Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:06:14 (2896551): wrapper (7.7.26015): starting
20:06:14 (2896551): wrapper: running run_atlas (--nthreads 6)
[2025-10-13 20:06:14] Arguments: --nthreads 6
[2025-10-13 20:06:14] Threads: 6
[2025-10-13 20:06:14] Checking for CVMFS
[2025-10-13 20:06:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 20:06:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 20:06:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 20:06:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 20:06:15] 2.11.5.0 3385007 5767 98576 151659 3 43 13678351 20971521 858 130560 0 11495802 99.996 196463 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
[2025-10-13 20:06:15] CVMFS is ok
[2025-10-13 20:06:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 20:06:15] Checking for apptainer binary...
[2025-10-13 20:06:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 20:06:15] Running /usr/bin/apptainer --version
[2025-10-13 20:06:15] apptainer version 1.3.6-1.el9
[2025-10-13 20:06:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 20:06:15] testio006
[2025-10-13 20:06:15] apptainer works
[2025-10-13 20:06:15] Set ATHENA_PROC_NUMBER=6
[2025-10-13 20:06:15] Set ATHENA_CORE_NUMBER=6
[2025-10-13 20:06:15] Starting ATLAS job with PandaID=6840749216
[2025-10-13 20:06:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 21:27:45]  *** The last 200 lines of the pilot log: ***
[2025-10-13 21:27:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 21:27:45]  replicas=None
[2025-10-13 21:27:45]  scope=mc23_13p6TeV
[2025-10-13 21:27:45]  status=None
[2025-10-13 21:27:45]  status_code=0
[2025-10-13 21:27:45]  storage_token=
[2025-10-13 21:27:45]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6840749216/log.46676269._088737.job.log.tgz.1
[2025-10-13 21:27:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7b/86/log.46676269._088737.job.log.tgz.1
[2025-10-13 21:27:45]  workdir=None
[2025-10-13 21:27:45] ]
[2025-10-13 21:27:45] 2025-10-13 12:27:08,458 | INFO     | transferring file log.46676269._088737.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6840749216/log.46676269._088737.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-13 21:27:45] 2025-10-13 12:27:08,458 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6840749216/log.46676269._088737.job.log.tgz.1 /var/lib/boinc/slots/1/log.46676269._088737.job
[2025-10-13 21:27:45] 2025-10-13 12:27:08,467 | INFO     | adding to output.list: log.46676269._088737.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7b/86/log.46676269._088737.job.log.tg
[2025-10-13 21:27:45] 2025-10-13 12:27:08,468 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 21:27:45] 2025-10-13 12:27:08,468 | INFO     | summary of transferred files:
[2025-10-13 21:27:45] 2025-10-13 12:27:08,468 | INFO     |  -- lfn=log.46676269._088737.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 21:27:45] 2025-10-13 12:27:08,468 | INFO     | stage-out finished correctly
[2025-10-13 21:27:45] 2025-10-13 12:27:08,551 | INFO     | time since job start (4845s) is within the limit (172800.0s)
[2025-10-13 21:27:45] 2025-10-13 12:27:10,084 | INFO     | monitor loop #363: job 0:6840749216 is in state 'finished'
[2025-10-13 21:27:45] 2025-10-13 12:27:10,084 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:27:45] 2025-10-13 12:27:10,557 | INFO     | time since job start (4847s) is within the limit (172800.0s)
[2025-10-13 21:27:45] 2025-10-13 12:27:10,753 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 21:27:45] 2025-10-13 12:27:11,889 | INFO     | job 6840749216 has state=finished
[2025-10-13 21:27:45] 2025-10-13 12:27:11,889 | INFO     | preparing for final server update for job 6840749216 in state='finished'
[2025-10-13 21:27:45] 2025-10-13 12:27:11,889 | INFO     | this job has now completed (state=finished)
[2025-10-13 21:27:45] 2025-10-13 12:27:11,889 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 21:27:45] 2025-10-13 12:27:11,889 | INFO     | log transfer has been attempted: DONE
[2025-10-13 21:27:45] 2025-10-13 12:27:11,889 | INFO     | job 6840749216 has finished - writing final server update
[2025-10-13 21:27:45] 2025-10-13 12:27:11,890 | INFO     | total number of processed events: 400 (read)
[2025-10-13 21:27:45] 2025-10-13 12:27:11,890 | INFO     | executing command: lscpu
[2025-10-13 21:27:45] 2025-10-13 12:27:11,905 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 21:27:45] 2025-10-13 12:27:12,561 | INFO     | time since job start (4849s) is within the limit (172800.0s)
[2025-10-13 21:27:45] 2025-10-13 12:27:12,561 | INFO     | 4853s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-13 21:27:45] 2025-10-13 12:27:12,587 | INFO     | monitor loop #364: job 0:6840749216 is in state 'finished'
[2025-10-13 21:27:45] 2025-10-13 12:27:12,587 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 21:27:45] 2025-10-13 12:27:14,023 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 21:27:45] 2025-10-13 12:27:14,025 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4028.3676875
[2025-10-13 21:27:45] 2025-10-13 12:27:14,027 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6840749216/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 21:27:45] 2025-10-13 12:27:14,027 | INFO     | extracted standard info from prmon json
[2025-10-13 21:27:45] 2025-10-13 12:27:14,027 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 21:27:45] 2025-10-13 12:27:14,027 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 21:27:45] 2025-10-13 12:27:14,027 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 21:27:45] 2025-10-13 12:27:14,027 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 21:27:45] 2025-10-13 12:27:14,028 | INFO     | fitting pss+swap vs Time
[2025-10-13 21:27:45] 2025-10-13 12:27:14,028 | INFO     | sum of square deviations: 120605052.0
[2025-10-13 21:27:45] 2025-10-13 12:27:14,029 | INFO     | sum of deviations: -66395388.99999971
[2025-10-13 21:27:45] 2025-10-13 12:27:14,029 | INFO     | mean x: 1760356104.0
[2025-10-13 21:27:45] 2025-10-13 12:27:14,029 | INFO     | mean y: 2455772.0684931506
[2025-10-13 21:27:45] 2025-10-13 12:27:14,029 | INFO     | -- intersect: 971565493.140575
[2025-10-13 21:27:45] 2025-10-13 12:27:14,029 | INFO     | intersect: 971565493.140575
[2025-10-13 21:27:45] 2025-10-13 12:27:14,029 | INFO     | chi2: 0.02833076260815733
[2025-10-13 21:27:45] 2025-10-13 12:27:14,029 | INFO     | -- intersect: 971565493.140575
[2025-10-13 21:27:45] 2025-10-13 12:27:14,029 | INFO     | current memory leak: -0.55 B/s (using 73 data points, chi2=0.03)
[2025-10-13 21:27:45] 2025-10-13 12:27:14,029 | INFO     | could have reported an average CPU frequency of 4015 MHz (6 samples)
[2025-10-13 21:27:45] 2025-10-13 12:27:14,029 | INFO     | ..............................
[2025-10-13 21:27:45] 2025-10-13 12:27:14,029 | INFO     | . Timing measurements:
[2025-10-13 21:27:45] 2025-10-13 12:27:14,029 | INFO     | . get job = 0 s
[2025-10-13 21:27:45] 2025-10-13 12:27:14,029 | INFO     | . initial setup = 4 s
[2025-10-13 21:27:45] 2025-10-13 12:27:14,030 | INFO     | . payload setup = 2 s
[2025-10-13 21:27:45] 2025-10-13 12:27:14,030 | INFO     | . stage-in = 0 s
[2025-10-13 21:27:45] 2025-10-13 12:27:14,030 | INFO     | . payload execution = 4825 s
[2025-10-13 21:27:45] 2025-10-13 12:27:14,030 | INFO     | . stage-out = 0 s
[2025-10-13 21:27:45] 2025-10-13 12:27:14,030 | INFO     | . log creation = 0 s
[2025-10-13 21:27:45] 2025-10-13 12:27:14,030 | INFO     | ..............................
[2025-10-13 21:27:45] 2025-10-13 12:27:14,079 | INFO     | 
[2025-10-13 21:27:45] 2025-10-13 12:27:14,079 | INFO     | job summary report
[2025-10-13 21:27:45] 2025-10-13 12:27:14,079 | INFO     | --------------------------------------------------
[2025-10-13 21:27:45] 2025-10-13 12:27:14,079 | INFO     | PanDA job id: 6840749216
[2025-10-13 21:27:45] 2025-10-13 12:27:14,079 | INFO     | task id: 46676269
[2025-10-13 21:27:45] 2025-10-13 12:27:14,079 | INFO     | errors: (none)
[2025-10-13 21:27:45] 2025-10-13 12:27:14,079 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 21:27:45] 2025-10-13 12:27:14,079 | INFO     | pilot state: finished 
[2025-10-13 21:27:45] 2025-10-13 12:27:14,079 | INFO     | transexitcode: 0
[2025-10-13 21:27:45] 2025-10-13 12:27:14,079 | INFO     | exeerrorcode: 0
[2025-10-13 21:27:45] 2025-10-13 12:27:14,079 | INFO     | exeerrordiag: 
[2025-10-13 21:27:45] 2025-10-13 12:27:14,079 | INFO     | exitcode: 0
[2025-10-13 21:27:45] 2025-10-13 12:27:14,079 | INFO     | exitmsg: OK
[2025-10-13 21:27:45] 2025-10-13 12:27:14,079 | INFO     | cpuconsumptiontime: 26671 s
[2025-10-13 21:27:45] 2025-10-13 12:27:14,079 | INFO     | nevents: 400
[2025-10-13 21:27:45] 2025-10-13 12:27:14,079 | INFO     | neventsw: 0
[2025-10-13 21:27:45] 2025-10-13 12:27:14,079 | INFO     | pid: 2907043
[2025-10-13 21:27:45] 2025-10-13 12:27:14,079 | INFO     | pgrp: 2907043
[2025-10-13 21:27:45] 2025-10-13 12:27:14,080 | INFO     | corecount: 6
[2025-10-13 21:27:45] 2025-10-13 12:27:14,080 | INFO     | event service: False
[2025-10-13 21:27:45] 2025-10-13 12:27:14,080 | INFO     | sizes: {0: 2348857, 2: 2349119, 10: 2349147, 4831: 2384454, 4834: 2384454, 4837: 2384648}
[2025-10-13 21:27:45] 2025-10-13 12:27:14,080 | INFO     | --------------------------------------------------
[2025-10-13 21:27:45] 2025-10-13 12:27:14,080 | INFO     | 
[2025-10-13 21:27:45] 2025-10-13 12:27:14,080 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-13 21:27:45] 2025-10-13 12:27:14,090 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 21:27:45] 2025-10-13 12:27:14,090 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 21:27:45] 2025-10-13 12:27:14,090 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 21:27:45] 2025-10-13 12:27:14,091 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 21:27:45] 2025-10-13 12:27:14,091 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 21:27:45] 2025-10-13 12:27:14,091 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 21:27:45] 2025-10-13 12:27:14,091 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 21:27:45] 2025-10-13 12:27:14,091 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 21:27:45] 2025-10-13 12:27:14,091 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 21:27:45] 2025-10-13 12:27:14,091 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 21:27:45] 2025-10-13 12:27:14,091 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 21:27:45] 2025-10-13 12:27:14,091 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 21:27:45] 2025-10-13 12:27:14,091 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 21:27:45] 2025-10-13 12:27:14,091 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 21:27:45] 2025-10-13 12:27:14,091 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 21:27:45] 2025-10-13 12:27:14,091 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 21:27:45] 2025-10-13 12:27:14,091 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 21:27:45] 2025-10-13 12:27:14,091 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 21:27:45] 2025-10-13 12:27:14,091 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 21:27:45] 2025-10-13 12:27:14,091 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 21:27:45] 2025-10-13 12:27:14,091 | INFO     | job 6840749216 has completed (purged errors)
[2025-10-13 21:27:45] 2025-10-13 12:27:14,091 | INFO     | overall cleanup function is called
[2025-10-13 21:27:45] 2025-10-13 12:27:15,098 | INFO     | --- collectZombieJob: --- 10, [2907043]
[2025-10-13 21:27:45] 2025-10-13 12:27:15,098 | INFO     | zombie collector waiting for pid 2907043
[2025-10-13 21:27:45] 2025-10-13 12:27:15,098 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 21:27:45] 2025-10-13 12:27:15,098 | INFO     | collected zombie processes
[2025-10-13 21:27:45] 2025-10-13 12:27:15,098 | INFO     | will attempt to kill all subprocesses of pid=2907043
[2025-10-13 21:27:45] 2025-10-13 12:27:15,160 | INFO     | process IDs to be killed: [2907043] (in reverse order)
[2025-10-13 21:27:45] 2025-10-13 12:27:15,185 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 21:27:45] 2025-10-13 12:27:15,186 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 21:27:45] 2025-10-13 12:27:15,188 | INFO     | did not find any defunct processes belonging to 2907043
[2025-10-13 21:27:45] 2025-10-13 12:27:15,189 | INFO     | did not find any defunct processes belonging to 2907043
[2025-10-13 21:27:45] 2025-10-13 12:27:15,189 | INFO     | ready for new job
[2025-10-13 21:27:45] 2025-10-13 12:27:15,189 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 21:27:45] 2025-10-13 12:27:15,190 | INFO     | ***************************************
[2025-10-13 21:27:45] 2025-10-13 12:27:15,190 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 21:27:45] 2025-10-13 12:27:15,190 | INFO     | ***************************************
[2025-10-13 21:27:45] 2025-10-13 12:27:15,190 | INFO     | 
[2025-10-13 21:27:45] 2025-10-13 12:27:15,191 | INFO     | architecture information:
[2025-10-13 21:27:45] 2025-10-13 12:27:15,191 | INFO     | executing command: cat /etc/os-release
[2025-10-13 21:27:45] 2025-10-13 12:27:15,198 | INFO     | cat /etc/os-release:
[2025-10-13 21:27:45] NAME="CentOS Linux"
[2025-10-13 21:27:45] VERSION="7 (Core)"
[2025-10-13 21:27:45] ID="centos"
[2025-10-13 21:27:45] ID_LIKE="rhel fedora"
[2025-10-13 21:27:45] VERSION_ID="7"
[2025-10-13 21:27:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 21:27:45] ANSI_COLOR="0;31"
[2025-10-13 21:27:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 21:27:45] HOME_URL="https://www.centos.org/"
[2025-10-13 21:27:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 21:27:45] 
[2025-10-13 21:27:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 21:27:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 21:27:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 21:27:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 21:27:45] 
[2025-10-13 21:27:45] 2025-10-13 12:27:15,199 | INFO     | ***************************************
[2025-10-13 21:27:45] 2025-10-13 12:27:15,701 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-13 21:27:45] 2025-10-13 12:27:15,710 | INFO     | sufficient remaining disk space (84038123520 B)
[2025-10-13 21:27:45] 2025-10-13 12:27:15,710 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 21:27:45] 2025-10-13 12:27:15,711 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 21:27:45] 2025-10-13 12:27:15,711 | INFO     | update_server=False
[2025-10-13 21:27:45] 2025-10-13 12:27:15,711 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 21:27:45] 2025-10-13 12:27:15,711 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:27:45] 2025-10-13 12:27:16,095 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:27:45] 2025-10-13 12:27:16,095 | INFO     | aborting loop
[2025-10-13 21:27:45] 2025-10-13 12:27:16,263 | INFO     | all data control threads have been joined
[2025-10-13 21:27:45] 2025-10-13 12:27:16,525 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 21:27:45] 2025-10-13 12:27:16,716 | INFO     | [job] queue monitor thread has finished
[2025-10-13 21:27:45] 2025-10-13 12:27:16,716 | INFO     | [job] retrieve thread has finished
[2025-10-13 21:27:45] 2025-10-13 12:27:16,805 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 21:27:45] 2025-10-13 12:27:16,829 | INFO     | all job control threads have been joined
[2025-10-13 21:27:45] 2025-10-13 12:27:17,034 | INFO     | all payload control threads have been joined
[2025-10-13 21:27:45] 2025-10-13 12:27:17,101 | INFO     | [job] job monitor thread has finished
[2025-10-13 21:27:45] 2025-10-13 12:27:17,107 | INFO     | [payload] validate_post thread has finished
[2025-10-13 21:27:45] 2025-10-13 12:27:17,196 | INFO     | [data] copytool_in thread has finished
[2025-10-13 21:27:45] 2025-10-13 12:27:17,268 | INFO     | [data] control thread has finished
[2025-10-13 21:27:45] 2025-10-13 12:27:17,600 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 21:27:45] 2025-10-13 12:27:17,664 | INFO     | [job] validate thread has finished
[2025-10-13 21:27:45] 2025-10-13 12:27:17,765 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 21:27:45] 2025-10-13 12:27:17,835 | INFO     | [job] control thread has finished
[2025-10-13 21:27:45] 2025-10-13 12:27:18,001 | INFO     | [payload] failed_post thread has finished
[2025-10-13 21:27:45] 2025-10-13 12:27:18,039 | INFO     | [payload] control thread has finished
[2025-10-13 21:27:45] 2025-10-13 12:27:18,065 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 21:27:45] 2025-10-13 12:27:18,530 | INFO     | [data] copytool_out thread has finished
[2025-10-13 21:27:45] 2025-10-13 12:27:20,809 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 21:27:45] 2025-10-13 12:27:26,183 | INFO     | job.realtimelogging is not enabled
[2025-10-13 21:27:45] 2025-10-13 12:27:27,188 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 21:27:45] 2025-10-13 12:27:30,033 | INFO     | [monitor] cgroup control has ended
[2025-10-13 21:27:45] 2025-10-13 12:27:31,573 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140080908711744)>', '<ExcThread(monitor, started 140080266069760)>']
[2025-10-13 21:27:45] 2025-10-13 12:27:36,598 | INFO     | all workflow threads have been joined
[2025-10-13 21:27:45] 2025-10-13 12:27:36,599 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 21:27:45] 2025-10-13 12:27:36,599 | INFO     | traces error code: 0
[2025-10-13 21:27:45] 2025-10-13 12:27:36,599 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 21:27:45] 2025-10-13 12:27:45,733 | INFO     | PID=2900323 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 21:27:45] 2025-10-13 12:27:45,733 | INFO     | .. there are 2 such processes running
[2025-10-13 21:27:45] 2025-10-13 12:27:45,733 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 21:27:45] 2025-10-13 12:27:45,733 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 21:27:45] 2025-10-13 12:27:45,734 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 21:27:45] 2025-10-13 12:27:45,734 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 21:27:45] 2025-10-13 12:27:45,734 | INFO     | [monitor] control thread has ended
[2025-10-13 21:27:45] 2025-10-13 12:27:45,790 [wrapper] ==== pilot stdout END ====
[2025-10-13 21:27:45] 2025-10-13 12:27:45,792 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 21:27:45] 2025-10-13 12:27:45,793 [wrapper] pilotpid: 2900323
[2025-10-13 21:27:45] 2025-10-13 12:27:45,794 [wrapper] Pilot exit status: 0
[2025-10-13 21:27:45] 2025-10-13 12:27:45,800 [wrapper] pandaids: 6840749216
[2025-10-13 21:27:45] 2025-10-13 12:27:45,817 [wrapper] cleanup supervisor_pilot 2923294 2900324
[2025-10-13 21:27:45] 2025-10-13 12:27:45,818 [wrapper] Test setup, not cleaning
[2025-10-13 21:27:45] 2025-10-13 12:27:45,820 [wrapper] apfmon messages muted
[2025-10-13 21:27:45] 2025-10-13 12:27:45,821 [wrapper] ==== wrapper stdout END ====
[2025-10-13 21:27:45] 2025-10-13 12:27:45,823 [wrapper] ==== wrapper stderr END ====
[2025-10-13 21:27:45]  *** Error codes and diagnostics ***
[2025-10-13 21:27:45]     "exeErrorCode": 0,
[2025-10-13 21:27:45]     "exeErrorDiag": "",
[2025-10-13 21:27:45]     "pilotErrorCode": 0,
[2025-10-13 21:27:45]     "pilotErrorDiag": "",
[2025-10-13 21:27:45]  *** Listing of results directory ***
[2025-10-13 21:27:45] total 411552
[2025-10-13 21:27:45] -rw-r--r--. 1 boinc boinc    557409 Oct 13 05:23 pilot3.tar.gz
[2025-10-13 21:27:45] -rw-r--r--. 1 boinc boinc      5112 Oct 13 05:31 queuedata.json
[2025-10-13 21:27:45] -rwx------. 1 boinc boinc     36292 Oct 13 05:33 runpilot2-wrapper.sh
[2025-10-13 21:27:45] -rw-r--r--. 1 boinc boinc       100 Oct 13 20:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 21:27:45] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 20:06 run_atlas
[2025-10-13 21:27:45] -rw-r--r--. 1 boinc boinc       105 Oct 13 20:06 job.xml
[2025-10-13 21:27:45] -rw-r--r--. 1 boinc boinc      9465 Oct 13 20:06 init_data.xml
[2025-10-13 21:27:45] -rw-r--r--. 2 boinc boinc 220459629 Oct 13 20:06 EVNT.46676267._004502.pool.root.1
[2025-10-13 21:27:45] -rw-r--r--. 2 boinc boinc     15120 Oct 13 20:06 start_atlas.sh
[2025-10-13 21:27:45] drwxrwx--x. 2 boinc boinc        68 Oct 13 20:06 shared
[2025-10-13 21:27:45] -rw-r--r--. 2 boinc boinc    569680 Oct 13 20:06 input.tar.gz
[2025-10-13 21:27:45] -rw-r--r--. 1 boinc boinc         0 Oct 13 20:06 boinc_lockfile
[2025-10-13 21:27:45] -rw-r--r--. 1 boinc boinc      2550 Oct 13 20:06 pandaJob.out
[2025-10-13 21:27:45] -rw-------. 1 boinc boinc    972497 Oct 13 20:06 agis_schedconf.cvmfs.json
[2025-10-13 21:27:45] -rw-------. 1 boinc boinc   1560580 Oct 13 20:06 agis_ddmendpoints.agis.ALL.json
[2025-10-13 21:27:45] drwx------. 5 boinc boinc      4096 Oct 13 20:06 pilot3
[2025-10-13 21:27:45] -rw-------. 1 boinc boinc 195073972 Oct 13 21:26 HITS.46676269._088737.pool.root.1
[2025-10-13 21:27:45] -rw-------. 1 boinc boinc        95 Oct 13 21:26 pilot_heartbeat.json
[2025-10-13 21:27:45] -rw-------. 1 boinc boinc      1014 Oct 13 21:27 memory_monitor_summary.json
[2025-10-13 21:27:45] -rw-------. 1 boinc boinc    284698 Oct 13 21:27 log.46676269._088737.job.log.tgz.1
[2025-10-13 21:27:45] -rw-r--r--. 1 boinc boinc       529 Oct 13 21:27 boinc_task_state.xml
[2025-10-13 21:27:45] -rw-------. 1 boinc boinc      7748 Oct 13 21:27 heartbeat.json
[2025-10-13 21:27:45] -rw-r--r--. 1 boinc boinc      8192 Oct 13 21:27 boinc_mmap_file
[2025-10-13 21:27:45] -rw-r--r--. 1 boinc boinc        27 Oct 13 21:27 wrapper_checkpoint.txt
[2025-10-13 21:27:45] -rw-------. 1 boinc boinc       822 Oct 13 21:27 pilotlog.txt
[2025-10-13 21:27:45] -rw-------. 1 boinc boinc    716962 Oct 13 21:27 log.46676269._088737.job.log.1
[2025-10-13 21:27:45] -rw-------. 1 boinc boinc       357 Oct 13 21:27 output.list
[2025-10-13 21:27:45] -rw-r--r--. 1 boinc boinc       620 Oct 13 21:27 runtime_log
[2025-10-13 21:27:45] -rw-------. 1 boinc boinc   1024000 Oct 13 21:27 result.tar.gz
[2025-10-13 21:27:45] -rw-r--r--. 1 boinc boinc      8661 Oct 13 21:27 runtime_log.err
[2025-10-13 21:27:45] -rw-------. 1 boinc boinc       641 Oct 13 21:27 jrUKDmnvHS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGTlNDmmvEWzn.diag
[2025-10-13 21:27:45] -rw-r--r--. 1 boinc boinc     21509 Oct 13 21:27 stderr.txt
[2025-10-13 21:27:45] HITS file was successfully produced:
[2025-10-13 21:27:45] -rw-------. 1 boinc boinc 195073972 Oct 13 21:26 shared/HITS.pool.root.1
[2025-10-13 21:27:45]  *** Contents of shared directory: ***
[2025-10-13 21:27:45] total 407376
[2025-10-13 21:27:45] -rw-r--r--. 2 boinc boinc 220459629 Oct 13 20:06 ATLAS.root_0
[2025-10-13 21:27:45] -rw-r--r--. 2 boinc boinc     15120 Oct 13 20:06 start_atlas.sh
[2025-10-13 21:27:45] -rw-r--r--. 2 boinc boinc    569680 Oct 13 20:06 input.tar.gz
[2025-10-13 21:27:45] -rw-------. 1 boinc boinc 195073972 Oct 13 21:26 HITS.pool.root.1
[2025-10-13 21:27:45] -rw-------. 1 boinc boinc   1024000 Oct 13 21:27 result.tar.gz
21:27:47 (2896551): run_atlas exited; CPU time 26712.823998
21:27:47 (2896551): called boinc_finish(0)

</stderr_txt>
]]>

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