,719 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:35:29] 2025-10-13 12:34:36,719 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:35:29] 2025-10-13 12:34:36,719 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:35:29] 2025-10-13 12:34:36,719 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:35:29] 2025-10-13 12:34:36,719 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:35:29] 2025-10-13 12:34:36,719 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:35:29] 2025-10-13 12:34:36,719 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:35:29] 2025-10-13 12:34:36,719 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:35:29] 2025-10-13 12:34:36,720 | INFO     | job 6840854806 has completed (purged errors)
[2025-10-13 08:35:29] 2025-10-13 12:34:36,720 | INFO     | overall cleanup function is called
[2025-10-13 08:35:29] 2025-10-13 12:34:37,746 | INFO     | --- collectZombieJob: --- 10, [3036700]
[2025-10-13 08:35:29] 2025-10-13 12:34:37,747 | INFO     | zombie collector waiting for pid 3036700
[2025-10-13 08:35:29] 2025-10-13 12:34:37,747 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:35:29] 2025-10-13 12:34:37,747 | INFO     | collected zombie processes
[2025-10-13 08:35:29] 2025-10-13 12:34:37,747 | INFO     | will attempt to kill all subprocesses of pid=3036700
[2025-10-13 08:35:29] 2025-10-13 12:34:38,339 | INFO     | process IDs to be killed: [3036700] (in reverse order)
[2025-10-13 08:35:29] 2025-10-13 12:34:38,457 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:35:29] 2025-10-13 12:34:38,458 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:35:29] 2025-10-13 12:34:38,472 | INFO     | did not find any defunct processes belonging to 3036700
[2025-10-13 08:35:29] 2025-10-13 12:34:38,485 | INFO     | did not find any defunct processes belonging to 3036700
[2025-10-13 08:35:29] 2025-10-13 12:34:38,486 | INFO     | ready for new job
[2025-10-13 08:35:29] 2025-10-13 12:34:38,486 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:35:29] 2025-10-13 12:34:38,489 | INFO     | ***************************************
[2025-10-13 08:35:29] 2025-10-13 12:34:38,489 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:35:29] 2025-10-13 12:34:38,490 | INFO     | ***************************************
[2025-10-13 08:35:29] 2025-10-13 12:34:38,490 | INFO     | 
[2025-10-13 08:35:29] 2025-10-13 12:34:38,492 | INFO     | architecture information:
[2025-10-13 08:35:29] 2025-10-13 12:34:38,492 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:35:29] 2025-10-13 12:34:38,537 | INFO     | cat /etc/os-release:
[2025-10-13 08:35:29] NAME="CentOS Linux"
[2025-10-13 08:35:29] VERSION="7 (Core)"
[2025-10-13 08:35:29] ID="centos"
[2025-10-13 08:35:29] ID_LIKE="rhel fedora"
[2025-10-13 08:35:29] VERSION_ID="7"
[2025-10-13 08:35:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:35:29] ANSI_COLOR="0;31"
[2025-10-13 08:35:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:35:29] HOME_URL="https://www.centos.org/"
[2025-10-13 08:35:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:35:29] 
[2025-10-13 08:35:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:35:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:35:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:35:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:35:29] 
[2025-10-13 08:35:29] 2025-10-13 12:34:38,537 | INFO     | ***************************************
[2025-10-13 08:35:29] 2025-10-13 12:34:39,045 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 08:35:29] 2025-10-13 12:34:39,139 | INFO     | sufficient remaining disk space (75693555712 B)
[2025-10-13 08:35:29] 2025-10-13 12:34:39,140 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:35:29] 2025-10-13 12:34:39,141 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:35:29] 2025-10-13 12:34:39,141 | INFO     | update_server=False
[2025-10-13 08:35:29] 2025-10-13 12:34:39,141 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:35:29] 2025-10-13 12:34:39,601 | INFO     | all payload control threads have been joined
[2025-10-13 08:35:29] 2025-10-13 12:34:39,648 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:35:29] 2025-10-13 12:34:39,768 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:35:29] 2025-10-13 12:34:40,118 | INFO     | all data control threads have been joined
[2025-10-13 08:35:29] 2025-10-13 12:34:40,128 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:35:29] 2025-10-13 12:34:40,129 | INFO     | aborting loop
[2025-10-13 08:35:29] 2025-10-13 12:34:40,147 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:35:29] 2025-10-13 12:34:40,200 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:35:29] 2025-10-13 12:34:40,214 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:35:29] 2025-10-13 12:34:40,311 | INFO     | [job] validate thread has finished
[2025-10-13 08:35:29] 2025-10-13 12:34:40,319 | INFO     | all job control threads have been joined
[2025-10-13 08:35:29] 2025-10-13 12:34:40,325 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:35:29] 2025-10-13 12:34:40,607 | INFO     | [payload] control thread has finished
[2025-10-13 08:35:29] 2025-10-13 12:34:40,635 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:35:29] 2025-10-13 12:34:40,964 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:35:29] 2025-10-13 12:34:41,125 | INFO     | [data] control thread has finished
[2025-10-13 08:35:29] 2025-10-13 12:34:41,136 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:35:29] 2025-10-13 12:34:41,326 | INFO     | [job] control thread has finished
[2025-10-13 08:35:29] 2025-10-13 12:34:41,645 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:35:29] 2025-10-13 12:34:41,702 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:35:29] 2025-10-13 12:34:41,720 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:35:29] 2025-10-13 12:34:41,775 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:35:29] 2025-10-13 12:34:42,721 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:35:29] 2025-10-13 12:34:43,676 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:35:29] 2025-10-13 12:35:12,223 | INFO     | PID=3019215 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 08:35:29] 2025-10-13 12:35:12,224 | INFO     | .. there are 18 such processes running
[2025-10-13 08:35:29] 2025-10-13 12:35:12,225 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:35:29] 2025-10-13 12:35:12,225 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:35:29] 2025-10-13 12:35:12,225 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:35:29] 2025-10-13 12:35:21,507 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:35:29] 2025-10-13 12:35:22,515 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139895923844928)>', '<ExcThread(monitor, started 139895104321280)>']
[2025-10-13 08:35:29] 2025-10-13 12:35:23,300 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:35:29] 2025-10-13 12:35:23,301 | INFO     | [monitor] control thread has ended
[2025-10-13 08:35:29] 2025-10-13 12:35:27,540 | INFO     | all workflow threads have been joined
[2025-10-13 08:35:29] 2025-10-13 12:35:27,541 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:35:29] 2025-10-13 12:35:27,541 | INFO     | traces error code: 0
[2025-10-13 08:35:29] 2025-10-13 12:35:27,541 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:35:29] 2025-10-13 12:35:27,745 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:35:29] 2025-10-13 12:35:27,747 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:35:29] 2025-10-13 12:35:27,750 [wrapper] pilotpid: 3019215
[2025-10-13 08:35:29] 2025-10-13 12:35:27,752 [wrapper] Pilot exit status: 0
[2025-10-13 08:35:29] 2025-10-13 12:35:27,858 [wrapper] pandaids: 6840854806
[2025-10-13 08:35:29] 2025-10-13 12:35:28,029 [wrapper] cleanup supervisor_pilot  194709 3019216
[2025-10-13 08:35:29] 2025-10-13 12:35:28,043 [wrapper] Test setup, not cleaning
[2025-10-13 08:35:29] 2025-10-13 12:35:28,073 [wrapper] apfmon messages muted
[2025-10-13 08:35:29] 2025-10-13 12:35:28,137 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:35:29] 2025-10-13 12:35:28,165 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:35:29]  *** Error codes and diagnostics ***
[2025-10-13 08:35:29]     "exeErrorCode": 0,
[2025-10-13 08:35:29]     "exeErrorDiag": "",
[2025-10-13 08:35:29]     "pilotErrorCode": 0,
[2025-10-13 08:35:29]     "pilotErrorDiag": "",
[2025-10-13 08:35:29]  *** Listing of results directory ***
[2025-10-13 08:35:29] total 412384
[2025-10-13 08:35:29] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 18:57 pilot3.tar.gz
[2025-10-13 08:35:29] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:00 queuedata.json
[2025-10-13 08:35:29] -rwx------. 1 boincer umatlas     36292 Oct 12 19:00 runpilot2-wrapper.sh
[2025-10-13 08:35:29] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:35:29] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:01 run_atlas
[2025-10-13 08:35:29] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:01 job.xml
[2025-10-13 08:35:29] -rw-r--r--. 2 boincer umatlas 219713259 Oct 13 00:01 EVNT.46676267._004641.pool.root.1
[2025-10-13 08:35:29] -rw-r--r--. 2 boincer umatlas    569685 Oct 13 00:01 input.tar.gz
[2025-10-13 08:35:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:01 start_atlas.sh
[2025-10-13 08:35:29] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:01 shared
[2025-10-13 08:35:29] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:01 boinc_lockfile
[2025-10-13 08:35:29] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:01 pandaJob.out
[2025-10-13 08:35:29] -rw-------. 1 boincer umatlas    974373 Oct 13 00:02 agis_schedconf.cvmfs.json
[2025-10-13 08:35:29] drwx------. 5 boincer umatlas      4096 Oct 13 00:02 pilot3
[2025-10-13 08:35:29] -rw-r--r--. 1 boincer umatlas      6653 Oct 13 08:30 init_data.xml
[2025-10-13 08:35:29] -rw-------. 1 boincer umatlas 190433875 Oct 13 08:33 HITS.46676269._091749.pool.root.1
[2025-10-13 08:35:29] -rw-r--r--. 1 boincer umatlas       530 Oct 13 08:33 boinc_task_state.xml
[2025-10-13 08:35:29] -rw-------. 1 boincer umatlas      1055 Oct 13 08:34 memory_monitor_summary.json
[2025-10-13 08:35:29] -rw-------. 1 boincer umatlas   1560580 Oct 13 08:34 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:35:29] -rw-------. 1 boincer umatlas    660289 Oct 13 08:34 log.46676269._091749.job.log.tgz.1
[2025-10-13 08:35:29] -rw-------. 1 boincer umatlas      7822 Oct 13 08:34 heartbeat.json
[2025-10-13 08:35:29] -rw-------. 1 boincer umatlas        95 Oct 13 08:35 pilot_heartbeat.json
[2025-10-13 08:35:29] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 08:35 boinc_mmap_file
[2025-10-13 08:35:29] -rw-r--r--. 1 boincer umatlas        27 Oct 13 08:35 wrapper_checkpoint.txt
[2025-10-13 08:35:29] -rw-------. 1 boincer umatlas      4824 Oct 13 08:35 pilotlog.txt
[2025-10-13 08:35:29] -rw-------. 1 boincer umatlas   3455795 Oct 13 08:35 log.46676269._091749.job.log.1
[2025-10-13 08:35:29] -rw-------. 1 boincer umatlas       357 Oct 13 08:35 output.list
[2025-10-13 08:35:29] -rw-r--r--. 1 boincer umatlas       620 Oct 13 08:35 runtime_log
[2025-10-13 08:35:29] -rw-------. 1 boincer umatlas   4136960 Oct 13 08:35 result.tar.gz
[2025-10-13 08:35:29] -rw-------. 1 boincer umatlas       654 Oct 13 08:35 TffNDmmEKS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm6EVMDmGnz6Zn.diag
[2025-10-13 08:35:29] -rw-r--r--. 1 boincer umatlas      8689 Oct 13 08:35 runtime_log.err
[2025-10-13 08:35:29] -rw-r--r--. 1 boincer umatlas     21279 Oct 13 08:35 stderr.txt
[2025-10-13 08:35:29] HITS file was successfully produced:
[2025-10-13 08:35:29] -rw-------. 1 boincer umatlas 190433875 Oct 13 08:33 shared/HITS.pool.root.1
[2025-10-13 08:35:29]  *** Contents of shared directory: ***
[2025-10-13 08:35:29] total 405160
[2025-10-13 08:35:29] -rw-r--r--. 2 boincer umatlas 219713259 Oct 13 00:01 ATLAS.root_0
[2025-10-13 08:35:29] -rw-r--r--. 2 boincer umatlas    569685 Oct 13 00:01 input.tar.gz
[2025-10-13 08:35:29] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:01 start_atlas.sh
[2025-10-13 08:35:29] -rw-------. 1 boincer umatlas 190433875 Oct 13 08:33 HITS.pool.root.1
[2025-10-13 08:35:29] -rw-------. 1 boincer umatlas   4136960 Oct 13 08:35 result.tar.gz
08:35:30 (3010381): run_atlas exited; CPU time 48265.825290
08:35:30 (3010381): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN