Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:45 (3004747): wrapper (7.7.26015): starting
00:01:45 (3004747): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:01:45] Arguments: --nthreads 12
[2025-10-13 00:01:45] Threads: 12
[2025-10-13 00:01:45] Checking for CVMFS
[2025-10-13 00:01:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:01:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:01:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:01:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:01:46] 2.13.2.0 5096 6613 90364 151647 2 29 38396001 40960001 21428 16776704 0 18043477 99.873 4247698 33469 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 00:01:46] CVMFS is ok
[2025-10-13 00:01:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:01:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:01:46] Further information can be found at the LHC@home message board.
[2025-10-13 00:01:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:01:46] Checking for apptainer binary...
[2025-10-13 00:01:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:01:46] Running /usr/bin/apptainer --version
[2025-10-13 00:01:46] apptainer version 1.4.3-1.el9
[2025-10-13 00:01:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:01:46] c-212-5.aglt2.org
[2025-10-13 00:01:46] apptainer works
[2025-10-13 00:01:46] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:01:46] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:01:46] Starting ATLAS job with PandaID=6840962115
[2025-10-13 00:01:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:58:16]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:58:16] 2025-10-13 05:34:56,225 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/7/PanDA_Pilot-6840962115/log.46676269._092086.job.log.tgz.1 /tmp/boinchome/slots/7/log.46676269._092086.job
[2025-10-13 04:58:16] 2025-10-13 05:34:56,250 | INFO     | adding to output.list: log.46676269._092086.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/fc/5b/log.46676269._092086.job.log.tg
[2025-10-13 04:58:16] 2025-10-13 05:34:56,251 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 04:58:16] 2025-10-13 05:34:56,251 | INFO     | summary of transferred files:
[2025-10-13 04:58:16] 2025-10-13 05:34:56,251 | INFO     |  -- lfn=log.46676269._092086.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 04:58:16] 2025-10-13 05:34:56,251 | INFO     | stage-out finished correctly
[2025-10-13 04:58:16] 2025-10-13 05:34:57,058 | INFO     | monitor loop #382: job 0:6840962115 is in state 'finished'
[2025-10-13 04:58:16] 2025-10-13 05:34:57,058 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:58:16] 2025-10-13 05:34:57,830 | INFO     | time since job start (5571s) is within the limit (172800.0s)
[2025-10-13 04:58:16] 2025-10-13 05:34:58,742 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 04:58:16] 2025-10-13 05:34:59,329 | INFO     | PID=3018633 has CPU usage=14.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 04:58:16] 2025-10-13 05:34:59,329 | INFO     | .. there are 19 such processes running
[2025-10-13 04:58:16] 2025-10-13 05:34:59,564 | INFO     | monitor loop #383: job 0:6840962115 is in state 'finished'
[2025-10-13 04:58:16] 2025-10-13 05:34:59,564 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:58:16] 2025-10-13 05:35:00,331 | INFO     | time since job start (5574s) is within the limit (172800.0s)
[2025-10-13 04:58:16] 2025-10-13 05:35:00,331 | INFO     | 5577s have passed since pilot start - server update state is 'RUNNING'
[2025-10-13 04:58:16] 2025-10-13 05:35:01,480 | INFO     | job 6840962115 has state=finished
[2025-10-13 04:58:16] 2025-10-13 05:35:01,480 | INFO     | preparing for final server update for job 6840962115 in state='finished'
[2025-10-13 04:58:16] 2025-10-13 05:35:01,481 | INFO     | this job has now completed (state=finished)
[2025-10-13 04:58:16] 2025-10-13 05:35:01,481 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 04:58:16] 2025-10-13 05:35:01,481 | INFO     | log transfer has been attempted: DONE
[2025-10-13 04:58:16] 2025-10-13 05:35:01,481 | INFO     | job 6840962115 has finished - writing final server update
[2025-10-13 04:58:16] 2025-10-13 05:35:01,481 | INFO     | total number of processed events: 400 (read)
[2025-10-13 04:58:16] 2025-10-13 05:35:01,486 | INFO     | executing command: lscpu
[2025-10-13 04:58:16] 2025-10-13 05:35:01,566 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 04:58:16] 2025-10-13 05:35:02,076 | INFO     | monitor loop #384: job 0:6840962115 is in state 'finished'
[2025-10-13 04:58:16] 2025-10-13 05:35:02,076 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:58:16] 2025-10-13 05:35:02,338 | INFO     | time since job start (5576s) is within the limit (172800.0s)
[2025-10-13 04:58:16] 2025-10-13 05:35:04,345 | INFO     | time since job start (5578s) is within the limit (172800.0s)
[2025-10-13 04:58:16] 2025-10-13 05:35:04,586 | INFO     | monitor loop #385: job 0:6840962115 is in state 'finished'
[2025-10-13 04:58:16] 2025-10-13 05:35:04,586 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:58:16] 2025-10-13 05:35:06,350 | INFO     | time since job start (5580s) is within the limit (172800.0s)
[2025-10-13 04:58:16] 2025-10-13 05:35:07,092 | INFO     | monitor loop #386: job 0:6840962115 is in state 'finished'
[2025-10-13 04:58:16] 2025-10-13 05:35:07,093 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:58:16] 2025-10-13 05:35:08,369 | INFO     | time since job start (5582s) is within the limit (172800.0s)
[2025-10-13 04:58:16] 2025-10-13 05:35:09,071 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 04:58:16] 2025-10-13 05:35:09,078 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3021.8368020833327
[2025-10-13 04:58:16] 2025-10-13 05:35:09,095 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6840962115/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 04:58:16] 2025-10-13 05:35:09,095 | INFO     | extracted standard info from prmon json
[2025-10-13 04:58:16] 2025-10-13 05:35:09,095 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 04:58:16] 2025-10-13 05:35:09,096 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 04:58:16] 2025-10-13 05:35:09,096 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 04:58:16] 2025-10-13 05:35:09,096 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 04:58:16] 2025-10-13 05:35:09,098 | INFO     | fitting pss+swap vs Time
[2025-10-13 04:58:16] 2025-10-13 05:35:09,098 | INFO     | sum of square deviations: 183759086.8928575
[2025-10-13 04:58:16] 2025-10-13 05:35:09,099 | INFO     | sum of deviations: -12161513822.428572
[2025-10-13 04:58:16] 2025-10-13 05:35:09,099 | INFO     | mean x: 1760331004.5357144
[2025-10-13 04:58:16] 2025-10-13 05:35:09,099 | INFO     | mean y: 2565176.476190476
[2025-10-13 04:58:16] 2025-10-13 05:35:09,099 | INFO     | -- intersect: 116504503696.62662
[2025-10-13 04:58:16] 2025-10-13 05:35:09,099 | INFO     | intersect: 116504503696.62662
[2025-10-13 04:58:16] 2025-10-13 05:35:09,099 | INFO     | chi2: 2.61361332088972
[2025-10-13 04:58:16] 2025-10-13 05:35:09,099 | INFO     | -- intersect: 116504503696.62662
[2025-10-13 04:58:16] 2025-10-13 05:35:09,100 | INFO     | current memory leak: -66.18 B/s (using 84 data points, chi2=2.61)
[2025-10-13 04:58:16] 2025-10-13 05:35:09,100 | INFO     | could have reported an average CPU frequency of 2958 MHz (7 samples)
[2025-10-13 04:58:16] 2025-10-13 05:35:09,100 | INFO     | ..............................
[2025-10-13 04:58:16] 2025-10-13 05:35:09,100 | INFO     | . Timing measurements:
[2025-10-13 04:58:16] 2025-10-13 05:35:09,101 | INFO     | . get job = 0 s
[2025-10-13 04:58:16] 2025-10-13 05:35:09,101 | INFO     | . initial setup = 3 s
[2025-10-13 04:58:16] 2025-10-13 05:35:09,101 | INFO     | . payload setup = 12 s
[2025-10-13 04:58:16] 2025-10-13 05:35:09,101 | INFO     | . stage-in = 0 s
[2025-10-13 04:58:16] 2025-10-13 05:35:09,101 | INFO     | . payload execution = 5531 s
[2025-10-13 04:58:16] 2025-10-13 05:35:09,101 | INFO     | . stage-out = 0 s
[2025-10-13 04:58:16] 2025-10-13 05:35:09,101 | INFO     | . log creation = 0 s
[2025-10-13 04:58:16] 2025-10-13 05:35:09,101 | INFO     | ..............................
[2025-10-13 04:58:16] 2025-10-13 05:35:09,180 | INFO     | 
[2025-10-13 04:58:16] 2025-10-13 05:35:09,180 | INFO     | job summary report
[2025-10-13 04:58:16] 2025-10-13 05:35:09,180 | INFO     | --------------------------------------------------
[2025-10-13 04:58:16] 2025-10-13 05:35:09,181 | INFO     | PanDA job id: 6840962115
[2025-10-13 04:58:16] 2025-10-13 05:35:09,181 | INFO     | task id: 46676269
[2025-10-13 04:58:16] 2025-10-13 05:35:09,181 | INFO     | errors: (none)
[2025-10-13 04:58:16] 2025-10-13 05:35:09,181 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 04:58:16] 2025-10-13 05:35:09,181 | INFO     | pilot state: finished 
[2025-10-13 04:58:16] 2025-10-13 05:35:09,181 | INFO     | transexitcode: 0
[2025-10-13 04:58:16] 2025-10-13 05:35:09,181 | INFO     | exeerrorcode: 0
[2025-10-13 04:58:16] 2025-10-13 05:35:09,181 | INFO     | exeerrordiag: 
[2025-10-13 04:58:16] 2025-10-13 05:35:09,181 | INFO     | exitcode: 0
[2025-10-13 04:58:16] 2025-10-13 05:35:09,181 | INFO     | exitmsg: OK
[2025-10-13 04:58:16] 2025-10-13 05:35:09,181 | INFO     | cpuconsumptiontime: 35454 s
[2025-10-13 04:58:16] 2025-10-13 05:35:09,181 | INFO     | nevents: 400
[2025-10-13 04:58:16] 2025-10-13 05:35:09,181 | INFO     | neventsw: 0
[2025-10-13 04:58:16] 2025-10-13 05:35:09,182 | INFO     | pid: 3048936
[2025-10-13 04:58:16] 2025-10-13 05:35:09,182 | INFO     | pgrp: 3048936
[2025-10-13 04:58:16] 2025-10-13 05:35:09,182 | INFO     | corecount: 12
[2025-10-13 04:58:16] 2025-10-13 05:35:09,182 | INFO     | event service: False
[2025-10-13 04:58:16] 2025-10-13 05:35:09,182 | INFO     | sizes: {0: 2348635, 1: 2348834, 9: 2349096, 11: 2349124, 5548: 2375921, 5550: 2384919, 5553: 2385103, 5563: 2385297}
[2025-10-13 04:58:16] 2025-10-13 05:35:09,182 | INFO     | --------------------------------------------------
[2025-10-13 04:58:16] 2025-10-13 05:35:09,182 | INFO     | 
[2025-10-13 04:58:16] 2025-10-13 05:35:09,182 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-10-13 04:58:16] 2025-10-13 05:35:09,211 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 04:58:16] 2025-10-13 05:35:09,212 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 04:58:16] 2025-10-13 05:35:09,212 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 04:58:16] 2025-10-13 05:35:09,212 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 04:58:16] 2025-10-13 05:35:09,212 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 04:58:16] 2025-10-13 05:35:09,212 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 04:58:16] 2025-10-13 05:35:09,212 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 04:58:16] 2025-10-13 05:35:09,212 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 04:58:16] 2025-10-13 05:35:09,212 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 04:58:16] 2025-10-13 05:35:09,212 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 04:58:16] 2025-10-13 05:35:09,212 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 04:58:16] 2025-10-13 05:35:09,212 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 04:58:16] 2025-10-13 05:35:09,212 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 04:58:16] 2025-10-13 05:35:09,213 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 04:58:16] 2025-10-13 05:35:09,213 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 04:58:16] 2025-10-13 05:35:09,213 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 04:58:16] 2025-10-13 05:35:09,213 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 04:58:16] 2025-10-13 05:35:09,213 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 04:58:16] 2025-10-13 05:35:09,213 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 04:58:16] 2025-10-13 05:35:09,213 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 04:58:16] 2025-10-13 05:35:09,213 | INFO     | job 6840962115 has completed (purged errors)
[2025-10-13 04:58:16] 2025-10-13 05:35:09,213 | INFO     | overall cleanup function is called
[2025-10-13 04:58:16] 2025-10-13 05:35:10,224 | INFO     | --- collectZombieJob: --- 10, [3048936]
[2025-10-13 04:58:16] 2025-10-13 05:35:10,224 | INFO     | zombie collector waiting for pid 3048936
[2025-10-13 04:58:16] 2025-10-13 05:35:10,224 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 04:58:16] 2025-10-13 05:35:10,224 | INFO     | collected zombie processes
[2025-10-13 04:58:16] 2025-10-13 05:35:10,224 | INFO     | will attempt to kill all subprocesses of pid=3048936
[2025-10-13 04:58:16] 2025-10-13 05:35:10,742 | INFO     | process IDs to be killed: [3048936] (in reverse order)
[2025-10-13 04:58:16] 2025-10-13 05:35:10,861 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:58:16] 2025-10-13 05:35:10,861 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:58:16] 2025-10-13 05:35:10,904 | INFO     | did not find any defunct processes belonging to 3048936
[2025-10-13 04:58:16] 2025-10-13 05:35:10,920 | INFO     | did not find any defunct processes belonging to 3048936
[2025-10-13 04:58:16] 2025-10-13 05:35:10,920 | INFO     | ready for new job
[2025-10-13 04:58:16] 2025-10-13 05:35:10,920 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:58:16] 2025-10-13 05:35:10,922 | INFO     | ***************************************
[2025-10-13 04:58:16] 2025-10-13 05:35:10,922 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:58:16] 2025-10-13 05:35:10,922 | INFO     | ***************************************
[2025-10-13 04:58:16] 2025-10-13 05:35:10,922 | INFO     | 
[2025-10-13 04:58:16] 2025-10-13 05:35:10,927 | INFO     | architecture information:
[2025-10-13 04:58:16] 2025-10-13 05:35:10,930 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:58:16] 2025-10-13 05:35:10,948 | INFO     | cat /etc/os-release:
[2025-10-13 04:58:16] NAME="CentOS Linux"
[2025-10-13 04:58:16] VERSION="7 (Core)"
[2025-10-13 04:58:16] ID="centos"
[2025-10-13 04:58:16] ID_LIKE="rhel fedora"
[2025-10-13 04:58:16] VERSION_ID="7"
[2025-10-13 04:58:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:58:16] ANSI_COLOR="0;31"
[2025-10-13 04:58:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:58:16] HOME_URL="https://www.centos.org/"
[2025-10-13 04:58:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:58:16] 
[2025-10-13 04:58:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:58:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:58:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:58:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:58:16] 
[2025-10-13 04:58:16] 2025-10-13 05:35:10,948 | INFO     | ***************************************
[2025-10-13 04:58:16] 2025-10-13 05:35:11,451 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-10-13 04:58:16] 2025-10-13 05:35:11,474 | INFO     | sufficient remaining disk space (125557538816 B)
[2025-10-13 04:58:16] 2025-10-13 05:35:11,474 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:58:16] 2025-10-13 05:35:11,475 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:58:16] 2025-10-13 05:35:11,475 | INFO     | update_server=False
[2025-10-13 04:58:16] 2025-10-13 05:35:11,475 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:58:16] 2025-10-13 05:35:11,477 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:58:16] 2025-10-13 05:35:11,477 | INFO     | aborting loop
[2025-10-13 04:58:16] 2025-10-13 05:35:11,903 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:58:16] 2025-10-13 05:35:11,947 | INFO     | all data control threads have been joined
[2025-10-13 04:58:16] 2025-10-13 05:35:12,481 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:58:16] 2025-10-13 05:35:12,482 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:58:16] 2025-10-13 05:35:12,776 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:58:16] 2025-10-13 05:35:12,831 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:58:16] 2025-10-13 05:35:12,835 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:58:16] 2025-10-13 05:35:12,869 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:58:16] 2025-10-13 05:35:12,870 | INFO     | all payload control threads have been joined
[2025-10-13 04:58:16] 2025-10-13 05:35:12,926 | INFO     | all job control threads have been joined
[2025-10-13 04:58:16] 2025-10-13 05:35:12,953 | INFO     | [data] control thread has finished
[2025-10-13 04:58:16] 2025-10-13 05:35:13,801 | INFO     | [job] validate thread has finished
[2025-10-13 04:58:16] 2025-10-13 05:35:13,852 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:58:16] 2025-10-13 05:35:13,876 | INFO     | [payload] control thread has finished
[2025-10-13 04:58:16] 2025-10-13 05:35:13,889 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:58:16] 2025-10-13 05:35:13,910 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:58:16] 2025-10-13 05:35:13,922 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:58:16] 2025-10-13 05:35:13,937 | INFO     | [job] control thread has finished
[2025-10-13 04:58:16] 2025-10-13 05:35:14,195 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:58:16] 2025-10-13 05:35:14,976 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:58:16] 2025-10-13 05:35:15,201 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:58:16] 2025-10-13 05:35:17,897 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:58:16] 2025-10-13 05:35:22,005 | INFO     | job.realtimelogging is not enabled
[2025-10-13 04:58:16] 2025-10-13 05:35:23,011 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:58:16] 2025-10-13 05:35:24,091 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140173394777920)>', '<ExcThread(monitor, started 140172758869760)>']
[2025-10-13 04:58:16] 2025-10-13 05:35:29,117 | INFO     | all workflow threads have been joined
[2025-10-13 04:58:16] 2025-10-13 05:35:29,117 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:58:16] 2025-10-13 05:35:29,117 | INFO     | traces error code: 0
[2025-10-13 04:58:16] 2025-10-13 05:35:29,117 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:58:16] 2025-10-13 05:35:41,967 | INFO     | PID=3018633 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 04:58:16] 2025-10-13 05:35:41,969 | INFO     | .. there are 19 such processes running
[2025-10-13 04:58:16] 2025-10-13 05:35:41,969 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:58:16] 2025-10-13 05:35:41,969 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:58:16] 2025-10-13 05:35:41,969 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:58:16] 2025-10-13 05:35:41,969 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:58:16] 2025-10-13 05:35:41,969 | INFO     | [monitor] control thread has ended
[2025-10-13 04:58:16] 2025-10-13 05:35:42,162 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:58:16] 2025-10-13 05:35:42,169 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:58:16] 2025-10-13 05:35:42,174 [wrapper] pilotpid: 3018633
[2025-10-13 04:58:16] 2025-10-13 05:35:42,178 [wrapper] Pilot exit status: 0
[2025-10-13 04:58:16] 2025-10-13 05:35:42,209 [wrapper] pandaids: 6840962115
[2025-10-13 04:58:16] 2025-10-13 05:35:42,314 [wrapper] cleanup supervisor_pilot 3262818 3018636
[2025-10-13 04:58:16] 2025-10-13 05:35:42,319 [wrapper] Test setup, not cleaning
[2025-10-13 04:58:16] 2025-10-13 05:35:42,323 [wrapper] apfmon messages muted
[2025-10-13 04:58:16] 2025-10-13 05:35:42,327 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:58:16] 2025-10-13 05:35:42,331 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:58:16]  *** Error codes and diagnostics ***
[2025-10-13 04:58:16]     "exeErrorCode": 0,
[2025-10-13 04:58:16]     "exeErrorDiag": "",
[2025-10-13 04:58:16]     "pilotErrorCode": 0,
[2025-10-13 04:58:16]     "pilotErrorDiag": "",
[2025-10-13 04:58:16]  *** Listing of results directory ***
[2025-10-13 04:58:16] total 403804
[2025-10-13 04:58:16] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 19:11 pilot3.tar.gz
[2025-10-13 04:58:16] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:17 queuedata.json
[2025-10-13 04:58:16] -rwx------. 1 boincer umatlas     36292 Oct 12 19:18 runpilot2-wrapper.sh
[2025-10-13 04:58:16] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:58:16] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:01 run_atlas
[2025-10-13 04:58:16] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:01 job.xml
[2025-10-13 04:58:16] -rw-r--r--. 2 boincer umatlas 221288353 Oct 13 00:01 EVNT.46676267._004653.pool.root.1
[2025-10-13 04:58:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:01 start_atlas.sh
[2025-10-13 04:58:16] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:01 shared
[2025-10-13 04:58:16] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 00:01 input.tar.gz
[2025-10-13 04:58:16] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:01 boinc_lockfile
[2025-10-13 04:58:16] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 00:01 pandaJob.out
[2025-10-13 04:58:16] -rw-------. 1 boincer umatlas    974373 Oct 13 00:02 agis_schedconf.cvmfs.json
[2025-10-13 04:58:16] -rw-------. 1 boincer umatlas   1560580 Oct 13 00:02 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:58:16] drwx------. 5 boincer umatlas      4096 Oct 13 00:02 pilot3
[2025-10-13 04:58:16] -rw-------. 1 boincer umatlas 185932967 Oct 13 01:30 HITS.46676269._092086.pool.root.1
[2025-10-13 04:58:16] -rw-r--r--. 1 boincer umatlas       530 Oct 13 01:30 boinc_task_state.xml
[2025-10-13 04:58:16] -rw-------. 1 boincer umatlas        95 Oct 13 01:34 pilot_heartbeat.json
[2025-10-13 04:58:16] -rw-------. 1 boincer umatlas      1046 Oct 13 01:34 memory_monitor_summary.json
[2025-10-13 04:58:16] -rw-------. 1 boincer umatlas    399856 Oct 13 01:34 log.46676269._092086.job.log.tgz.1
[2025-10-13 04:58:16] -rw-------. 1 boincer umatlas      7795 Oct 13 01:35 heartbeat.json
[2025-10-13 04:58:16] -rw-------. 1 boincer umatlas       823 Oct 13 01:35 pilotlog.txt
[2025-10-13 04:58:16] -rw-------. 1 boincer umatlas    787295 Oct 13 01:35 log.46676269._092086.job.log.1
[2025-10-13 04:58:16] -rw-------. 1 boincer umatlas       357 Oct 13 01:35 output.list
[2025-10-13 04:58:16] -rw-r--r--. 1 boincer umatlas       620 Oct 13 01:35 runtime_log
[2025-10-13 04:58:16] -rw-------. 1 boincer umatlas   1208320 Oct 13 01:35 result.tar.gz
[2025-10-13 04:58:16] -rw-------. 1 boincer umatlas       655 Oct 13 01:35 zv3LDm8VKS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmT1lNDmSbdcfm.diag
[2025-10-13 04:58:16] -rw-r--r--. 1 boincer umatlas      8700 Oct 13 01:35 runtime_log.err
[2025-10-13 04:58:16] -rw-r--r--. 1 boincer umatlas      6945 Oct 13 04:56 init_data.xml
[2025-10-13 04:58:16] -rw-r--r--. 1 boincer umatlas        27 Oct 13 04:58 wrapper_checkpoint.txt
[2025-10-13 04:58:16] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 04:58 boinc_mmap_file
[2025-10-13 04:58:16] -rw-r--r--. 1 boincer umatlas     22461 Oct 13 04:58 stderr.txt
[2025-10-13 04:58:16] HITS file was successfully produced:
[2025-10-13 04:58:16] -rw-------. 1 boincer umatlas 185932967 Oct 13 01:30 shared/HITS.pool.root.1
[2025-10-13 04:58:16]  *** Contents of shared directory: ***
[2025-10-13 04:58:16] total 399444
[2025-10-13 04:58:16] -rw-r--r--. 2 boincer umatlas 221288353 Oct 13 00:01 ATLAS.root_0
[2025-10-13 04:58:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:01 start_atlas.sh
[2025-10-13 04:58:16] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 00:01 input.tar.gz
[2025-10-13 04:58:16] -rw-------. 1 boincer umatlas 185932967 Oct 13 01:30 HITS.pool.root.1
[2025-10-13 04:58:16] -rw-------. 1 boincer umatlas   1208320 Oct 13 01:35 result.tar.gz
04:58:17 (3004747): run_atlas exited; CPU time 35597.217126
04:58:17 (3004747): called boinc_finish(0)

</stderr_txt>
]]>

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