Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:00:45 (3593320): wrapper (7.7.26015): starting
00:00:45 (3593320): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:00:45] Arguments: --nthreads 12
[2025-10-13 00:00:45] Threads: 12
[2025-10-13 00:00:45] Checking for CVMFS
[2025-10-13 00:00:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:00:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:00:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:00:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:00:47] 2.13.2.0 1969590 130194 297124 151647 2 723 30385145 32935936 19485 16776704 0 94714922 99.700 78627796 29734 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:00:47] CVMFS is ok
[2025-10-13 00:00:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:00:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:00:47] Further information can be found at the LHC@home message board.
[2025-10-13 00:00:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:00:47] Checking for apptainer binary...
[2025-10-13 00:00:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:00:47] Running /usr/bin/apptainer --version
[2025-10-13 00:00:47] apptainer version 1.4.3-1.el9
[2025-10-13 00:00:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:00:49] c-8-36.aglt2.org
[2025-10-13 00:00:49] apptainer works
[2025-10-13 00:00:49] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:00:49] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:00:49] Starting ATLAS job with PandaID=6840712965
[2025-10-13 00:00:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:17:18]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:17:18] 2025-10-13 13:16:44,925 | INFO     | intersect: -13317548697.70399
[2025-10-13 09:17:18] 2025-10-13 13:16:44,926 | INFO     | chi2: 7.160873507857639
[2025-10-13 09:17:18] 2025-10-13 13:16:44,926 | INFO     | current chi2=7.160873507857639 (change=0.3632022498253093 %)
[2025-10-13 09:17:18] 2025-10-13 13:16:44,926 | INFO     | right removable region: 534
[2025-10-13 09:17:18] 2025-10-13 13:16:44,927 | INFO     | sum of square deviations: 47475399582.95332
[2025-10-13 09:17:18] 2025-10-13 13:16:44,933 | INFO     | sum of deviations: 195526810157.85025
[2025-10-13 09:17:18] 2025-10-13 13:16:44,934 | INFO     | mean x: 1760345021.0093458
[2025-10-13 09:17:18] 2025-10-13 13:16:44,934 | INFO     | mean y: 2354698.429906542
[2025-10-13 09:17:18] 2025-10-13 13:16:44,934 | INFO     | -- intersect: -7247603169.40864
[2025-10-13 09:17:18] 2025-10-13 13:16:44,934 | INFO     | intersect: -7247603169.40864
[2025-10-13 09:17:18] 2025-10-13 13:16:44,935 | INFO     | chi2: 3.3628200632430523
[2025-10-13 09:17:18] 2025-10-13 13:16:44,935 | INFO     | current chi2=3.3628200632430523 (change=53.20953202930968 %)
[2025-10-13 09:17:18] 2025-10-13 13:16:44,936 | INFO     | sum of square deviations: 46156205422.13013
[2025-10-13 09:17:18] 2025-10-13 13:16:44,942 | INFO     | sum of deviations: 74094819115.27167
[2025-10-13 09:17:18] 2025-10-13 13:16:44,942 | INFO     | mean x: 1760345173.526415
[2025-10-13 09:17:18] 2025-10-13 13:16:44,942 | INFO     | mean y: 2368734.837735849
[2025-10-13 09:17:18] 2025-10-13 13:16:44,942 | INFO     | -- intersect: -2823523385.625527
[2025-10-13 09:17:18] 2025-10-13 13:16:44,943 | INFO     | intersect: -2823523385.625527
[2025-10-13 09:17:18] 2025-10-13 13:16:44,943 | INFO     | chi2: 1.3110501308829452
[2025-10-13 09:17:18] 2025-10-13 13:16:44,943 | INFO     | current chi2=1.3110501308829452 (change=61.01337251989069 %)
[2025-10-13 09:17:18] 2025-10-13 13:16:44,944 | INFO     | sum of square deviations: 44861727794.15974
[2025-10-13 09:17:18] 2025-10-13 13:16:44,951 | INFO     | sum of deviations: -3589085447.3600173
[2025-10-13 09:17:18] 2025-10-13 13:16:44,951 | INFO     | mean x: 1760345326.04
[2025-10-13 09:17:18] 2025-10-13 13:16:44,952 | INFO     | mean y: 2377876.017142857
[2025-10-13 09:17:18] 2025-10-13 13:16:44,952 | INFO     | -- intersect: 143211279.06857178
[2025-10-13 09:17:18] 2025-10-13 13:16:44,952 | INFO     | intersect: 143211279.06857178
[2025-10-13 09:17:18] 2025-10-13 13:16:44,952 | INFO     | chi2: 0.42796989122737156
[2025-10-13 09:17:18] 2025-10-13 13:16:44,953 | INFO     | current chi2=0.42796989122737156 (change=67.35671038458696 %)
[2025-10-13 09:17:18] 2025-10-13 13:16:44,953 | INFO     | sum of square deviations: 43591668130.49231
[2025-10-13 09:17:18] 2025-10-13 13:16:44,959 | INFO     | sum of deviations: -30061381975.89232
[2025-10-13 09:17:18] 2025-10-13 13:16:44,960 | INFO     | mean x: 1760345478.5538461
[2025-10-13 09:17:18] 2025-10-13 13:16:44,960 | INFO     | mean y: 2381045.2461538464
[2025-10-13 09:17:18] 2025-10-13 13:16:44,960 | INFO     | -- intersect: 1216338209.7650719
[2025-10-13 09:17:18] 2025-10-13 13:16:44,960 | INFO     | intersect: 1216338209.7650719
[2025-10-13 09:17:18] 2025-10-13 13:16:44,961 | INFO     | chi2: 0.29321740694146964
[2025-10-13 09:17:18] 2025-10-13 13:16:44,961 | INFO     | current chi2=0.29321740694146964 (change=31.486440295939115 %)
[2025-10-13 09:17:18] 2025-10-13 13:16:44,962 | INFO     | sum of square deviations: 42345826313.75545
[2025-10-13 09:17:18] 2025-10-13 13:16:44,968 | INFO     | sum of deviations: -30116521322.15522
[2025-10-13 09:17:18] 2025-10-13 13:16:44,968 | INFO     | mean x: 1760345631.0660195
[2025-10-13 09:17:18] 2025-10-13 13:16:44,968 | INFO     | mean y: 2381051.5339805824
[2025-10-13 09:17:18] 2025-10-13 13:16:44,973 | INFO     | -- intersect: 1254345916.7264028
[2025-10-13 09:17:18] 2025-10-13 13:16:44,973 | INFO     | intersect: 1254345916.7264028
[2025-10-13 09:17:18] 2025-10-13 13:16:44,974 | INFO     | chi2: 0.29240297362388584
[2025-10-13 09:17:18] 2025-10-13 13:16:44,974 | INFO     | current chi2=0.29240297362388584 (change=0.27775749266699173 %)
[2025-10-13 09:17:18] 2025-10-13 13:16:44,974 | INFO     | left removable region: 50
[2025-10-13 09:17:18] 2025-10-13 13:16:44,975 | INFO     | sum of square deviations: 35150145718.99776
[2025-10-13 09:17:18] 2025-10-13 13:16:44,988 | INFO     | sum of deviations: -19395040618.768574
[2025-10-13 09:17:18] 2025-10-13 13:16:44,988 | INFO     | mean x: 1760346210.5020661
[2025-10-13 09:17:18] 2025-10-13 13:16:44,988 | INFO     | mean y: 2380587.7685950412
[2025-10-13 09:17:18] 2025-10-13 13:16:44,988 | INFO     | -- intersect: 973699071.8717786
[2025-10-13 09:17:18] 2025-10-13 13:16:44,989 | INFO     | intersect: 973699071.8717786
[2025-10-13 09:17:18] 2025-10-13 13:16:44,989 | INFO     | chi2: 0.26209323905350806
[2025-10-13 09:17:18] 2025-10-13 13:16:44,990 | INFO     | -- intersect: 973699071.8717786
[2025-10-13 09:17:18] 2025-10-13 13:16:44,990 | INFO     | current memory leak: -0.55 B/s (using 484 data points, chi2=0.26)
[2025-10-13 09:17:18] 2025-10-13 13:16:44,990 | INFO     | could have reported an average CPU frequency of 2601 MHz (21 samples)
[2025-10-13 09:17:18] 2025-10-13 13:16:44,991 | INFO     | ..............................
[2025-10-13 09:17:18] 2025-10-13 13:16:44,991 | INFO     | . Timing measurements:
[2025-10-13 09:17:18] 2025-10-13 13:16:44,991 | INFO     | . get job = 1 s
[2025-10-13 09:17:18] 2025-10-13 13:16:44,991 | INFO     | . initial setup = 12 s
[2025-10-13 09:17:18] 2025-10-13 13:16:44,991 | INFO     | . payload setup = 84 s
[2025-10-13 09:17:18] 2025-10-13 13:16:44,991 | INFO     | . stage-in = 0 s
[2025-10-13 09:17:18] 2025-10-13 13:16:44,995 | INFO     | . payload execution = 32990 s
[2025-10-13 09:17:18] 2025-10-13 13:16:44,996 | INFO     | . stage-out = 4 s
[2025-10-13 09:17:18] 2025-10-13 13:16:44,996 | INFO     | . log creation = 1 s
[2025-10-13 09:17:18] 2025-10-13 13:16:44,996 | INFO     | ..............................
[2025-10-13 09:17:18] 2025-10-13 13:16:45,109 | INFO     | 
[2025-10-13 09:17:18] 2025-10-13 13:16:45,109 | INFO     | job summary report
[2025-10-13 09:17:18] 2025-10-13 13:16:45,109 | INFO     | --------------------------------------------------
[2025-10-13 09:17:18] 2025-10-13 13:16:45,109 | INFO     | PanDA job id: 6840712965
[2025-10-13 09:17:18] 2025-10-13 13:16:45,109 | INFO     | task id: 46676269
[2025-10-13 09:17:18] 2025-10-13 13:16:45,109 | INFO     | errors: (none)
[2025-10-13 09:17:18] 2025-10-13 13:16:45,110 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:17:18] 2025-10-13 13:16:45,110 | INFO     | pilot state: finished 
[2025-10-13 09:17:18] 2025-10-13 13:16:45,110 | INFO     | transexitcode: 0
[2025-10-13 09:17:18] 2025-10-13 13:16:45,110 | INFO     | exeerrorcode: 0
[2025-10-13 09:17:18] 2025-10-13 13:16:45,110 | INFO     | exeerrordiag: 
[2025-10-13 09:17:18] 2025-10-13 13:16:45,110 | INFO     | exitcode: 0
[2025-10-13 09:17:18] 2025-10-13 13:16:45,110 | INFO     | exitmsg: OK
[2025-10-13 09:17:18] 2025-10-13 13:16:45,110 | INFO     | cpuconsumptiontime: 51827 s
[2025-10-13 09:17:18] 2025-10-13 13:16:45,110 | INFO     | nevents: 400
[2025-10-13 09:17:18] 2025-10-13 13:16:45,110 | INFO     | neventsw: 0
[2025-10-13 09:17:18] 2025-10-13 13:16:45,111 | INFO     | pid: 3610626
[2025-10-13 09:17:18] 2025-10-13 13:16:45,111 | INFO     | pgrp: 3610626
[2025-10-13 09:17:18] 2025-10-13 13:16:45,111 | INFO     | corecount: 12
[2025-10-13 09:17:18] 2025-10-13 13:16:45,111 | INFO     | event service: False
[2025-10-13 09:17:18] 2025-10-13 13:16:45,111 | INFO     | sizes: {0: 2348029, 2: 2348630, 3: 2348714, 6: 2348770, 7: 2348770, 8: 2348941, 10: 2349097, 22: 2349125, 33: 2349153, 45: 2349209, 57: 2349237, 64: 2349807, 68: 2
[2025-10-13 09:17:18] 2025-10-13 13:16:45,111 | INFO     | --------------------------------------------------
[2025-10-13 09:17:18] 2025-10-13 13:16:45,111 | INFO     | 
[2025-10-13 09:17:18] 2025-10-13 13:16:45,111 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 09:17:18] 2025-10-13 13:16:45,132 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:17:18] 2025-10-13 13:16:45,132 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:17:18] 2025-10-13 13:16:45,133 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:17:18] 2025-10-13 13:16:45,133 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:17:18] 2025-10-13 13:16:45,133 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:17:18] 2025-10-13 13:16:45,133 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:17:18] 2025-10-13 13:16:45,133 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:17:18] 2025-10-13 13:16:45,133 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:17:18] 2025-10-13 13:16:45,133 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:17:18] 2025-10-13 13:16:45,133 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:17:18] 2025-10-13 13:16:45,133 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:17:18] 2025-10-13 13:16:45,134 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:17:18] 2025-10-13 13:16:45,134 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:17:18] 2025-10-13 13:16:45,134 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:17:18] 2025-10-13 13:16:45,134 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:17:18] 2025-10-13 13:16:45,134 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:17:18] 2025-10-13 13:16:45,134 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:17:18] 2025-10-13 13:16:45,134 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:17:18] 2025-10-13 13:16:45,134 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:17:18] 2025-10-13 13:16:45,134 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:17:18] 2025-10-13 13:16:45,135 | INFO     | job 6840712965 has completed (purged errors)
[2025-10-13 09:17:18] 2025-10-13 13:16:45,135 | INFO     | overall cleanup function is called
[2025-10-13 09:17:18] 2025-10-13 13:16:46,144 | INFO     | --- collectZombieJob: --- 10, [3610626]
[2025-10-13 09:17:18] 2025-10-13 13:16:46,145 | INFO     | zombie collector waiting for pid 3610626
[2025-10-13 09:17:18] 2025-10-13 13:16:46,145 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:17:18] 2025-10-13 13:16:46,145 | INFO     | collected zombie processes
[2025-10-13 09:17:18] 2025-10-13 13:16:46,145 | INFO     | will attempt to kill all subprocesses of pid=3610626
[2025-10-13 09:17:18] 2025-10-13 13:16:46,633 | INFO     | process IDs to be killed: [3610626] (in reverse order)
[2025-10-13 09:17:18] 2025-10-13 13:16:46,729 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:17:18] 2025-10-13 13:16:46,729 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:17:18] 2025-10-13 13:16:46,741 | INFO     | did not find any defunct processes belonging to 3610626
[2025-10-13 09:17:18] 2025-10-13 13:16:46,752 | INFO     | did not find any defunct processes belonging to 3610626
[2025-10-13 09:17:18] 2025-10-13 13:16:46,753 | INFO     | ready for new job
[2025-10-13 09:17:18] 2025-10-13 13:16:46,753 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:17:18] 2025-10-13 13:16:46,756 | INFO     | ***************************************
[2025-10-13 09:17:18] 2025-10-13 13:16:46,757 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:17:18] 2025-10-13 13:16:46,757 | INFO     | ***************************************
[2025-10-13 09:17:18] 2025-10-13 13:16:46,757 | INFO     | 
[2025-10-13 09:17:18] 2025-10-13 13:16:46,770 | INFO     | architecture information:
[2025-10-13 09:17:18] 2025-10-13 13:16:46,771 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:17:18] 2025-10-13 13:16:46,788 | INFO     | cat /etc/os-release:
[2025-10-13 09:17:18] NAME="CentOS Linux"
[2025-10-13 09:17:18] VERSION="7 (Core)"
[2025-10-13 09:17:18] ID="centos"
[2025-10-13 09:17:18] ID_LIKE="rhel fedora"
[2025-10-13 09:17:18] VERSION_ID="7"
[2025-10-13 09:17:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:17:18] ANSI_COLOR="0;31"
[2025-10-13 09:17:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:17:18] HOME_URL="https://www.centos.org/"
[2025-10-13 09:17:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:17:18] 
[2025-10-13 09:17:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:17:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:17:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:17:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:17:18] 
[2025-10-13 09:17:18] 2025-10-13 13:16:46,789 | INFO     | ***************************************
[2025-10-13 09:17:18] 2025-10-13 13:16:47,292 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 09:17:18] 2025-10-13 13:16:47,356 | INFO     | sufficient remaining disk space (75718721536 B)
[2025-10-13 09:17:18] 2025-10-13 13:16:47,356 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:17:18] 2025-10-13 13:16:47,357 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:17:18] 2025-10-13 13:16:47,357 | INFO     | update_server=False
[2025-10-13 09:17:18] 2025-10-13 13:16:47,357 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:17:18] 2025-10-13 13:16:47,359 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:17:18] 2025-10-13 13:16:47,709 | INFO     | all data control threads have been joined
[2025-10-13 09:17:18] 2025-10-13 13:16:47,764 | INFO     | all payload control threads have been joined
[2025-10-13 09:17:18] 2025-10-13 13:16:48,011 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:17:18] 2025-10-13 13:16:48,011 | INFO     | aborting loop
[2025-10-13 09:17:18] 2025-10-13 13:16:48,363 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:17:18] 2025-10-13 13:16:48,518 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:17:18] 2025-10-13 13:16:48,717 | INFO     | [data] control thread has finished
[2025-10-13 09:17:18] 2025-10-13 13:16:48,774 | INFO     | [payload] control thread has finished
[2025-10-13 09:17:18] 2025-10-13 13:16:48,786 | INFO     | [job] validate thread has finished
[2025-10-13 09:17:18] 2025-10-13 13:16:48,976 | INFO     | all job control threads have been joined
[2025-10-13 09:17:18] 2025-10-13 13:16:49,017 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:17:18] 2025-10-13 13:16:49,169 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:17:18] 2025-10-13 13:16:49,365 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:17:18] 2025-10-13 13:16:49,787 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:17:18] 2025-10-13 13:16:49,793 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:17:18] 2025-10-13 13:16:49,806 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:17:18] 2025-10-13 13:16:49,859 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:17:18] 2025-10-13 13:16:49,966 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:17:18] 2025-10-13 13:16:49,983 | INFO     | [job] control thread has finished
[2025-10-13 09:17:18] 2025-10-13 13:16:50,100 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:17:18] 2025-10-13 13:16:50,128 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:17:18] 2025-10-13 13:16:50,430 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:17:18] 2025-10-13 13:16:51,134 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:17:18] 2025-10-13 13:16:54,440 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:17:18] 2025-10-13 13:16:56,211 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139661447948096)>', '<ExcThread(monitor, started 139660961494784)>']
[2025-10-13 09:17:18] 2025-10-13 13:17:01,237 | INFO     | all workflow threads have been joined
[2025-10-13 09:17:18] 2025-10-13 13:17:01,237 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:17:18] 2025-10-13 13:17:01,237 | INFO     | traces error code: 0
[2025-10-13 09:17:18] 2025-10-13 13:17:01,238 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:17:18] 2025-10-13 13:17:17,321 | INFO     | PID=3598599 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 09:17:18] 2025-10-13 13:17:17,321 | INFO     | .. there are 17 such processes running
[2025-10-13 09:17:18] 2025-10-13 13:17:17,321 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:17:18] 2025-10-13 13:17:17,321 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:17:18] 2025-10-13 13:17:17,322 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:17:18] 2025-10-13 13:17:17,322 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:17:18] 2025-10-13 13:17:17,322 | INFO     | [monitor] control thread has ended
[2025-10-13 09:17:18] 2025-10-13 13:17:17,716 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:17:18] 2025-10-13 13:17:17,744 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:17:18] 2025-10-13 13:17:17,747 [wrapper] pilotpid: 3598599
[2025-10-13 09:17:18] 2025-10-13 13:17:17,778 [wrapper] Pilot exit status: 0
[2025-10-13 09:17:18] 2025-10-13 13:17:17,859 [wrapper] pandaids: 6840712965
[2025-10-13 09:17:18] 2025-10-13 13:17:17,932 [wrapper] cleanup supervisor_pilot  742209 3598600
[2025-10-13 09:17:18] 2025-10-13 13:17:17,937 [wrapper] Test setup, not cleaning
[2025-10-13 09:17:18] 2025-10-13 13:17:17,958 [wrapper] apfmon messages muted
[2025-10-13 09:17:18] 2025-10-13 13:17:17,981 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:17:18] 2025-10-13 13:17:18,003 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:17:18]  *** Error codes and diagnostics ***
[2025-10-13 09:17:18]     "exeErrorCode": 0,
[2025-10-13 09:17:18]     "exeErrorDiag": "",
[2025-10-13 09:17:18]     "pilotErrorCode": 0,
[2025-10-13 09:17:18]     "pilotErrorDiag": "",
[2025-10-13 09:17:18]  *** Listing of results directory ***
[2025-10-13 09:17:18] total 416116
[2025-10-13 09:17:18] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 14:53 pilot3.tar.gz
[2025-10-13 09:17:18] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 15:25 queuedata.json
[2025-10-13 09:17:18] -rwx------. 1 boincer umatlas     36292 Oct 12 15:26 runpilot2-wrapper.sh
[2025-10-13 09:17:18] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:17:18] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:00 run_atlas
[2025-10-13 09:17:18] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:00 job.xml
[2025-10-13 09:17:18] -rw-r--r--. 2 boincer umatlas 220839248 Oct 13 00:00 EVNT.46676267._004453.pool.root.1
[2025-10-13 09:17:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:00 start_atlas.sh
[2025-10-13 09:17:18] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:00 shared
[2025-10-13 09:17:18] -rw-r--r--. 2 boincer umatlas    569686 Oct 13 00:00 input.tar.gz
[2025-10-13 09:17:18] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:00 boinc_lockfile
[2025-10-13 09:17:18] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 00:00 pandaJob.out
[2025-10-13 09:17:18] -rw-------. 1 boincer umatlas    974373 Oct 13 00:02 agis_schedconf.cvmfs.json
[2025-10-13 09:17:18] drwx------. 5 boincer umatlas      4096 Oct 13 00:02 pilot3
[2025-10-13 09:17:18] -rw-r--r--. 1 boincer umatlas      6659 Oct 13 09:10 init_data.xml
[2025-10-13 09:17:18] -rw-------. 1 boincer umatlas 192677564 Oct 13 09:15 HITS.46676269._087478.pool.root.1
[2025-10-13 09:17:18] -rw-r--r--. 1 boincer umatlas       531 Oct 13 09:15 boinc_task_state.xml
[2025-10-13 09:17:18] -rw-------. 1 boincer umatlas      1039 Oct 13 09:16 memory_monitor_summary.json
[2025-10-13 09:17:18] -rw-------. 1 boincer umatlas   1560580 Oct 13 09:16 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:17:18] -rw-------. 1 boincer umatlas    735626 Oct 13 09:16 log.46676269._087478.job.log.tgz.1
[2025-10-13 09:17:18] -rw-------. 1 boincer umatlas        95 Oct 13 09:16 pilot_heartbeat.json
[2025-10-13 09:17:18] -rw-------. 1 boincer umatlas      7824 Oct 13 09:16 heartbeat.json
[2025-10-13 09:17:18] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 09:17 boinc_mmap_file
[2025-10-13 09:17:18] -rw-r--r--. 1 boincer umatlas        28 Oct 13 09:17 wrapper_checkpoint.txt
[2025-10-13 09:17:18] -rw-------. 1 boincer umatlas       823 Oct 13 09:17 pilotlog.txt
[2025-10-13 09:17:18] -rw-------. 1 boincer umatlas   3610869 Oct 13 09:17 log.46676269._087478.job.log.1
[2025-10-13 09:17:18] -rw-------. 1 boincer umatlas       357 Oct 13 09:17 output.list
[2025-10-13 09:17:18] -rw-r--r--. 1 boincer umatlas       620 Oct 13 09:17 runtime_log
[2025-10-13 09:17:18] -rw-------. 1 boincer umatlas   4362240 Oct 13 09:17 result.tar.gz
[2025-10-13 09:17:18] -rw-------. 1 boincer umatlas       655 Oct 13 09:17 9soKDmqsGS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmToUMDmDVinwn.diag
[2025-10-13 09:17:18] -rw-r--r--. 1 boincer umatlas      8696 Oct 13 09:17 runtime_log.err
[2025-10-13 09:17:18] -rw-r--r--. 1 boincer umatlas     21063 Oct 13 09:17 stderr.txt
[2025-10-13 09:17:18] HITS file was successfully produced:
[2025-10-13 09:17:18] -rw-------. 1 boincer umatlas 192677564 Oct 13 09:15 shared/HITS.pool.root.1
[2025-10-13 09:17:18]  *** Contents of shared directory: ***
[2025-10-13 09:17:18] total 408672
[2025-10-13 09:17:18] -rw-r--r--. 2 boincer umatlas 220839248 Oct 13 00:00 ATLAS.root_0
[2025-10-13 09:17:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:00 start_atlas.sh
[2025-10-13 09:17:18] -rw-r--r--. 2 boincer umatlas    569686 Oct 13 00:00 input.tar.gz
[2025-10-13 09:17:18] -rw-------. 1 boincer umatlas 192677564 Oct 13 09:15 HITS.pool.root.1
[2025-10-13 09:17:18] -rw-------. 1 boincer umatlas   4362240 Oct 13 09:17 result.tar.gz
09:17:19 (3593320): run_atlas exited; CPU time 52895.545865
09:17:19 (3593320): called boinc_finish(0)

</stderr_txt>
]]>

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