Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:13:48 (3593513): wrapper (7.7.26015): starting
00:13:48 (3593513): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 00:13:48] Arguments: --nthreads 8
[2025-10-13 00:13:48] Threads: 8
[2025-10-13 00:13:48] Checking for CVMFS
[2025-10-13 00:13:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:13:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:13:49] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:13:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:13:50] 2.13.2.0 3269412 36672 374764 151648 3 238 40338874 40960001 36624 16776704 0 474046568 99.849 185621051 36754 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:13:50] CVMFS is ok
[2025-10-13 00:13:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:13:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:13:50] Further information can be found at the LHC@home message board.
[2025-10-13 00:13:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:13:50] Checking for apptainer binary...
[2025-10-13 00:13:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:13:50] Running /usr/bin/apptainer --version
[2025-10-13 00:13:50] apptainer version 1.4.3-1.el9
[2025-10-13 00:13:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:13:50] c8-16-2.aglt2.org
[2025-10-13 00:13:50] apptainer works
[2025-10-13 00:13:50] Set ATHENA_PROC_NUMBER=8
[2025-10-13 00:13:50] Set ATHENA_CORE_NUMBER=8
[2025-10-13 00:13:51] Starting ATLAS job with PandaID=6840854800
[2025-10-13 00:13:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:12:09]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:12:09]  protocol_id=None
[2025-10-13 01:12:09]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 01:12:09]  replicas=None
[2025-10-13 01:12:09]  scope=mc23_13p6TeV
[2025-10-13 01:12:09]  status=None
[2025-10-13 01:12:09]  status_code=0
[2025-10-13 01:12:09]  storage_token=
[2025-10-13 01:12:09]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6840854800/log.46676269._091743.job.log.tgz.1
[2025-10-13 01:12:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/18/87/log.46676269._091743.job.log.tgz.1
[2025-10-13 01:12:09]  workdir=None
[2025-10-13 01:12:09] ]
[2025-10-13 01:12:09] 2025-10-13 05:11:22,173 | INFO     | transferring file log.46676269._091743.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6840854800/log.46676269._091743.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 01:12:09] 2025-10-13 05:11:22,173 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6840854800/log.46676269._091743.job.log.tgz.1 /tmp/boinchome/slots/4/log.46676269._091743.job
[2025-10-13 01:12:09] 2025-10-13 05:11:22,185 | INFO     | adding to output.list: log.46676269._091743.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/18/87/log.46676269._091743.job.log.tg
[2025-10-13 01:12:09] 2025-10-13 05:11:22,185 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 01:12:09] 2025-10-13 05:11:22,185 | INFO     | summary of transferred files:
[2025-10-13 01:12:09] 2025-10-13 05:11:22,185 | INFO     |  -- lfn=log.46676269._091743.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 01:12:09] 2025-10-13 05:11:22,185 | INFO     | stage-out finished correctly
[2025-10-13 01:12:09] 2025-10-13 05:11:23,281 | INFO     | time since job start (3386s) is within the limit (172800.0s)
[2025-10-13 01:12:09] 2025-10-13 05:11:23,979 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 01:12:09] 2025-10-13 05:11:24,053 | INFO     | job 6840854800 has state=finished
[2025-10-13 01:12:09] 2025-10-13 05:11:24,053 | INFO     | preparing for final server update for job 6840854800 in state='finished'
[2025-10-13 01:12:09] 2025-10-13 05:11:24,053 | INFO     | this job has now completed (state=finished)
[2025-10-13 01:12:09] 2025-10-13 05:11:24,053 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 01:12:09] 2025-10-13 05:11:24,053 | INFO     | log transfer has been attempted: DONE
[2025-10-13 01:12:09] 2025-10-13 05:11:24,054 | INFO     | job 6840854800 has finished - writing final server update
[2025-10-13 01:12:09] 2025-10-13 05:11:24,054 | INFO     | total number of processed events: 400 (read)
[2025-10-13 01:12:09] 2025-10-13 05:11:24,054 | INFO     | executing command: lscpu
[2025-10-13 01:12:09] 2025-10-13 05:11:24,109 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 01:12:09] 2025-10-13 05:11:25,286 | INFO     | time since job start (3388s) is within the limit (172800.0s)
[2025-10-13 01:12:09] 2025-10-13 05:11:26,305 | WARNING  | process 3620474 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 01:12:09] 2025-10-13 05:11:26,305 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6840854800/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 01:12:09] 2025-10-13 05:11:26,861 | INFO     | number of running child processes to parent process 3620474: 1
[2025-10-13 01:12:09] 2025-10-13 05:11:26,861 | INFO     | maximum number of monitored processes: 6
[2025-10-13 01:12:09] 2025-10-13 05:11:27,294 | INFO     | time since job start (3390s) is within the limit (172800.0s)
[2025-10-13 01:12:09] 2025-10-13 05:11:28,810 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 01:12:09] 2025-10-13 05:11:28,815 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3761.3165390624963
[2025-10-13 01:12:09] 2025-10-13 05:11:28,828 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6840854800/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 01:12:09] 2025-10-13 05:11:28,828 | INFO     | extracted standard info from prmon json
[2025-10-13 01:12:09] 2025-10-13 05:11:28,828 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 01:12:09] 2025-10-13 05:11:28,828 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 01:12:09] 2025-10-13 05:11:28,828 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:12:09] 2025-10-13 05:11:28,829 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:12:09] 2025-10-13 05:11:28,829 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:12:09] 2025-10-13 05:11:28,829 | INFO     | sum of square deviations: 32179208.0
[2025-10-13 01:12:09] 2025-10-13 05:11:28,830 | INFO     | sum of deviations: 588316939.9999999
[2025-10-13 01:12:09] 2025-10-13 05:11:28,830 | INFO     | mean x: 1760330719.0
[2025-10-13 01:12:09] 2025-10-13 05:11:28,830 | INFO     | mean y: 2215689.787234043
[2025-10-13 01:12:09] 2025-10-13 05:11:28,830 | INFO     | -- intersect: -32181061847.37526
[2025-10-13 01:12:09] 2025-10-13 05:11:28,830 | INFO     | intersect: -32181061847.37526
[2025-10-13 01:12:09] 2025-10-13 05:11:28,830 | INFO     | chi2: 0.007581894524908121
[2025-10-13 01:12:09] 2025-10-13 05:11:28,830 | INFO     | -- intersect: -32181061847.37526
[2025-10-13 01:12:09] 2025-10-13 05:11:28,830 | INFO     | current memory leak: 18.28 B/s (using 47 data points, chi2=0.01)
[2025-10-13 01:12:09] 2025-10-13 05:11:28,830 | INFO     | could have reported an average CPU frequency of 3790 MHz (5 samples)
[2025-10-13 01:12:09] 2025-10-13 05:11:28,830 | INFO     | ..............................
[2025-10-13 01:12:09] 2025-10-13 05:11:28,830 | INFO     | . Timing measurements:
[2025-10-13 01:12:09] 2025-10-13 05:11:28,830 | INFO     | . get job = 0 s
[2025-10-13 01:12:09] 2025-10-13 05:11:28,830 | INFO     | . initial setup = 4 s
[2025-10-13 01:12:09] 2025-10-13 05:11:28,830 | INFO     | . payload setup = 31 s
[2025-10-13 01:12:09] 2025-10-13 05:11:28,830 | INFO     | . stage-in = 0 s
[2025-10-13 01:12:09] 2025-10-13 05:11:28,831 | INFO     | . payload execution = 3292 s
[2025-10-13 01:12:09] 2025-10-13 05:11:28,831 | INFO     | . stage-out = 0 s
[2025-10-13 01:12:09] 2025-10-13 05:11:28,831 | INFO     | . log creation = 0 s
[2025-10-13 01:12:09] 2025-10-13 05:11:28,831 | INFO     | ..............................
[2025-10-13 01:12:09] 2025-10-13 05:11:28,885 | INFO     | 
[2025-10-13 01:12:09] 2025-10-13 05:11:28,886 | INFO     | job summary report
[2025-10-13 01:12:09] 2025-10-13 05:11:28,886 | INFO     | --------------------------------------------------
[2025-10-13 01:12:09] 2025-10-13 05:11:28,886 | INFO     | PanDA job id: 6840854800
[2025-10-13 01:12:09] 2025-10-13 05:11:28,886 | INFO     | task id: 46676269
[2025-10-13 01:12:09] 2025-10-13 05:11:28,886 | INFO     | errors: (none)
[2025-10-13 01:12:09] 2025-10-13 05:11:28,886 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:12:09] 2025-10-13 05:11:28,886 | INFO     | pilot state: finished 
[2025-10-13 01:12:09] 2025-10-13 05:11:28,886 | INFO     | transexitcode: 0
[2025-10-13 01:12:09] 2025-10-13 05:11:28,886 | INFO     | exeerrorcode: 0
[2025-10-13 01:12:09] 2025-10-13 05:11:28,886 | INFO     | exeerrordiag: 
[2025-10-13 01:12:09] 2025-10-13 05:11:28,886 | INFO     | exitcode: 0
[2025-10-13 01:12:09] 2025-10-13 05:11:28,886 | INFO     | exitmsg: OK
[2025-10-13 01:12:09] 2025-10-13 05:11:28,886 | INFO     | cpuconsumptiontime: 22261 s
[2025-10-13 01:12:09] 2025-10-13 05:11:28,886 | INFO     | nevents: 400
[2025-10-13 01:12:09] 2025-10-13 05:11:28,886 | INFO     | neventsw: 0
[2025-10-13 01:12:09] 2025-10-13 05:11:28,886 | INFO     | pid: 3620474
[2025-10-13 01:12:09] 2025-10-13 05:11:28,886 | INFO     | pgrp: 3620474
[2025-10-13 01:12:09] 2025-10-13 05:11:28,886 | INFO     | corecount: 8
[2025-10-13 01:12:09] 2025-10-13 05:11:28,886 | INFO     | event service: False
[2025-10-13 01:12:09] 2025-10-13 05:11:28,886 | INFO     | sizes: {0: 2348630, 1: 2348885, 12: 2348885, 23: 2348913, 25: 2349203, 34: 2349231, 3327: 2374977, 3328: 2383975, 3330: 2384031, 3335: 2384257}
[2025-10-13 01:12:09] 2025-10-13 05:11:28,886 | INFO     | --------------------------------------------------
[2025-10-13 01:12:09] 2025-10-13 05:11:28,886 | INFO     | 
[2025-10-13 01:12:09] 2025-10-13 05:11:28,887 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-13 01:12:09] 2025-10-13 05:11:28,908 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:12:09] 2025-10-13 05:11:28,908 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:12:09] 2025-10-13 05:11:28,908 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:12:09] 2025-10-13 05:11:28,908 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:12:09] 2025-10-13 05:11:28,908 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:12:09] 2025-10-13 05:11:28,908 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:12:09] 2025-10-13 05:11:28,908 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:12:09] 2025-10-13 05:11:28,908 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:12:09] 2025-10-13 05:11:28,908 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:12:09] 2025-10-13 05:11:28,909 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:12:09] 2025-10-13 05:11:28,909 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:12:09] 2025-10-13 05:11:28,909 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:12:09] 2025-10-13 05:11:28,909 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:12:09] 2025-10-13 05:11:28,909 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:12:09] 2025-10-13 05:11:28,909 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:12:09] 2025-10-13 05:11:28,909 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:12:09] 2025-10-13 05:11:28,909 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:12:09] 2025-10-13 05:11:28,909 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:12:09] 2025-10-13 05:11:28,909 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:12:09] 2025-10-13 05:11:28,909 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:12:09] 2025-10-13 05:11:28,909 | INFO     | job 6840854800 has completed (purged errors)
[2025-10-13 01:12:09] 2025-10-13 05:11:28,909 | INFO     | overall cleanup function is called
[2025-10-13 01:12:09] 2025-10-13 05:11:29,914 | INFO     | --- collectZombieJob: --- 10, [3620474]
[2025-10-13 01:12:09] 2025-10-13 05:11:29,914 | INFO     | zombie collector waiting for pid 3620474
[2025-10-13 01:12:09] 2025-10-13 05:11:29,914 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:12:09] 2025-10-13 05:11:29,914 | INFO     | collected zombie processes
[2025-10-13 01:12:09] 2025-10-13 05:11:29,914 | INFO     | will attempt to kill all subprocesses of pid=3620474
[2025-10-13 01:12:09] 2025-10-13 05:11:30,492 | INFO     | process IDs to be killed: [3620474] (in reverse order)
[2025-10-13 01:12:09] 2025-10-13 05:11:30,738 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:12:09] 2025-10-13 05:11:30,738 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:12:09] 2025-10-13 05:11:30,772 | INFO     | did not find any defunct processes belonging to 3620474
[2025-10-13 01:12:09] 2025-10-13 05:11:30,804 | INFO     | did not find any defunct processes belonging to 3620474
[2025-10-13 01:12:09] 2025-10-13 05:11:30,804 | INFO     | ready for new job
[2025-10-13 01:12:09] 2025-10-13 05:11:30,804 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:12:09] 2025-10-13 05:11:30,806 | INFO     | ***************************************
[2025-10-13 01:12:09] 2025-10-13 05:11:30,806 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:12:09] 2025-10-13 05:11:30,806 | INFO     | ***************************************
[2025-10-13 01:12:09] 2025-10-13 05:11:30,806 | INFO     | 
[2025-10-13 01:12:09] 2025-10-13 05:11:30,824 | INFO     | architecture information:
[2025-10-13 01:12:09] 2025-10-13 05:11:30,824 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:12:09] 2025-10-13 05:11:30,838 | INFO     | cat /etc/os-release:
[2025-10-13 01:12:09] NAME="CentOS Linux"
[2025-10-13 01:12:09] VERSION="7 (Core)"
[2025-10-13 01:12:09] ID="centos"
[2025-10-13 01:12:09] ID_LIKE="rhel fedora"
[2025-10-13 01:12:09] VERSION_ID="7"
[2025-10-13 01:12:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:12:09] ANSI_COLOR="0;31"
[2025-10-13 01:12:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:12:09] HOME_URL="https://www.centos.org/"
[2025-10-13 01:12:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:12:09] 
[2025-10-13 01:12:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:12:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:12:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:12:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:12:09] 
[2025-10-13 01:12:09] 2025-10-13 05:11:30,838 | INFO     | ***************************************
[2025-10-13 01:12:09] 2025-10-13 05:11:31,341 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-13 01:12:09] 2025-10-13 05:11:31,356 | INFO     | sufficient remaining disk space (166163644416 B)
[2025-10-13 01:12:09] 2025-10-13 05:11:31,356 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:12:09] 2025-10-13 05:11:31,356 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:12:09] 2025-10-13 05:11:31,356 | INFO     | update_server=False
[2025-10-13 01:12:09] 2025-10-13 05:11:31,356 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:12:09] 2025-10-13 05:11:31,356 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:12:09] 2025-10-13 05:11:31,357 | INFO     | aborting loop
[2025-10-13 01:12:09] 2025-10-13 05:11:31,833 | INFO     | all payload control threads have been joined
[2025-10-13 01:12:09] 2025-10-13 05:11:32,205 | INFO     | all job control threads have been joined
[2025-10-13 01:12:09] 2025-10-13 05:11:32,207 | INFO     | all data control threads have been joined
[2025-10-13 01:12:09] 2025-10-13 05:11:32,362 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:12:09] 2025-10-13 05:11:32,363 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:12:09] 2025-10-13 05:11:32,550 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:12:09] 2025-10-13 05:11:32,728 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:12:09] 2025-10-13 05:11:32,815 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:12:09] 2025-10-13 05:11:32,838 | INFO     | [payload] control thread has finished
[2025-10-13 01:12:09] 2025-10-13 05:11:33,017 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:12:09] 2025-10-13 05:11:33,106 | INFO     | [job] validate thread has finished
[2025-10-13 01:12:09] 2025-10-13 05:11:33,158 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:12:09] 2025-10-13 05:11:33,210 | INFO     | [job] control thread has finished
[2025-10-13 01:12:09] 2025-10-13 05:11:33,213 | INFO     | [data] control thread has finished
[2025-10-13 01:12:09] 2025-10-13 05:11:33,301 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:12:09] 2025-10-13 05:11:33,484 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:12:09] 2025-10-13 05:11:33,898 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:12:09] 2025-10-13 05:11:34,543 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:12:09] 2025-10-13 05:11:34,734 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:12:09] 2025-10-13 05:11:34,903 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:12:09] 2025-10-13 05:11:38,550 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:12:09] 2025-10-13 05:11:41,873 | INFO     | job.realtimelogging is not enabled
[2025-10-13 01:12:09] 2025-10-13 05:11:42,878 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:12:09] 2025-10-13 05:12:01,095 | INFO     | PID=3603656 has CPU usage=8.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 01:12:09] 2025-10-13 05:12:01,096 | INFO     | .. there are 47 such processes running
[2025-10-13 01:12:09] 2025-10-13 05:12:01,097 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:12:09] 2025-10-13 05:12:01,097 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:12:09] 2025-10-13 05:12:01,097 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:12:09] 2025-10-13 05:12:02,090 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:12:09] 2025-10-13 05:12:03,684 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139967154255680)>', '<ExcThread(monitor, started 139966516545280)>']
[2025-10-13 01:12:09] 2025-10-13 05:12:04,113 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:12:09] 2025-10-13 05:12:04,113 | INFO     | [monitor] control thread has ended
[2025-10-13 01:12:09] 2025-10-13 05:12:08,710 | INFO     | all workflow threads have been joined
[2025-10-13 01:12:09] 2025-10-13 05:12:08,710 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:12:09] 2025-10-13 05:12:08,710 | INFO     | traces error code: 0
[2025-10-13 01:12:09] 2025-10-13 05:12:08,710 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:12:09] 2025-10-13 05:12:08,820 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:12:09] 2025-10-13 05:12:08,823 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:12:09] 2025-10-13 05:12:08,825 [wrapper] pilotpid: 3603656
[2025-10-13 01:12:09] 2025-10-13 05:12:08,829 [wrapper] Pilot exit status: 0
[2025-10-13 01:12:09] 2025-10-13 05:12:08,836 [wrapper] pandaids: 6840854800
[2025-10-13 01:12:09] 2025-10-13 05:12:08,972 [wrapper] cleanup supervisor_pilot 4069038 3603657
[2025-10-13 01:12:09] 2025-10-13 05:12:08,976 [wrapper] Test setup, not cleaning
[2025-10-13 01:12:09] 2025-10-13 05:12:08,978 [wrapper] apfmon messages muted
[2025-10-13 01:12:09] 2025-10-13 05:12:08,980 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:12:09] 2025-10-13 05:12:08,983 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:12:09]  *** Error codes and diagnostics ***
[2025-10-13 01:12:09]     "exeErrorCode": 0,
[2025-10-13 01:12:09]     "exeErrorDiag": "",
[2025-10-13 01:12:09]     "pilotErrorCode": 0,
[2025-10-13 01:12:09]     "pilotErrorDiag": "",
[2025-10-13 01:12:09]  *** Listing of results directory ***
[2025-10-13 01:12:09] total 409012
[2025-10-13 01:12:09] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 18:57 pilot3.tar.gz
[2025-10-13 01:12:09] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:00 queuedata.json
[2025-10-13 01:12:09] -rwx------. 1 boincer umatlas     36292 Oct 12 19:00 runpilot2-wrapper.sh
[2025-10-13 01:12:09] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:12:09] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:13 run_atlas
[2025-10-13 01:12:09] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:13 job.xml
[2025-10-13 01:12:09] -rw-r--r--. 2 boincer umatlas 219713259 Oct 13 00:13 EVNT.46676267._004641.pool.root.1
[2025-10-13 01:12:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:13 start_atlas.sh
[2025-10-13 01:12:09] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:13 shared
[2025-10-13 01:12:09] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 00:13 input.tar.gz
[2025-10-13 01:12:09] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:13 boinc_lockfile
[2025-10-13 01:12:09] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:13 pandaJob.out
[2025-10-13 01:12:09] -rw-------. 1 boincer umatlas    974373 Oct 13 00:14 agis_schedconf.cvmfs.json
[2025-10-13 01:12:09] -rw-------. 1 boincer umatlas   1560580 Oct 13 00:14 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:12:09] drwx------. 5 boincer umatlas      4096 Oct 13 00:14 pilot3
[2025-10-13 01:12:09] -rw-r--r--. 1 boincer umatlas      7161 Oct 13 01:10 init_data.xml
[2025-10-13 01:12:09] -rw-------. 1 boincer umatlas 193623609 Oct 13 01:10 HITS.46676269._091743.pool.root.1
[2025-10-13 01:12:09] -rw-r--r--. 1 boincer umatlas       529 Oct 13 01:11 boinc_task_state.xml
[2025-10-13 01:12:09] -rw-------. 1 boincer umatlas      1034 Oct 13 01:11 memory_monitor_summary.json
[2025-10-13 01:12:09] -rw-------. 1 boincer umatlas    302439 Oct 13 01:11 log.46676269._091743.job.log.tgz.1
[2025-10-13 01:12:09] -rw-------. 1 boincer umatlas      7776 Oct 13 01:11 heartbeat.json
[2025-10-13 01:12:09] -rw-------. 1 boincer umatlas        95 Oct 13 01:12 pilot_heartbeat.json
[2025-10-13 01:12:09] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 01:12 boinc_mmap_file
[2025-10-13 01:12:09] -rw-r--r--. 1 boincer umatlas        27 Oct 13 01:12 wrapper_checkpoint.txt
[2025-10-13 01:12:09] -rw-------. 1 boincer umatlas      4897 Oct 13 01:12 pilotlog.txt
[2025-10-13 01:12:09] -rw-------. 1 boincer umatlas    494275 Oct 13 01:12 log.46676269._091743.job.log.1
[2025-10-13 01:12:09] -rw-------. 1 boincer umatlas       357 Oct 13 01:12 output.list
[2025-10-13 01:12:09] -rw-r--r--. 1 boincer umatlas       620 Oct 13 01:12 runtime_log
[2025-10-13 01:12:09] -rw-------. 1 boincer umatlas    819200 Oct 13 01:12 result.tar.gz
[2025-10-13 01:12:09] -rw-------. 1 boincer umatlas       651 Oct 13 01:12 Yb7MDmmEKS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm0EVMDmrB37wn.diag
[2025-10-13 01:12:09] -rw-r--r--. 1 boincer umatlas      8698 Oct 13 01:12 runtime_log.err
[2025-10-13 01:12:09] -rw-r--r--. 1 boincer umatlas     21812 Oct 13 01:12 stderr.txt
[2025-10-13 01:12:09] HITS file was successfully produced:
[2025-10-13 01:12:09] -rw-------. 1 boincer umatlas 193623609 Oct 13 01:10 shared/HITS.pool.root.1
[2025-10-13 01:12:09]  *** Contents of shared directory: ***
[2025-10-13 01:12:09] total 405032
[2025-10-13 01:12:09] -rw-r--r--. 2 boincer umatlas 219713259 Oct 13 00:13 ATLAS.root_0
[2025-10-13 01:12:09] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:13 start_atlas.sh
[2025-10-13 01:12:09] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 00:13 input.tar.gz
[2025-10-13 01:12:09] -rw-------. 1 boincer umatlas 193623609 Oct 13 01:10 HITS.pool.root.1
[2025-10-13 01:12:09] -rw-------. 1 boincer umatlas    819200 Oct 13 01:12 result.tar.gz
01:12:10 (3593513): run_atlas exited; CPU time 22389.818672
01:12:10 (3593513): called boinc_finish(0)

</stderr_txt>
]]>

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