Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:11 (562754): wrapper (7.7.26015): starting
00:04:11 (562754): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 00:04:11] Arguments: --nthreads 12
[2025-10-13 00:04:11] Threads: 12
[2025-10-13 00:04:11] Checking for CVMFS
[2025-10-13 00:04:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:04:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:04:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:04:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:04:13] 2.13.2.0 850183 130179 490696 151647 1 778 25304843 32935936 33144 16776704 0 262084988 99.612 260885691 21025 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:04:13] CVMFS is ok
[2025-10-13 00:04:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:04:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:04:13] Further information can be found at the LHC@home message board.
[2025-10-13 00:04:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:04:13] Checking for apptainer binary...
[2025-10-13 00:04:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:04:13] Running /usr/bin/apptainer --version
[2025-10-13 00:04:13] apptainer version 1.4.3-1.el9
[2025-10-13 00:04:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:04:14] c6-12-29-2.aglt2.org
[2025-10-13 00:04:14] apptainer works
[2025-10-13 00:04:14] Set ATHENA_PROC_NUMBER=12
[2025-10-13 00:04:14] Set ATHENA_CORE_NUMBER=12
[2025-10-13 00:04:14] Starting ATLAS job with PandaID=6840853952
[2025-10-13 00:04:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:07:14]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:07:14] 2025-10-13 09:06:14,497 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 05:07:14] 2025-10-13 09:06:14,497 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:07:14] 2025-10-13 09:06:14,501 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:07:14] 2025-10-13 09:06:14,544 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:07:14] 2025-10-13 09:06:14,544 | INFO     | sum of square deviations: 7799551392.812297
[2025-10-13 05:07:14] 2025-10-13 09:06:14,553 | INFO     | sum of deviations: 95282648237.38573
[2025-10-13 05:07:14] 2025-10-13 09:06:14,553 | INFO     | mean x: 1760337408.7508533
[2025-10-13 05:07:14] 2025-10-13 09:06:14,553 | INFO     | mean y: 2464590.4573378838
[2025-10-13 05:07:14] 2025-10-13 09:06:14,553 | INFO     | -- intersect: -21502568410.759945
[2025-10-13 05:07:14] 2025-10-13 09:06:14,553 | INFO     | intersect: -21502568410.759945
[2025-10-13 05:07:14] 2025-10-13 09:06:14,554 | INFO     | chi2: 3.7303010248421273
[2025-10-13 05:07:14] 2025-10-13 09:06:14,554 | INFO     | sum of square deviations: 7407019074.0
[2025-10-13 05:07:14] 2025-10-13 09:06:14,565 | INFO     | sum of deviations: 112646878356.99997
[2025-10-13 05:07:14] 2025-10-13 09:06:14,565 | INFO     | mean x: 1760337256.25
[2025-10-13 05:07:14] 2025-10-13 09:06:14,565 | INFO     | mean y: 2471236.7916666665
[2025-10-13 05:07:14] 2025-10-13 09:06:14,565 | INFO     | -- intersect: -26768959319.954975
[2025-10-13 05:07:14] 2025-10-13 09:06:14,565 | INFO     | intersect: -26768959319.954975
[2025-10-13 05:07:14] 2025-10-13 09:06:14,566 | INFO     | chi2: 3.041080405276738
[2025-10-13 05:07:14] 2025-10-13 09:06:14,566 | INFO     | current chi2=3.041080405276738 (change=18.476273495771252 %)
[2025-10-13 05:07:14] 2025-10-13 09:06:14,566 | INFO     | right removable region: 287
[2025-10-13 05:07:14] 2025-10-13 09:06:14,566 | INFO     | sum of square deviations: 7406955999.94444
[2025-10-13 05:07:14] 2025-10-13 09:06:14,580 | INFO     | sum of deviations: 19959317961.333366
[2025-10-13 05:07:14] 2025-10-13 09:06:14,580 | INFO     | mean x: 1760337561.2638888
[2025-10-13 05:07:14] 2025-10-13 09:06:14,580 | INFO     | mean y: 2493763.1666666665
[2025-10-13 05:07:14] 2025-10-13 09:06:14,580 | INFO     | -- intersect: -4741038816.857794
[2025-10-13 05:07:14] 2025-10-13 09:06:14,580 | INFO     | intersect: -4741038816.857794
[2025-10-13 05:07:14] 2025-10-13 09:06:14,581 | INFO     | chi2: 1.0858309590914672
[2025-10-13 05:07:14] 2025-10-13 09:06:14,581 | INFO     | current chi2=1.0858309590914672 (change=70.89159958243795 %)
[2025-10-13 05:07:14] 2025-10-13 09:06:14,581 | INFO     | sum of square deviations: 7027844169.660794
[2025-10-13 05:07:14] 2025-10-13 09:06:14,594 | INFO     | sum of deviations: -9015366712.254423
[2025-10-13 05:07:14] 2025-10-13 09:06:14,594 | INFO     | mean x: 1760337713.7597172
[2025-10-13 05:07:14] 2025-10-13 09:06:14,594 | INFO     | mean y: 2505392.8197879856
[2025-10-13 05:07:14] 2025-10-13 09:06:14,594 | INFO     | -- intersect: 2260678688.048301
[2025-10-13 05:07:14] 2025-10-13 09:06:14,594 | INFO     | intersect: 2260678688.048301
[2025-10-13 05:07:14] 2025-10-13 09:06:14,595 | INFO     | chi2: 0.7250037314524898
[2025-10-13 05:07:14] 2025-10-13 09:06:14,595 | INFO     | current chi2=0.7250037314524898 (change=33.23051572787053 %)
[2025-10-13 05:07:14] 2025-10-13 09:06:14,595 | INFO     | sum of square deviations: 6661826202.766185
[2025-10-13 05:07:14] 2025-10-13 09:06:14,625 | INFO     | sum of deviations: -11600787419.017982
[2025-10-13 05:07:14] 2025-10-13 09:06:14,626 | INFO     | mean x: 1760337866.2697842
[2025-10-13 05:07:14] 2025-10-13 09:06:14,626 | INFO     | mean y: 2506465.866906475
[2025-10-13 05:07:14] 2025-10-13 09:06:14,626 | INFO     | -- intersect: 3067927981.0310144
[2025-10-13 05:07:14] 2025-10-13 09:06:14,626 | INFO     | intersect: 3067927981.0310144
[2025-10-13 05:07:14] 2025-10-13 09:06:14,626 | INFO     | chi2: 0.7207913927215875
[2025-10-13 05:07:14] 2025-10-13 09:06:14,627 | INFO     | current chi2=0.7207913927215875 (change=0.5810092483887096 %)
[2025-10-13 05:07:14] 2025-10-13 09:06:14,627 | INFO     | left removable region: 30
[2025-10-13 05:07:14] 2025-10-13 09:06:14,627 | INFO     | sum of square deviations: 5263265051.45526
[2025-10-13 05:07:14] 2025-10-13 09:06:14,629 | INFO     | sum of deviations: 4259985379.809338
[2025-10-13 05:07:14] 2025-10-13 09:06:14,629 | INFO     | mean x: 1760338140.770428
[2025-10-13 05:07:14] 2025-10-13 09:06:14,629 | INFO     | mean y: 2515212.3696498056
[2025-10-13 05:07:14] 2025-10-13 09:06:14,640 | INFO     | -- intersect: -1422268580.5592933
[2025-10-13 05:07:14] 2025-10-13 09:06:14,641 | INFO     | intersect: -1422268580.5592933
[2025-10-13 05:07:14] 2025-10-13 09:06:14,641 | INFO     | chi2: 0.01000518128576739
[2025-10-13 05:07:14] 2025-10-13 09:06:14,641 | INFO     | -- intersect: -1422268580.5592933
[2025-10-13 05:07:14] 2025-10-13 09:06:14,641 | INFO     | current memory leak: 0.81 B/s (using 257 data points, chi2=0.01)
[2025-10-13 05:07:14] 2025-10-13 09:06:14,642 | INFO     | could have reported an average CPU frequency of 2556 MHz (13 samples)
[2025-10-13 05:07:14] 2025-10-13 09:06:14,642 | INFO     | ..............................
[2025-10-13 05:07:14] 2025-10-13 09:06:14,642 | INFO     | . Timing measurements:
[2025-10-13 05:07:14] 2025-10-13 09:06:14,642 | INFO     | . get job = 0 s
[2025-10-13 05:07:14] 2025-10-13 09:06:14,643 | INFO     | . initial setup = 5 s
[2025-10-13 05:07:14] 2025-10-13 09:06:14,643 | INFO     | . payload setup = 46 s
[2025-10-13 05:07:14] 2025-10-13 09:06:14,643 | INFO     | . stage-in = 0 s
[2025-10-13 05:07:14] 2025-10-13 09:06:14,643 | INFO     | . payload execution = 17868 s
[2025-10-13 05:07:14] 2025-10-13 09:06:14,643 | INFO     | . stage-out = 4 s
[2025-10-13 05:07:14] 2025-10-13 09:06:14,643 | INFO     | . log creation = 0 s
[2025-10-13 05:07:14] 2025-10-13 09:06:14,643 | INFO     | ..............................
[2025-10-13 05:07:14] 2025-10-13 09:06:15,016 | INFO     | 
[2025-10-13 05:07:14] 2025-10-13 09:06:15,016 | INFO     | job summary report
[2025-10-13 05:07:14] 2025-10-13 09:06:15,016 | INFO     | --------------------------------------------------
[2025-10-13 05:07:14] 2025-10-13 09:06:15,016 | INFO     | PanDA job id: 6840853952
[2025-10-13 05:07:14] 2025-10-13 09:06:15,020 | INFO     | task id: 46676269
[2025-10-13 05:07:14] 2025-10-13 09:06:15,021 | INFO     | errors: (none)
[2025-10-13 05:07:14] 2025-10-13 09:06:15,021 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:07:14] 2025-10-13 09:06:15,021 | INFO     | pilot state: finished 
[2025-10-13 05:07:14] 2025-10-13 09:06:15,021 | INFO     | transexitcode: 0
[2025-10-13 05:07:14] 2025-10-13 09:06:15,021 | INFO     | exeerrorcode: 0
[2025-10-13 05:07:14] 2025-10-13 09:06:15,021 | INFO     | exeerrordiag: 
[2025-10-13 05:07:14] 2025-10-13 09:06:15,021 | INFO     | exitcode: 0
[2025-10-13 05:07:14] 2025-10-13 09:06:15,021 | INFO     | exitmsg: OK
[2025-10-13 05:07:14] 2025-10-13 09:06:15,021 | INFO     | cpuconsumptiontime: 47294 s
[2025-10-13 05:07:14] 2025-10-13 09:06:15,021 | INFO     | nevents: 400
[2025-10-13 05:07:14] 2025-10-13 09:06:15,021 | INFO     | neventsw: 0
[2025-10-13 05:07:14] 2025-10-13 09:06:15,021 | INFO     | pid: 595565
[2025-10-13 05:07:14] 2025-10-13 09:06:15,021 | INFO     | pgrp: 595565
[2025-10-13 05:07:14] 2025-10-13 09:06:15,021 | INFO     | corecount: 12
[2025-10-13 05:07:14] 2025-10-13 09:06:15,022 | INFO     | event service: False
[2025-10-13 05:07:14] 2025-10-13 09:06:15,022 | INFO     | sizes: {0: 2348635, 1: 2348834, 2: 2348834, 13: 2348862, 24: 2348918, 35: 2348946, 40: 2349364, 46: 2349392, 17919: 2381415, 17925: 2390469, 17956: 2390607}
[2025-10-13 05:07:14] 2025-10-13 09:06:15,022 | INFO     | --------------------------------------------------
[2025-10-13 05:07:14] 2025-10-13 09:06:15,022 | INFO     | 
[2025-10-13 05:07:14] 2025-10-13 09:06:15,022 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-13 05:07:14] 2025-10-13 09:06:15,100 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:07:14] 2025-10-13 09:06:15,100 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:07:14] 2025-10-13 09:06:15,100 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:07:14] 2025-10-13 09:06:15,100 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:07:14] 2025-10-13 09:06:15,100 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:07:14] 2025-10-13 09:06:15,100 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:07:14] 2025-10-13 09:06:15,101 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:07:14] 2025-10-13 09:06:15,101 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:07:14] 2025-10-13 09:06:15,101 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:07:14] 2025-10-13 09:06:15,101 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:07:14] 2025-10-13 09:06:15,101 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:07:14] 2025-10-13 09:06:15,101 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:07:14] 2025-10-13 09:06:15,101 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:07:14] 2025-10-13 09:06:15,101 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:07:14] 2025-10-13 09:06:15,101 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:07:14] 2025-10-13 09:06:15,101 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:07:14] 2025-10-13 09:06:15,101 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:07:14] 2025-10-13 09:06:15,101 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:07:14] 2025-10-13 09:06:15,101 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:07:14] 2025-10-13 09:06:15,101 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:07:14] 2025-10-13 09:06:15,102 | INFO     | job 6840853952 has completed (purged errors)
[2025-10-13 05:07:14] 2025-10-13 09:06:15,102 | INFO     | overall cleanup function is called
[2025-10-13 05:07:14] 2025-10-13 09:06:16,119 | INFO     | --- collectZombieJob: --- 10, [595565]
[2025-10-13 05:07:14] 2025-10-13 09:06:16,120 | INFO     | zombie collector waiting for pid 595565
[2025-10-13 05:07:14] 2025-10-13 09:06:16,120 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:07:14] 2025-10-13 09:06:16,120 | INFO     | collected zombie processes
[2025-10-13 05:07:14] 2025-10-13 09:06:16,120 | INFO     | will attempt to kill all subprocesses of pid=595565
[2025-10-13 05:07:14] 2025-10-13 09:06:16,802 | INFO     | process IDs to be killed: [595565] (in reverse order)
[2025-10-13 05:07:14] 2025-10-13 09:06:17,294 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:07:14] 2025-10-13 09:06:17,294 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:07:14] 2025-10-13 09:06:17,368 | INFO     | did not find any defunct processes belonging to 595565
[2025-10-13 05:07:14] 2025-10-13 09:06:17,386 | INFO     | did not find any defunct processes belonging to 595565
[2025-10-13 05:07:14] 2025-10-13 09:06:17,386 | INFO     | ready for new job
[2025-10-13 05:07:14] 2025-10-13 09:06:17,386 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:07:14] 2025-10-13 09:06:17,389 | INFO     | ***************************************
[2025-10-13 05:07:14] 2025-10-13 09:06:17,389 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:07:14] 2025-10-13 09:06:17,389 | INFO     | ***************************************
[2025-10-13 05:07:14] 2025-10-13 09:06:17,389 | INFO     | 
[2025-10-13 05:07:14] 2025-10-13 09:06:17,410 | INFO     | architecture information:
[2025-10-13 05:07:14] 2025-10-13 09:06:17,410 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:07:14] 2025-10-13 09:06:17,456 | INFO     | cat /etc/os-release:
[2025-10-13 05:07:14] NAME="CentOS Linux"
[2025-10-13 05:07:14] VERSION="7 (Core)"
[2025-10-13 05:07:14] ID="centos"
[2025-10-13 05:07:14] ID_LIKE="rhel fedora"
[2025-10-13 05:07:14] VERSION_ID="7"
[2025-10-13 05:07:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:07:14] ANSI_COLOR="0;31"
[2025-10-13 05:07:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:07:14] HOME_URL="https://www.centos.org/"
[2025-10-13 05:07:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:07:14] 
[2025-10-13 05:07:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:07:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:07:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:07:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:07:14] 
[2025-10-13 05:07:14] 2025-10-13 09:06:17,456 | INFO     | ***************************************
[2025-10-13 05:07:14] 2025-10-13 09:06:17,960 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-13 05:07:14] 2025-10-13 09:06:18,022 | INFO     | sufficient remaining disk space (93722771456 B)
[2025-10-13 05:07:14] 2025-10-13 09:06:18,022 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:07:14] 2025-10-13 09:06:18,022 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:07:14] 2025-10-13 09:06:18,023 | INFO     | update_server=False
[2025-10-13 05:07:14] 2025-10-13 09:06:18,023 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:07:14] 2025-10-13 09:06:18,023 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:07:14] 2025-10-13 09:06:18,023 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:07:14] 2025-10-13 09:06:18,027 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:07:14] 2025-10-13 09:06:18,028 | INFO     | aborting loop
[2025-10-13 05:07:14] 2025-10-13 09:06:18,172 | INFO     | all job control threads have been joined
[2025-10-13 05:07:14] 2025-10-13 09:06:18,906 | INFO     | all data control threads have been joined
[2025-10-13 05:07:14] 2025-10-13 09:06:19,030 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:07:14] 2025-10-13 09:06:19,033 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:07:14] 2025-10-13 09:06:19,158 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:07:14] 2025-10-13 09:06:19,159 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:07:14] 2025-10-13 09:06:19,178 | INFO     | [job] control thread has finished
[2025-10-13 05:07:14] 2025-10-13 09:06:19,432 | INFO     | [job] validate thread has finished
[2025-10-13 05:07:14] 2025-10-13 09:06:19,519 | INFO     | all payload control threads have been joined
[2025-10-13 05:07:14] 2025-10-13 09:06:19,577 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:07:14] 2025-10-13 09:06:19,811 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:07:14] 2025-10-13 09:06:19,930 | INFO     | [data] control thread has finished
[2025-10-13 05:07:14] 2025-10-13 09:06:20,008 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:07:14] 2025-10-13 09:06:20,035 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:07:14] 2025-10-13 09:06:20,036 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:07:14] 2025-10-13 09:06:20,078 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:07:14] 2025-10-13 09:06:20,141 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:07:14] 2025-10-13 09:06:20,525 | INFO     | [payload] control thread has finished
[2025-10-13 05:07:14] 2025-10-13 09:06:21,041 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:07:14] 2025-10-13 09:06:22,037 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:07:14] 2025-10-13 09:06:48,252 | INFO     | PID=574141 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 05:07:14] 2025-10-13 09:06:48,252 | INFO     | .. there are 35 such processes running
[2025-10-13 05:07:14] 2025-10-13 09:06:48,252 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:07:14] 2025-10-13 09:06:48,252 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:07:14] 2025-10-13 09:06:48,252 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:07:14] 2025-10-13 09:07:07,612 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:07:14] 2025-10-13 09:07:08,445 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140118472066880)>', '<ExcThread(monitor, started 140117972858624)>']
[2025-10-13 05:07:14] 2025-10-13 09:07:09,389 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:07:14] 2025-10-13 09:07:09,390 | INFO     | [monitor] control thread has ended
[2025-10-13 05:07:14] 2025-10-13 09:07:13,471 | INFO     | all workflow threads have been joined
[2025-10-13 05:07:14] 2025-10-13 09:07:13,471 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:07:14] 2025-10-13 09:07:13,472 | INFO     | traces error code: 0
[2025-10-13 05:07:14] 2025-10-13 09:07:13,472 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:07:14] 2025-10-13 09:07:13,725 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:07:14] 2025-10-13 09:07:13,739 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:07:14] 2025-10-13 09:07:13,748 [wrapper] pilotpid: 574141
[2025-10-13 05:07:14] 2025-10-13 09:07:13,765 [wrapper] Pilot exit status: 0
[2025-10-13 05:07:14] 2025-10-13 09:07:13,812 [wrapper] pandaids: 6840853952
[2025-10-13 05:07:14] 2025-10-13 09:07:13,898 [wrapper] cleanup supervisor_pilot 1555784 574142
[2025-10-13 05:07:14] 2025-10-13 09:07:13,902 [wrapper] Test setup, not cleaning
[2025-10-13 05:07:14] 2025-10-13 09:07:13,917 [wrapper] apfmon messages muted
[2025-10-13 05:07:14] 2025-10-13 09:07:13,928 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:07:14] 2025-10-13 09:07:13,933 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:07:14]  *** Error codes and diagnostics ***
[2025-10-13 05:07:14]     "exeErrorCode": 0,
[2025-10-13 05:07:14]     "exeErrorDiag": "",
[2025-10-13 05:07:14]     "pilotErrorCode": 0,
[2025-10-13 05:07:14]     "pilotErrorDiag": "",
[2025-10-13 05:07:14]  *** Listing of results directory ***
[2025-10-13 05:07:14] total 411516
[2025-10-13 05:07:14] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 18:49 queuedata.json
[2025-10-13 05:07:14] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 18:49 pilot3.tar.gz
[2025-10-13 05:07:14] -rwx------. 1 boincer umatlas     36292 Oct 12 18:50 runpilot2-wrapper.sh
[2025-10-13 05:07:14] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:07:14] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:04 run_atlas
[2025-10-13 05:07:14] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:04 job.xml
[2025-10-13 05:07:14] -rw-r--r--. 2 boincer umatlas 218839718 Oct 13 00:04 EVNT.46676267._004633.pool.root.1
[2025-10-13 05:07:14] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:04 shared
[2025-10-13 05:07:14] -rw-r--r--. 2 boincer umatlas    569683 Oct 13 00:04 input.tar.gz
[2025-10-13 05:07:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:04 start_atlas.sh
[2025-10-13 05:07:14] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:04 boinc_lockfile
[2025-10-13 05:07:14] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 00:04 pandaJob.out
[2025-10-13 05:07:14] -rw-------. 1 boincer umatlas    974373 Oct 13 00:05 agis_schedconf.cvmfs.json
[2025-10-13 05:07:14] drwx------. 5 boincer umatlas      4096 Oct 13 00:05 pilot3
[2025-10-13 05:07:14] -rw-r--r--. 1 boincer umatlas      6860 Oct 13 05:01 init_data.xml
[2025-10-13 05:07:14] -rw-------. 1 boincer umatlas 193327348 Oct 13 05:04 HITS.46676269._091552.pool.root.1
[2025-10-13 05:07:14] -rw-r--r--. 1 boincer umatlas       531 Oct 13 05:04 boinc_task_state.xml
[2025-10-13 05:07:14] -rw-------. 1 boincer umatlas      1044 Oct 13 05:05 memory_monitor_summary.json
[2025-10-13 05:07:14] -rw-------. 1 boincer umatlas   1560580 Oct 13 05:05 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:07:14] -rw-------. 1 boincer umatlas    564301 Oct 13 05:05 log.46676269._091552.job.log.tgz.1
[2025-10-13 05:07:14] -rw-------. 1 boincer umatlas      7832 Oct 13 05:06 heartbeat.json
[2025-10-13 05:07:14] -rw-------. 1 boincer umatlas        95 Oct 13 05:06 pilot_heartbeat.json
[2025-10-13 05:07:14] -rw-r--r--. 1 boincer umatlas        28 Oct 13 05:07 wrapper_checkpoint.txt
[2025-10-13 05:07:14] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 05:07 boinc_mmap_file
[2025-10-13 05:07:14] -rw-------. 1 boincer umatlas      4823 Oct 13 05:07 pilotlog.txt
[2025-10-13 05:07:14] -rw-------. 1 boincer umatlas   2096135 Oct 13 05:07 log.46676269._091552.job.log.1
[2025-10-13 05:07:14] -rw-------. 1 boincer umatlas       357 Oct 13 05:07 output.list
[2025-10-13 05:07:14] -rw-r--r--. 1 boincer umatlas       620 Oct 13 05:07 runtime_log
[2025-10-13 05:07:14] -rw-------. 1 boincer umatlas   2682880 Oct 13 05:07 result.tar.gz
[2025-10-13 05:07:14] -rw-------. 1 boincer umatlas       658 Oct 13 05:07 U6IKDmU4JS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmAwlNDmlWqOFn.diag
[2025-10-13 05:07:14] -rw-r--r--. 1 boincer umatlas      8716 Oct 13 05:07 runtime_log.err
[2025-10-13 05:07:14] -rw-r--r--. 1 boincer umatlas     21014 Oct 13 05:07 stderr.txt
[2025-10-13 05:07:14] HITS file was successfully produced:
[2025-10-13 05:07:14] -rw-------. 1 boincer umatlas 193327348 Oct 13 05:04 shared/HITS.pool.root.1
[2025-10-13 05:07:14]  *** Contents of shared directory: ***
[2025-10-13 05:07:14] total 405716
[2025-10-13 05:07:14] -rw-r--r--. 2 boincer umatlas 218839718 Oct 13 00:04 ATLAS.root_0
[2025-10-13 05:07:14] -rw-r--r--. 2 boincer umatlas    569683 Oct 13 00:04 input.tar.gz
[2025-10-13 05:07:14] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:04 start_atlas.sh
[2025-10-13 05:07:14] -rw-------. 1 boincer umatlas 193327348 Oct 13 05:04 HITS.pool.root.1
[2025-10-13 05:07:14] -rw-------. 1 boincer umatlas   2682880 Oct 13 05:07 result.tar.gz
05:07:15 (562754): run_atlas exited; CPU time 48044.798423
05:07:15 (562754): called boinc_finish(0)

</stderr_txt>
]]>

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