Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:58:05 (21891): wrapper (7.7.26015): starting
23:58:05 (21891): wrapper: running run_atlas (--nthreads 12)
[2025-10-12 23:58:05] Arguments: --nthreads 12
[2025-10-12 23:58:05] Threads: 12
[2025-10-12 23:58:05] Checking for CVMFS
[2025-10-12 23:58:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-12 23:58:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-12 23:58:05] Running cvmfs_config stat atlas.cern.ch
[2025-10-12 23:58:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-12 23:58:05] 2.11.2.0 2979 223825 97372 151647 3 57 16022485 20275200 1 130560 1 109343735 99.984 13163373 12363 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-12 23:58:05] CVMFS is ok
[2025-10-12 23:58:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 23:58:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 23:58:05] Further information can be found at the LHC@home message board.
[2025-10-12 23:58:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 23:58:05] Checking for apptainer binary...
[2025-10-12 23:58:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-12 23:58:05] Running /usr/bin/apptainer --version
[2025-10-12 23:58:05] apptainer version 1.3.2-1.el7
[2025-10-12 23:58:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 23:58:07] c-205-21.aglt2.org
[2025-10-12 23:58:07] apptainer works
[2025-10-12 23:58:07] Set ATHENA_PROC_NUMBER=12
[2025-10-12 23:58:07] Set ATHENA_CORE_NUMBER=12
[2025-10-12 23:58:07] Starting ATLAS job with PandaID=6840750032
[2025-10-12 23:58:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 01:07:50]  *** The last 200 lines of the pilot log: ***
[2025-10-13 01:07:50]  status=None
[2025-10-13 01:07:50]  status_code=0
[2025-10-13 01:07:50]  storage_token=
[2025-10-13 01:07:50]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840750032/log.46676269._089411.job.log.tgz.1
[2025-10-13 01:07:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/2b/log.46676269._089411.job.log.tgz.1
[2025-10-13 01:07:50]  workdir=None
[2025-10-13 01:07:50] ]
[2025-10-13 01:07:50] 2025-10-13 05:07:08,089 | INFO     | transferring file log.46676269._089411.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840750032/log.46676269._089411.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 01:07:50] 2025-10-13 05:07:08,089 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840750032/log.46676269._089411.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._089411.job
[2025-10-13 01:07:50] 2025-10-13 05:07:08,158 | INFO     | adding to output.list: log.46676269._089411.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/2b/log.46676269._089411.job.log.tg
[2025-10-13 01:07:50] 2025-10-13 05:07:08,159 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 01:07:50] 2025-10-13 05:07:08,160 | INFO     | summary of transferred files:
[2025-10-13 01:07:50] 2025-10-13 05:07:08,160 | INFO     |  -- lfn=log.46676269._089411.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 01:07:50] 2025-10-13 05:07:08,160 | INFO     | stage-out finished correctly
[2025-10-13 01:07:50] 2025-10-13 05:07:08,552 | INFO     | time since job start (4126s) is within the limit (172800.0s)
[2025-10-13 01:07:50] 2025-10-13 05:07:09,669 | INFO     | PID=25675 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 01:07:50] 2025-10-13 05:07:10,670 | INFO     | time since job start (4128s) is within the limit (172800.0s)
[2025-10-13 01:07:50] 2025-10-13 05:07:11,587 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 01:07:50] 2025-10-13 05:07:12,383 | INFO     | job 6840750032 has state=finished
[2025-10-13 01:07:50] 2025-10-13 05:07:12,383 | INFO     | preparing for final server update for job 6840750032 in state='finished'
[2025-10-13 01:07:50] 2025-10-13 05:07:12,384 | INFO     | this job has now completed (state=finished)
[2025-10-13 01:07:50] 2025-10-13 05:07:12,384 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 01:07:50] 2025-10-13 05:07:12,384 | INFO     | log transfer has been attempted: DONE
[2025-10-13 01:07:50] 2025-10-13 05:07:12,384 | INFO     | job 6840750032 has finished - writing final server update
[2025-10-13 01:07:50] 2025-10-13 05:07:12,385 | INFO     | total number of processed events: 400 (read)
[2025-10-13 01:07:50] 2025-10-13 05:07:12,386 | INFO     | executing command: lscpu
[2025-10-13 01:07:50] 2025-10-13 05:07:12,413 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 01:07:50] 2025-10-13 05:07:12,675 | INFO     | time since job start (4130s) is within the limit (172800.0s)
[2025-10-13 01:07:50] 2025-10-13 05:07:12,989 | WARNING  | process 476 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 01:07:50] 2025-10-13 05:07:12,989 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840750032/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 01:07:50] 2025-10-13 05:07:13,078 | INFO     | number of running child processes to parent process 476: 1
[2025-10-13 01:07:50] 2025-10-13 05:07:13,078 | INFO     | maximum number of monitored processes: 6
[2025-10-13 01:07:50] 2025-10-13 05:07:14,681 | INFO     | time since job start (4132s) is within the limit (172800.0s)
[2025-10-13 01:07:50] 2025-10-13 05:07:15,580 | INFO     | monitor loop #307: job 0:6840750032 is in state 'finished'
[2025-10-13 01:07:50] 2025-10-13 05:07:15,581 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 01:07:50] 2025-10-13 05:07:16,684 | INFO     | time since job start (4134s) is within the limit (172800.0s)
[2025-10-13 01:07:50] 2025-10-13 05:07:17,056 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 01:07:50] 2025-10-13 05:07:17,060 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-10-13 01:07:50] 2025-10-13 05:07:17,062 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840750032/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 01:07:50] 2025-10-13 05:07:17,062 | INFO     | extracted standard info from prmon json
[2025-10-13 01:07:50] 2025-10-13 05:07:17,062 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 01:07:50] 2025-10-13 05:07:17,062 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 01:07:50] 2025-10-13 05:07:17,063 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 01:07:50] 2025-10-13 05:07:17,063 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 01:07:50] 2025-10-13 05:07:17,064 | INFO     | fitting pss+swap vs Time
[2025-10-13 01:07:50] 2025-10-13 05:07:17,064 | INFO     | sum of square deviations: 70364110.0
[2025-10-13 01:07:50] 2025-10-13 05:07:17,065 | INFO     | sum of deviations: -1078735162.9999993
[2025-10-13 01:07:50] 2025-10-13 05:07:17,065 | INFO     | mean x: 1760330066.0
[2025-10-13 01:07:50] 2025-10-13 05:07:17,065 | INFO     | mean y: 2686106.1967213117
[2025-10-13 01:07:50] 2025-10-13 05:07:17,065 | INFO     | -- intersect: 26989880866.143368
[2025-10-13 01:07:50] 2025-10-13 05:07:17,065 | INFO     | intersect: 26989880866.143368
[2025-10-13 01:07:50] 2025-10-13 05:07:17,065 | INFO     | chi2: 0.036561899607317566
[2025-10-13 01:07:50] 2025-10-13 05:07:17,065 | INFO     | -- intersect: 26989880866.143368
[2025-10-13 01:07:50] 2025-10-13 05:07:17,066 | INFO     | current memory leak: -15.33 B/s (using 61 data points, chi2=0.04)
[2025-10-13 01:07:50] 2025-10-13 05:07:17,066 | INFO     | could have reported an average CPU frequency of 2030 MHz (6 samples)
[2025-10-13 01:07:50] 2025-10-13 05:07:17,066 | INFO     | ..............................
[2025-10-13 01:07:50] 2025-10-13 05:07:17,066 | INFO     | . Timing measurements:
[2025-10-13 01:07:50] 2025-10-13 05:07:17,066 | INFO     | . get job = 0 s
[2025-10-13 01:07:50] 2025-10-13 05:07:17,066 | INFO     | . initial setup = 3 s
[2025-10-13 01:07:50] 2025-10-13 05:07:17,066 | INFO     | . payload setup = 7 s
[2025-10-13 01:07:50] 2025-10-13 05:07:17,067 | INFO     | . stage-in = 0 s
[2025-10-13 01:07:50] 2025-10-13 05:07:17,067 | INFO     | . payload execution = 4097 s
[2025-10-13 01:07:50] 2025-10-13 05:07:17,067 | INFO     | . stage-out = 0 s
[2025-10-13 01:07:50] 2025-10-13 05:07:17,067 | INFO     | . log creation = 0 s
[2025-10-13 01:07:50] 2025-10-13 05:07:17,067 | INFO     | ..............................
[2025-10-13 01:07:50] 2025-10-13 05:07:17,539 | INFO     | 
[2025-10-13 01:07:50] 2025-10-13 05:07:17,539 | INFO     | job summary report
[2025-10-13 01:07:50] 2025-10-13 05:07:17,539 | INFO     | --------------------------------------------------
[2025-10-13 01:07:50] 2025-10-13 05:07:17,539 | INFO     | PanDA job id: 6840750032
[2025-10-13 01:07:50] 2025-10-13 05:07:17,540 | INFO     | task id: 46676269
[2025-10-13 01:07:50] 2025-10-13 05:07:17,540 | INFO     | errors: (none)
[2025-10-13 01:07:50] 2025-10-13 05:07:17,540 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 01:07:50] 2025-10-13 05:07:17,540 | INFO     | pilot state: finished 
[2025-10-13 01:07:50] 2025-10-13 05:07:17,540 | INFO     | transexitcode: 0
[2025-10-13 01:07:50] 2025-10-13 05:07:17,540 | INFO     | exeerrorcode: 0
[2025-10-13 01:07:50] 2025-10-13 05:07:17,541 | INFO     | exeerrordiag: 
[2025-10-13 01:07:50] 2025-10-13 05:07:17,541 | INFO     | exitcode: 0
[2025-10-13 01:07:50] 2025-10-13 05:07:17,541 | INFO     | exitmsg: OK
[2025-10-13 01:07:50] 2025-10-13 05:07:17,541 | INFO     | cpuconsumptiontime: 44294 s
[2025-10-13 01:07:50] 2025-10-13 05:07:17,541 | INFO     | nevents: 400
[2025-10-13 01:07:50] 2025-10-13 05:07:17,541 | INFO     | neventsw: 0
[2025-10-13 01:07:50] 2025-10-13 05:07:17,542 | INFO     | pid: 476
[2025-10-13 01:07:50] 2025-10-13 05:07:17,542 | INFO     | pgrp: 476
[2025-10-13 01:07:50] 2025-10-13 05:07:17,542 | INFO     | corecount: 12
[2025-10-13 01:07:50] 2025-10-13 05:07:17,542 | INFO     | event service: False
[2025-10-13 01:07:50] 2025-10-13 05:07:17,542 | INFO     | sizes: {0: 2348857, 1: 2348857, 5: 2349147, 11: 2349203, 4108: 2375070, 4109: 2384068, 4113: 2384252, 4118: 2384446}
[2025-10-13 01:07:50] 2025-10-13 05:07:17,542 | INFO     | --------------------------------------------------
[2025-10-13 01:07:50] 2025-10-13 05:07:17,543 | INFO     | 
[2025-10-13 01:07:50] 2025-10-13 05:07:17,543 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 01:07:50] 2025-10-13 05:07:17,578 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 01:07:50] 2025-10-13 05:07:17,579 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 01:07:50] 2025-10-13 05:07:17,579 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 01:07:50] 2025-10-13 05:07:17,579 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 01:07:50] 2025-10-13 05:07:17,579 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 01:07:50] 2025-10-13 05:07:17,579 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 01:07:50] 2025-10-13 05:07:17,579 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 01:07:50] 2025-10-13 05:07:17,579 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 01:07:50] 2025-10-13 05:07:17,579 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 01:07:50] 2025-10-13 05:07:17,579 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 01:07:50] 2025-10-13 05:07:17,580 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 01:07:50] 2025-10-13 05:07:17,580 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 01:07:50] 2025-10-13 05:07:17,580 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 01:07:50] 2025-10-13 05:07:17,580 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 01:07:50] 2025-10-13 05:07:17,580 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 01:07:50] 2025-10-13 05:07:17,580 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 01:07:50] 2025-10-13 05:07:17,580 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 01:07:50] 2025-10-13 05:07:17,580 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 01:07:50] 2025-10-13 05:07:17,581 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 01:07:50] 2025-10-13 05:07:17,581 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 01:07:50] 2025-10-13 05:07:17,581 | INFO     | job 6840750032 has completed (purged errors)
[2025-10-13 01:07:50] 2025-10-13 05:07:17,581 | INFO     | overall cleanup function is called
[2025-10-13 01:07:50] 2025-10-13 05:07:18,588 | INFO     | --- collectZombieJob: --- 10, [476]
[2025-10-13 01:07:50] 2025-10-13 05:07:18,589 | INFO     | zombie collector waiting for pid 476
[2025-10-13 01:07:50] 2025-10-13 05:07:18,589 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 01:07:50] 2025-10-13 05:07:18,589 | INFO     | collected zombie processes
[2025-10-13 01:07:50] 2025-10-13 05:07:18,589 | INFO     | will attempt to kill all subprocesses of pid=476
[2025-10-13 01:07:50] 2025-10-13 05:07:18,681 | INFO     | process IDs to be killed: [476] (in reverse order)
[2025-10-13 01:07:50] 2025-10-13 05:07:18,732 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 01:07:50] 2025-10-13 05:07:18,732 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 01:07:50] 2025-10-13 05:07:18,735 | INFO     | did not find any defunct processes belonging to 476
[2025-10-13 01:07:50] 2025-10-13 05:07:18,738 | INFO     | did not find any defunct processes belonging to 476
[2025-10-13 01:07:50] 2025-10-13 05:07:18,738 | INFO     | ready for new job
[2025-10-13 01:07:50] 2025-10-13 05:07:18,738 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 01:07:50] 2025-10-13 05:07:18,739 | INFO     | ***************************************
[2025-10-13 01:07:50] 2025-10-13 05:07:18,739 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 01:07:50] 2025-10-13 05:07:18,740 | INFO     | ***************************************
[2025-10-13 01:07:50] 2025-10-13 05:07:18,740 | INFO     | 
[2025-10-13 01:07:50] 2025-10-13 05:07:18,740 | INFO     | architecture information:
[2025-10-13 01:07:50] 2025-10-13 05:07:18,741 | INFO     | executing command: cat /etc/os-release
[2025-10-13 01:07:50] 2025-10-13 05:07:18,755 | INFO     | cat /etc/os-release:
[2025-10-13 01:07:50] NAME="CentOS Linux"
[2025-10-13 01:07:50] VERSION="7 (Core)"
[2025-10-13 01:07:50] ID="centos"
[2025-10-13 01:07:50] ID_LIKE="rhel fedora"
[2025-10-13 01:07:50] VERSION_ID="7"
[2025-10-13 01:07:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 01:07:50] ANSI_COLOR="0;31"
[2025-10-13 01:07:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 01:07:50] HOME_URL="https://www.centos.org/"
[2025-10-13 01:07:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 01:07:50] 
[2025-10-13 01:07:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 01:07:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 01:07:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 01:07:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 01:07:50] 
[2025-10-13 01:07:50] 2025-10-13 05:07:18,755 | INFO     | ***************************************
[2025-10-13 01:07:50] 2025-10-13 05:07:19,258 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 01:07:50] 2025-10-13 05:07:19,275 | INFO     | sufficient remaining disk space (29367468032 B)
[2025-10-13 01:07:50] 2025-10-13 05:07:19,275 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 01:07:50] 2025-10-13 05:07:19,275 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 01:07:50] 2025-10-13 05:07:19,276 | INFO     | update_server=False
[2025-10-13 01:07:50] 2025-10-13 05:07:19,276 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 01:07:50] 2025-10-13 05:07:19,276 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 01:07:50] 2025-10-13 05:07:19,276 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:07:50] 2025-10-13 05:07:19,277 | INFO     | aborting loop
[2025-10-13 01:07:50] 2025-10-13 05:07:19,959 | INFO     | all data control threads have been joined
[2025-10-13 01:07:50] 2025-10-13 05:07:20,133 | INFO     | all payload control threads have been joined
[2025-10-13 01:07:50] 2025-10-13 05:07:20,281 | INFO     | [job] retrieve thread has finished
[2025-10-13 01:07:50] 2025-10-13 05:07:20,282 | INFO     | [job] job monitor thread has finished
[2025-10-13 01:07:50] 2025-10-13 05:07:20,288 | INFO     | all job control threads have been joined
[2025-10-13 01:07:50] 2025-10-13 05:07:20,496 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 01:07:50] 2025-10-13 05:07:20,598 | INFO     | [payload] failed_post thread has finished
[2025-10-13 01:07:50] 2025-10-13 05:07:20,777 | INFO     | [data] copytool_in thread has finished
[2025-10-13 01:07:50] 2025-10-13 05:07:20,965 | INFO     | [data] control thread has finished
[2025-10-13 01:07:50] 2025-10-13 05:07:21,138 | INFO     | [payload] control thread has finished
[2025-10-13 01:07:50] 2025-10-13 05:07:21,163 | INFO     | [payload] validate_post thread has finished
[2025-10-13 01:07:50] 2025-10-13 05:07:21,282 | INFO     | [data] copytool_out thread has finished
[2025-10-13 01:07:50] 2025-10-13 05:07:21,289 | INFO     | [job] control thread has finished
[2025-10-13 01:07:50] 2025-10-13 05:07:21,558 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 01:07:50] 2025-10-13 05:07:21,750 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 01:07:50] 2025-10-13 05:07:21,759 | INFO     | [job] validate thread has finished
[2025-10-13 01:07:50] 2025-10-13 05:07:22,160 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 01:07:50] 2025-10-13 05:07:22,174 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 01:07:50] 2025-10-13 05:07:23,165 | INFO     | [job] queue monitor thread has finished
[2025-10-13 01:07:50] 2025-10-13 05:07:26,179 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 01:07:50] 2025-10-13 05:07:28,657 | INFO     | [monitor] cgroup control has ended
[2025-10-13 01:07:50] 2025-10-13 05:07:30,277 | INFO     | job.realtimelogging is not enabled
[2025-10-13 01:07:50] 2025-10-13 05:07:31,282 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 01:07:50] 2025-10-13 05:07:32,602 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139996477101888)>', '<ExcThread(monitor, started 139995532752640)>']
[2025-10-13 01:07:50] 2025-10-13 05:07:37,626 | INFO     | all workflow threads have been joined
[2025-10-13 01:07:50] 2025-10-13 05:07:37,626 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 01:07:50] 2025-10-13 05:07:37,627 | INFO     | traces error code: 0
[2025-10-13 01:07:50] 2025-10-13 05:07:37,628 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 01:07:50] 2025-10-13 05:07:49,886 | INFO     | PID=25675 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 01:07:50] 2025-10-13 05:07:49,886 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 01:07:50] 2025-10-13 05:07:49,887 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 01:07:50] 2025-10-13 05:07:49,887 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 01:07:50] 2025-10-13 05:07:49,887 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 01:07:50] 2025-10-13 05:07:49,887 | INFO     | [monitor] control thread has ended
[2025-10-13 01:07:50] 2025-10-13 05:07:49,981 [wrapper] ==== pilot stdout END ====
[2025-10-13 01:07:50] 2025-10-13 05:07:49,985 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 01:07:50] 2025-10-13 05:07:49,988 [wrapper] pilotpid: 25675
[2025-10-13 01:07:50] 2025-10-13 05:07:49,992 [wrapper] Pilot exit status: 0
[2025-10-13 01:07:50] 2025-10-13 05:07:50,008 [wrapper] pandaids: 6840750032
[2025-10-13 01:07:50] 2025-10-13 05:07:50,047 [wrapper] cleanup supervisor_pilot 13266 25676
[2025-10-13 01:07:50] 2025-10-13 05:07:50,051 [wrapper] Test setup, not cleaning
[2025-10-13 01:07:50] 2025-10-13 05:07:50,055 [wrapper] apfmon messages muted
[2025-10-13 01:07:50] 2025-10-13 05:07:50,059 [wrapper] ==== wrapper stdout END ====
[2025-10-13 01:07:50] 2025-10-13 05:07:50,063 [wrapper] ==== wrapper stderr END ====
[2025-10-13 01:07:50]  *** Error codes and diagnostics ***
[2025-10-13 01:07:50]     "exeErrorCode": 0,
[2025-10-13 01:07:50]     "exeErrorDiag": "",
[2025-10-13 01:07:50]     "pilotErrorCode": 0,
[2025-10-13 01:07:50]     "pilotErrorDiag": "",
[2025-10-13 01:07:50]  *** Listing of results directory ***
[2025-10-13 01:07:50] total 407656
[2025-10-13 01:07:50] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 16:55 pilot3.tar.gz
[2025-10-13 01:07:50] -rwx------ 1 boincer umatlas     36292 Oct 12 17:05 runpilot2-wrapper.sh
[2025-10-13 01:07:50] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 17:05 queuedata.json
[2025-10-13 01:07:50] -rw-r--r-- 1 boincer umatlas       100 Oct 12 23:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 01:07:50] -rwxr-xr-x 1 boincer umatlas      7986 Oct 12 23:58 run_atlas
[2025-10-13 01:07:50] -rw-r--r-- 1 boincer umatlas       105 Oct 12 23:58 job.xml
[2025-10-13 01:07:50] -rw-r--r-- 2 boincer umatlas 220306722 Oct 12 23:58 EVNT.46676267._004766.pool.root.1
[2025-10-13 01:07:50] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 23:58 input.tar.gz
[2025-10-13 01:07:50] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 23:58 start_atlas.sh
[2025-10-13 01:07:50] drwxrwx--x 2 boincer umatlas      4096 Oct 12 23:58 shared
[2025-10-13 01:07:50] -rw-r--r-- 1 boincer umatlas         0 Oct 12 23:58 boinc_lockfile
[2025-10-13 01:07:50] -rw-r--r-- 1 boincer umatlas      2550 Oct 12 23:58 pandaJob.out
[2025-10-13 01:07:50] -rw------- 1 boincer umatlas    974373 Oct 12 23:58 agis_schedconf.cvmfs.json
[2025-10-13 01:07:50] -rw------- 1 boincer umatlas   1560580 Oct 12 23:58 agis_ddmendpoints.agis.ALL.json
[2025-10-13 01:07:50] drwx------ 5 boincer umatlas      4096 Oct 12 23:58 pilot3
[2025-10-13 01:07:50] -rw-r--r-- 1 boincer umatlas      5953 Oct 13 01:03 init_data.xml
[2025-10-13 01:07:50] -rw------- 1 boincer umatlas 191267208 Oct 13 01:06 HITS.46676269._089411.pool.root.1
[2025-10-13 01:07:50] -rw-r--r-- 1 boincer umatlas       529 Oct 13 01:06 boinc_task_state.xml
[2025-10-13 01:07:50] -rw------- 1 boincer umatlas      1050 Oct 13 01:07 memory_monitor_summary.json
[2025-10-13 01:07:50] -rw------- 1 boincer umatlas    383010 Oct 13 01:07 log.46676269._089411.job.log.tgz.1
[2025-10-13 01:07:50] -rw------- 1 boincer umatlas      7849 Oct 13 01:07 heartbeat.json
[2025-10-13 01:07:50] -rw------- 1 boincer umatlas        95 Oct 13 01:07 pilot_heartbeat.json
[2025-10-13 01:07:50] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 01:07 boinc_mmap_file
[2025-10-13 01:07:50] -rw-r--r-- 1 boincer umatlas        27 Oct 13 01:07 wrapper_checkpoint.txt
[2025-10-13 01:07:50] -rw------- 1 boincer umatlas       745 Oct 13 01:07 pilotlog.txt
[2025-10-13 01:07:50] -rw------- 1 boincer umatlas    603133 Oct 13 01:07 log.46676269._089411.job.log.1
[2025-10-13 01:07:50] -rw------- 1 boincer umatlas       357 Oct 13 01:07 output.list
[2025-10-13 01:07:50] -rw-r--r-- 1 boincer umatlas       620 Oct 13 01:07 runtime_log
[2025-10-13 01:07:50] -rw------- 1 boincer umatlas   1003520 Oct 13 01:07 result.tar.gz
[2025-10-13 01:07:50] -rw------- 1 boincer umatlas       659 Oct 13 01:07 hfyNDmtQIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnYlNDmprk5Po.diag
[2025-10-13 01:07:50] -rw-r--r-- 1 boincer umatlas      8705 Oct 13 01:07 runtime_log.err
[2025-10-13 01:07:50] -rw-r--r-- 1 boincer umatlas     22082 Oct 13 01:07 stderr.txt
[2025-10-13 01:07:50] HITS file was successfully produced:
[2025-10-13 01:07:50] -rw------- 1 boincer umatlas 191267208 Oct 13 01:06 shared/HITS.pool.root.1
[2025-10-13 01:07:50]  *** Contents of shared directory: ***
[2025-10-13 01:07:50] total 403492
[2025-10-13 01:07:50] -rw-r--r-- 2 boincer umatlas 220306722 Oct 12 23:58 ATLAS.root_0
[2025-10-13 01:07:50] -rw-r--r-- 2 boincer umatlas    569676 Oct 12 23:58 input.tar.gz
[2025-10-13 01:07:50] -rw-r--r-- 2 boincer umatlas     15120 Oct 12 23:58 start_atlas.sh
[2025-10-13 01:07:50] -rw------- 1 boincer umatlas 191267208 Oct 13 01:06 HITS.pool.root.1
[2025-10-13 01:07:50] -rw------- 1 boincer umatlas   1003520 Oct 13 01:07 result.tar.gz
01:07:51 (21891): run_atlas exited; CPU time 44272.038254
01:07:51 (21891): called boinc_finish(0)

</stderr_txt>
]]>

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