Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:21 (2358227): wrapper (7.7.26015): starting
00:01:21 (2358227): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 00:01:21] Arguments: --nthreads 9
[2025-10-13 00:01:21] Threads: 9
[2025-10-13 00:01:21] Checking for CVMFS
[2025-10-13 00:01:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 00:01:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 00:01:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 00:01:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 00:01:24] 2.13.2.0 587300 139021 245452 151647 3 550 27998400 32935936 22547 16776704 0 108104867 99.705 86880305 29743 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 00:01:24] CVMFS is ok
[2025-10-13 00:01:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 00:01:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 00:01:24] Further information can be found at the LHC@home message board.
[2025-10-13 00:01:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 00:01:24] Checking for apptainer binary...
[2025-10-13 00:01:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 00:01:24] Running /usr/bin/apptainer --version
[2025-10-13 00:01:25] apptainer version 1.4.3-1.el9
[2025-10-13 00:01:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 00:01:27] c-8-32.aglt2.org
[2025-10-13 00:01:27] apptainer works
[2025-10-13 00:01:27] Set ATHENA_PROC_NUMBER=9
[2025-10-13 00:01:27] Set ATHENA_CORE_NUMBER=9
[2025-10-13 00:01:27] Starting ATLAS job with PandaID=6840852412
[2025-10-13 00:01:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:38:22]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:38:22] 2025-10-13 12:44:46,745 | INFO     | -- intersect: -7110590131.720202
[2025-10-13 09:38:22] 2025-10-13 12:44:46,745 | INFO     | intersect: -7110590131.720202
[2025-10-13 09:38:22] 2025-10-13 12:44:46,746 | INFO     | chi2: 1.826022170991856
[2025-10-13 09:38:22] 2025-10-13 12:44:46,746 | INFO     | current chi2=1.826022170991856 (change=62.52258195013363 %)
[2025-10-13 09:38:22] 2025-10-13 12:44:46,747 | INFO     | sum of square deviations: 38762278504.42195
[2025-10-13 09:38:22] 2025-10-13 12:44:46,754 | INFO     | sum of deviations: 92914566283.40016
[2025-10-13 09:38:22] 2025-10-13 12:44:46,755 | INFO     | mean x: 1760344178.466
[2025-10-13 09:38:22] 2025-10-13 12:44:46,755 | INFO     | mean y: 2164901.2
[2025-10-13 09:38:22] 2025-10-13 12:44:46,755 | INFO     | -- intersect: -4217442979.513665
[2025-10-13 09:38:22] 2025-10-13 12:44:46,755 | INFO     | intersect: -4217442979.513665
[2025-10-13 09:38:22] 2025-10-13 12:44:46,756 | INFO     | chi2: 0.9803481524630864
[2025-10-13 09:38:22] 2025-10-13 12:44:46,756 | INFO     | current chi2=0.9803481524630864 (change=46.312363122591094 %)
[2025-10-13 09:38:22] 2025-10-13 12:44:46,757 | INFO     | sum of square deviations: 37610909227.708984
[2025-10-13 09:38:22] 2025-10-13 12:44:46,763 | INFO     | sum of deviations: 39805774492.2303
[2025-10-13 09:38:22] 2025-10-13 12:44:46,763 | INFO     | mean x: 1760344330.9757576
[2025-10-13 09:38:22] 2025-10-13 12:44:46,763 | INFO     | mean y: 2171928.5191919194
[2025-10-13 09:38:22] 2025-10-13 12:44:46,764 | INFO     | -- intersect: -1860901070.9464302
[2025-10-13 09:38:22] 2025-10-13 12:44:46,764 | INFO     | intersect: -1860901070.9464302
[2025-10-13 09:38:22] 2025-10-13 12:44:46,764 | INFO     | chi2: 0.4351173444253445
[2025-10-13 09:38:22] 2025-10-13 12:44:46,765 | INFO     | current chi2=0.4351173444253445 (change=55.61603871725273 %)
[2025-10-13 09:38:22] 2025-10-13 12:44:46,765 | INFO     | sum of square deviations: 36482744190.155045
[2025-10-13 09:38:22] 2025-10-13 12:44:46,772 | INFO     | sum of deviations: 9365723155.408194
[2025-10-13 09:38:22] 2025-10-13 12:44:46,773 | INFO     | mean x: 1760344483.4734695
[2025-10-13 09:38:22] 2025-10-13 12:44:46,773 | INFO     | mean y: 2176044.3775510206
[2025-10-13 09:38:22] 2025-10-13 12:44:46,773 | INFO     | -- intersect: -449733466.71705514
[2025-10-13 09:38:22] 2025-10-13 12:44:46,773 | INFO     | intersect: -449733466.71705514
[2025-10-13 09:38:22] 2025-10-13 12:44:46,774 | INFO     | chi2: 0.2617127304838453
[2025-10-13 09:38:22] 2025-10-13 12:44:46,774 | INFO     | current chi2=0.2617127304838453 (change=39.85237917153431 %)
[2025-10-13 09:38:22] 2025-10-13 12:44:46,775 | INFO     | sum of square deviations: 35377072233.967285
[2025-10-13 09:38:22] 2025-10-13 12:44:46,782 | INFO     | sum of deviations: -11191326961.738146
[2025-10-13 09:38:22] 2025-10-13 12:44:46,782 | INFO     | mean x: 1760344635.9917526
[2025-10-13 09:38:22] 2025-10-13 12:44:46,782 | INFO     | mean y: 2178874.3154639173
[2025-10-13 09:38:22] 2025-10-13 12:44:46,782 | INFO     | -- intersect: 559053458.4086637
[2025-10-13 09:38:22] 2025-10-13 12:44:46,783 | INFO     | intersect: 559053458.4086637
[2025-10-13 09:38:22] 2025-10-13 12:44:46,783 | INFO     | chi2: 0.1686052576506449
[2025-10-13 09:38:22] 2025-10-13 12:44:46,784 | INFO     | current chi2=0.1686052576506449 (change=35.57621085572206 %)
[2025-10-13 09:38:22] 2025-10-13 12:44:46,785 | INFO     | sum of square deviations: 34294400889.791595
[2025-10-13 09:38:22] 2025-10-13 12:44:46,793 | INFO     | sum of deviations: -11370493581.687504
[2025-10-13 09:38:22] 2025-10-13 12:44:46,793 | INFO     | mean x: 1760344788.4791667
[2025-10-13 09:38:22] 2025-10-13 12:44:46,793 | INFO     | mean y: 2178897.68125
[2025-10-13 09:38:22] 2025-10-13 12:44:46,793 | INFO     | -- intersect: 585830706.7121978
[2025-10-13 09:38:22] 2025-10-13 12:44:46,793 | INFO     | intersect: 585830706.7121978
[2025-10-13 09:38:22] 2025-10-13 12:44:46,796 | INFO     | chi2: 0.16694774057312992
[2025-10-13 09:38:22] 2025-10-13 12:44:46,796 | INFO     | current chi2=0.16694774057312992 (change=0.9830755580288107 %)
[2025-10-13 09:38:22] 2025-10-13 12:44:46,796 | INFO     | left removable region: 60
[2025-10-13 09:38:22] 2025-10-13 12:44:46,797 | INFO     | sum of square deviations: 27142579406.997818
[2025-10-13 09:38:22] 2025-10-13 12:44:46,803 | INFO     | sum of deviations: -12042404071.21171
[2025-10-13 09:38:22] 2025-10-13 12:44:46,803 | INFO     | mean x: 1760345520.5022523
[2025-10-13 09:38:22] 2025-10-13 12:44:46,805 | INFO     | mean y: 2180606.2117117117
[2025-10-13 09:38:22] 2025-10-13 12:44:46,805 | INFO     | -- intersect: 783196726.4913566
[2025-10-13 09:38:22] 2025-10-13 12:44:46,805 | INFO     | intersect: 783196726.4913566
[2025-10-13 09:38:22] 2025-10-13 12:44:46,806 | INFO     | chi2: 0.13372261325923238
[2025-10-13 09:38:22] 2025-10-13 12:44:46,807 | INFO     | -- intersect: 783196726.4913566
[2025-10-13 09:38:22] 2025-10-13 12:44:46,807 | INFO     | current memory leak: -0.44 B/s (using 444 data points, chi2=0.13)
[2025-10-13 09:38:22] 2025-10-13 12:44:46,808 | INFO     | could have reported an average CPU frequency of 2597 MHz (11 samples)
[2025-10-13 09:38:22] 2025-10-13 12:44:46,808 | INFO     | ..............................
[2025-10-13 09:38:22] 2025-10-13 12:44:46,809 | INFO     | . Timing measurements:
[2025-10-13 09:38:22] 2025-10-13 12:44:46,809 | INFO     | . get job = 0 s
[2025-10-13 09:38:22] 2025-10-13 12:44:46,809 | INFO     | . initial setup = 9 s
[2025-10-13 09:38:22] 2025-10-13 12:44:46,809 | INFO     | . payload setup = 53 s
[2025-10-13 09:38:22] 2025-10-13 12:44:46,809 | INFO     | . stage-in = 2 s
[2025-10-13 09:38:22] 2025-10-13 12:44:46,809 | INFO     | . payload execution = 31137 s
[2025-10-13 09:38:22] 2025-10-13 12:44:46,810 | INFO     | . stage-out = 4 s
[2025-10-13 09:38:22] 2025-10-13 12:44:46,810 | INFO     | . log creation = 0 s
[2025-10-13 09:38:22] 2025-10-13 12:44:46,810 | INFO     | ..............................
[2025-10-13 09:38:22] 2025-10-13 12:44:47,116 | INFO     | 
[2025-10-13 09:38:22] 2025-10-13 12:44:47,117 | INFO     | job summary report
[2025-10-13 09:38:22] 2025-10-13 12:44:47,117 | INFO     | --------------------------------------------------
[2025-10-13 09:38:22] 2025-10-13 12:44:47,117 | INFO     | PanDA job id: 6840852412
[2025-10-13 09:38:22] 2025-10-13 12:44:47,119 | INFO     | task id: 46676269
[2025-10-13 09:38:22] 2025-10-13 12:44:47,122 | INFO     | errors: (none)
[2025-10-13 09:38:22] 2025-10-13 12:44:47,122 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:38:22] 2025-10-13 12:44:47,123 | INFO     | pilot state: finished 
[2025-10-13 09:38:22] 2025-10-13 12:44:47,123 | INFO     | transexitcode: 0
[2025-10-13 09:38:22] 2025-10-13 12:44:47,123 | INFO     | exeerrorcode: 0
[2025-10-13 09:38:22] 2025-10-13 12:44:47,134 | INFO     | exeerrordiag: 
[2025-10-13 09:38:22] 2025-10-13 12:44:47,134 | INFO     | exitcode: 0
[2025-10-13 09:38:22] 2025-10-13 12:44:47,134 | INFO     | exitmsg: OK
[2025-10-13 09:38:22] 2025-10-13 12:44:47,134 | INFO     | cpuconsumptiontime: 52337 s
[2025-10-13 09:38:22] 2025-10-13 12:44:47,134 | INFO     | nevents: 400
[2025-10-13 09:38:22] 2025-10-13 12:44:47,135 | INFO     | neventsw: 0
[2025-10-13 09:38:22] 2025-10-13 12:44:47,135 | INFO     | pid: 2384014
[2025-10-13 09:38:22] 2025-10-13 12:44:47,135 | INFO     | pgrp: 2384014
[2025-10-13 09:38:22] 2025-10-13 12:44:47,135 | INFO     | corecount: 9
[2025-10-13 09:38:22] 2025-10-13 12:44:47,135 | INFO     | event service: False
[2025-10-13 09:38:22] 2025-10-13 12:44:47,135 | INFO     | sizes: {0: 2348028, 1: 2348629, 2: 2348713, 4: 2348940, 5: 2348940, 16: 2348996, 27: 2349152, 38: 2349180, 42: 2349470, 51: 2349526, 31196: 2379507, 31197: 2379786
[2025-10-13 09:38:22] 2025-10-13 12:44:47,135 | INFO     | --------------------------------------------------
[2025-10-13 09:38:22] 2025-10-13 12:44:47,135 | INFO     | 
[2025-10-13 09:38:22] 2025-10-13 12:44:47,136 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 09:38:22] 2025-10-13 12:44:47,314 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:38:22] 2025-10-13 12:44:47,314 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:38:22] 2025-10-13 12:44:47,314 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:38:22] 2025-10-13 12:44:47,315 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:38:22] 2025-10-13 12:44:47,315 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:38:22] 2025-10-13 12:44:47,315 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:38:22] 2025-10-13 12:44:47,315 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:38:22] 2025-10-13 12:44:47,315 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:38:22] 2025-10-13 12:44:47,315 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:38:22] 2025-10-13 12:44:47,315 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:38:22] 2025-10-13 12:44:47,315 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:38:22] 2025-10-13 12:44:47,316 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:38:22] 2025-10-13 12:44:47,316 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:38:22] 2025-10-13 12:44:47,316 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:38:22] 2025-10-13 12:44:47,316 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:38:22] 2025-10-13 12:44:47,316 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:38:22] 2025-10-13 12:44:47,316 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:38:22] 2025-10-13 12:44:47,316 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:38:22] 2025-10-13 12:44:47,316 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:38:22] 2025-10-13 12:44:47,316 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:38:22] 2025-10-13 12:44:47,317 | INFO     | job 6840852412 has completed (purged errors)
[2025-10-13 09:38:22] 2025-10-13 12:44:47,317 | INFO     | overall cleanup function is called
[2025-10-13 09:38:22] 2025-10-13 12:44:48,326 | INFO     | --- collectZombieJob: --- 10, [2384014]
[2025-10-13 09:38:22] 2025-10-13 12:44:48,326 | INFO     | zombie collector waiting for pid 2384014
[2025-10-13 09:38:22] 2025-10-13 12:44:48,327 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:38:22] 2025-10-13 12:44:48,327 | INFO     | collected zombie processes
[2025-10-13 09:38:22] 2025-10-13 12:44:48,327 | INFO     | will attempt to kill all subprocesses of pid=2384014
[2025-10-13 09:38:22] 2025-10-13 12:44:48,996 | INFO     | process IDs to be killed: [2384014] (in reverse order)
[2025-10-13 09:38:22] 2025-10-13 12:44:49,143 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:38:22] 2025-10-13 12:44:49,144 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:38:22] 2025-10-13 12:44:49,157 | INFO     | did not find any defunct processes belonging to 2384014
[2025-10-13 09:38:22] 2025-10-13 12:44:49,213 | INFO     | did not find any defunct processes belonging to 2384014
[2025-10-13 09:38:22] 2025-10-13 12:44:49,214 | INFO     | ready for new job
[2025-10-13 09:38:22] 2025-10-13 12:44:49,214 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:38:22] 2025-10-13 12:44:49,240 | INFO     | ***************************************
[2025-10-13 09:38:22] 2025-10-13 12:44:49,241 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:38:22] 2025-10-13 12:44:49,241 | INFO     | ***************************************
[2025-10-13 09:38:22] 2025-10-13 12:44:49,241 | INFO     | 
[2025-10-13 09:38:22] 2025-10-13 12:44:49,271 | INFO     | architecture information:
[2025-10-13 09:38:22] 2025-10-13 12:44:49,310 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:38:22] 2025-10-13 12:44:49,537 | INFO     | cat /etc/os-release:
[2025-10-13 09:38:22] NAME="CentOS Linux"
[2025-10-13 09:38:22] VERSION="7 (Core)"
[2025-10-13 09:38:22] ID="centos"
[2025-10-13 09:38:22] ID_LIKE="rhel fedora"
[2025-10-13 09:38:22] VERSION_ID="7"
[2025-10-13 09:38:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:38:22] ANSI_COLOR="0;31"
[2025-10-13 09:38:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:38:22] HOME_URL="https://www.centos.org/"
[2025-10-13 09:38:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:38:22] 
[2025-10-13 09:38:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:38:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:38:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:38:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:38:22] 
[2025-10-13 09:38:22] 2025-10-13 12:44:49,538 | INFO     | ***************************************
[2025-10-13 09:38:22] 2025-10-13 12:44:50,041 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 09:38:22] 2025-10-13 12:44:50,295 | INFO     | sufficient remaining disk space (75087478784 B)
[2025-10-13 09:38:22] 2025-10-13 12:44:50,295 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:38:22] 2025-10-13 12:44:50,296 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:38:22] 2025-10-13 12:44:50,296 | INFO     | update_server=False
[2025-10-13 09:38:22] 2025-10-13 12:44:50,296 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:38:22] 2025-10-13 12:44:50,317 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:38:22] 2025-10-13 12:44:50,318 | INFO     | aborting loop
[2025-10-13 09:38:22] 2025-10-13 12:44:51,032 | INFO     | all payload control threads have been joined
[2025-10-13 09:38:22] 2025-10-13 12:44:51,134 | INFO     | all data control threads have been joined
[2025-10-13 09:38:22] 2025-10-13 12:44:51,135 | INFO     | all job control threads have been joined
[2025-10-13 09:38:22] 2025-10-13 12:44:51,301 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:38:22] 2025-10-13 12:44:51,323 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:38:22] 2025-10-13 12:44:51,330 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:38:22] 2025-10-13 12:44:51,420 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:38:22] 2025-10-13 12:44:51,568 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:38:22] 2025-10-13 12:44:51,974 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:38:22] 2025-10-13 12:44:52,037 | INFO     | [payload] control thread has finished
[2025-10-13 09:38:22] 2025-10-13 12:44:52,098 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:38:22] 2025-10-13 12:44:52,140 | INFO     | [data] control thread has finished
[2025-10-13 09:38:22] 2025-10-13 12:44:52,151 | INFO     | [job] control thread has finished
[2025-10-13 09:38:22] 2025-10-13 12:44:52,233 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:38:22] 2025-10-13 12:44:52,580 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:38:22] 2025-10-13 12:44:52,768 | INFO     | [job] validate thread has finished
[2025-10-13 09:38:22] 2025-10-13 12:44:52,768 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:38:22] 2025-10-13 12:44:52,890 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:38:22] 2025-10-13 12:44:53,104 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:38:22] 2025-10-13 12:44:53,336 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:38:22] 2025-10-13 12:44:53,361 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:38:22] 2025-10-13 12:44:57,372 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:38:22] 2025-10-13 12:45:21,289 | INFO     | PID=2365885 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 09:38:22] 2025-10-13 12:45:21,289 | INFO     | .. there are 29 such processes running
[2025-10-13 09:38:22] 2025-10-13 12:45:21,289 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:38:22] 2025-10-13 12:45:21,289 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:38:22] 2025-10-13 12:45:21,289 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:38:22] 2025-10-13 12:45:45,833 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:38:22] 2025-10-13 12:45:46,839 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140516698724160)>', '<ExcThread(monitor, started 140515592877824)>']
[2025-10-13 09:38:22] 2025-10-13 12:45:47,447 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:38:22] 2025-10-13 12:45:47,447 | INFO     | [monitor] control thread has ended
[2025-10-13 09:38:22] 2025-10-13 12:45:51,865 | INFO     | all workflow threads have been joined
[2025-10-13 09:38:22] 2025-10-13 12:45:51,865 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:38:22] 2025-10-13 12:45:51,866 | INFO     | traces error code: 0
[2025-10-13 09:38:22] 2025-10-13 12:45:51,866 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:38:22] 2025-10-13 12:45:53,842 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:38:22] 2025-10-13 12:45:53,868 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:38:22] 2025-10-13 12:45:53,886 [wrapper] pilotpid: 2365885
[2025-10-13 09:38:22] 2025-10-13 12:45:53,906 [wrapper] Pilot exit status: 0
[2025-10-13 09:38:22] 2025-10-13 12:45:54,031 [wrapper] pandaids: 6840852412
[2025-10-13 09:38:22] 2025-10-13 12:45:54,292 [wrapper] cleanup supervisor_pilot 3879958 2365886
[2025-10-13 09:38:22] 2025-10-13 12:45:54,295 [wrapper] Test setup, not cleaning
[2025-10-13 09:38:22] 2025-10-13 12:45:54,298 [wrapper] apfmon messages muted
[2025-10-13 09:38:22] 2025-10-13 12:45:54,323 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:38:22] 2025-10-13 12:45:54,350 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:38:22]  *** Error codes and diagnostics ***
[2025-10-13 09:38:22]     "exeErrorCode": 0,
[2025-10-13 09:38:22]     "exeErrorDiag": "",
[2025-10-13 09:38:22]     "pilotErrorCode": 0,
[2025-10-13 09:38:22]     "pilotErrorDiag": "",
[2025-10-13 09:38:22]  *** Listing of results directory ***
[2025-10-13 09:38:22] total 417264
[2025-10-13 09:38:22] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 17:57 pilot3.tar.gz
[2025-10-13 09:38:22] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 18:39 queuedata.json
[2025-10-13 09:38:22] -rwx------. 1 boincer umatlas     36292 Oct 12 18:40 runpilot2-wrapper.sh
[2025-10-13 09:38:22] -rw-r--r--. 1 boincer umatlas       100 Oct 13 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:38:22] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 00:01 run_atlas
[2025-10-13 09:38:22] -rw-r--r--. 1 boincer umatlas       105 Oct 13 00:01 job.xml
[2025-10-13 09:38:22] -rw-r--r--. 2 boincer umatlas 220516996 Oct 13 00:01 EVNT.46676267._004621.pool.root.1
[2025-10-13 09:38:22] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:01 start_atlas.sh
[2025-10-13 09:38:22] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 00:01 shared
[2025-10-13 09:38:22] -rw-r--r--. 2 boincer umatlas    569682 Oct 13 00:01 input.tar.gz
[2025-10-13 09:38:22] -rw-r--r--. 1 boincer umatlas         0 Oct 13 00:01 boinc_lockfile
[2025-10-13 09:38:22] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 00:01 pandaJob.out
[2025-10-13 09:38:22] -rw-------. 1 boincer umatlas    974373 Oct 13 00:02 agis_schedconf.cvmfs.json
[2025-10-13 09:38:22] drwx------. 5 boincer umatlas      4096 Oct 13 00:02 pilot3
[2025-10-13 09:38:22] -rw-------. 1 boincer umatlas 196565099 Oct 13 08:43 HITS.46676269._091241.pool.root.1
[2025-10-13 09:38:22] -rw-r--r--. 1 boincer umatlas       530 Oct 13 08:43 boinc_task_state.xml
[2025-10-13 09:38:22] -rw-------. 1 boincer umatlas      1042 Oct 13 08:44 memory_monitor_summary.json
[2025-10-13 09:38:22] -rw-------. 1 boincer umatlas   1560580 Oct 13 08:44 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:38:22] -rw-------. 1 boincer umatlas    573822 Oct 13 08:44 log.46676269._091241.job.log.tgz.1
[2025-10-13 09:38:22] -rw-------. 1 boincer umatlas        95 Oct 13 08:44 pilot_heartbeat.json
[2025-10-13 09:38:22] -rw-------. 1 boincer umatlas      7825 Oct 13 08:44 heartbeat.json
[2025-10-13 09:38:22] -rw-------. 1 boincer umatlas      4824 Oct 13 08:45 pilotlog.txt
[2025-10-13 09:38:22] -rw-------. 1 boincer umatlas   2570499 Oct 13 08:45 log.46676269._091241.job.log.1
[2025-10-13 09:38:22] -rw-------. 1 boincer umatlas       357 Oct 13 08:45 output.list
[2025-10-13 09:38:22] -rw-r--r--. 1 boincer umatlas       620 Oct 13 08:45 runtime_log
[2025-10-13 09:38:22] -rw-------. 1 boincer umatlas   3164160 Oct 13 08:45 result.tar.gz
[2025-10-13 09:38:22] -rw-r--r--. 1 boincer umatlas      8694 Oct 13 08:45 runtime_log.err
[2025-10-13 09:38:22] -rw-------. 1 boincer umatlas       655 Oct 13 08:45 4akMDmNvJS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmHCVMDmteUgRo.diag
[2025-10-13 09:38:22] -rw-r--r--. 1 boincer umatlas      6709 Oct 13 09:38 init_data.xml
[2025-10-13 09:38:22] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 09:38 boinc_mmap_file
[2025-10-13 09:38:22] -rw-r--r--. 1 boincer umatlas        28 Oct 13 09:38 wrapper_checkpoint.txt
[2025-10-13 09:38:22] -rw-r--r--. 1 boincer umatlas     21050 Oct 13 09:38 stderr.txt
[2025-10-13 09:38:23] HITS file was successfully produced:
[2025-10-13 09:38:23] -rw-------. 1 boincer umatlas 196565099 Oct 13 08:43 shared/HITS.pool.root.1
[2025-10-13 09:38:23]  *** Contents of shared directory: ***
[2025-10-13 09:38:23] total 410988
[2025-10-13 09:38:23] -rw-r--r--. 2 boincer umatlas 220516996 Oct 13 00:01 ATLAS.root_0
[2025-10-13 09:38:23] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 00:01 start_atlas.sh
[2025-10-13 09:38:23] -rw-r--r--. 2 boincer umatlas    569682 Oct 13 00:01 input.tar.gz
[2025-10-13 09:38:23] -rw-------. 1 boincer umatlas 196565099 Oct 13 08:43 HITS.pool.root.1
[2025-10-13 09:38:23] -rw-------. 1 boincer umatlas   3164160 Oct 13 08:45 result.tar.gz
09:38:24 (2358227): run_atlas exited; CPU time 52968.056846
09:38:24 (2358227): called boinc_finish(0)

</stderr_txt>
]]>

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